>ref|XM_479168.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1859

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 504 gcagcaaagtttcagcacagatgtatcatttctaggcgctggcaaggatggtga 557
           |||||||||||||||||| ||||| |||||||||||   || ||||||||||||
Sbjct: 438 gcagcaaagtttcagcacggatgtctcatttctaggatttgacaaggatggtga 491



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 133/169 (78%)
 Strand = Plus / Plus

                                                                       
Query: 303 tctagctccaggaaacacatacccagtgcatgactatctctatgagccatctctggaacc 362
           ||||| ||||| |||||  ||||||| ||| || ||||||||||| || || ||||| ||
Sbjct: 237 tctagttccagcaaacatttacccagcgcaggattatctctatgaaccgtccctggagcc 296

                                                                       
Query: 363 agactttccatctgaatatggtgcaagagaagatccgttccctacagctcaagctagttc 422
           ||| || ||||| || || | | | ||||||||||| ||   | || | | |||||||||
Sbjct: 297 agatttcccatcggagtacgattctagagaagatccatttgttccaacacgagctagttc 356

                                                            
Query: 423 aactatcaatctgaagaccgttctaggtggtcttgctgcgattgtttcg 471
           || ||||||| ||||||| || |||  ||| || ||||| |||||||||
Sbjct: 357 aaatatcaatttgaagactgtcctaactgggctggctgctattgtttcg 405



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 207 tctacatgattccatggagaccccaaatgatttgatgtcgtactcatccctctccaaaat 266
           |||| ||||||| |||| | |||| |||||  |||  |||||||| ||||||||||||||
Sbjct: 144 tctaaatgattctatgggggccccgaatgaagtgacatcgtactcttccctctccaaaat 203

                  
Query: 267 caatagc 273
           | |||||
Sbjct: 204 cgatagc 210

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                      
Query: 504      gcagcaaagtttcagcacagatgtatcatttctaggcgctggcaaggatggtga 557
                |||||||||||||||||| ||||| |||||||||||   || ||||||||||||
Sbjct: 25383240 gcagcaaagtttcagcacggatgtctcatttctaggatttgacaaggatggtga 25383293



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 133/169 (78%)
 Strand = Plus / Plus

                                                                            
Query: 303      tctagctccaggaaacacatacccagtgcatgactatctctatgagccatctctggaacc 362
                ||||| ||||| |||||  ||||||| ||| || ||||||||||| || || ||||| ||
Sbjct: 25383039 tctagttccagcaaacatttacccagcgcaggattatctctatgaaccgtccctggagcc 25383098

                                                                            
Query: 363      agactttccatctgaatatggtgcaagagaagatccgttccctacagctcaagctagttc 422
                ||| || ||||| || || | | | ||||||||||| ||   | || | | |||||||||
Sbjct: 25383099 agatttcccatcggagtacgattctagagaagatccatttgttccaacacgagctagttc 25383158

                                                                 
Query: 423      aactatcaatctgaagaccgttctaggtggtcttgctgcgattgtttcg 471
                || ||||||| ||||||| || |||  ||| || ||||| |||||||||
Sbjct: 25383159 aaatatcaatttgaagactgtcctaactgggctggctgctattgtttcg 25383207



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 207      tctacatgattccatggagaccccaaatgatttgatgtcgtactcatccctctccaaaat 266
                |||| ||||||| |||| | |||| |||||  |||  |||||||| ||||||||||||||
Sbjct: 25382946 tctaaatgattctatgggggccccgaatgaagtgacatcgtactcttccctctccaaaat 25383005

                       
Query: 267      caatagc 273
                | |||||
Sbjct: 25383006 cgatagc 25383012

>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1056G08
          Length = 168173

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 504   gcagcaaagtttcagcacagatgtatcatttctaggcgctggcaaggatggtga 557
             |||||||||||||||||| ||||| |||||||||||   || ||||||||||||
Sbjct: 76330 gcagcaaagtttcagcacggatgtctcatttctaggatttgacaaggatggtga 76383



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 133/169 (78%)
 Strand = Plus / Plus

                                                                         
Query: 303   tctagctccaggaaacacatacccagtgcatgactatctctatgagccatctctggaacc 362
             ||||| ||||| |||||  ||||||| ||| || ||||||||||| || || ||||| ||
Sbjct: 76129 tctagttccagcaaacatttacccagcgcaggattatctctatgaaccgtccctggagcc 76188

                                                                         
Query: 363   agactttccatctgaatatggtgcaagagaagatccgttccctacagctcaagctagttc 422
             ||| || ||||| || || | | | ||||||||||| ||   | || | | |||||||||
Sbjct: 76189 agatttcccatcggagtacgattctagagaagatccatttgttccaacacgagctagttc 76248

                                                              
Query: 423   aactatcaatctgaagaccgttctaggtggtcttgctgcgattgtttcg 471
             || ||||||| ||||||| || |||  ||| || ||||| |||||||||
Sbjct: 76249 aaatatcaatttgaagactgtcctaactgggctggctgctattgtttcg 76297



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 207   tctacatgattccatggagaccccaaatgatttgatgtcgtactcatccctctccaaaat 266
             |||| ||||||| |||| | |||| |||||  |||  |||||||| ||||||||||||||
Sbjct: 76036 tctaaatgattctatgggggccccgaatgaagtgacatcgtactcttccctctccaaaat 76095

                    
Query: 267   caatagc 273
             | |||||
Sbjct: 76096 cgatagc 76102

>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0552F09
          Length = 134659

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 504  gcagcaaagtttcagcacagatgtatcatttctaggcgctggcaaggatggtga 557
            |||||||||||||||||| ||||| |||||||||||   || ||||||||||||
Sbjct: 6957 gcagcaaagtttcagcacggatgtctcatttctaggatttgacaaggatggtga 7010



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 133/169 (78%)
 Strand = Plus / Plus

                                                                        
Query: 303  tctagctccaggaaacacatacccagtgcatgactatctctatgagccatctctggaacc 362
            ||||| ||||| |||||  ||||||| ||| || ||||||||||| || || ||||| ||
Sbjct: 6756 tctagttccagcaaacatttacccagcgcaggattatctctatgaaccgtccctggagcc 6815

                                                                        
Query: 363  agactttccatctgaatatggtgcaagagaagatccgttccctacagctcaagctagttc 422
            ||| || ||||| || || | | | ||||||||||| ||   | || | | |||||||||
Sbjct: 6816 agatttcccatcggagtacgattctagagaagatccatttgttccaacacgagctagttc 6875

                                                             
Query: 423  aactatcaatctgaagaccgttctaggtggtcttgctgcgattgtttcg 471
            || ||||||| ||||||| || |||  ||| || ||||| |||||||||
Sbjct: 6876 aaatatcaatttgaagactgtcctaactgggctggctgctattgtttcg 6924



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                        
Query: 207  tctacatgattccatggagaccccaaatgatttgatgtcgtactcatccctctccaaaat 266
            |||| ||||||| |||| | |||| |||||  |||  |||||||| ||||||||||||||
Sbjct: 6663 tctaaatgattctatgggggccccgaatgaagtgacatcgtactcttccctctccaaaat 6722

                   
Query: 267  caatagc 273
            | |||||
Sbjct: 6723 cgatagc 6729

>dbj|AK071047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077A06, full
           insert sequence
          Length = 1859

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 504 gcagcaaagtttcagcacagatgtatcatttctaggcgctggcaaggatggtga 557
           |||||||||||||||||| ||||| |||||||||||   || ||||||||||||
Sbjct: 438 gcagcaaagtttcagcacggatgtctcatttctaggatttgacaaggatggtga 491



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 207 tctacatgattccatggagaccccaaatgatttgatgtcgtactcatccctctccaaaat 266
           |||| ||||||| |||| | |||| |||||  |||  |||||||| ||||||||||||||
Sbjct: 144 tctaaatgattctatgggggccccgaatgaagtgacatcgtactcttccctctccaaaat 203

                  
Query: 267 caatagc 273
           | |||||
Sbjct: 204 cgatagc 210



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 414 agctagttcaactatcaatctgaagaccgttctaggtggtcttgctgcgattgtttcg 471
           ||||||||||| ||||||| ||||||| || |||  ||| || ||||| |||||||||
Sbjct: 348 agctagttcaaatatcaatttgaagactgtcctaactgggctggctgctattgtttcg 405

>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                         
Query: 428   tcaatctgaagaccgttctaggtggtcttgctgcgattgtttcgcgtccaagcaagattg 487
             ||||||| || || |||||||||||||| | | |||||||| |  ||  || ||||| ||
Sbjct: 39889 tcaatctaaatactgttctaggtggtctggtttcgattgttacaggtgtaaacaagagtg 39948

                                                           
Query: 488   gggatgatgcatcacggcagcaaagtttcagcacagatgtatcatt 533
              |||||||||||| | |||  ||||||| ||||||||  |||||||
Sbjct: 39949 aggatgatgcatcgcagcatgaaagttttagcacagacatatcatt 39994

>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                         
Query: 428   tcaatctgaagaccgttctaggtggtcttgctgcgattgtttcgcgtccaagcaagattg 487
             ||||||| || || |||||||||||||| | | |||||||| |  ||  || ||||| ||
Sbjct: 20541 tcaatctaaatactgttctaggtggtctggtttcgattgttacaggtgtaaacaagagtg 20600

                                                           
Query: 488   gggatgatgcatcacggcagcaaagtttcagcacagatgtatcatt 533
              |||||||||||| | |||  ||||||| ||||||||  |||||||
Sbjct: 20601 aggatgatgcatcgcagcatgaaagttttagcacagacatatcatt 20646

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 139     gcccccgccgatccggcgcgc 159
               |||||||||||||||||||||
Sbjct: 1387730 gcccccgccgatccggcgcgc 1387710

>gb|AC102517.7| Mus musculus chromosome 5, clone RP24-491H24, complete sequence
          Length = 186022

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 192    tatatgagtgctgtatctacatgat 216
              |||||||||||| ||||||||||||
Sbjct: 164590 tatatgagtgctctatctacatgat 164614

>ref|XM_428888.1| PREDICTED: Gallus gallus similar to Contactin associated
           protein-like 4 precursor (Cell recognition molecule
           Caspr4) (LOC431337), partial mRNA
          Length = 1945

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 514 ttcagcacagatgtatcattt 534
           |||||||||||||||||||||
Sbjct: 302 ttcagcacagatgtatcattt 322

>gb|AC121837.2| Mus musculus BAC clone RP24-74E24 from 5, complete sequence
          Length = 179290

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 192    tatatgagtgctgtatctacatgat 216
              |||||||||||| ||||||||||||
Sbjct: 116039 tatatgagtgctctatctacatgat 116015

>gb|AC123819.2| Mus musculus BAC clone RP23-460M11 from chromosome 8, complete sequence
          Length = 202899

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    tcttcccccttccatctttg 62
             ||||||||||||||||||||
Sbjct: 59155 tcttcccccttccatctttg 59174

>gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete sequence
          Length = 116833

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   gtgcatgactatctctatga 347
             ||||||||||||||||||||
Sbjct: 23324 gtgcatgactatctctatga 23305



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  gtgcatgactatctctatga 347
            ||||||||||||||||||||
Sbjct: 5082 gtgcatgactatctctatga 5063

>gb|AC119419.9| Medicago truncatula clone mth2-6b12, complete sequence
          Length = 106395

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gtgcatgactatctctatga 347
           ||||||||||||||||||||
Sbjct: 604 gtgcatgactatctctatga 585

>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence
          Length = 134155

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  gtgcatgactatctctatga 347
            ||||||||||||||||||||
Sbjct: 9160 gtgcatgactatctctatga 9179

>gb|AC134823.41| Medicago truncatula clone mth2-20d18, complete sequence
          Length = 119033

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   gtgcatgactatctctatga 347
             ||||||||||||||||||||
Sbjct: 14052 gtgcatgactatctctatga 14071

>emb|AL590452.12| Human DNA sequence from clone RP11-326G21 on chromosome 1 Contains the 5'
              end of the PDE4DIP gene for phosphodiesterase 4D
              interacting protein (myomegalin) and a CpG island, complete
              sequence
          Length = 156813

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    cctccaaaccctcctgcccc 143
              ||||||||||||||||||||
Sbjct: 151782 cctccaaaccctcctgcccc 151763

>emb|AL162399.12| Human DNA sequence from clone RP11-545I10 on chromosome 1 Contains the
             5' end of a novel gene, the gene for NTKL-binding protein
             1 and a novel gene, complete sequence
          Length = 91639

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   gctgtatctacatgattcca 220
             ||||||||||||||||||||
Sbjct: 84825 gctgtatctacatgattcca 84844

>emb|CR931728.1| Medicago truncatula chromosome 5 clone mth2-175g3, COMPLETE SEQUENCE
          Length = 115300

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   gtgcatgactatctctatga 347
             ||||||||||||||||||||
Sbjct: 57377 gtgcatgactatctctatga 57358

>gb|AC152452.3| Mus musculus BAC clone RP24-279M22 from chromosome 9, complete sequence
          Length = 176943

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   tatatgagtgctgtatctacatga 215
             |||||||||||| |||||||||||
Sbjct: 68357 tatatgagtgctctatctacatga 68380

>gb|AC183687.3| Pan troglodytes BAC clone CH251-25N14 from chromosome 1, complete
             sequence
          Length = 192054

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   cctccaaaccctcctgcccc 143
             ||||||||||||||||||||
Sbjct: 89660 cctccaaaccctcctgcccc 89641

>gb|AC092881.8| Homo sapiens 12 BAC RP11-398J13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 123532

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   tgattccatggagaccccaa 232
             ||||||||||||||||||||
Sbjct: 92759 tgattccatggagaccccaa 92740

>gb|AC015815.14| Homo sapiens chromosome 17, clone RP11-21O15, complete sequence
          Length = 129300

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ttcccccttccatctttgcc 64
             ||||||||||||||||||||
Sbjct: 78144 ttcccccttccatctttgcc 78163

>dbj|AP001855.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-892C3, complete
             sequence
          Length = 72651

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    cttcttcccccttccatctt 60
             ||||||||||||||||||||
Sbjct: 38227 cttcttcccccttccatctt 38246

>emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on chromosome 2, complete
             sequence
          Length = 212233

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   atggtgacttgcattcatct 570
             ||||||||||||||||||||
Sbjct: 92795 atggtgacttgcattcatct 92814


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,602,449
Number of Sequences: 3902068
Number of extensions: 4602449
Number of successful extensions: 81192
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 81076
Number of HSP's gapped (non-prelim): 113
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)