Clone Name
basd3h14
Clone Library Name
barley_pub
>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III|
Length = 547
Score = 34.7 bits (78), Expect = 0.21
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Frame = +1
Query: 76 LGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKM-SLQEPKAGGAFAKLGNNT 252
LG ++ + S+ +++SS + TSS P S +T + M SL + G F+K
Sbjct: 380 LGSFDESILGSSPINRLSSSFKQYTSSLKSPGLSTRTSSTMNSLNSSRFGAYFSK----- 434
Query: 253 SIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXKDAVVSNGVIPST 432
S V G +S T TS + PS ++AV S+ P+T
Sbjct: 435 ---SRYVEGSGSMSTTPLATSVNNSYKLPS------------GFSVREEAVFSS---PTT 476
Query: 433 SGGGPVSSEKMK 468
G PVS ++K
Sbjct: 477 EGSRPVSLARLK 488
>TIR3_YEAST (P40552) Cell wall protein TIR3 precursor|
Length = 269
Score = 34.3 bits (77), Expect = 0.27
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSN- 180
AA+ +E+++A +S AA+ + ++ G + ++ + ASS +SS ASS+
Sbjct: 170 AASSSASESSSAASSSASEAAKSSSSAKSSGSSAASSAASSASSKASSAASSSAKASSSA 229
Query: 181 -QTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGL 291
++ S K GA +G ++ V + ++G A +
Sbjct: 230 EKSTNSSSSATSKNAGAAMDMGFFSAGVGAAIAGAAAM 267
>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich|
protein 1)
Length = 254
Score = 33.5 bits (75), Expect = 0.47
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Frame = +1
Query: 13 DGKAETAAAPQNSVLP----AAQKALGPQNDGVTLST--KSKQVASSNHKETSSSGQPAS 174
+G A ++AAP +S P A + P + + S+ KS A S+ + SSS P+S
Sbjct: 110 NGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSSEAKSSSAAPSS 169
Query: 175 SNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTS 315
S AK S P + A + +S + + S A S T +TS
Sbjct: 170 SE---AKSSSAAPSSSEAKSSSAAPSSTEAKITS--AAPSSTGAKTS 211
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic|
region
Length = 551
Score = 33.5 bits (75), Expect = 0.47
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Frame = +1
Query: 40 PQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSG----QPASSNQTMAKMSLQ 207
PQ+S L L + ++ S +SS+ + TSSS P+SS+ T+ S
Sbjct: 87 PQSSSLLTLSSTLSSELSSSSMQVSSSSTSSSSSEVTSSSSSSSISPSSSSSTIISSSSS 146
Query: 208 EPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXX 387
P F ++++ SS +S + L +S S+ S +L+
Sbjct: 147 LP----TFTVASTSSTVASSTLSTSSSL-VISTSSSTFTFSSESSSSLISSSISTSVS-- 199
Query: 388 XXKDAVVSNGVIPSTSGGGPVSSEKMKDLTGS 483
S+ +PS+S P SS +LT S
Sbjct: 200 ------TSSVYVPSSSTSSPPSSS--SELTSS 223
>LARP_DROME (Q9VAW5) La-related protein (dlarp)|
Length = 1403
Score = 33.5 bits (75), Expect = 0.47
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = +1
Query: 1 RAANDGKAETAAAPQNSVLPAAQKALGPQNDGV-TLSTKSKQVASSNHKETSSSGQPASS 177
R+ + E A P P + L ND V T +T SK +SSN+ ++ ASS
Sbjct: 700 RSKTNAIKENATTPPQQQQPPLSQTLNNNNDNVKTNNTSSKSKSSSNNAPSN-----ASS 754
Query: 178 NQTMAKMSLQEPKAGGAFAKLGN----NTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342
+ T+ + A A K T+ +++ SG A S+T ++S ++T + PS
Sbjct: 755 SATVCVTTNNASSATKATTKTTTTSTATTTTNNNIKSGNAAYSKTHSKSS-SKTAAPPS 812
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor|
Length = 995
Score = 32.3 bits (72), Expect = 1.0
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 4/150 (2%)
Frame = +1
Query: 103 LSTKSKQVASSNHKETSSSGQPASS----NQTMAKMSLQEPKAGGAFAKLGNNTSIVSSM 270
+S+ Q ASS +SS Q ASS + ++++ S + ++ ++ S VSS
Sbjct: 161 VSSSVSQSASSASDVSSSVSQSASSTSDVSSSVSQSSSSASDVSSSVSQSSSSASDVSSS 220
Query: 271 VSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPV 450
VS A S +D +S +Q+ S S + V + +++ G
Sbjct: 221 VSQSAS-STSDVSSSVSQSAS--STSGVSSSGSQSVSSASGSSSSFPQSTSSASTASGSA 277
Query: 451 SSEKMKDLTGSLKQDDHTVKALTTSKEKTL 540
+S + +T S T +S + T+
Sbjct: 278 TSNSLSSITSSASSASATASNSLSSSDGTI 307
Score = 32.0 bits (71), Expect = 1.4
Identities = 40/156 (25%), Positives = 57/156 (36%), Gaps = 5/156 (3%)
Frame = +1
Query: 103 LSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQE-PKAGGAFAKLGNNTSIVSSMVSG 279
+S+ Q ASS +SS Q ASS ++ Q A G+ + +TS S+ SG
Sbjct: 217 VSSSVSQSASSTSDVSSSVSQSASSTSGVSSSGSQSVSSASGSSSSFPQSTSSAST-ASG 275
Query: 280 PAGLSETDKQTSCAQTCSKPSLN-LVXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSS 456
A + TS A + S + N L + G + +T G +
Sbjct: 276 SATSNSLSSITSSASSASATASNSLSSSDGTIYLPTTTISGDLTLTGKVIATEGVVVAAG 335
Query: 457 EKMKDLTG---SLKQDDHTVKALTTSKEKTLLPGLE 555
K+ L G S D L K K PG E
Sbjct: 336 AKLTLLDGDKYSFSADLKVYGDLLVKKSKETYPGTE 371
>PODXL_MOUSE (Q9R0M4) Podocalyxin-like protein 1 precursor|
Length = 503
Score = 32.3 bits (72), Expect = 1.0
Identities = 27/101 (26%), Positives = 45/101 (44%)
Frame = +1
Query: 25 ETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSL 204
++ + P ++ P + ++ G V+ K+K + S+ TSSSGQ ASS
Sbjct: 75 QSPSMPTSTPNPTSNQSGGNLTSSVSEVDKTKTSSPSSTAFTSSSGQTASSG-------- 126
Query: 205 QEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQT 327
K+G +F T + ++ S P L+ T K S T
Sbjct: 127 --GKSGDSFTTAPTTTLGLINVSSQPTDLNTTSKLLSTPTT 165
>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)|
Length = 881
Score = 32.0 bits (71), Expect = 1.4
Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 11/183 (6%)
Frame = +1
Query: 16 GKAETAAAPQNSVLP--AAQKALGPQNDGVTLSTKSKQVASSNHKETS---------SSG 162
G + ++A +SV A + +D + +T + VA+S+ +S SS
Sbjct: 239 GSSTVSSASSSSVTTSYATSSSTVVSSDATSSTTTTSSVATSSSTTSSDPTSSTAAASSS 298
Query: 163 QPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342
PASS+ + + E A + A S SSMVS P S T+ +++ + S
Sbjct: 299 DPASSSAAASSSASTENAASSSSA-----ISSSSSMVSAPLS-STLTTSTASSRSVTSNS 352
Query: 343 LNLVXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSSEKMKDLTGSLKQDDHTVKALTT 522
+N V S + S+ + K+ T S+ + V + T
Sbjct: 353 VNSVKFANTTVFSAQTTSSVSAS---LSSSVAADDIQGSTSKEATSSVSEHTSIVTSATN 409
Query: 523 SKE 531
+ +
Sbjct: 410 AAQ 412
>RL22_DROME (P50887) 60S ribosomal protein L22|
Length = 299
Score = 32.0 bits (71), Expect = 1.4
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +1
Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183
AA D KA AAA + PAA K D + K A++ K+ ++ PA +
Sbjct: 59 AAKDVKAAAAAAKPAAAKPAAAKPAAASKD----AGKKAPAAAAPKKDAKAAAAPAPAKA 114
Query: 184 TMAKMSLQEPKA 219
AK + P A
Sbjct: 115 APAKKAASTPAA 126
>SP96_DICDI (P14328) Spore coat protein SP96|
Length = 600
Score = 31.6 bits (70), Expect = 1.8
Identities = 21/105 (20%), Positives = 45/105 (42%)
Frame = +1
Query: 28 TAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQ 207
T + +S L + ++ + V+ S ASS+ +++S P+SS + + S
Sbjct: 423 TGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSA 482
Query: 208 EPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342
+ + A ++ S +S S P+ + + S + + S S
Sbjct: 483 ASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSAS 527
Score = 31.2 bits (69), Expect = 2.3
Identities = 27/140 (19%), Positives = 52/140 (37%)
Frame = +1
Query: 16 GKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAK 195
G + +++P +S ++ P + + S S +SS SSS P+SS + +
Sbjct: 452 GSSAASSSPSSSAASSS-----PSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSA 506
Query: 196 MSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXX 375
S + A + +++S SS S A + T T+ A T + +
Sbjct: 507 PS-SSASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTTATTTATTATTTATTT 565
Query: 376 XXXXXXKDAVVSNGVIPSTS 435
A + +T+
Sbjct: 566 ATTTAATIATTTAATTTATT 585
>BASP_HUMAN (P80723) Brain acid soluble protein 1 (BASP1 protein) (Neuronal|
axonal membrane protein NAP-22) (22 kDa neuronal
tissue-enriched acidic protein)
Length = 226
Score = 31.6 bits (70), Expect = 1.8
Identities = 27/95 (28%), Positives = 41/95 (43%)
Frame = +1
Query: 22 AETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMS 201
AE AAAP S PAA + + K++ A+ +ET S G PAS ++ + +
Sbjct: 122 AEAAAAPAESAAPAAGEEPSKEEGE---PKKTEAPAAPAAQETKSDGAPASDSKPGSSEA 178
Query: 202 LQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDK 306
K A + ++T GPA +E K
Sbjct: 179 APSSKETPAATEAPSST----PKAQGPAASAEEPK 209
>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I|
Length = 598
Score = 31.6 bits (70), Expect = 1.8
Identities = 37/180 (20%), Positives = 60/180 (33%), Gaps = 10/180 (5%)
Frame = +1
Query: 16 GKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAK 195
GK T +AP ++ ++ ND ++ + ++ +GQ AS+
Sbjct: 229 GKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAPTTGFSFGKPAGQAASTATDKGT 288
Query: 196 MSLQEPKAGGAFAKLG-----NNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXX 360
+ G +F K N + +S + PA + +K T SKP+ N
Sbjct: 289 TTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDNKPTFSFGNTSKPTENTSTT 348
Query: 361 XXXXXXXXXXXKDAVVSNGVIPSTSGGGP-----VSSEKMKDLTGSLKQDDHTVKALTTS 525
K A +N S G P S+ K L G+ D T S
Sbjct: 349 ATSAPPLSNNTKPAEGANQTSSGFSFGKPATDTTTSTSKTGPLFGNKPADPSAKPGATAS 408
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)|
Length = 540
Score = 31.2 bits (69), Expect = 2.3
Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 7/180 (3%)
Frame = +1
Query: 49 SVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGA 228
S P + + T STK+ A+ TS+ G +NQ+ + + A G
Sbjct: 316 STPPPSSSTIKTTTKATTTSTKTTTTAAPT--ATSAPGSCPVANQSCSTQNQYACTADGK 373
Query: 229 FAKLGNNTSIVSSMVSGPAGLSETD-------KQTSCAQTCSKPSLNLVXXXXXXXXXXX 387
+A + +VSS SG + TD T TC S +
Sbjct: 374 YAVCDHGKWVVSSCPSGTVCIPTTDGTSIYCGYATGSGSTCPSASALEIAAASFGS---- 429
Query: 388 XXKDAVVSNGVIPSTSGGGPVSSEKMKDLTGSLKQDDHTVKALTTSKEKTLLPGLEQVDV 567
NG +P P + K+ D ++ +A+ ++ TL P + V +
Sbjct: 430 -------KNGPVPR-----PYKASKVAAQLAVTSTDKNSFEAVINARRTTLTPFEKSVTI 477
>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner|
cell wall protein)
Length = 238
Score = 31.2 bits (69), Expect = 2.3
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +1
Query: 7 ANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQ-VASSNHKETSSSGQPASSNQ 183
A+ G + ++A+ S A + + + STK+ ASS+ K +SSS P+SS
Sbjct: 88 ASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSSASSSTKASSSSAAPSSSKA 147
Query: 184 TMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLN 348
+ + S + A + ++++ VSS + SE ++ + T S+ +++
Sbjct: 148 SSTESSSSSSSSTKAPSSEESSSTYVSSSKQA-SSTSEAHSSSAASSTVSQETVS 201
Score = 31.2 bits (69), Expect = 2.3
Identities = 26/138 (18%), Positives = 50/138 (36%)
Frame = +1
Query: 22 AETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMS 201
A+ A + S +LG + + S S ASS+ K +SSS ++ + + S
Sbjct: 72 ADAAYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASSSTKASSSSASS 131
Query: 202 LQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXX 381
+ + A +S SS S + + + +++S S +
Sbjct: 132 STKASSSSAAPSSSKASSTESSSSSSSSTKAPSSEESSSTYVSSSKQASSTSEAHSSSAA 191
Query: 382 XXXXKDAVVSNGVIPSTS 435
VS+ + ST+
Sbjct: 192 SSTVSQETVSSALPTSTA 209
>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo|
red hypersensitive protein 1)
Length = 507
Score = 31.2 bits (69), Expect = 2.3
Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 9/172 (5%)
Frame = +1
Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183
+++ + +++ ++V + + S+ S V+SS+ +SSS P+SS
Sbjct: 304 SSSTSSSTVSSSASSTVSSSVSSTVSSSASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTA 363
Query: 184 TMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQ----TCSKPSLNL 351
T +K ++ SS V+ + +S +KQ+S + S S ++
Sbjct: 364 TSSK-------------------TLASSSVTTSSSISSFEKQSSSSSKKTVASSSTSESI 404
Query: 352 VXXXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSSE-----KMKDLTGSLKQ 492
+ + V S S PV + D+T S Q
Sbjct: 405 ISSTKTPATVSSTTRSTVAPTTQQSSVSSDSPVQDKGGVATSSNDVTSSTTQ 456
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac|
Length = 1120
Score = 31.2 bits (69), Expect = 2.3
Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 8/153 (5%)
Frame = +1
Query: 22 AETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQT----- 186
A A+A + A + A +T + A S ++S+GQ ASS Q+
Sbjct: 114 ARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASSAQSASSSA 173
Query: 187 -MAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTS--CAQTCSKPSLNLVX 357
A E A A+ + + S +G A SET+ S A T + +
Sbjct: 174 GTASTKATEASKSAAAAESSKSAAATS---AGAAKTSETNASASLQSAATSASTATTKAS 230
Query: 358 XXXXXXXXXXXXKDAVVSNGVIPSTSGGGPVSS 456
K+A S+ S+S SS
Sbjct: 231 EAATSARDAAASKEAAKSSETNASSSASSAASS 263
>RTOA_DICDI (P54681) Protein rtoA (Ratio-A)|
Length = 400
Score = 30.8 bits (68), Expect = 3.0
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +1
Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183
++N G +E+++ NS ++ + G N G S+ S S + +S+SG +SS
Sbjct: 213 SSNSG-SESSSGSSNS---GSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGS 268
Query: 184 TMA-KMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLV 354
+ + S G+ + +N+ SS SG S +D +T+C S+N V
Sbjct: 269 SNSGSESSSGSSNSGSESSGSSNSGSESSSDSG----SSSDGKTTCISFHDTLSINTV 322
>KCNN1_MOUSE (Q9EQR3) Small conductance calcium-activated potassium channel|
protein 1 (SK1)
Length = 580
Score = 30.8 bits (68), Expect = 3.0
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +1
Query: 16 GKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAK 195
G + +PQ + GPQ T S + +QVA S+H S GQP S
Sbjct: 7 GDVQPLLSPQVHSEALLRNHAGPQRACCTPSPR-RQVAMSSHSHNGSVGQPLGSGPGFLG 65
Query: 196 MSLQEPKAG 222
+P+AG
Sbjct: 66 WEPVDPEAG 74
>BSN_RAT (O88778) Bassoon protein|
Length = 3937
Score = 30.8 bits (68), Expect = 3.0
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 RAANDGKAETAA-APQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASS 177
RA G ++ AA APQ P AQ A GP +K A + +GQPA+
Sbjct: 3851 RAEQAGSSKPAAKAPQQGRAPQAQSAPGPAG--------AKTGARPGGTPGAPAGQPAAE 3902
Query: 178 NQTMAKMSLQEPKAGGAFAKLGNNTSIVSS 267
+++ L GGA + G T VS+
Sbjct: 3903 GESVFSKIL----PGGAAEQAGKLTEAVSA 3928
>OSH2_YEAST (Q12451) Oxysterol-binding protein homolog 2|
Length = 1283
Score = 30.4 bits (67), Expect = 4.0
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 100 TLSTKSKQVASSNHKETSSSGQPASS--NQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMV 273
+L+ K+K A +H +T S AS T+ K +Q P + + + NN S+VSS +
Sbjct: 403 SLALKNKSPALISHSKTQGSLPEASQYYQHTLHKEVIQ-PSSVSLYRRPSNNLSVVSSEI 461
Query: 274 SGPAGLSETDKQ 309
L+E+ K+
Sbjct: 462 QLNDNLTESGKR 473
>SP4_MOUSE (Q62445) Transcription factor Sp4|
Length = 782
Score = 30.4 bits (67), Expect = 4.0
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 25 ETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSS-SGQPASSNQTMAKMS 201
+ + P S PA+ P + +T S + SS+ +S+ +GQ AS++ + ++ +
Sbjct: 297 QLVSTPTTSTAPASTMPESPSSSTTCTTTASTTLTSSDTLVSSADTGQYASTSASSSERT 356
Query: 202 LQEPKAGGAFAKLGNNTSIVSS 267
++EP+ A ++S + S
Sbjct: 357 IEEPQTPAATESEAQSSSQLQS 378
>MERL_MOUSE (P46662) Merlin (Moesin-ezrin-radixin-like protein)|
(Neurofibromin-2) (Schwannomin)
Length = 596
Score = 30.0 bits (66), Expect = 5.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 139 HKETSSSGQPASSNQTMAKMSLQEPKAGGAF 231
H E+S G P+S + T+ K++LQ K+ AF
Sbjct: 562 HSESSDRGGPSSKHNTIKKLTLQSAKSRVAF 592
>MAGD1_RAT (Q9ES73) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
(Neurotrophin receptor-interacting MAGE homolog)
(Sertoli cell necdin-related gene 1) (SNERG-1)
Length = 775
Score = 30.0 bits (66), Expect = 5.2
Identities = 29/104 (27%), Positives = 46/104 (44%)
Frame = +1
Query: 31 AAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQE 210
AA+ S ++ A QN +TK+ A+ N ++ S+ + ++ AK
Sbjct: 133 AASTGKSAAKKSEMAFKGQNT----TTKAGPSATYNFTQSPSANEMTNNQPKTAKAWNDT 188
Query: 211 PKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQTCSKPS 342
K GA A+ N + V AG+SETD + AQT + S
Sbjct: 189 TKIPGADAQTQNVNQAKMADVGTSAGISETD--GAAAQTSADGS 230
>ADG3_SCHPO (O74851) Protein adg3 precursor|
Length = 1131
Score = 30.0 bits (66), Expect = 5.2
Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 10/182 (5%)
Frame = +1
Query: 73 ALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGAFAKLGNNT 252
++GP + T ++ S S + KETSS PA + T++ S +
Sbjct: 640 SVGPSSSQTTPTSSSSITGSQSLKETSS---PAYVSSTVSYTS----------------S 680
Query: 253 SIVSSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXK----------DA 402
S+ SS G S +D Q+ T S P+ + + DA
Sbjct: 681 SVDSSSTYNSTGSSSSDSQSFSGTTYSDPTTTITSEVSSILSSPTSMQSSVSRPQSSGDA 740
Query: 403 VVSNGVIPSTSGGGPVSSEKMKDLTGSLKQDDHTVKALTTSKEKTLLPGLEQVDVGKQIS 582
N + S S + + S + + TS + P + Q + +S
Sbjct: 741 SGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPTITQSSISTSVS 800
Query: 583 SQ 588
SQ
Sbjct: 801 SQ 802
>HPT_PIG (Q8SPS7) Haptoglobin precursor [Contains: Haptoglobin alpha chain;|
Haptoglobin beta chain]
Length = 347
Score = 30.0 bits (66), Expect = 5.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 387 ESLCGKPGNRANQVQAWLGTCLSARSLF 304
E++CGKP N +QVQ +G L A+ F
Sbjct: 87 EAVCGKPKNPVDQVQRIMGGSLDAKGSF 114
>ATC3_YEAST (P39524) Probable phospholipid-transporting ATPase DRS2 (EC|
3.6.3.1)
Length = 1355
Score = 30.0 bits (66), Expect = 5.2
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 40 PQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKA 219
P + VLP L +D + S+NH + +S + SL+ K
Sbjct: 49 PPSHVLPEETIDLDADDDNIENDVHENLFMSNNHDDQTSWNANRFDSDAYQPQSLRAVKP 108
Query: 220 GGAFAKLGN 246
G FA+ GN
Sbjct: 109 PGLFARFGN 117
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)|
Length = 929
Score = 30.0 bits (66), Expect = 5.2
Identities = 21/87 (24%), Positives = 34/87 (39%)
Frame = +1
Query: 10 NDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTM 189
ND + PQ + P A LG D E +GQ AS+N+
Sbjct: 30 NDTSLKQTKRPQKAAPPQALDFLGGDID------------DDEDDEAFIAGQQASANRKA 77
Query: 190 AKMSLQEPKAGGAFAKLGNNTSIVSSM 270
+ + + K GG F +G N ++ ++
Sbjct: 78 SNLKGRTVKKGGGFQAMGLNAHLLKAI 104
>VTS1_CANGA (Q6FM94) Protein VTS1|
Length = 549
Score = 30.0 bits (66), Expect = 5.2
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +1
Query: 4 AANDGKAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQ 183
A N+ N + +A + +TL+ ++ +S++ SSSG ASSN
Sbjct: 405 ANNNNIGSNNTKRMNDITNSADVPVTSSFQNLTLNNQNGSTTTSSNNGNSSSG--ASSNS 462
Query: 184 TMAKMSLQEPK 216
+M SL +PK
Sbjct: 463 SMNPKSLTDPK 473
>OTX1_HUMAN (P32242) Homeobox protein OTX1|
Length = 354
Score = 29.6 bits (65), Expect = 6.7
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Frame = +1
Query: 28 TAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASS-------NQT 186
T + P +++ G ++ G ASS+ +SSS PA++ N
Sbjct: 103 TKSRPAKKKSSPVRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAGLGGNPV 162
Query: 187 MAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSETDKQTSCAQ 324
A SL P A ++ + + VS P L+ TSC Q
Sbjct: 163 AAASSLSTPAASSIWSPASISPGSAPASVSVPEPLA-APSNTSCMQ 207
>GP149_CHICK (Q9DDD1) Probable G-protein coupled receptor 149 (G-protein coupled|
receptor R35)
Length = 723
Score = 29.6 bits (65), Expect = 6.7
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 121 QVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVSGPAGLSET 300
+++ +H + N + + + P+ GG A L S S GPAGLS T
Sbjct: 407 RISPESHHHDGDGKSTSCHNLLVCEKPYEPPRGGGGGAALAE-LSTTDSARPGPAGLSAT 465
Query: 301 D 303
D
Sbjct: 466 D 466
>TGM3_MOUSE (Q08189) Protein-glutamine gamma-glutamyltransferase E precursor|
(EC 2.3.2.13) (TGase E) (TGE) (TG(E))
(Transglutaminase-3) [Contains: Protein-glutamine
gamma-glutamyltransferase E 50 kDa noncatalytic chain;
Protein-glutamine gamma-glutamyltra
Length = 693
Score = 29.6 bits (65), Expect = 6.7
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 151 SSSGQPASSNQTMAKMSLQEPKAGGAFAKL----GNNTSI-VSSMVSGPAGL 291
S+ QP+ S +T A S+ GG A L GNN +I ++S VS P GL
Sbjct: 59 STGPQPSESARTKAVFSISGRSTGGWNAALKANSGNNLAIAIASPVSAPIGL 110
>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2|
Length = 1422
Score = 29.6 bits (65), Expect = 6.7
Identities = 34/155 (21%), Positives = 49/155 (31%)
Frame = +1
Query: 82 PQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIV 261
PQ G L+T S + +S+ GQ + K +L A G A L +
Sbjct: 869 PQTSGKQLTTGSVVQGTLGVSTSSAQGQQTLKVISGQKTTLFTQAAHGGQASLMKISD-- 926
Query: 262 SSMVSGPAGLSETDKQTSCAQTCSKPSLNLVXXXXXXXXXXXXXKDAVVSNGVIPSTSGG 441
T K SKP ++ A+ +NG + G
Sbjct: 927 -----------STLKTVPATSQLSKPGTTMLRVAGGVITTATSPAVALSANGPAQQSEGM 975
Query: 442 GPVSSEKMKDLTGSLKQDDHTVKALTTSKEKTLLP 546
PVSS + +T + Q V T K P
Sbjct: 976 APVSSSTVSSVTKTSGQQQVCVSQATVGTCKAATP 1010
>OSP_DROME (Q27421) Protein outspread|
Length = 1553
Score = 29.6 bits (65), Expect = 6.7
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 43 QNSVLPAAQK--ALGPQNDG-VTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQEP 213
+++ LP Q +L P ++G +TLSTK SS HK+T +S Q A + + +
Sbjct: 184 RSATLPGGQVVGSLRPTSNGDLTLSTKLGNRHSSYHKDTLTSSQSAGNLLSSLDLGPSST 243
Query: 214 KAGGA 228
K G+
Sbjct: 244 KTAGS 248
>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)|
Length = 220
Score = 29.3 bits (64), Expect = 8.8
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Frame = +1
Query: 4 AANDGKAETAAAPQNSVLPAAQ-KALGPQNDGVTLSTKS-------KQVASSNHKETSSS 159
+++ A +AA QNS + A G +N+ + S+ + QV +++ ++SSS
Sbjct: 112 SSSSSSASNSAAAQNSASSSETINADGSENESSSSSSSAAQNSATRSQVINADGSQSSSS 171
Query: 160 GQPASSNQTMAKMSLQEPKAGGAFAKLGNNTSIVSSMVS 276
++SNQ A S A G+ ++ +++S SS S
Sbjct: 172 SSSSASNQASATSS-SSVSADGSESESSSSSSSSSSSSS 209
>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor|
Length = 1783
Score = 29.3 bits (64), Expect = 8.8
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +1
Query: 31 AAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKMSLQE 210
A+AP S+ A+ A+G + S + + A+ + + + PA+S A
Sbjct: 658 ASAPTTSLASASGPAIGTSSSNAHSSAAASEAAAGTVRAPTDTAAPAASPAATAPALAST 717
Query: 211 PKAGGAFAKLGNNTSIVSS 267
P A A A L +V++
Sbjct: 718 PFATPAAAPLPEPPEVVAA 736
>ITBP1_PONPY (Q5R5S7) Integrin beta-1-binding protein 1|
Length = 200
Score = 29.3 bits (64), Expect = 8.8
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 19 KAETAAAPQNSVLPAAQKALGPQNDGVTLSTKSKQVASSNHKETSSSGQPASSNQTMAKM 198
K ++++ Q+S + K++ G++ +S VAS + T SSGQ S++ T A+
Sbjct: 7 KRHSSSSSQSSEISTKSKSVDSSLGGLS---RSSTVASLDTDSTKSSGQSNSNSDTCAEF 63
Query: 199 SLQEPKAGGAFAKL 240
+ K GA KL
Sbjct: 64 RI---KYVGAIEKL 74
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.300 0.117 0.304
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,325,423
Number of Sequences: 219361
Number of extensions: 1658653
Number of successful extensions: 3192
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3170
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)