ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3g23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1193 bits (602), Expect = 0.0 Identities = 612/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119908 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119849 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119848 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119789 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119788 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119729 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119728 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 119670 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119669 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 119610 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119609 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 119550 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119549 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 119490 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119489 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 119430 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119429 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 119370 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119369 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 119310 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 119309 gatgttgaagaatc 119296 Score = 1193 bits (602), Expect = 0.0 Identities = 612/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94986 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95045 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95046 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95105 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95106 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95165 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95166 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 95224 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95225 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95284 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95285 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 95344 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95345 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 95404 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 95464 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95465 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 95524 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95525 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 95584 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 95585 gatgttgaagaatc 95598
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118689 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 118630 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118629 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 118570 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118569 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 118510 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118509 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 118451 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118450 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 118391 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118390 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 118331 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118330 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 118271 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118270 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 118211 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118210 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 118151 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118150 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 118091 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 118090 gatgttgaagaatc 118077
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119773 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119714 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119713 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119654 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119653 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119594 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119593 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 119535 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119534 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 119475 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119474 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 119415 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119414 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 119355 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119354 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 119295 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 119294 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 119235 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119234 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 119175 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 119174 gatgttgaagaatc 119161 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95442 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95502 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95503 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95562 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95563 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 95621 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95622 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95681 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95682 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 95741 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95742 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 95801 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95802 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 95861 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95862 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 95921 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95922 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 95981 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 95982 gatgttgaagaatc 95995
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119773 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119714 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119713 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119654 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119653 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119594 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119593 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 119535 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119534 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 119475 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119474 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 119415 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119414 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 119355 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119354 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 119295 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 119294 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 119235 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119234 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 119175 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 119174 gatgttgaagaatc 119161 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95442 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95502 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95503 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95562 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95563 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 95621 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95622 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95681 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95682 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 95741 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95742 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 95801 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95802 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 95861 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95862 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 95921 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95922 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 95981 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 95982 gatgttgaagaatc 95995
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119722 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119663 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119662 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119603 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119602 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119543 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119542 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 119484 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119483 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 119424 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119423 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 119364 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119363 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 119304 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119303 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 119244 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 119243 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 119184 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119183 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 119124 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 119123 gatgttgaagaatc 119110 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95328 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95387 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95447 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95507 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95508 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 95566 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95567 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95626 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95627 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 95686 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95687 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 95746 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95747 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 95806 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95807 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 95866 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95867 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 95926 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 95927 gatgttgaagaatc 95940
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507961 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 31508020 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508021 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 31508080 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508081 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 31508140 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31508141 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 31508199 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508200 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 31508259 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508260 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 31508319 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508320 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 31508379 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508380 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 31508439 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 31508440 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 31508499 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508500 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 31508559 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 31508560 gatgttgaagaatc 31508573
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84635 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 84576 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84575 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 84516 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84515 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 84456 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 84455 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 84397 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84396 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 84337 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84336 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 84277 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84276 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 84217 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84216 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 84157 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 84156 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 84097 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84096 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 84037 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 84036 gatgttgaagaatc 84023
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119742 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119683 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119682 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119623 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119622 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119563 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119562 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 119504 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119503 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 119444 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119443 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 119384 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119383 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 119324 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119323 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 119264 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 119263 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 119204 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119203 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 119144 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 119143 gatgttgaagaatc 119130 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95376 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95435 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95436 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95495 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95496 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95555 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95556 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 95614 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95615 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95674 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95675 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 95734 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95735 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 95794 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95795 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 95854 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95855 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 95914 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95915 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 95974 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 95975 gatgttgaagaatc 95988
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58461 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 58402 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58401 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 58342 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58341 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 58282 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 58281 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 58223 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58222 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 58163 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58162 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 58103 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58102 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 58043 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58042 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 57983 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 57982 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 57923 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57922 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 57863 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 57862 gatgttgaagaatc 57849
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268310 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9268369 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268370 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9268429 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268430 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9268489 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9268490 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 9268548 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268549 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 9268608 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268609 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 9268668 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268669 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 9268728 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268729 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 9268788 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9268789 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 9268848 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268849 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 9268908 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 9268909 gatgttgaagaatc 9268922 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227810 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9227869 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227870 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9227929 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227930 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9227989 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9227990 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 9228048 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228049 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 9228108 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228109 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 9228168 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228169 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 9228228 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228229 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 9228288 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 9228289 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctag 9228348 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228349 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 9228408 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 9228409 gatgttgaagaatc 9228422 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056224 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9056283 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056284 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9056343 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056344 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9056403 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9056404 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 9056462 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056463 aatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 9056522 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056523 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 9056582 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056583 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 9056642 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056643 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 9056702 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9056703 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 9056762 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056763 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 9056822 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 9056823 gatgttgaagaatc 9056836 Score = 1162 bits (586), Expect = 0.0 Identities = 609/614 (99%), Gaps = 2/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164399 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9164458 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164459 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9164518 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164519 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9164578 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9164579 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 9164637 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164638 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 9164697 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164698 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 9164757 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164758 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 9164817 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164818 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 9164877 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | Sbjct: 9164878 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-ctag 9164936 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164937 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 9164996 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 9164997 gatgttgaagaatc 9165010 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 290 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 349 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 350 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938295 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 19938354 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938355 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 19938414 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938415 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 19938474 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19938475 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 19938533 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938534 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 19938593 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938594 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 19938653 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938654 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 19938713 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938714 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 19938773 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 19938774 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 19938833 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938834 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 19938893 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 19938894 gatgttgaagaatc 19938907 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277136 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10277077 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277076 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10277017 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277016 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10276957 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10276956 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 10276898 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276897 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 10276838 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276837 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 10276778 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276777 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 10276718 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276717 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 10276658 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10276657 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 10276598 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276597 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 10276538 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 10276537 gatgttgaagaatc 10276524 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10387221 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10387281 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387282 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10387341 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10387342 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 10387400 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387401 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 10387460 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10387461 gcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacg 10387520 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387521 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 10387580 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387581 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 10387640 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10387641 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 10387700 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387701 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 10387760 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 10387761 gatgttgaagaatc 10387774 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 308 agtaccgtgagggaaaggtgaaaagaacccc 338 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 132 ttgtgctgctaggcgaagcggttgagtgc 160 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598477 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 31598536 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598537 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 31598596 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598597 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 31598656 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31598657 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 31598715 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598716 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 31598775 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598776 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 31598835 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598836 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 31598895 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598896 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 31598955 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 31598956 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 31599015 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599016 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 31599075 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 31599076 gatgttgaagaatc 31599089
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525793 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 33525852 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525853 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 33525912 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525913 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 33525972 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 33525973 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 33526031 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526032 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 33526091 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526092 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 33526151 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526152 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 33526211 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526212 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 33526271 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 33526272 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 33526331 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526332 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 33526391 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 33526392 gatgttgaagaatc 33526405 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 312 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 371 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 372 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 431 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 432 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 326 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 385 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 386 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 435 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 319 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 357 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47748 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 47689 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47688 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 47629 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47628 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 47569 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 47568 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 47510 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47509 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 47450 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47449 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 47390 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47389 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 47330 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47329 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 47270 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 47269 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 47210 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47209 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 47150 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 47149 gatgttgaagaatc 47136
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70990 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 71049 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71050 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 71109 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71110 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 71169 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 71170 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 71228 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71229 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 71288 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71289 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 71348 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71349 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 71408 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71409 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 71468 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 71469 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 71528 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71529 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 71588 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 71589 gatgttgaagaatc 71602 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 341 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 342 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 400 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 460 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 520 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 580 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 640 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 641 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 700 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 760 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 761 gatgttgaagaatc 774
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 128 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 188 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 248 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 249 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 307 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 367 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 427 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 487 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 547 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 548 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 607 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 608 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 667 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 668 gatgttgaagaatc 681
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949571 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 19949630 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949631 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 19949690 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949691 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 19949750 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19949751 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 19949809 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949810 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 19949869 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949870 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 19949929 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949930 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 19949989 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949990 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 19950049 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 19950050 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 19950109 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950110 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 19950169 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 19950170 gatgttgaagaatc 19950183 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283175 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10283116 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283115 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10283056 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283055 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10282996 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10282995 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 10282937 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282936 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 10282877 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282876 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 10282817 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282816 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 10282757 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282756 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 10282697 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10282696 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 10282637 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282636 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 10282577 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 10282576 gatgttgaagaatc 10282563 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393201 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10393260 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393261 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10393320 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393321 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10393380 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10393381 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 10393439 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393440 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 10393499 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10393500 gcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacg 10393559 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393560 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 10393619 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393620 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 10393679 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10393680 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 10393739 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393740 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 10393799 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 10393800 gatgttgaagaatc 10393813 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 132 ttgtgctgctaggcgaagcggttgagtgc 160 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119716 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119657 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119656 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119597 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119596 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119537 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119536 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 119478 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119477 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 119418 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119417 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 119358 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119357 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 119298 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119297 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 119238 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 119237 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 119178 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119177 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 119118 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 119117 gatgttgaagaatc 119104 Score = 1185 bits (598), Expect = 0.0 Identities = 611/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95323 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95382 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95442 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95502 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95503 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 95561 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95562 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95621 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95622 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 95681 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95682 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 95741 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95742 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 95801 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95802 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 95861 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95862 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 95921 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 95922 gatgttgaagaatc 95935
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 760 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 700 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 640 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 639 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 581 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 521 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 461 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 401 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 400 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 341 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 340 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 281 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 221 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 220 gatgttgaagaatc 207
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14150 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 14209 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14210 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 14269 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14270 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 14329 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14330 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 14388 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14389 aatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 14448 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14449 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 14508 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14509 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 14568 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14569 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 14628 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 14629 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 14688 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14689 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 14748 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 14749 gatgttgaagaatc 14762 Score = 1162 bits (586), Expect = 0.0 Identities = 609/614 (99%), Gaps = 2/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122425 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 122484 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122485 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 122544 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122545 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 122604 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122605 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 122663 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122664 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 122723 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122724 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 122783 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122784 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 122843 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122844 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 122903 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | Sbjct: 122904 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-ctag 122962 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122963 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 123022 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 123023 gatgttgaagaatc 123036
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140958 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 141017 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141018 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 141077 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141078 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 141137 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141138 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 141196 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141197 aatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 141256 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141257 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 141316 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141317 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 141376 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141377 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 141436 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 141437 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 141496 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141497 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 141556 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 141557 gatgttgaagaatc 141570
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93554 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 93613 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93614 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 93673 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93674 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 93733 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 93734 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 93792 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93793 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 93852 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 93853 gcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacg 93912 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93913 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 93972 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93973 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 94032 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 94033 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 94092 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94093 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 94152 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 94153 gatgttgaagaatc 94166
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20385 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 20444 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20445 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 20504 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20505 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 20564 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 20565 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 20623 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20624 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 20683 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20684 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 20743 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20744 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 20803 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20804 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 20863 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 20864 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 20923 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20924 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 20983 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 20984 gatgttgaagaatc 20997 Score = 1162 bits (586), Expect = 0.0 Identities = 608/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44733 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 44674 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44673 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 44614 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44613 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 44554 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 44553 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 44495 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44494 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 44435 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44434 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 44375 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44374 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 44315 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 44314 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccctccgg 44255 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 44254 agccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 44195 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44194 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 44135 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 44134 gatgttgaagaatc 44121
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1362 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 1303 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1302 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 1243 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1242 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 1183 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1182 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 1124 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1123 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 1064 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 1004 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 944 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 943 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 884 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 883 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 824 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 764 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 763 gatgttgaagaatc 750
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27618 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 27677 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27678 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 27737 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27738 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 27797 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 27798 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 27856 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27857 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 27916 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27917 gcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacg 27976 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27977 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 28036 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28037 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 28096 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 28097 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 28156 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28157 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 28216 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 28217 gatgttgaagaatc 28230
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123572 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 123513 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123512 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 123453 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123452 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 123393 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123392 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 123334 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123333 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 123274 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123273 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 123214 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123213 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 123154 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123153 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 123094 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123093 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 123034 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123033 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 122974 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 122973 gatgttgaagaatc 122960 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99265 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 99324 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99325 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 99384 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99385 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 99444 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99445 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 99503 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99504 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 99563 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99564 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 99623 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99624 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 99683 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99684 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 99743 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 99744 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 99803 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99804 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 99863 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 99864 gatgttgaagaatc 99877
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124289 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 124230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124229 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 124170 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124169 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 124110 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124109 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 124051 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124050 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 123991 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123990 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 123931 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123930 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 123871 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123870 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 123811 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123810 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 123751 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123750 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 123691 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 123690 gatgttgaagaatc 123677 Score = 1178 bits (594), Expect = 0.0 Identities = 610/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99942 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 100001 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100002 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 100061 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100062 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 100121 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100122 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 100180 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100181 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 100240 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100241 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 100300 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100301 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 100360 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100361 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 100420 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 100421 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 100480 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100481 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 100540 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 100541 gatgttgaagaatc 100554
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1162 bits (586), Expect = 0.0 Identities = 608/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241971 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9241912 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241911 cgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9241852 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241851 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9241792 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9241791 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 9241733 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241732 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 9241673 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241672 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 9241613 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241612 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 9241553 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241552 ttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccgg 9241493 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9241492 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 9241433 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9241432 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtct 9241373 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 9241372 gatgttgaagaatc 9241359 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 14 actgaaacatcttagtagccagaggaaaagaaag 47 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1162 bits (586), Expect = 0.0 Identities = 608/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53184 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 53125 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53124 cgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 53065 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53064 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 53005 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 53004 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 52946 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52945 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 52886 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52885 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 52826 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52825 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 52766 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52765 ttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccgg 52706 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52705 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 52646 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 52645 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtct 52586 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 52585 gatgttgaagaatc 52572
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1138 bits (574), Expect = 0.0 Identities = 606/614 (98%), Gaps = 2/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123511 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 123452 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123451 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 123392 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 123391 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 123332 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 123331 tccagtagc-cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgg 123274 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123273 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 123214 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123213 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 123154 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123153 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 123094 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123093 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 123034 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123033 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 122974 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122973 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 122914 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 122913 gatgttgaagaatc 122900 Score = 1138 bits (574), Expect = 0.0 Identities = 606/614 (98%), Gaps = 2/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99226 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 99285 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99286 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 99345 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 99346 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 99405 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 99406 tccagtagc-cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgg 99463 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99464 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 99523 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99524 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 99583 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99584 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 99643 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99644 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 99703 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 99704 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 99763 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99764 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 99823 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 99824 gatgttgaagaatc 99837
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1138 bits (574), Expect = 0.0 Identities = 606/614 (98%), Gaps = 2/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5579 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 5638 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5639 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 5698 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5699 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 5758 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 5759 tccagtagc-cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgg 5816 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5817 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 5876 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5877 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 5936 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5937 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 5996 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5997 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 6056 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 6057 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 6116 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6117 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 6176 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 6177 gatgttgaagaatc 6190
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1138 bits (574), Expect = 0.0 Identities = 606/614 (98%), Gaps = 2/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 226 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 227 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 286 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 287 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 346 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 347 tccagtagc-cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgg 404 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 464 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 524 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 584 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 585 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccgg 644 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 645 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 704 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 764 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 765 gatgttgaagaatc 778
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1102 bits (556), Expect = 0.0 Identities = 569/572 (99%), Gaps = 1/572 (0%) Strand = Plus / Plus Query: 43 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 103 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 163 caccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccga 222 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagc-cgaaagcatcactagcttacgctctgacccga 179 Query: 223 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 239 Query: 283 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 299 Query: 343 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 359 Query: 403 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 419 Query: 463 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 522 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 420 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 479 Query: 523 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 539 Query: 583 cagaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||||| Sbjct: 540 cagaggtccgaaccgactgatgttgaagaatc 571
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1098 bits (554), Expect = 0.0 Identities = 567/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 45 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 105 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 165 ccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagt 224 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagc-cgaaagcatcactagcttacgctctgacccgagt 179 Query: 225 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 239 Query: 285 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 299 Query: 345 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 359 Query: 405 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 419 Query: 465 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 524 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 420 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 525 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 539 Query: 585 gaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 540 gaggtccgaaccgactgatgttgaagaatc 569
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1098 bits (554), Expect = 0.0 Identities = 567/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 45 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 105 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 165 ccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagt 224 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagc-cgaaagcatcactagcttacgctctgacccgagt 179 Query: 225 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 239 Query: 285 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 299 Query: 345 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 359 Query: 405 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 419 Query: 465 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 524 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 420 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 525 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 539 Query: 585 gaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 540 gaggtccgaaccgactgatgttgaagaatc 569
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1096 bits (553), Expect = 0.0 Identities = 566/569 (99%), Gaps = 1/569 (0%) Strand = Plus / Plus Query: 46 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 106 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 166 cctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagta 225 |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagc-cgaaagcatcactagcttacgctctgacccgagta 182 Query: 226 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 242 Query: 286 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 302 Query: 346 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 362 Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 422 Query: 466 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 525 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 423 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 482 Query: 526 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 542 Query: 586 aggtccgaaccgactgatgttgaagaatc 614 ||||||||||||||||||||||||||||| Sbjct: 543 aggtccgaaccgactgatgttgaagaatc 571
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1092 bits (551), Expect = 0.0 Identities = 564/567 (99%), Gaps = 1/567 (0%) Strand = Plus / Plus Query: 48 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 108 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 168 tagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagc 227 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagc 179 Query: 228 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 239 Query: 288 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 299 Query: 348 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 359 Query: 408 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 419 Query: 468 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 527 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 420 cggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 479 Query: 528 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 539 Query: 588 gtccgaaccgactgatgttgaagaatc 614 ||||||||||||||||||||||||||| Sbjct: 540 gtccgaaccgactgatgttgaagaatc 566
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1088 bits (549), Expect = 0.0 Identities = 565/569 (99%), Gaps = 1/569 (0%) Strand = Plus / Plus Query: 46 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 106 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 166 cctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagta 225 |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagc-cgaaagcatcactagcttacgctctgacccgagta 179 Query: 226 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 Query: 286 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 Query: 346 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 Query: 466 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 525 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 420 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 479 Query: 526 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 585 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaaccaagcag 539 Query: 586 aggtccgaaccgactgatgttgaagaatc 614 ||||||||||||||||||||||||||||| Sbjct: 540 aggtccgaaccgactgatgttgaagaatc 568
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1080 bits (545), Expect = 0.0 Identities = 561/565 (99%), Gaps = 1/565 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 124 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 184 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 244 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 245 tccagtagc-cgaaagcatcgctagcttacgctctgacccgagtagcatggggcacgtgg 303 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 363 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 423 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 483 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 543 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 544 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 603 Query: 541 gtgatctatccatgaccaggatgaa 565 ||||||||||||||||||||||||| Sbjct: 604 gtgatctatccatgaccaggatgaa 628
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 983 bits (496), Expect = 0.0 Identities = 586/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134060 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 134001 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134000 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 133941 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| | || Sbjct: 133940 caatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagag 133881 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 133880 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 133822 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133821 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 133762 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 133761 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 133702 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 133701 tgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctg 133645 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133644 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 133590 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 133589 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 133530 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 133529 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 133470 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 133469 gatgttgaagaatc 133456 Score = 983 bits (496), Expect = 0.0 Identities = 586/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103911 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 103970 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103971 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104030 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| | || Sbjct: 104031 caatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagag 104090 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104091 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 104149 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104150 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 104209 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 104210 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 104269 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 104270 tgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctg 104326 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104327 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 104381 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 104382 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 104441 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 104442 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 104501 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 104502 gatgttgaagaatc 104515
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 973 bits (491), Expect = 0.0 Identities = 543/560 (96%), Gaps = 14/560 (2%) Strand = Plus / Minus Query: 60 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 75300 Query: 240 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 294 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 75299 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 75240 Query: 295 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75239 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 75180 Query: 355 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 414 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 75179 agaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcg 75128 Query: 415 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 75127 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacc 75068 Query: 475 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 534 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75067 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 75008 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75007 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 74948 Query: 595 ccgactgatgttgaagaatc 614 |||||||||||||||||||| Sbjct: 74947 ccgactgatgttgaagaatc 74928 Score = 127 bits (64), Expect = 5e-26 Identities = 64/64 (100%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75548 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 75489 Query: 61 cgta 64 |||| Sbjct: 75488 cgta 75485 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagta 30 |||||||| ||||||||||||||||||||| Sbjct: 430371 gacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 973 bits (491), Expect = 0.0 Identities = 543/560 (96%), Gaps = 14/560 (2%) Strand = Plus / Plus Query: 60 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 382238 Query: 240 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 294 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 382239 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 382298 Query: 295 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382299 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 382358 Query: 355 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 414 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 382359 agaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcg 382410 Query: 415 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 382411 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacc 382470 Query: 475 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 534 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 382471 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 382530 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382531 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 382590 Query: 595 ccgactgatgttgaagaatc 614 |||||||||||||||||||| Sbjct: 382591 ccgactgatgttgaagaatc 382610 Score = 127 bits (64), Expect = 5e-26 Identities = 64/64 (100%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381990 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 382049 Query: 61 cgta 64 |||| Sbjct: 382050 cgta 382053 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagta 30 |||||||| ||||||||||||||||||||| Sbjct: 254052 gacaacctagcgaactgaaacatcttagta 254081 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagta 30 |||||||| ||||||||||||||||||||| Sbjct: 125360 gacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 973 bits (491), Expect = 0.0 Identities = 543/560 (96%), Gaps = 14/560 (2%) Strand = Plus / Minus Query: 60 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 113391 Query: 240 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 294 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113390 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 113331 Query: 295 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113330 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 113271 Query: 355 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 414 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 113270 agaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcg 113219 Query: 415 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 113218 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacc 113159 Query: 475 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 534 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 113158 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 113099 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113098 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 113039 Query: 595 ccgactgatgttgaagaatc 614 |||||||||||||||||||| Sbjct: 113038 ccgactgatgttgaagaatc 113019 Score = 127 bits (64), Expect = 5e-26 Identities = 64/64 (100%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113639 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 113580 Query: 61 cgta 64 |||| Sbjct: 113579 cgta 113576 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagta 30 |||||||| ||||||||||||||||||||| Sbjct: 323058 gacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 973 bits (491), Expect = 0.0 Identities = 543/560 (96%), Gaps = 14/560 (2%) Strand = Plus / Minus Query: 60 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 368073 Query: 240 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 294 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 368072 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 368013 Query: 295 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368012 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 367953 Query: 355 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 414 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 367952 agaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcg 367901 Query: 415 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 367900 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacc 367841 Query: 475 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 534 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 367840 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 367781 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367780 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 367721 Query: 595 ccgactgatgttgaagaatc 614 |||||||||||||||||||| Sbjct: 367720 ccgactgatgttgaagaatc 367701 Score = 973 bits (491), Expect = 0.0 Identities = 543/560 (96%), Gaps = 14/560 (2%) Strand = Plus / Minus Query: 60 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 184678 Query: 240 gaatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtga 294 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 184677 gaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtga 184618 Query: 295 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184617 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 184558 Query: 355 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 414 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 184557 agaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcg 184506 Query: 415 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 184505 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacc 184446 Query: 475 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 534 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 184445 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 184386 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184385 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 184326 Query: 595 ccgactgatgttgaagaatc 614 |||||||||||||||||||| Sbjct: 184325 ccgactgatgttgaagaatc 184306 Score = 127 bits (64), Expect = 5e-26 Identities = 64/64 (100%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368321 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 368262 Query: 61 cgta 64 |||| Sbjct: 368261 cgta 368258 Score = 127 bits (64), Expect = 5e-26 Identities = 64/64 (100%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184926 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 184867 Query: 61 cgta 64 |||| Sbjct: 184866 cgta 184863 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 338 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagta 30 |||||||| ||||||||||||||||||||| Sbjct: 295887 gacaacctagcgaactgaaacatcttagta 295858
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 967 bits (488), Expect = 0.0 Identities = 584/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139423 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 139364 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139363 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 139304 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||| | |||||||||||||| | || Sbjct: 139303 caatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagag 139244 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 139243 tccagtagc-cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgg 139185 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139184 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 139125 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 139124 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 139065 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 139064 tgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctg 139008 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139007 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 138953 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 138952 agccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 138893 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 138892 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 138833 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 138832 gatgttgaagaatc 138819 Score = 967 bits (488), Expect = 0.0 Identities = 584/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110522 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 110581 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110582 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 110641 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||| | |||||||||||||| | || Sbjct: 110642 caatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagag 110701 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 110702 tccagtagc-cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgg 110760 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110761 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 110820 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 110821 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 110880 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 110881 tgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctg 110937 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110938 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 110992 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 110993 agccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 111052 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 111053 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 111112 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 111113 gatgttgaagaatc 111126
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 967 bits (488), Expect = 0.0 Identities = 584/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141945 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 141886 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141885 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 141826 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 141825 caatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagag 141766 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 141765 tccagtaac-cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgg 141707 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141706 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 141647 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 141646 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 141587 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 141586 tgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctg 141530 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141529 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 141475 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 141474 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 141415 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 141414 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 141355 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 141354 gatgttgaagaatc 141341 Score = 967 bits (488), Expect = 0.0 Identities = 584/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111712 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 111771 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111772 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 111831 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 111832 caatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagag 111891 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 111892 tccagtaac-cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgg 111950 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 111951 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 112010 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 112011 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 112070 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 112071 tgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctg 112127 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112128 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 112182 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 112183 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 112242 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 112243 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 112302 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 112303 gatgttgaagaatc 112316
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 967 bits (488), Expect = 0.0 Identities = 584/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127701 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 127642 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127641 catagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 127582 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 127581 caatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 127522 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 127521 tccagtagc-cgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtgg 127463 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127462 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 127403 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 127402 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 127343 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 127342 tgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctg 127286 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 127285 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaat-----ccaccgt 127231 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 127230 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 127171 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 127170 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 127111 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 127110 gatgttgaagaatc 127097 Score = 967 bits (488), Expect = 0.0 Identities = 584/614 (95%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107221 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 107280 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107281 catagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 107340 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 107341 caatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 107400 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107401 tccagtagc-cgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtgg 107459 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107460 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 107519 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 107520 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 107579 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 107580 tgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctg 107636 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107637 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaat-----ccaccgt 107691 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107692 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 107751 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 107752 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 107811 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 107812 gatgttgaagaatc 107825
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 957 bits (483), Expect = 0.0 Identities = 583/614 (94%), Gaps = 13/614 (2%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134818 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 134759 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134758 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 134699 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||| || Sbjct: 134698 caatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagag 134639 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 134638 tccagtagc-cgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtgg 134580 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134579 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 134520 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 134519 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 134460 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 134459 tgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctg 134407 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 134406 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 134352 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 134351 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 134292 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 134291 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 134232 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 134231 gatgttgaagaatc 134218 Score = 957 bits (483), Expect = 0.0 Identities = 583/614 (94%), Gaps = 13/614 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105464 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105523 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105524 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105583 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||| || Sbjct: 105584 caatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagag 105643 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 105644 tccagtagc-cgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtgg 105702 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105703 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 105762 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 105763 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 105822 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 105823 tgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctg 105875 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105876 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 105930 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 105931 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 105990 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 105991 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 106050 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 106051 gatgttgaagaatc 106064
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 946 bits (477), Expect = 0.0 Identities = 582/614 (94%), Gaps = 11/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136428 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136369 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136368 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136309 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 136308 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 136249 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 136248 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 136190 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136189 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 136130 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 136129 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 136070 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 136069 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 136015 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136014 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 135960 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 135959 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 135900 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 135899 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 135840 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 135839 gatgttgaagaatc 135826 Score = 946 bits (477), Expect = 0.0 Identities = 582/614 (94%), Gaps = 11/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105997 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106056 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106057 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106116 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 106117 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 106176 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106177 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 106235 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106236 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 106295 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106296 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106355 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106356 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106410 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106411 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 106465 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 106466 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 106525 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106526 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 106585 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 106586 gatgttgaagaatc 106599
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 936 bits (472), Expect = 0.0 Identities = 581/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132612 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 132553 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132552 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 132493 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 132492 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 132433 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132432 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 132374 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132373 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 132314 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 132313 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 132254 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 132253 tgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctg 132198 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132197 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 132143 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 132142 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 132083 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 132082 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 132023 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 132022 gatgttgaagaatc 132009 Score = 936 bits (472), Expect = 0.0 Identities = 581/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104266 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 104325 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104326 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104385 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 104386 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 104445 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104446 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 104504 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104505 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 104564 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 104565 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 104624 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 104625 tgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctg 104680 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104681 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 104735 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 104736 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 104795 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 104796 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 104855 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 104856 gatgttgaagaatc 104869
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 936 bits (472), Expect = 0.0 Identities = 581/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132605 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 132546 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132545 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 132486 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 132485 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 132426 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132425 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 132367 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132366 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 132307 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 132306 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 132247 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 132246 tgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctg 132191 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132190 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 132136 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 132135 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 132076 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 132075 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 132016 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 132015 gatgttgaagaatc 132002 Score = 936 bits (472), Expect = 0.0 Identities = 581/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104264 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 104323 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104324 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104383 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 104384 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 104443 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104444 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 104502 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 104562 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 104563 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 104622 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 104623 tgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctg 104678 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104679 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 104733 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 104734 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 104793 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 104794 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 104853 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 104854 gatgttgaagaatc 104867
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 928 bits (468), Expect = 0.0 Identities = 580/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131504 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 131445 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131444 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 131385 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 131384 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 131325 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131324 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 131266 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131265 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 131206 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 131205 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 131146 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 131145 tgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctg 131090 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131089 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 131035 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 131034 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 130975 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 130974 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 130915 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 130914 gatgttgaagaatc 130901 Score = 928 bits (468), Expect = 0.0 Identities = 580/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103131 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 103190 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103191 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 103250 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 103251 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 103310 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103311 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 103369 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103370 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 103429 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 103430 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 103489 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 103490 tgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctg 103545 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 103546 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 103600 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 103601 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 103660 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 103661 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 103720 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 103721 gatgttgaagaatc 103734
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 928 bits (468), Expect = 0.0 Identities = 580/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132835 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 132776 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132775 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 132716 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 132715 caataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 132656 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132655 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 132597 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132596 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 132537 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 132536 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 132477 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | || ||||||||||||||||| Sbjct: 132476 tgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctg 132421 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132420 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 132366 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 132365 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 132306 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 132305 gtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 132246 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 132245 gatgttgaaaaatc 132232 Score = 928 bits (468), Expect = 0.0 Identities = 580/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103929 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 103988 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103989 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104048 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 104049 caataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 104108 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104109 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 104167 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104168 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 104227 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 104228 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 104287 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | || ||||||||||||||||| Sbjct: 104288 tgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctg 104343 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104344 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 104398 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 104399 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 104458 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 104459 gtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 104518 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 104519 gatgttgaaaaatc 104532
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136078 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136077 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136018 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 136017 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 135958 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135957 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 135899 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135898 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135839 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135838 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135779 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135778 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 135724 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135723 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 135669 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 135668 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 135609 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 135608 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135549 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 135548 tgatgttgaagaatc 135534 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106493 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106552 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106553 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106612 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 106613 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 106672 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106673 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 106731 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106732 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106791 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106792 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106851 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106852 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106906 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106907 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 106961 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106962 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 107021 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 107022 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 107081 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 107082 tgatgttgaagaatc 107096
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136775 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136716 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136715 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136656 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 136655 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 136596 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 136595 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 136537 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136536 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 136477 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 136476 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 136417 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 136416 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 136362 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136361 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 136307 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 136306 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 136247 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 136246 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 136187 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 136186 tgatgttgaagaatc 136172 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106782 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106841 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106842 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106901 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 106902 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 106961 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106962 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 107020 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107021 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 107080 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 107081 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 107140 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 107141 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 107195 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107196 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 107250 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 107251 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 107310 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 107311 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 107370 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 107371 tgatgttgaagaatc 107385
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 1746 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 1806 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 1807 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 1866 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1867 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 1925 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1926 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 1985 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 1986 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 2045 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 2046 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 2100 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2101 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 2155 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 2156 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 2215 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 2216 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 2275 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 2276 tgatgttgaagaatc 2290
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135383 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135324 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135323 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135264 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135263 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135204 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135203 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 135145 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135144 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135085 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135084 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135025 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135024 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 134970 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134969 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 134915 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 134914 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 134855 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 134854 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134795 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 134794 tgatgttgaagaatc 134780 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105653 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105712 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105713 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105772 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105773 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 105832 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105833 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 105891 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105892 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105951 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 105952 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106011 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106012 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106066 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106067 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 106121 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106122 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 106181 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106182 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106241 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 106242 tgatgttgaagaatc 106256
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135518 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135459 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135458 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135399 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135398 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135339 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135338 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 135280 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135279 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135220 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135219 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135160 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135159 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 135105 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135104 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 135050 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 135049 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 134990 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 134989 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134930 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 134929 tgatgttgaagaatc 134915 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105825 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105884 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105885 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105944 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105945 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 106004 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106005 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 106063 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106064 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106123 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106124 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106183 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106184 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106238 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106239 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 106293 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106294 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 106353 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106354 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106413 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 106414 tgatgttgaagaatc 106428
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135516 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135457 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135456 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135397 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135396 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135337 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135336 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 135278 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135277 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135218 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135217 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135158 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135157 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 135103 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135102 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 135048 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 135047 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 134988 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 134987 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134928 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 134927 tgatgttgaagaatc 134913 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105822 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105881 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105882 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105941 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105942 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 106001 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106002 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 106060 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106061 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106120 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106121 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106180 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106181 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106235 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106236 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 106290 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106291 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 106350 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106351 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106410 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 106411 tgatgttgaagaatc 106425
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135428 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135369 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135368 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135309 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135308 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135249 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135248 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 135190 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135189 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135130 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135129 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135070 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135069 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 135015 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135014 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 134960 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 134959 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 134900 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 134899 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134840 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 134839 tgatgttgaagaatc 134825 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105700 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105759 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105760 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105819 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105820 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 105879 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105880 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 105938 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105939 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105998 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 105999 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106058 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106059 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106113 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106114 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 106168 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106169 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 106228 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106229 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106288 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 106289 tgatgttgaagaatc 106303
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136135 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136076 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136075 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136016 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 136015 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 135956 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135955 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 135897 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135896 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135837 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135836 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135777 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135776 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 135722 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135721 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 135667 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 135666 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 135607 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 135606 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135547 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 135546 tgatgttgaagaatc 135532 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106491 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106550 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106551 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106610 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 106611 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 106670 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106671 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 106729 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106730 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106789 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106790 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106849 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106850 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106904 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106905 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 106959 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106960 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 107019 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 107020 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 107079 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 107080 tgatgttgaagaatc 107094
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135866 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135807 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135806 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135747 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 135746 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 135687 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135686 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 135628 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135627 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135568 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135567 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135508 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135507 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 135453 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135452 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 135398 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 135397 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 135338 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 135337 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135278 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 135277 tgatgttgaagaatc 135263 Score = 924 bits (466), Expect = 0.0 Identities = 581/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106272 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106331 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106332 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106391 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 106392 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 106451 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106452 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 106510 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106511 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106570 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106571 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106630 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106631 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106685 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106686 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 106740 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106741 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 106800 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106801 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106860 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 106861 tgatgttgaagaatc 106875
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 920 bits (464), Expect = 0.0 Identities = 579/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140197 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 140138 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140137 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 140078 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||||| || ||| |||||||||||||| | || Sbjct: 140077 caatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagag 140018 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140017 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 139959 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139958 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 139899 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 139898 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 139839 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | || ||||||||||||||||| | | | | ||||||||||||||||| Sbjct: 139838 tgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctg 139783 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139782 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 139728 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 139727 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 139668 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 139667 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 139608 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 139607 gatgttgaagaatc 139594 Score = 920 bits (464), Expect = 0.0 Identities = 579/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109863 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 109922 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109923 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 109982 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||||| || ||| |||||||||||||| | || Sbjct: 109983 caatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagag 110042 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110043 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 110101 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110102 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 110161 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110162 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 110221 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | || ||||||||||||||||| | | | | ||||||||||||||||| Sbjct: 110222 tgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctg 110277 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110278 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 110332 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 110333 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 110392 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 110393 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 110452 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 110453 gatgttgaagaatc 110466
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 920 bits (464), Expect = 0.0 Identities = 579/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131628 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 131569 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131568 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 131509 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 131508 caatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaag 131449 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131448 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 131390 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131389 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 131330 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 131329 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 131270 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | ||||| |||||||||||||||| | || | ||||||||||||||| Sbjct: 131269 tgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctg 131214 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131213 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 131159 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 131158 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 131099 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 131098 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 131039 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 131038 gatgttgaagaatc 131025 Score = 920 bits (464), Expect = 0.0 Identities = 579/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101817 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 101876 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101877 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 101936 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 101937 caatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaag 101996 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101997 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 102055 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102056 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 102115 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 102116 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 102175 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | ||||| |||||||||||||||| | || | ||||||||||||||| Sbjct: 102176 tgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctg 102231 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 102232 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 102286 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 102287 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 102346 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 102347 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 102406 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 102407 gatgttgaagaatc 102420
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 920 bits (464), Expect = 0.0 Identities = 579/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133796 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 133737 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133736 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 133677 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 133676 caaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 133617 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133616 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 133558 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133557 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 133498 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 133497 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 133438 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | || ||||||||||||||||| Sbjct: 133437 tgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctg 133382 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133381 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 133327 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 133326 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 133267 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 133266 gtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 133207 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 133206 gatgttgaaaaatc 133193 Score = 920 bits (464), Expect = 0.0 Identities = 579/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104853 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 104912 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104913 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104972 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 104973 caaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 105032 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105033 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 105091 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105092 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 105151 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 105152 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 105211 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | || ||||||||||||||||| Sbjct: 105212 tgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctg 105267 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105268 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 105322 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 105323 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 105382 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 105383 gtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 105442 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 105443 gatgttgaaaaatc 105456
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 916 bits (462), Expect = 0.0 Identities = 580/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135395 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135336 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135335 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135276 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135275 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135216 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135215 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 135157 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135156 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135097 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135096 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135037 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 135036 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 134982 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 134981 gttgaagaatgagccggcgactaataggcagtggcttggttaag-----ggaacccaccg 134927 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 134926 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 134867 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 134866 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 134807 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 134806 tgatgttgaagaatc 134792 Score = 916 bits (462), Expect = 0.0 Identities = 580/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105667 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105726 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105727 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105786 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105787 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 105846 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105847 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 105905 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105906 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 105965 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 105966 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106025 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 106026 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 106080 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 106081 gttgaagaatgagccggcgactaataggcagtggcttggttaag-----ggaacccaccg 106135 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 106136 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 106195 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106196 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106255 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 106256 tgatgttgaagaatc 106270
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 912 bits (460), Expect = 0.0 Identities = 578/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 282 caaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 341 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 tccagtagc-cgagagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 400 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 460 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 461 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 520 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | || ||||||||||||||||| Sbjct: 521 tgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctg 576 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 577 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 631 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 632 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 691 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 692 gtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 751 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 752 gatgttgaaaaatc 765
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 906 bits (457), Expect = 0.0 Identities = 467/469 (99%), Gaps = 1/469 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 218 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 278 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 338 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 339 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 397 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 457 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 517 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 577 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 469 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 626
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 904 bits (456), Expect = 0.0 Identities = 577/614 (93%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106168 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106227 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106228 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106287 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | || Sbjct: 106288 caatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagag 106347 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106348 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 106406 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106407 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 106466 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106467 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106526 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||| ||||||||||||||| | | | | ||||||||||||||||| Sbjct: 106527 tgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctg 106582 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106583 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 106637 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 106638 agccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgg 106697 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106698 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 106757 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 106758 gatgttgaagaatc 106771 Score = 854 bits (431), Expect = 0.0 Identities = 576/617 (93%), Gaps = 13/617 (2%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135741 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135682 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135681 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135622 Query: 121 c-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 179 | ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | | Sbjct: 135621 caaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgaga 135562 Query: 180 gtccagtagcncgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgt 238 |||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 135561 gtccagtagc-cgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgt 135503 Query: 239 ggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccg 297 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 ggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccg 135443 Query: 298 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 357 |||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135442 atagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135383 Query: 358 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 417 || |||||||| | |||| ||||||||||||||| | | | | |||||||||||||| Sbjct: 135382 acatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgc 135327 Query: 418 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 477 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135326 ctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccac 135272 Query: 478 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 537 ||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 135271 cggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 135212 Query: 538 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 597 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135211 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135152 Query: 598 actgatgttgaagaatc 614 ||||||||||||||||| Sbjct: 135151 actgatgttgaagaatc 135135
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 904 bits (456), Expect = 0.0 Identities = 577/614 (93%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 470 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 529 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 530 tgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctg 585 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 586 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 640 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 641 agccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgg 700 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| Sbjct: 701 gtgatctatccatgaccaggatggagcttgggtgaaactaagtggaggtccgaaccgact 760 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 761 gatgttgaagaatc 774
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 904 bits (456), Expect = 0.0 Identities = 577/614 (93%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136017 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135958 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135957 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135898 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | || Sbjct: 135897 caatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagag 135838 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135837 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 135779 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135778 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135719 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135718 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135659 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||| ||||||||||||||| | | | | ||||||||||||||||| Sbjct: 135658 tgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctg 135603 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135602 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 135548 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 135547 agccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgg 135488 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 135487 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 135428 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 135427 gatgttgaagaatc 135414 Score = 904 bits (456), Expect = 0.0 Identities = 577/614 (93%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106390 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106449 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106450 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106509 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | || Sbjct: 106510 caatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagag 106569 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106570 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 106628 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 106688 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106689 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106748 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||| ||||||||||||||| | | | | ||||||||||||||||| Sbjct: 106749 tgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctg 106804 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106805 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgg 106859 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 106860 agccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgg 106919 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 106920 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 106979 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 106980 gatgttgaagaatc 106993
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 900 bits (454), Expect = 0.0 Identities = 578/615 (93%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 139341 gacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcc 139282 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139281 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 139222 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | || Sbjct: 139221 caataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatag 139162 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139161 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 139103 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139102 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 139043 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| Sbjct: 139042 gcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaaca 138983 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 138982 tgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcct 138928 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 138927 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 138873 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 138872 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 138813 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 138812 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 138753 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 138752 tgatgttgaagaatc 138738 Score = 900 bits (454), Expect = 0.0 Identities = 578/615 (93%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 109756 gacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcc 109815 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109816 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 109875 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | || Sbjct: 109876 caataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatag 109935 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 109936 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 109994 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109995 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 110054 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| Sbjct: 110055 gcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaaca 110114 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 110115 tgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcct 110169 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110170 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 110224 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 110225 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 110284 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 110285 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 110344 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 110345 tgatgttgaagaatc 110359
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 900 bits (454), Expect = 0.0 Identities = 579/615 (94%), Gaps = 13/615 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 197 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 257 Query: 121 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | ||| ||| |||||| | ||||| ||| Sbjct: 258 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaa 316 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 317 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 375 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 436 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 495 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 496 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 550 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 551 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 605 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 606 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 665 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 666 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 725 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 726 tgatgttgaagaatc 740
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 900 bits (454), Expect = 0.0 Identities = 578/615 (93%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142716 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 142657 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142656 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 142597 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaa 179 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | | Sbjct: 142596 tcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgaga 142537 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 142536 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 142478 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142477 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 142418 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 142417 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 142358 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | ||||||||||||||||||| | || | |||||||||||||||| Sbjct: 142357 atgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 142303 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142302 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 142248 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 142247 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 142188 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 142187 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgac 142128 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 142127 tgatgttgaagaatc 142113 Score = 900 bits (454), Expect = 0.0 Identities = 578/615 (93%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110612 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 110671 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110672 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 110731 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaa 179 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | | Sbjct: 110732 tcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgaga 110791 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110792 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 110850 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110851 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 110910 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110911 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 110970 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | ||||||||||||||||||| | || | |||||||||||||||| Sbjct: 110971 atgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 111025 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111026 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 111080 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 111081 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 111140 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 111141 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgac 111200 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 111201 tgatgttgaagaatc 111215
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 898 bits (453), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gacaacctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 222 Query: 61 cgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 282 Query: 120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 179 ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| | Sbjct: 283 gcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctaga 342 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 343 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 401 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 461 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 || |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 462 agtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaac 521 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | | | |||||||||||||||| Sbjct: 522 atgaaaccg---taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcct 577 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 578 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 632 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 633 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 692 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 752 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 753 tgatgttgaagaatc 767
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 888 bits (448), Expect = 0.0 Identities = 464/468 (99%), Gaps = 1/468 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 178 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 238 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 cagtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 298 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 299 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 357 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 417 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 477 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 478 tgaaaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctg 537 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 468 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 888 bits (448), Expect = 0.0 Identities = 458/460 (99%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 91 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 151 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 211 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 212 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 270 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 330 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 390 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 450 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggtt 460 |||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ttgaagaatgagccggcgactcataggcagtggcttggtt 490
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 888 bits (448), Expect = 0.0 Identities = 578/617 (93%), Gaps = 12/617 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139550 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 139491 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139490 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 139431 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| || || ||| ||||||||||||| | | Sbjct: 139430 caatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgaga 139371 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139370 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 139312 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139311 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccat 139252 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 139251 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 139192 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgc 417 |||||||| | |||||||||||||||||||| || | | |||||||||||||| Sbjct: 139191 atgaaaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgc 139135 Query: 418 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 477 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139134 ctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccac 139080 Query: 478 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 537 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 139079 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 139020 Query: 538 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 597 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 139019 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 138960 Query: 598 actgatgttgaagaatc 614 ||||||||||||||||| Sbjct: 138959 actgatgttgaagaatc 138943 Score = 888 bits (448), Expect = 0.0 Identities = 578/617 (93%), Gaps = 12/617 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109749 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 109808 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109809 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 109868 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| || || ||| ||||||||||||| | | Sbjct: 109869 caatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgaga 109928 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109929 gtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 109987 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 109988 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccat 110047 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110048 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 110107 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgc 417 |||||||| | |||||||||||||||||||| || | | |||||||||||||| Sbjct: 110108 atgaaaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgc 110164 Query: 418 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 477 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110165 ctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccac 110219 Query: 478 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 537 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 110220 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 110279 Query: 538 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 597 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 110280 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 110339 Query: 598 actgatgttgaagaatc 614 ||||||||||||||||| Sbjct: 110340 actgatgttgaagaatc 110356
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 878 bits (443), Expect = 0.0 Identities = 575/615 (93%), Gaps = 13/615 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 718 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 778 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 779 caatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaag 838 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 839 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 897 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 957 Query: 301 gcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 || || ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 958 gccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 1017 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | ||||| |||||||||||||| || || |||||||||||||||| Sbjct: 1018 atgaaaccg---taagctctcaagcagtgggaggagacag---gctctgaccgcgtgcct 1071 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1072 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccg 1126 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 1127 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 1186 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 1187 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgagggtccgaaccgac 1246 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 1247 tgatgttgaagaatc 1261
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 876 bits (442), Expect = 0.0 Identities = 573/614 (93%), Gaps = 12/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 291 caatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| Sbjct: 470 gcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaaca 529 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | ||||| |||||||||||||| || || |||||| |||||||||| Sbjct: 530 tgaaaccg---taagctctcaagcagtgggaggagacag---gctctgaacgcgtgcctg 583 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 584 ttgaaaaatgagccggcgactcatacgcagtggcttggttaag-----ggaacccaccgg 638 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 639 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgg 698 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 699 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 758 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 759 gatgttgaagaatc 772
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 866 bits (437), Expect = 0.0 Identities = 579/618 (93%), Gaps = 15/618 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag-cgattc 59 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 1929 gacaacctggcgaactgaaccatcttagtagccagaggaaaagaaagcaaaaggcgattc 1988 Query: 60 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1989 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 2048 Query: 120 gcaatacaagcgtt-gtgctgctaggcgaagcggtt-gagtgccgcaccctagatggcta 177 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| | Sbjct: 2049 gcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcga 2108 Query: 178 aagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 237 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2109 aagtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 2167 Query: 238 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2168 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 2227 Query: 298 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 357 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 2228 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 2287 Query: 358 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 417 || |||||||| | |||||||||||||||||||| | || | |||||||||||||| Sbjct: 2288 acatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 2342 Query: 418 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 477 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2343 ctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccac 2397 Query: 478 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 537 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2398 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 2457 Query: 538 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga-ggtccgaacc 596 |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| Sbjct: 2458 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagggtccgaacc 2517 Query: 597 gactgatgttgaagaatc 614 |||||||||||||||||| Sbjct: 2518 gactgatgttgaagaatc 2535
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 864 bits (436), Expect = 0.0 Identities = 571/614 (92%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 223 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 224 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 283 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| ||| |||||| ||||||||||||||||||||| |||||||| |||||| | || Sbjct: 284 caatataagtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagag 343 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 344 tccagtagc-cgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtgg 402 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 462 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 463 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 522 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 523 tgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctg 579 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| ||||| |||||| |||||||| || ||||||||| Sbjct: 580 ttgaagaatgagccggcgacttataggtagtggcctggttaag-----gggacccaccgg 634 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||| Sbjct: 635 agccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacccgaacctgg 694 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| Sbjct: 695 gtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgact 754 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 755 gatgttgaaaaatc 768
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 858 bits (433), Expect = 0.0 Identities = 571/614 (92%), Gaps = 11/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4394 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 4453 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4454 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagag 4513 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||| ||||||||||||| | || || ||||||||||||| |||| Sbjct: 4514 caatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaag 4573 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4574 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 4632 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4633 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 4692 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 4693 gtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaaca 4752 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 4753 tgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctg 4807 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 4808 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccgg 4862 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 4863 agccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgg 4922 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| Sbjct: 4923 gtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgact 4982 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 4983 gatgttgaaaaatc 4996
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 858 bits (433), Expect = 0.0 Identities = 571/614 (92%), Gaps = 11/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23531 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 23472 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 23471 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagag 23412 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||| ||||||||||||| | || || ||||||||||||| |||| Sbjct: 23411 caatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaag 23352 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23351 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 23293 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23292 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 23233 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 23232 gtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaaca 23173 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 23172 tgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctg 23118 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 23117 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccgg 23063 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 23062 agccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgg 23003 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| Sbjct: 23002 gtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgact 22943 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 22942 gatgttgaaaaatc 22929
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 856 bits (432), Expect = 0.0 Identities = 575/617 (93%), Gaps = 13/617 (2%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131707 gacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 131648 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131647 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 131588 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaa 178 | ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | Sbjct: 131587 ctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgag 131528 Query: 179 agtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 238 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 131527 agtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgt 131469 Query: 239 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131468 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 131409 Query: 299 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 358 ||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct: 131408 tagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaa 131349 Query: 359 cgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgc 417 | |||||||| | |||||||||||||||||||| || | || |||||||||||||| Sbjct: 131348 catgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgc 131293 Query: 418 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 477 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 131292 ctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccac 131238 Query: 478 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 537 ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 131237 cggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacc 131178 Query: 538 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 597 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 131177 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 131118 Query: 598 actgatgttgaagaatc 614 ||||||||||||||||| Sbjct: 131117 actgatgttgaagaatc 131101 Score = 856 bits (432), Expect = 0.0 Identities = 575/617 (93%), Gaps = 13/617 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103687 gacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 103746 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103747 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 103806 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaa 178 | ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | Sbjct: 103807 ctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgag 103866 Query: 179 agtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 238 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103867 agtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgt 103925 Query: 239 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103926 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 103985 Query: 299 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 358 ||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct: 103986 tagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaa 104045 Query: 359 cgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgc 417 | |||||||| | |||||||||||||||||||| || | || |||||||||||||| Sbjct: 104046 catgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgc 104101 Query: 418 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 477 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 104102 ctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccac 104156 Query: 478 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 537 ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 104157 cggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacc 104216 Query: 538 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 597 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 104217 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 104276 Query: 598 actgatgttgaagaatc 614 ||||||||||||||||| Sbjct: 104277 actgatgttgaagaatc 104293
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 854 bits (431), Expect = 0.0 Identities = 572/616 (92%), Gaps = 11/616 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86425 gacaacctggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcc 86484 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86485 cgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 86544 Query: 121 c--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaa 178 | |||| |||| |||||||||||||||||||||||||| | ||||||||||||| | Sbjct: 86545 cccaatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgag 86604 Query: 179 agtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 238 ||||||||||| ||||||||||| | ||||| ||||| |||||||||||||||||||||| Sbjct: 86605 agtccagtagc-cgaaagcatcattggcttacgctctaacccgagtagcatggggcacgt 86663 Query: 239 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86664 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 86723 Query: 299 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 358 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 86724 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaa 86783 Query: 359 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 418 | |||||||| | |||||||||||||||||||| || |||||||||||||||||| Sbjct: 86784 catgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcc 86840 Query: 419 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 478 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 86841 tgttgaagaatgagccggcgacttataggcagtggcttggttaag-----ggaacccacc 86895 Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 ||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 86896 ggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacct 86955 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 86956 gggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 87015 Query: 599 ctgatgttgaagaatc 614 ||||||||||| |||| Sbjct: 87016 ctgatgttgaaaaatc 87031
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 854 bits (431), Expect = 0.0 Identities = 572/616 (92%), Gaps = 11/616 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 88511 gacaacctggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcc 88570 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88571 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 88630 Query: 121 ca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaa 178 || ||| |||| |||||||||||||||||||||||||| | ||||||||||||| | Sbjct: 88631 cacaatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgag 88690 Query: 179 agtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 238 ||||||||||| ||||||||||| | ||||| ||||| |||||||||||||||||||||| Sbjct: 88691 agtccagtagc-cgaaagcatcattggcttacgctctaacccgagtagcatggggcacgt 88749 Query: 239 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88750 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 88809 Query: 299 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 358 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 88810 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaa 88869 Query: 359 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 418 | |||||||| | |||||||||||||||||||| || |||||||||||||||||| Sbjct: 88870 catgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcc 88926 Query: 419 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 478 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 88927 tgttgaagaatgagccggcgacttataggcagtggcttggttaag-----ggaacccacc 88981 Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 ||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 88982 ggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacct 89041 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 89042 gggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 89101 Query: 599 ctgatgttgaagaatc 614 ||||||||||| |||| Sbjct: 89102 ctgatgttgaaaaatc 89117
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 850 bits (429), Expect = 0.0 Identities = 571/614 (92%), Gaps = 12/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4663 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 4722 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4723 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 4782 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || || ||||||||||||| |||| Sbjct: 4783 caatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaag 4842 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4843 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtga 4901 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4902 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 4961 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 4962 gtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaaca 5021 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | ||||||||| |||||||||| | | | ||||||||||||||||| Sbjct: 5022 tgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctg 5075 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 5076 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccgg 5130 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 5131 agccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgg 5190 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||| || | |||||||||| |||||||||||||||| Sbjct: 5191 gtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgact 5250 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 5251 gatgttgaaaaatc 5264
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 850 bits (429), Expect = 0.0 Identities = 575/616 (93%), Gaps = 17/616 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattc 59 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 263 gacaacctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattc 322 Query: 60 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 323 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggaga 381 Query: 120 gcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaa 178 ||||||||||||| |||||||||||||||| || || ||| |||||||||||||| || Sbjct: 382 gcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaa 441 Query: 179 agtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 238 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 agtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 500 Query: 239 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 298 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 ggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccga 560 Query: 299 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 358 |||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||| Sbjct: 561 tagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaatagaa 619 Query: 359 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 418 | |||||||| | |||||||||||||||||||| | | ||||||||||||||| Sbjct: 620 catgaaaccg---taagctcccaagcagtgggaggcca----gggctctgaccgcgtgcc 672 Query: 419 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 478 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 673 tgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc 727 Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 728 ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacct 787 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 788 gggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 847 Query: 599 ctgatgttgaagaatc 614 |||||||||||||||| Sbjct: 848 ctgatgttgaagaatc 863
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 850 bits (429), Expect = 0.0 Identities = 571/614 (92%), Gaps = 12/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4663 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 4722 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4723 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 4782 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || || ||||||||||||| |||| Sbjct: 4783 caatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaag 4842 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4843 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtga 4901 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4902 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 4961 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 4962 gtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaaca 5021 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | ||||||||| |||||||||| | | | ||||||||||||||||| Sbjct: 5022 tgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctg 5075 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 5076 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccaccgg 5130 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 5131 agccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgg 5190 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||| || | |||||||||| |||||||||||||||| Sbjct: 5191 gtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgact 5250 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 5251 gatgttgaaaaatc 5264
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 842 bits (425), Expect = 0.0 Identities = 438/441 (99%), Gaps = 1/441 (0%) Strand = Plus / Plus Query: 174 gctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatgggg 233 |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatgggg 59 Query: 234 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 119 Query: 294 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 179 Query: 354 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 239 Query: 414 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 299 Query: 474 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 533 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 300 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 359 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 419 Query: 594 accgactgatgttgaagaatc 614 ||||||||||||||||||||| Sbjct: 420 accgactgatgttgaagaatc 440
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 833 bits (420), Expect = 0.0 Identities = 539/574 (93%), Gaps = 11/574 (1%) Strand = Plus / Minus Query: 19 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 77 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 78 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 137 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 138 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcncgaaagc 197 |||||||||||||||| |||||| |||||||||||||| | ||||||||||| ||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc-cgaaagc 386 Query: 198 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 257 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 atcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 326 Query: 258 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 266 Query: 318 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 377 ||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| Sbjct: 265 gggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagct 209 Query: 378 cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 437 |||||||||||||||| | | | |||||||||||||||||||||||||||||||||| Sbjct: 208 cccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggc 150 Query: 438 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 497 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 149 gactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcga 95 Query: 498 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 557 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 35 Query: 558 aggatgaagcttggatgaaactaagcagaggtcc 591 |||||||||||||| |||||||||| ||||||| Sbjct: 34 aggatgaagcttgggtgaaactaagtggaggtcc 1
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 831 bits (419), Expect = 0.0 Identities = 567/612 (92%), Gaps = 12/612 (1%) Strand = Plus / Minus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 52520 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 52461 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 52460 agtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaa 52401 Query: 124 tacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtc 182 || ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||| Sbjct: 52400 taaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtc 52341 Query: 183 cagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 242 ||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 52340 cagtagc-cgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaa 52282 Query: 243 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 302 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 52281 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagt 52222 Query: 303 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 362 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| || Sbjct: 52221 taagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatg 52162 Query: 363 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 422 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 52161 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 52107 Query: 423 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 482 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 52106 gaagaatgagccggcgactcataggcagcggcttggttaag-----ggaacccaccggag 52052 Query: 483 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 542 || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 52051 ccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggt 51992 Query: 543 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 602 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 51991 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 51932 Query: 603 tgttgaagaatc 614 |||||||||||| Sbjct: 51931 tgttgaagaatc 51920 Score = 831 bits (419), Expect = 0.0 Identities = 567/612 (92%), Gaps = 12/612 (1%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 37308 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 37367 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 37368 agtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaa 37427 Query: 124 tacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtc 182 || ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||| Sbjct: 37428 taaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtc 37487 Query: 183 cagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 242 ||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 37488 cagtagc-cgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaa 37546 Query: 243 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 302 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 37547 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagt 37606 Query: 303 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 362 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| || Sbjct: 37607 taagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatg 37666 Query: 363 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 422 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 37667 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 37721 Query: 423 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 482 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 37722 gaagaatgagccggcgactcataggcagcggcttggttaag-----ggaacccaccggag 37776 Query: 483 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 542 || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 37777 ccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggt 37836 Query: 543 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 602 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 37837 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 37896 Query: 603 tgttgaagaatc 614 |||||||||||| Sbjct: 37897 tgttgaagaatc 37908
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 831 bits (419), Expect = 0.0 Identities = 567/612 (92%), Gaps = 12/612 (1%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4236 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccat 4295 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4296 agtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaa 4355 Query: 124 tacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtc 182 || ||| || ||||||||||||||| | | |||| ||| |||||||||||||| |||||| Sbjct: 4356 taaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtc 4415 Query: 183 cagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 242 ||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 4416 cagtagc-cgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaa 4474 Query: 243 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 302 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4475 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagt 4534 Query: 303 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 362 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| || Sbjct: 4535 taagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatg 4594 Query: 363 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 422 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 4595 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 4649 Query: 423 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 482 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 4650 gaagaatgagccggcgactcataggcagcggcttggttaag-----ggaacccaccggag 4704 Query: 483 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 542 || |||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 4705 ccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggt 4764 Query: 543 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 602 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 4765 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 4824 Query: 603 tgttgaagaatc 614 |||||||||||| Sbjct: 4825 tgttgaagaatc 4836
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 817 bits (412), Expect = 0.0 Identities = 566/614 (92%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116046 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattct 115987 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| Sbjct: 115986 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggag 115928 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 | | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| |||| Sbjct: 115927 ctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaag 115868 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||| | |||||||| |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 115867 tccagtaac-cgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtgg 115809 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 115808 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 115749 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 115748 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 115689 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 115688 tgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctg 115632 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||| Sbjct: 115631 ttgaagaatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccgg 115577 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 115576 agccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgg 115517 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 115516 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 115457 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 115456 gatgttgaaaaatc 115443 Score = 817 bits (412), Expect = 0.0 Identities = 566/614 (92%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86074 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattct 86133 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| Sbjct: 86134 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggag 86192 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 | | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| |||| Sbjct: 86193 ctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaag 86252 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||| | |||||||| |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 86253 tccagtaac-cgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtgg 86311 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 86312 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 86371 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 86372 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 86431 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 86432 tgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctg 86488 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||| Sbjct: 86489 ttgaagaatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccgg 86543 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 86544 agccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgg 86603 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 86604 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 86663 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 86664 gatgttgaaaaatc 86677
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 815 bits (411), Expect = 0.0 Identities = 569/620 (91%), Gaps = 15/620 (2%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 128283 gacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcc 128224 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct: 128223 cgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggag 128164 Query: 121 c------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 174 | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 128163 cgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatgg 128104 Query: 175 ctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggc 234 | | ||||||||||| ||||||||||||||||| | ||||| |||| ||||||||||||| Sbjct: 128103 caagagtccagtagc-cgaaagcatcactagctcacgctctaacccaagtagcatggggc 128045 Query: 235 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128044 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 127985 Query: 295 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 354 |||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||| Sbjct: 127984 ccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaat 127925 Query: 355 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 414 ||||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| Sbjct: 127924 agaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgca 127868 Query: 415 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 474 |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 127867 tgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag-----ggaacc 127813 Query: 475 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 534 |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| Sbjct: 127812 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccga 127753 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| Sbjct: 127752 acctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaa 127693 Query: 595 ccgactgatgttgaagaatc 614 ||||||||||||||| |||| Sbjct: 127692 ccgactgatgttgaaaaatc 127673 Score = 815 bits (411), Expect = 0.0 Identities = 569/620 (91%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 95164 gacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcc 95223 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct: 95224 cgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggag 95283 Query: 121 c------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 174 | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95284 cgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatgg 95343 Query: 175 ctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggc 234 | | ||||||||||| ||||||||||||||||| | ||||| |||| ||||||||||||| Sbjct: 95344 caagagtccagtagc-cgaaagcatcactagctcacgctctaacccaagtagcatggggc 95402 Query: 235 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95403 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 95462 Query: 295 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 354 |||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||| Sbjct: 95463 ccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaat 95522 Query: 355 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 414 ||||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| Sbjct: 95523 agaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgca 95579 Query: 415 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 474 |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 95580 tgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag-----ggaacc 95634 Query: 475 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 534 |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| Sbjct: 95635 caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccga 95694 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| Sbjct: 95695 acctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaa 95754 Query: 595 ccgactgatgttgaagaatc 614 ||||||||||||||| |||| Sbjct: 95755 ccgactgatgttgaaaaatc 95774
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 811 bits (409), Expect = 0.0 Identities = 566/615 (92%), Gaps = 10/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146396 gacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 146337 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146336 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 146277 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | || Sbjct: 146276 caatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagag 146217 Query: 181 tccagtagcncgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtg 239 ||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 146216 tccagtagc-cgaaagcatcactggctttatgctccaacccgagtagcatggggcacgca 146158 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 146157 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 146098 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 146097 agcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 146038 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | ||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 146037 atgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcct 145981 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| Sbjct: 145980 gttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccaccg 145926 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 145925 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 145866 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 145865 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 145806 Query: 600 tgatgttgaagaatc 614 |||||||||| |||| Sbjct: 145805 tgatgttgaaaaatc 145791 Score = 811 bits (409), Expect = 0.0 Identities = 566/615 (92%), Gaps = 10/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112066 gacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 112125 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112126 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 112185 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | || Sbjct: 112186 caatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagag 112245 Query: 181 tccagtagcncgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtg 239 ||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 112246 tccagtagc-cgaaagcatcactggctttatgctccaacccgagtagcatggggcacgca 112304 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112305 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 112364 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 112365 agcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 112424 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | ||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 112425 atgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcct 112481 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| Sbjct: 112482 gttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccaccg 112536 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 112537 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 112596 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 112597 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 112656 Query: 600 tgatgttgaagaatc 614 |||||||||| |||| Sbjct: 112657 tgatgttgaaaaatc 112671
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 809 bits (408), Expect = 0.0 Identities = 564/614 (91%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 223 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 224 catagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggag 283 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||| | |||||||| |||||||||||| ||||| | | ||||| ||||||| | || Sbjct: 284 caaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagag 343 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 344 tccagtagc-cgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtgg 402 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 403 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 462 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 463 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaaca 522 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 523 tgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctg 579 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||| Sbjct: 580 ttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccgg 634 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| Sbjct: 635 agccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgg 694 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 695 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 754 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 755 gatgttgaaaaatc 768
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 801 bits (404), Expect = 0.0 Identities = 563/614 (91%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4053 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 4112 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4113 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 4172 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 4173 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 4232 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||| |||| |||| || | |||||||||||||||||||||||| Sbjct: 4233 tccagtagc-cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgg 4291 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4292 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 4351 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 4352 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 4411 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 ||||| || | |||| |||||||||| |||| ||| |||||||||||||||||||| Sbjct: 4412 tgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctg 4468 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| |||||||| |||| |||||| Sbjct: 4469 ttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccgg 4523 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 4524 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgg 4583 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 4584 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 4643 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 4644 gatgttgaaaaatc 4657
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 801 bits (404), Expect = 0.0 Identities = 563/614 (91%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 163 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 222 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 282 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 283 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 342 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||| |||| |||| || | |||||||||||||||||||||||| Sbjct: 343 tccagtagc-cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgg 401 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 461 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 462 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 521 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 ||||| || | |||| |||||||||| |||| ||| |||||||||||||||||||| Sbjct: 522 tgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctg 578 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| |||||||| |||| |||||| Sbjct: 579 ttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccgg 633 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 634 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgg 693 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 694 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 753 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 754 gatgttgaaaaatc 767
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 801 bits (404), Expect = 0.0 Identities = 563/614 (91%), Gaps = 9/614 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 151082 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 151023 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151022 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 150963 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 150962 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 150903 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||| |||| |||| || | |||||||||||||||||||||||| Sbjct: 150902 tccagtagc-cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgg 150844 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150843 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 150784 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 150783 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 150724 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 ||||| ||| |||| |||||||||| |||| ||| |||||||||||||||||||| Sbjct: 150723 tgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctg 150667 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| |||||||| |||| |||||| Sbjct: 150666 ttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccgg 150612 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 150611 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgg 150552 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 150551 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 150492 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 150491 gatgttgaaaaatc 150478 Score = 801 bits (404), Expect = 0.0 Identities = 563/614 (91%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117584 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 117643 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117644 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 117703 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 117704 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 117763 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||| |||| |||| || | |||||||||||||||||||||||| Sbjct: 117764 tccagtagc-cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgg 117822 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117823 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 117882 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 117883 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 117942 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 ||||| || | |||| |||||||||| |||| ||| |||||||||||||||||||| Sbjct: 117943 tgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctg 117999 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| |||||||| |||| |||||| Sbjct: 118000 ttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccgg 118054 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 118055 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgg 118114 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 118115 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 118174 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 118175 gatgttgaaaaatc 118188
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 801 bits (404), Expect = 0.0 Identities = 563/614 (91%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 163 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 222 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 282 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 283 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 342 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||| |||| |||| || | |||||||||||||||||||||||| Sbjct: 343 tccagtagc-cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgg 401 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 461 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 462 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 521 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 ||||| || | |||| |||||||||| |||| ||| |||||||||||||||||||| Sbjct: 522 tgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctg 578 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| |||||||| |||| |||||| Sbjct: 579 ttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccgg 633 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 634 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgg 693 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 694 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 753 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 754 gatgttgaaaaatc 767
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 791 bits (399), Expect = 0.0 Identities = 565/618 (91%), Gaps = 13/618 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 164 gacaacccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattct 223 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 224 cgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggag 283 Query: 121 caatacaa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 176 | |||||| || ||| ||||||||||||||| ||||||| | |||||| |||||| Sbjct: 284 ctatacaaataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtg 343 Query: 177 aaagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcac 236 | ||||||||| | ||||||||| || | |||||||||| |||||||||||||||||||| Sbjct: 344 agagtccagtaac-cgaaagcataacaatcttatgctctaacccgagtagcatggggcac 402 Query: 237 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 462 Query: 297 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 356 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 463 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatag 522 Query: 357 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 416 ||| |||||||| | |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 523 aacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtg 579 Query: 417 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 476 ||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| Sbjct: 580 cctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaaccca 634 Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 536 ||||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||| Sbjct: 635 ccggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaac 694 Query: 537 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 596 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 695 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaacc 754 Query: 597 gactgatgttgaagaatc 614 ||||||||||||| |||| Sbjct: 755 gactgatgttgaaaaatc 772
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 779 bits (393), Expect = 0.0 Identities = 561/614 (91%), Gaps = 6/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 147 gacaacctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattct 206 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 207 cgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggag 266 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 | | | |||| |||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 267 ctaaagaagcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagag 326 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||| | ||||||||| || ||||| ||||| ||||||||| |||||||||||||| Sbjct: 327 tccagtaac-cgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtgg 385 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 445 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 446 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 505 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| | |||| ||||||||||||||| ||| |||||||||||||||||||| Sbjct: 506 tgaaaccg---taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctg 562 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| |||||||||||| |||||||||||| | | ||||||| Sbjct: 563 ttgaagaatgagccggcgacttataggcagtggcctggttaagggaaag--aaccaccgg 620 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 621 agccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccgaacctgg 680 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 681 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 740 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 741 gatgttgaaaaatc 754
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 779 bits (393), Expect = 0.0 Identities = 562/615 (91%), Gaps = 10/615 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117986 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 117927 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117926 catagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagag 117867 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||| | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 117866 caaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagag 117807 Query: 181 tccagtagcncgaaagcatcactag-cttatgctctgacccgagtagcatggggcacgtg 239 ||||||||| ||||||||| || | || ||||||| ||||||||||||||||||||||| Sbjct: 117806 tccagtagc-cgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtg 117748 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117747 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 117688 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 117687 agtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 117628 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 ||||||||| |||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 117627 atgaaaccgta---agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcct 117571 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| Sbjct: 117570 gttgaagaatgagccggcgacttataggtagtggcctggttaagggaac-----ccaccg 117516 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 117515 gagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctg 117456 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 117455 ggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 117396 Query: 600 tgatgttgaagaatc 614 |||||||||| |||| Sbjct: 117395 tgatgttgaaaaatc 117381 Score = 779 bits (393), Expect = 0.0 Identities = 562/615 (91%), Gaps = 10/615 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90116 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 90175 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90176 catagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagag 90235 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||| | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 90236 caaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagag 90295 Query: 181 tccagtagcncgaaagcatcactag-cttatgctctgacccgagtagcatggggcacgtg 239 ||||||||| ||||||||| || | || ||||||| ||||||||||||||||||||||| Sbjct: 90296 tccagtagc-cgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtg 90354 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 90355 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 90414 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 90415 agtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 90474 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 90475 atgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcct 90531 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||| Sbjct: 90532 gttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccg 90586 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 90587 gagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctg 90646 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 90647 ggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 90706 Query: 600 tgatgttgaagaatc 614 |||||||||| |||| Sbjct: 90707 tgatgttgaaaaatc 90721
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 757 bits (382), Expect = 0.0 Identities = 388/390 (99%) Strand = Plus / Plus Query: 225 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 285 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 345 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 404 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 405 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 465 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 524 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 525 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 360 Query: 585 gaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 361 gaggtccgaaccgactgatgttgaagaatc 390
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 735 bits (371), Expect = 0.0 Identities = 558/615 (90%), Gaps = 13/615 (2%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 163 gacaacctggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcgattcc 222 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 223 catagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggttgtgggagag 282 Query: 121 caatacaagcgttgtgctgctaggcgaagcgg-ttgagtgccgcaccctagatggctaaa 179 ||||| |||||| ||||||||||||||||| | || | || |||||||||||||| ||| Sbjct: 283 caataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctagatggcgaaa 342 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 ||||||||| | |||||||||||| || |||||||||||||||||||||| |||||| Sbjct: 343 gtccagtag-tcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacgtg 401 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 402 taatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccaat 461 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 || ||||||||||||||||||| ||||||||||||||| | |||| ||||||||||||| Sbjct: 462 agtaaagtagtaccgtgagggaagggtgaaaagaacccc-attggggagtgaaatagaac 520 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 ||||||||| |||| ||||||||||||||| | || | |||||||||||||||| Sbjct: 521 atgaaaccgta---agctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 575 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 576 gttgaagaatgagccggcgactcataggcagcggcttggttaagggaac-----ccaccg 630 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||| Sbjct: 631 gagccatagcgaaagcgagtattcataggactattgtcactgcttatggacccgaacctg 690 Query: 540 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 599 |||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 691 ggtgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtccgaaccgac 750 Query: 600 tgatgttgaagaatc 614 ||||||||||||||| Sbjct: 751 tgatgttgaagaatc 765
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 733 bits (370), Expect = 0.0 Identities = 373/374 (99%) Strand = Plus / Plus Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 360 Query: 601 gatgttgaagaatc 614 |||||||||||||| Sbjct: 361 gatgttgaagaatc 374
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 722 bits (364), Expect = 0.0 Identities = 521/570 (91%), Gaps = 10/570 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2207 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 2266 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2267 catagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagag 2326 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||| | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 2327 caaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagag 2386 Query: 181 tccagtagcncgaaagcatcactag-cttatgctctgacccgagtagcatggggcacgtg 239 ||||||||| ||||||||| || | || ||||||| ||||||||||||||||||||||| Sbjct: 2387 tccagtagc-cgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtg 2445 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2446 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 2505 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 2506 agtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 2565 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2566 atgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcct 2622 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 479 |||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||| Sbjct: 2623 gttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccg 2677 Query: 480 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 539 ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 2678 gagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctg 2737 Query: 540 ggtgatctatccatgaccaggatgaagctt 569 ||||||||| |||||||||||||||||||| Sbjct: 2738 ggtgatctaaccatgaccaggatgaagctt 2767
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 710 bits (358), Expect = 0.0 Identities = 376/381 (98%), Gaps = 2/381 (0%) Strand = Plus / Minus Query: 236 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 296 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 356 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 416 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 473 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 474 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 533 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122520 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 122461 Query: 594 accgactgatgttgaagaatc 614 ||||||||||||||||||||| Sbjct: 122460 accgactgatgttgaagaatc 122440 Score = 452 bits (228), Expect = e-124 Identities = 241/244 (98%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123306 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 123247 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123246 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 123187 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123186 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 123127 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 123126 tccagtagc-cgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtgg 123068 Query: 241 aatc 244 |||| Sbjct: 123067 aatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 710 bits (358), Expect = 0.0 Identities = 376/381 (98%), Gaps = 2/381 (0%) Strand = Plus / Minus Query: 236 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 296 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 356 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 416 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 473 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 474 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 533 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12825061 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 12825002 Query: 594 accgactgatgttgaagaatc 614 ||||||||||||||||||||| Sbjct: 12825001 accgactgatgttgaagaatc 12824981 Score = 452 bits (228), Expect = e-124 Identities = 241/244 (98%), Gaps = 1/244 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825847 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 12825788 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825787 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 12825728 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825727 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 12825668 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 12825667 tccagtagc-cgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtgg 12825609 Query: 241 aatc 244 |||| Sbjct: 12825608 aatc 12825605 Score = 73.8 bits (37), Expect = 6e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||| || |||||||||| ||| ||| Sbjct: 16021783 gtccagtagc-cgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtg 16021841 Query: 240 g 240 | Sbjct: 16021842 g 16021842
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 700 bits (353), Expect = 0.0 Identities = 438/462 (94%), Gaps = 7/462 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 101 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 161 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 162 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 221 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 280 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 340 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 341 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 400 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 401 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 455 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttggtta 461 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 gttgaagaatgagccggcgactcataggcagtggcttggtta 497
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 686 bits (346), Expect = 0.0 Identities = 434/459 (94%), Gaps = 7/459 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 121 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 179 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 180 gtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 215 Query: 240 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 214 gaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgat 155 Query: 300 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 359 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 154 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 95 Query: 360 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 419 |||||||| | |||||||||||||||||||| | || | |||||||||||||||| Sbjct: 94 atgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 40 Query: 420 gttgaagaatgagccggcgactcataggcagtggcttgg 458 ||||||||||||||||||||||||||||||||||||||| Sbjct: 39 gttgaagaatgagccggcgactcataggcagtggcttgg 1
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 680 bits (343), Expect = 0.0 Identities = 353/355 (99%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 222 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 282 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 342 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 343 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 401 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 461 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 672 bits (339), Expect = 0.0 Identities = 349/351 (99%), Gaps = 1/351 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 196 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 256 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 257 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 315 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 375 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 351 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 426
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 640 bits (323), Expect = e-180 Identities = 377/393 (95%), Gaps = 4/393 (1%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130372 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 130313 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130312 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 130253 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 | |||||||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 130252 ctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 130193 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130192 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 130134 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130133 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 130074 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 130073 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 130014 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | |||||||||||||||||||| Sbjct: 130013 tgaaaccg---taagctcccaagcagtgggagg 129984 Score = 640 bits (323), Expect = e-180 Identities = 377/393 (95%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102084 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 102143 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102144 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 102203 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 | |||||||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 102204 ctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 102263 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102264 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 102322 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102323 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 102382 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 102383 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 102442 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | |||||||||||||||||||| Sbjct: 102443 tgaaaccg---taagctcccaagcagtgggagg 102472 Score = 323 bits (163), Expect = 4e-85 Identities = 199/211 (94%), Gaps = 5/211 (2%) Strand = Plus / Minus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatc 129764 Score = 323 bits (163), Expect = 4e-85 Identities = 199/211 (94%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatc 102692
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 632 bits (319), Expect = e-178 Identities = 376/393 (95%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 46415 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcc 46474 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 46475 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagag 46534 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| || Sbjct: 46535 caatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagag 46594 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46595 tccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 46653 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46654 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 46713 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 46714 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 46773 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | ||||| |||||||||||||| Sbjct: 46774 tgaaaccg---taagctctcaagcagtgggagg 46803 Score = 339 bits (171), Expect = 7e-90 Identities = 201/211 (95%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatc 47023
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 617 bits (311), Expect = e-173 Identities = 374/393 (95%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| Sbjct: 470 gcgaagtactaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaaca 529 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | |||||||||||||||||||| Sbjct: 530 tgaaaccg---taagctcccaagcagtgggagg 559 Score = 256 bits (129), Expect = 8e-65 Identities = 165/177 (93%), Gaps = 5/177 (2%) Strand = Plus / Plus Query: 438 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 497 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 498 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 557 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 558 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 763
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 617 bits (311), Expect = e-173 Identities = 374/393 (95%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 470 gcgaagtactaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaaca 529 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | |||||||||||||||||||| Sbjct: 530 tgaaaccg---taagctcccaagcagtgggagg 559 Score = 307 bits (155), Expect = 2e-80 Identities = 197/211 (93%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatc 786
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 617 bits (311), Expect = e-173 Identities = 374/393 (95%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 470 gcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 529 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | |||||||||||||||||||| Sbjct: 530 tgaaaccg---taagctcccaagcagtgggagg 559 Score = 285 bits (144), Expect = 8e-74 Identities = 197/212 (92%), Gaps = 7/212 (3%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 464 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 522 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 523 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 582 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 583 cagaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatc 786
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 611 bits (308), Expect = e-171 Identities = 404/432 (93%), Gaps = 7/432 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 212 gacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcc 271 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 331 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | || Sbjct: 332 caataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatag 391 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 392 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 450 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 510 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| Sbjct: 511 gcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaaca 570 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcct 419 |||||||| | ||||||||||||| |||||| | || | |||||||||||||||| Sbjct: 571 tgaaaccg---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcct 625 Query: 420 gttgaagaatga 431 |||||||||||| Sbjct: 626 gttgaagaatga 637
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 609 bits (307), Expect = e-171 Identities = 461/508 (90%), Gaps = 11/508 (2%) Strand = Plus / Minus Query: 101 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 160 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 161 cgcaccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgaccc 220 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| |||| Sbjct: 6224 tgcaccctagatggtgagagtccagtag-tcgaaagcggcattggcttacgctctaaccc 6166 Query: 221 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6165 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 6106 Query: 281 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6105 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccta 6046 Query: 341 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 400 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6045 tcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgg 5989 Query: 401 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 460 |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 5988 aatctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtt 5929 Query: 461 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 520 ||| || |||||||||||||||||||| |||||||||| ||||||| ||||||||| Sbjct: 5928 aag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcact 5874 Query: 521 gc-ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 579 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5873 gctttatggacccgaacctgggtgatctatccatgaccaggatgaagc-tggatgaaact 5815 Query: 580 aagcagaggtccgaaccgactgatgttg 607 ||| |||||||||||||||||||||||| Sbjct: 5814 aagtagaggtccgaaccgactgatgttg 5787 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Minus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 6411 caacctggtgaactgaaacatcttagtaaccagaggaagagaaagcaaaagcgattcccg 6352 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccgt 99 ||||||||||||||||||||||||||||||||||||| Sbjct: 6351 tagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 609 bits (307), Expect = e-171 Identities = 373/393 (94%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 470 gcgaagtaataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaaca 529 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | |||||||||||||||||||| Sbjct: 530 tgaaaccg---taagctcccaagcagtgggagg 559 Score = 274 bits (138), Expect = 3e-70 Identities = 194/211 (91%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatc 786
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 609 bits (307), Expect = e-171 Identities = 373/393 (94%), Gaps = 4/393 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| Sbjct: 470 gcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaaca 529 Query: 361 tgaaaccgtgctgagctcccaagcagtgggagg 393 |||||||| | |||||||||||||||||||| Sbjct: 530 tgaaaccg---taagctcccaagcagtgggagg 559 Score = 276 bits (139), Expect = 8e-71 Identities = 194/211 (91%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatc 785
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 589 bits (297), Expect = e-165 Identities = 376/399 (94%), Gaps = 5/399 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 230 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 291 caatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaag 350 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 351 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 409 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 469 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||| ||| Sbjct: 470 gcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaaca 528 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaag 399 |||||||| | ||||| |||||||||||||| ||||| Sbjct: 529 tgaaaccg---taagctctcaagcagtgggaggagaaag 564 Score = 250 bits (126), Expect = 5e-63 Identities = 141/146 (96%) Strand = Plus / Plus Query: 469 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 528 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 529 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 588 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 589 tccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatc 747
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 571 bits (288), Expect = e-159 Identities = 298/300 (99%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 127 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 187 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 247 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 248 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 306 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 366
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 561 bits (283), Expect = e-157 Identities = 531/610 (87%), Gaps = 14/610 (2%) Strand = Plus / Minus Query: 9 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 68 ||||||| |||||||| | ||||| | |||| |||| |||||||||||||||| ||||| Sbjct: 139099 ggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgattcccgcagtag 139040 Query: 69 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac-- 126 ||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 139039 cggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggagagcgataagt 138980 Query: 127 --aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 184 ||| ||||||||| |||| |||||||| |||| ||||| || ||| || || ||||| Sbjct: 138979 ataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacggttagagtccg 138921 Query: 185 gtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 244 ||||| || ||||| ||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 138920 gtagc-cggaagcagcacaggcttacgctctgacccgagtagcatggggcacgtggaatc 138862 Query: 245 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 304 ||||| |||||||| |||||||||| | ||||||||||||| |||||||||||||||||| Sbjct: 138861 ccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgaccgatagcga 138802 Query: 305 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 364 | |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 138801 aatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 138742 Query: 365 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 424 |||| | ||||||| |||||||||||| ||| |||||||||||||||||||||||| Sbjct: 138741 accg---taagctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttga 138685 Query: 425 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 484 ||||||||||||||||| |||||| | ||| |||||||| |||||||||||||||| Sbjct: 138684 agaatgagccggcgacttataggcggcggcctggttaag-----ggaacccaccggagcc 138630 Query: 485 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 544 |||||||||||||||||| ||||| | |||| ||||||||||||||||||| |||||| Sbjct: 138629 gtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtga 138570 Query: 545 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 604 ||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||| Sbjct: 138569 tctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatg 138510 Query: 605 ttgaagaatc 614 ||||| |||| Sbjct: 138509 ttgaaaaatc 138500 Score = 561 bits (283), Expect = e-157 Identities = 531/610 (87%), Gaps = 14/610 (2%) Strand = Plus / Plus Query: 9 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 68 ||||||| |||||||| | ||||| | |||| |||| |||||||||||||||| ||||| Sbjct: 82778 ggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgattcccgcagtag 82837 Query: 69 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac-- 126 ||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 82838 cggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggagagcgataagt 82897 Query: 127 --aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 184 ||| ||||||||| |||| |||||||| |||| ||||| || ||| || || ||||| Sbjct: 82898 ataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacggttagagtccg 82956 Query: 185 gtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 244 ||||| || ||||| ||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 82957 gtagc-cggaagcagcacaggcttacgctctgacccgagtagcatggggcacgtggaatc 83015 Query: 245 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 304 ||||| |||||||| |||||||||| | ||||||||||||| |||||||||||||||||| Sbjct: 83016 ccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgaccgatagcga 83075 Query: 305 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 364 | |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 83076 aatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 83135 Query: 365 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 424 |||| | ||||||| |||||||||||| ||| |||||||||||||||||||||||| Sbjct: 83136 accg---taagctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttga 83192 Query: 425 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 484 ||||||||||||||||| |||||| | ||| |||||||| |||||||||||||||| Sbjct: 83193 agaatgagccggcgacttataggcggcggcctggttaag-----ggaacccaccggagcc 83247 Query: 485 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 544 |||||||||||||||||| ||||| | |||| ||||||||||||||||||| |||||| Sbjct: 83248 gtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtga 83307 Query: 545 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 604 ||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||| Sbjct: 83308 tctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatg 83367 Query: 605 ttgaagaatc 614 ||||| |||| Sbjct: 83368 ttgaaaaatc 83377
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 539 bits (272), Expect = e-150 Identities = 532/614 (86%), Gaps = 6/614 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 144083 gacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcc 144142 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | ||||| ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| Sbjct: 144143 cctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagag 144202 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 || || | || | ||||||||||| ||||||||| |||||| |||||| | || Sbjct: 144203 tgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatag 144262 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| || ||| | |||||| | |||| |||| |||||||||||||||| Sbjct: 144263 tccagtagc-cggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaa 144321 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 144322 aatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgata 144381 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 144382 gcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaaca 144441 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| ||||||||||||||||||||| ||| | ||||||| |||||||||||| Sbjct: 144442 tgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctg 144498 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| ||||| ||||| ||||||||| |||||| |||| Sbjct: 144499 ttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc-ccgg 144556 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| | |||| |||||||| |||||| |||||||||||| Sbjct: 144557 agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgg 144616 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 144617 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 144676 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 144677 gatgttgaaaaatc 144690 Score = 539 bits (272), Expect = e-150 Identities = 532/614 (86%), Gaps = 6/614 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 88768 gacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcc 88709 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 | ||||| ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| Sbjct: 88708 cctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagag 88649 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 || || | || | ||||||||||| ||||||||| |||||| |||||| | || Sbjct: 88648 tgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatag 88589 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| || ||| | |||||| | |||| |||| |||||||||||||||| Sbjct: 88588 tccagtagc-cggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaa 88530 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 88529 aatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgata 88470 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 360 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 88469 gcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaaca 88410 Query: 361 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 420 |||||||| ||||||||||||||||||||| ||| | ||||||| |||||||||||| Sbjct: 88409 tgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctg 88353 Query: 421 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 480 ||||||||||||||||||||| ||||| ||||| ||||||||| |||||| |||| Sbjct: 88352 ttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc-ccgg 88295 Query: 481 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 540 |||||||||||||||||||||| | |||| |||||||| |||||| |||||||||||| Sbjct: 88294 agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgg 88235 Query: 541 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 600 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 88234 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 88175 Query: 601 gatgttgaagaatc 614 ||||||||| |||| Sbjct: 88174 gatgttgaaaaatc 88161
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 533 bits (269), Expect = e-148 Identities = 315/329 (95%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 140 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 199 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 259 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||||| || ||||||||||||||| || Sbjct: 260 caatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggag 319 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 320 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 378 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 438 Query: 301 gcgaagtagtaccgtgagggaaaggtgaa 329 |||||||||||||||||||||| |||||| Sbjct: 439 gcgaagtagtaccgtgagggaagggtgaa 467
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 531 bits (268), Expect = e-148 Identities = 324/339 (95%), Gaps = 4/339 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 219 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 279 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| |||||||||||||||||||| || | | |||||||||||||| | || Sbjct: 280 caatacaagcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatag 339 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 340 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 398 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 300 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 399 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgata 456 Query: 301 gcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 339 | |||||||||||||||||||| |||| ||||||||||| Sbjct: 457 gtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 218 bits (110), Expect = 2e-53 Identities = 160/174 (91%), Gaps = 7/174 (4%) Strand = Plus / Plus Query: 444 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 502 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 503 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 560 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 561 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 782
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 509 bits (257), Expect = e-141 Identities = 285/293 (97%), Gaps = 1/293 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 237 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 177 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 176 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 117 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 116 tccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 58 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 293 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 5
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 444 bits (224), Expect = e-121 Identities = 356/398 (89%), Gaps = 9/398 (2%) Strand = Plus / Plus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 |||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 380 acccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 439 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 440 ctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacc 499 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 |||| ||| ||||||||||||| ||||| || | |||| |||||||||||||| || Sbjct: 500 cccatcggggagtgaaatagaacatgaaatcg---taagctttcaagcagtgggaggaga 556 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 557 attcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgt 616 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 ||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 617 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtc-taacagggcgattgt 670 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 671 cactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaa 730 Query: 577 actaagcagaggtccgaaccgactgatgttgaagaatc 614 || ||| ||||||||||||||||||||||||| |||| Sbjct: 731 accaagtggaggtccgaaccgactgatgttgaaaaatc 768 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 227 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 121 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 228 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 442 bits (223), Expect = e-121 Identities = 356/398 (89%), Gaps = 8/398 (2%) Strand = Plus / Plus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 670 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 729 Query: 577 actaagcagaggtccgaaccgactgatgttgaagaatc 614 | ||| ||||||||||||||||||||||||| |||| Sbjct: 730 gccaagtggaggtccgaaccgactgatgttgaaaaatc 767 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 211 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 99 | ||||| |||||||||||||||| ||||||||||||| Sbjct: 212 ctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 442 bits (223), Expect = e-121 Identities = 356/398 (89%), Gaps = 8/398 (2%) Strand = Plus / Plus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 683 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 742 Query: 577 actaagcagaggtccgaaccgactgatgttgaagaatc 614 | ||| ||||||||||||||||||||||||| |||| Sbjct: 743 gccaagtggaggtccgaaccgactgatgttgaaaaatc 780 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 224 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 99 | ||||| |||||||||||||||| ||||||||||||| Sbjct: 225 ctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 436 bits (220), Expect = e-119 Identities = 356/398 (89%), Gaps = 10/398 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 458 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 787 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 846 Query: 577 actaagcagaggtccgaaccgactgatgttgaagaatc 614 | ||| ||||||||||||||||||||||||| |||| Sbjct: 847 gccaagtggaggtccgaaccgactgatgttgaaaaatc 884 Score = 163 bits (82), Expect = 8e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 328 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 98 | ||||| |||||||||||||||| |||||||||||| Sbjct: 329 ctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 436 bits (220), Expect = e-119 Identities = 374/422 (88%), Gaps = 10/422 (2%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 372 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 373 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 432 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 433 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 492 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 493 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 552 ||| |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaacca 722 Query: 553 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 612 ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 723 tgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaa 782 Query: 613 tc 614 || Sbjct: 783 tc 784 Score = 131 bits (66), Expect = 3e-27 Identities = 143/168 (85%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 161 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 220 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123 ||||| ||||||||||| |||| |||||||||||| |||| |||||| || |||||| Sbjct: 221 agtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggtt---ggggagcaa 277 Query: 124 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 171 || ||| ||||| |||||| |||||| || |||| | | |||||||| Sbjct: 278 taaaagtattgtgttgctagacgaagcagtggagttctgaaccctaga 325
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 436 bits (220), Expect = e-119 Identities = 355/398 (89%), Gaps = 9/398 (2%) Strand = Plus / Minus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 |||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 124885 acccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 124826 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 124825 ctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacc 124766 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 |||| ||| ||||||||||||| ||||| || | |||| |||||||||||||| || Sbjct: 124765 cccatcggggagtgaaatagaacatgaaatcg---taagctttcaagcagtgggaggaga 124709 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 124708 attcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgt 124649 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 ||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 124648 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtc-taacagggcgattgt 124595 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 124594 cactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaa 124535 Query: 577 actaagcagaggtccgaaccgactgatgttgaagaatc 614 | ||| ||||||||||||||||||||||||| |||| Sbjct: 124534 gccaagtggaggtccgaaccgactgatgttgaaaaatc 124497 Score = 436 bits (220), Expect = e-119 Identities = 355/398 (89%), Gaps = 9/398 (2%) Strand = Plus / Plus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 |||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 94981 acccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 95040 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 95041 ctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacc 95100 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 |||| ||| ||||||||||||| ||||| || | |||| |||||||||||||| || Sbjct: 95101 cccatcggggagtgaaatagaacatgaaatcg---taagctttcaagcagtgggaggaga 95157 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 95158 attcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgt 95217 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 ||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 95218 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtc-taacagggcgattgt 95271 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 95272 cactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaa 95331 Query: 577 actaagcagaggtccgaaccgactgatgttgaagaatc 614 | ||| ||||||||||||||||||||||||| |||| Sbjct: 95332 gccaagtggaggtccgaaccgactgatgttgaaaaatc 95369 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125097 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 125038 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 121 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125037 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94769 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 94828 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 121 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94829 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 402 bits (203), Expect = e-109 Identities = 264/281 (93%), Gaps = 5/281 (1%) Strand = Plus / Plus Query: 177 aaagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcac 236 ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagc-cgaaagcatcactagcttacgctctgacccgagtagcatggggcac 61 Query: 237 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 121 Query: 297 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 356 |||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 122 gatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatag 181 Query: 357 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 416 ||| |||||||| | |||||||||||||||||||||| | | ||||||||||||| Sbjct: 182 aacatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtg 237 Query: 417 cctgttgaagaatgagccggcgactcataggcagtggcttg 457 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 cctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 391 bits (197), Expect = e-105 Identities = 238/249 (95%), Gaps = 2/249 (0%) Strand = Plus / Plus Query: 53 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 112 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 113 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 171 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 172 tggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatgg 231 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagc-cgaaagcatcactagcttatgctctgacccgagtagcatgg 179 Query: 232 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 291 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctggg 239 Query: 292 tgaccgata 300 ||||||||| Sbjct: 240 tgaccgata 248
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 391 bits (197), Expect = e-105 Identities = 513/612 (83%), Gaps = 15/612 (2%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 162 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 221 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123 ||||| ||| | |||| |||| ||||||||| || |||| ||||||| || ||||| Sbjct: 222 agtagtggcaaatgaaaagggaacagcctaaatcgctaaaatggggttgggg---agcaa 278 Query: 124 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 183 || ||| || || |||||| || || || |||| | | ||||||||||| | ||||| Sbjct: 279 taaaagtattttgttgctagacggagtagtggagttctgaaccctagatggtgagagtcc 338 Query: 184 agtagcncgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtggaa 242 ||||| |||| |||| ||||||||||| | | ||||||||||||||| || ||||| Sbjct: 339 agtagtat-aaagtatcattagcttatgcttttaacccgagtagcatgggacatatggaa 397 Query: 243 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 302 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 398 tcccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaatagt 457 Query: 303 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 362 |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| || Sbjct: 458 gaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaacatg 517 Query: 363 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 422 ||| | | ||| ||||||||||||||| || || | |||||||| |||||| ||| Sbjct: 518 aaaac---atatgctaccaagcagtgggaggagacaggg--ctctgaccacgtgcccgtt 572 Query: 423 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 482 |||||||||| |||||||||||| | |||||| ||||||||| |||| ||||||||| Sbjct: 573 gaagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccaccggag 627 Query: 483 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 542 || |||||||||| |||||| |||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 628 ccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaacttgggt 687 Query: 543 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 602 |||||| |||||||||||||| | |||| | |||||||| | |||| ||||||||||| Sbjct: 688 gatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccgactga 747 Query: 603 tgttgaagaatc 614 |||||||||||| Sbjct: 748 tgttgaagaatc 759
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 385 bits (194), Expect = e-103 Identities = 278/304 (91%), Gaps = 9/304 (2%) Strand = Plus / Plus Query: 311 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 370 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 371 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 430 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 431 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 490 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 491 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 550 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 551 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 610 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaag 291 Query: 611 aatc 614 |||| Sbjct: 292 aatc 295
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 383 bits (193), Expect = e-103 Identities = 349/397 (87%), Gaps = 8/397 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 458 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 517 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 518 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 577 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 670 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 729 Query: 578 ctaagcagaggtccgaaccgactgatgttgaagaatc 614 || || || |||||||||||| ||||||||| |||| Sbjct: 730 ctcagtggaagtccgaaccgaccgatgttgaaaaatc 766 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 gacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 211 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaacc 97 | |||||||||||||||||| |||| ||| ||||||| Sbjct: 212 cttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 383 bits (193), Expect = e-103 Identities = 349/397 (87%), Gaps = 8/397 (2%) Strand = Plus / Minus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 458 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 517 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 518 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 577 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 114933 Query: 578 ctaagcagaggtccgaaccgactgatgttgaagaatc 614 || || || |||||||||||| ||||||||| |||| Sbjct: 114932 ctcagtggaagtccgaaccgaccgatgttgaaaaatc 114896 Score = 383 bits (193), Expect = e-103 Identities = 349/397 (87%), Gaps = 8/397 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 458 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 517 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 518 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 577 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 87055 Query: 578 ctaagcagaggtccgaaccgactgatgttgaagaatc 614 || || || |||||||||||| ||||||||| |||| Sbjct: 87056 ctcagtggaagtccgaaccgaccgatgttgaaaaatc 87092 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115511 gacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 115452 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaacc 97 | |||||||||||||||||| |||| ||| ||||||| Sbjct: 115451 cttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86477 gacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 86536 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaacc 97 | |||||||||||||||||| |||| ||| ||||||| Sbjct: 86537 cttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 373 bits (188), Expect = e-100 Identities = 389/453 (85%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 162 gcaccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccg 221 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| Sbjct: 4370 gcaccctagacggtgaaagtccagtag-tcgaaagcaacacaagctttagctctaaccca 4428 Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||||||||| |||| | ||||| |||||||| || |||||||||| | ||||||||| Sbjct: 4429 agtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaa 4488 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4489 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 4548 Query: 342 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 401 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| Sbjct: 4549 aggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt 4605 Query: 402 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 461 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 462 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 521 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 522 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 581 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 582 gcagaggtccgaaccgactgatgttgaagaatc 614 | ||||||| ||||||| ||||||||| |||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatc 4817 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4200 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 4259 Query: 64 agtagcggcgagcgaaatgggagcagcctaaa 95 ||||||||||||||||||||||| |||||||| Sbjct: 4260 agtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 373 bits (188), Expect = e-100 Identities = 389/453 (85%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 162 gcaccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccg 221 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| Sbjct: 337 gcaccctagacggtgaaagtccagtag-tcgaaagcaacacaagctttagctctaaccca 395 Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||||||||| |||| | ||||| |||||||| || |||||||||| | ||||||||| Sbjct: 396 agtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaa 455 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 515 Query: 342 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 401 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| Sbjct: 516 aggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt 572 Query: 402 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 461 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 462 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 521 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 522 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 581 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 582 gcagaggtccgaaccgactgatgttgaagaatc 614 | ||||||| ||||||| ||||||||| |||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatc 784 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 167 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 226 Query: 64 agtagcggcgagcgaaatgggagcagcctaaa 95 ||||||||||||||||||||||| |||||||| Sbjct: 227 agtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 373 bits (188), Expect = e-100 Identities = 389/453 (85%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 162 gcaccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccg 221 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| Sbjct: 337 gcaccctagacggtgaaagtccagtag-tcgaaagcaacacaagctttagctctaaccca 395 Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||||||||| |||| | ||||| |||||||| || |||||||||| | ||||||||| Sbjct: 396 agtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaa 455 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 515 Query: 342 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 401 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| Sbjct: 516 aggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt 572 Query: 402 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 461 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 462 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 521 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 522 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 581 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 582 gcagaggtccgaaccgactgatgttgaagaatc 614 | ||||||| ||||||| ||||||||| |||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatc 784 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 167 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 226 Query: 64 agtagcggcgagcgaaatgggagcagcctaaa 95 ||||||||||||||||||||||| |||||||| Sbjct: 227 agtagcggcgagcgaaatgggagaagcctaaa 258
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 371 bits (187), Expect = 2e-99 Identities = 190/191 (99%) Strand = Plus / Plus Query: 424 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 484 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 543 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 544 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 604 gttgaagaatc 614 ||||||||||| Sbjct: 182 gttgaagaatc 192
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 369 bits (186), Expect = 7e-99 Identities = 189/190 (99%) Strand = Plus / Plus Query: 425 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 485 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 544 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 545 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 605 ttgaagaatc 614 |||||||||| Sbjct: 181 ttgaagaatc 190
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 363 bits (183), Expect = 4e-97 Identities = 245/262 (93%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2763 gacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 2822 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 2882 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaa 178 | ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | Sbjct: 2883 ctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgag 2942 Query: 179 agtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 238 ||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||| Sbjct: 2943 agtccagtagc-cgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgt 3000 Query: 239 ggaatcccgtgtgaatcagcaa 260 |||||||||||||||||||||| Sbjct: 3001 ggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 363 bits (183), Expect = 4e-97 Identities = 245/262 (93%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1018 gacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 1077 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 1137 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaa 178 | ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | Sbjct: 1138 ctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgag 1197 Query: 179 agtccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 238 ||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||| Sbjct: 1198 agtccagtagc-cgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgt 1255 Query: 239 ggaatcccgtgtgaatcagcaa 260 |||||||||||||||||||||| Sbjct: 1256 ggaatcccgtgtgaatcagcaa 1277
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 359 bits (181), Expect = 7e-96 Identities = 274/302 (90%), Gaps = 11/302 (3%) Strand = Plus / Plus Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 372 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 373 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 432 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 433 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 492 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 493 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 552 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 553 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 612 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 613 tc 614 || Sbjct: 290 tc 291
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 355 bits (179), Expect = 1e-94 Identities = 341/393 (86%), Gaps = 9/393 (2%) Strand = Plus / Plus Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 342 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 401 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggaggaggattga 561 Query: 402 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 461 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 462 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 521 |||||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 agggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675 Query: 522 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 581 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| || Sbjct: 676 tttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaa 735 Query: 582 gcagaggtccgaaccgactgatgttgaagaatc 614 | ||||||||||||||||||||||||| |||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatc 768 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || Sbjct: 176 gaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagtagtgg 235 Query: 72 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 117 ||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 236 cgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 353 bits (178), Expect = 4e-94 Identities = 344/398 (86%), Gaps = 11/398 (2%) Strand = Plus / Plus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 ||||||| ||| || ||||||||||||||||| |||| | || |||| ||| Sbjct: 574 ggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatgt 625 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| Sbjct: 626 cactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaa 685 Query: 577 actaagcagaggtccgaaccgactgatgttgaagaatc 614 | ||| ||||||||||||||||||||||||| |||| Sbjct: 686 gccaagtggaggtccgaaccgactgatgttgaaaaatc 723 Score = 155 bits (78), Expect = 2e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctc 181 Query: 64 agtagcggcgagcgaaatgggagcagcctaaacc 97 ||||| |||||||||||||||| ||||||||||| Sbjct: 182 agtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 345 bits (174), Expect = 1e-91 Identities = 348/404 (86%), Gaps = 4/404 (0%) Strand = Plus / Plus Query: 211 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 270 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 271 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 330 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 331 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 390 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 391 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 450 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 451 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 510 ||||| ||||||||||| | ||| |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcagggc 675 Query: 511 gattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttg 570 |||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttg 735 Query: 571 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 614 | |||||||||| ||||||| ||||||| ||||||||| |||| Sbjct: 736 ggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatc 779 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 165 gacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttc 224 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaa 95 | ||||||||||||||||||||||| |||||||| Sbjct: 225 ctgagtagcggcgagcgaaatgggagaagcctaaa 259
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 341 bits (172), Expect = 2e-90 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 162 gcaccctagatggctaaagtccagtagcncgaaagcatcactagcttatgctctgacccg 221 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagc-cgaaagcatcactagcttatgctctgacccg 68 Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 69 agtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaa 128 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 129 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 188 Query: 342 tgggtagtgaaatagaacgtgaaaccgt 369 ||| ||||||||||||| ||||||||| Sbjct: 189 cggggagtgaaatagaacatgaaaccgt 216
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 339 bits (171), Expect = 7e-90 Identities = 250/275 (90%), Gaps = 1/275 (0%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 3651 gacaacctggcaaactgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcc 3592 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 ||||||| || |||| ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 3591 cgtagtaacgacgagtgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagag 3532 Query: 121 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 180 |||| ||| ||| |||| ||||||| ||||||| ||||| |||||||||||||| | || Sbjct: 3531 caatgcaaacgtagtgccgctaggcaaagcggtggagtgttgcaccctagatggcgagag 3472 Query: 181 tccagtagcncgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 240 | |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 3471 tttagtagc-cgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtgg 3413 Query: 241 aatcccgtgtgaatcagcaaggaccaccttgcaag 275 |||||||||||||| |||||||||||||||||||| Sbjct: 3412 aatcccgtgtgaattagcaaggaccaccttgcaag 3378 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 524 tatggacccgaacct 538 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 284 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 343 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 344 ggtagtgaaatagaacgtgaaacc 367 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 557 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 614 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatc 3054
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 339 bits (171), Expect = 7e-90 Identities = 201/211 (95%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatc 267
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 339 bits (171), Expect = 7e-90 Identities = 201/211 (95%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatc 251
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 312 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 371 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 372 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 431 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 432 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 323 bits (163), Expect = 4e-85 Identities = 200/211 (94%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||| ||||||||||||||||||||| Sbjct: 177580 ggaggtccg-accgactgatgttgaagaatc 177609 Score = 295 bits (149), Expect = 9e-77 Identities = 202/217 (93%), Gaps = 2/217 (0%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177197 aaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 177256 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177257 agtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaa 177316 Query: 124 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 182 ||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 177317 tacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 177376 Query: 183 cagtagcncgaaagcatcactagcttatgctctgacc 219 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 177377 cagtagc-cgaaagcatcactagcttaggctctgacc 177412 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagc 32 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagc 32 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 315 bits (159), Expect = 9e-83 Identities = 244/269 (90%), Gaps = 10/269 (3%) Strand = Plus / Plus Query: 347 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 406 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 467 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 525 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 526 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 585 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 586 aggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||| |||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatc 364949 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 292 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 311 bits (157), Expect = 1e-81 Identities = 334/393 (84%), Gaps = 10/393 (2%) Strand = Plus / Plus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 516 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 517 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 576 ||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaa 1133 Query: 577 actaagcagaggtccgaaccgactgatgttgaa 609 | ||| |||| |||||||||||| ||||||| Sbjct: 1134 gccaagtggaggcccgaaccgactggtgttgaa 1166 Score = 141 bits (71), Expect = 3e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 565 gacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcc 624 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 99 | |||||| ||||||||||| |||| ||||||||||||| Sbjct: 625 cttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 303 bits (153), Expect = 4e-79 Identities = 300/345 (86%), Gaps = 13/345 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 458 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 514 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 515 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 559 |||||| |||||||||||||||| || ||||||||||||| |||| Sbjct: 661 gtcacttcttatggacccgaaccgggatgatctatccatggccag 705 Score = 101 bits (51), Expect = 3e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||| || ||| ||||||||||||||| || |||||||||||||||||||||||| | Sbjct: 144 gacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcgatttc 203 Query: 61 cgtagtagcggcgagcgaa 79 | ||||||||||||||||| Sbjct: 204 cttagtagcggcgagcgaa 222
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 289 bits (146), Expect = 5e-75 Identities = 341/400 (85%), Gaps = 12/400 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 336 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 457 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc--gatt 514 ||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| || Sbjct: 590 ggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatc 645 Query: 515 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 574 |||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 646 gtcactttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 705 Query: 575 aaactaagcagaggtccgaaccgactgatgttgaagaatc 614 |||| ||| ||||||||||||||| ||||||||| |||| Sbjct: 706 aaaccaagtggaggtccgaaccgaccgatgttgaaaaatc 745 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaac 96 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 278 bits (140), Expect = 2e-71 Identities = 195/212 (91%), Gaps = 6/212 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 462 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 463 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 522 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 523 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 582 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 583 cagaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatc 226
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 170 gatggctaaagtccagtagcncgaaagcatcactagcttatgctctgaccc-gagtagca 228 ||||| |||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||| Sbjct: 95252 gatggataaaatccagtagc-cgaaagcatcactagcttacgctctaaccccgagtagca 95310 Query: 229 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 288 |||| ||||||||||| ||||||| || |||| ||||||||||||||||||||||||| Sbjct: 95311 tgggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcct 95370 Query: 289 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 348 |||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 95371 gggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtag 95430 Query: 349 tgaaatagaacgtgaaaccgtgctgagctcc 379 ||||||||||||||||||||||||||||||| Sbjct: 95431 tgaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 170 gatggctaaagtccagtagcncgaaagcatcactagcttatgctctgaccc-gagtagca 228 ||||| |||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||| Sbjct: 937 gatggataaaatccagtagc-cgaaagcatcactagcttacgctctaaccccgagtagca 879 Query: 229 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 288 |||| ||||||||||| ||||||| || |||| ||||||||||||||||||||||||| Sbjct: 878 tgggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcct 819 Query: 289 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 348 |||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 818 gggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtag 759 Query: 349 tgaaatagaacgtgaaaccgtgctgagctcc 379 ||||||||||||||||||||||||||||||| Sbjct: 758 tgaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 170 gatggctaaagtccagtagcncgaaagcatcactagcttatgctctgaccc-gagtagca 228 ||||| |||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||| Sbjct: 11893525 gatggataaaatccagtagc-cgaaagcatcactagcttacgctctaaccccgagtagca 11893583 Query: 229 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 288 |||| ||||||||||| ||||||| || |||| ||||||||||||||||||||||||| Sbjct: 11893584 tgggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcct 11893643 Query: 289 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 348 |||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 11893644 gggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtag 11893703 Query: 349 tgaaatagaacgtgaaaccgtgctgagctcc 379 ||||||||||||||||||||||||||||||| Sbjct: 11893704 tgaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 54.0 bits (27), Expect = 6e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 427 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 486 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 487 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 544 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9056697 Query: 545 tctatccatgaccaggat 562 | |||||||||| ||||| Sbjct: 9056698 tttatccatgactaggat 9056715 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 tgagctcccaagcagtgggaggggaaagtgatc 404 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 276 bits (139), Expect = 8e-71 Identities = 195/211 (92%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 170 gatggctaaagtccagtagcncgaaagcatcactagcttatgctctgaccc-gagtagca 228 ||||| |||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||| Sbjct: 11971932 gatggataaaatccagtagc-cgaaagcatcactagcttacgctctaaccccgagtagca 11971990 Query: 229 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 288 |||| ||||||||||| ||||||| || |||| ||||||||||||||||||||||||| Sbjct: 11971991 tgggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcct 11972050 Query: 289 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 348 |||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 11972051 gggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtag 11972110 Query: 349 tgaaatagaacgtgaaaccgtgctgagctcc 379 ||||||||||||||||||||||||||||||| Sbjct: 11972111 tgaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 427 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 486 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 487 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 544 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9128394 Query: 545 tctatccatgaccaggat 562 | |||||||||| ||||| Sbjct: 9128395 tttatccatgactaggat 9128412 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 tgagctcccaagcagtgggaggggaaagtgatc 404 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 458 gttaagg 464 ||||||| Sbjct: 644 gttaagg 650 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||||| || Sbjct: 154 caacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgatttcct 213 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaac 96 ||||||||||||||||| || | |||||||||| Sbjct: 214 gagtagcggcgagcgaaacggaatcagcctaaac 247 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 515 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 567 |||||| |||||||||||||||| || ||||||| |||| |||| ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatctaggcatggccagaatgaagc 774
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 262 bits (132), Expect = 1e-66 Identities = 132/132 (100%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 121 caatacaagcgt 132 |||||||||||| Sbjct: 282 caatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 262 bits (132), Expect = 1e-66 Identities = 132/132 (100%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 121 caatacaagcgt 132 |||||||||||| Sbjct: 282 caatacaagcgt 293
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 212 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 271 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 272 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 331 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 332 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 391 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 392 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 451 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 452 ggcttggttaagg 464 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 64 agtagcggcgagcgaaatgggagcagcctaaacc 97 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 476 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 535 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 536 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 595 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 596 cgactgatgttgaa 609 |||||| ||||||| Sbjct: 712 cgactggtgttgaa 725
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 250 bits (126), Expect = 5e-63 Identities = 141/146 (96%) Strand = Plus / Plus Query: 469 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 528 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 529 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 588 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 589 tccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatc 150
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 458 gttaagg 464 ||||||| Sbjct: 611 gttaagg 617 Score = 133 bits (67), Expect = 8e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 163 gaactgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcgg 222 Query: 72 cgagcgaaatgggagcagcctaaaccg 98 ||||||||| |||| |||||||||||| Sbjct: 223 cgagcgaaacgggaccagcctaaaccg 249 Score = 95.6 bits (48), Expect = 2e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 476 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 535 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 536 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 595 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 596 cgactgatgttgaaga 611 |||| || |||||||| Sbjct: 744 cgaccgacgttgaaga 759
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 154 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 213 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccg 98 |||||||||||||| || |||| |||||||||||| Sbjct: 214 gagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 710 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 769 Query: 599 ctgatgttgaagaatc 614 | ||||||||| |||| Sbjct: 770 ccgatgttgaaaaatc 785
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1920 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 1979 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccg 98 |||||||||||||| || |||| |||||||||||| Sbjct: 1980 gagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 2479 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 2538 Query: 599 ctgatgttgaagaatc 614 | ||||||||| |||| Sbjct: 2539 ccgatgttgaaaaatc 2554
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 238 bits (120), Expect = 2e-59 Identities = 187/208 (89%), Gaps = 6/208 (2%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 466 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 467 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 526 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 527 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 586 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 587 ggtccgaaccgactgatgttgaagaatc 614 ||||||||||||||||||||||| |||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatc 768 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 342 tgggtagtgaaatagaacgtgaaacc 367 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 176 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 235 Query: 72 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 ||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 236 cgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 238 bits (120), Expect = 2e-59 Identities = 187/208 (89%), Gaps = 6/208 (2%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 466 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 467 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 526 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 527 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 586 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 587 ggtccgaaccgactgatgttgaagaatc 614 ||||||||||||||||||||||| |||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatc 3802 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 342 tgggtagtgaaatagaacgtgaaacc 367 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 3210 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 3269 Query: 72 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 119 ||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3270 cgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 226 bits (114), Expect = 7e-56 Identities = 145/154 (94%), Gaps = 1/154 (0%) Strand = Plus / Minus Query: 145 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagcncgaaagcatcacta 204 |||||| || || ||| |||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagc-cgaaagcatcacta 271 Query: 205 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 264 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 211 Query: 265 caccttgcaaggctaaatactcctgggtgaccga 298 ||||||||||||||||||||||||| | |||||| Sbjct: 210 caccttgcaaggctaaatactcctgcgggaccga 177
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 224 bits (113), Expect = 3e-55 Identities = 158/173 (91%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||| Sbjct: 360 aaagtatcattagcttatgctttgactcgagtagcatgggacacgtggaatcccgtgtga 419 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||| |||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 420 atcagcaaggatcaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 479 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| ||||||||||||| | | |||| ||||||||||||| ||||| Sbjct: 480 cgtgagggaagggtgaaaagaacctctactggggagtgaaatagaacatgaaa 532 Score = 218 bits (110), Expect = 2e-53 Identities = 187/211 (88%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 |||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatc 771 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||| || | Sbjct: 163 aacctggtgaactgaatcatcttagtagacagaggaaaataaagcaaaagttattaccat 222 Query: 64 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 112 ||||| |||||| |||| |||| |||||||||||| |||| ||||||| Sbjct: 223 agtagtggcgagtgaaaagggaacagcctaaaccgctaaaatggggttg 271
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 220 bits (111), Expect = 4e-54 Identities = 114/115 (99%) Strand = Plus / Minus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79607 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 79548 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 115 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79547 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 395 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 396 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 455 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 456 tggttaagg 464 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 515 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 559 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 395 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 396 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 455 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 456 tggttaagg 464 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 515 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 559 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 336 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 395 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 396 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 455 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 456 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 508 Score = 99.6 bits (50), Expect = 1e-17 Identities = 172/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| || ||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatc 746 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 520 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 579 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 580 aagcagaggtccgaaccgactgatgttgaagaatc 614 ||| ||||||||||| |||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 gg 465 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggag 86 ||| ||||| ||||| Sbjct: 232 cgaacgaaaagggag 246
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 336 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 395 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 396 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 455 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 456 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 508 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatc 746 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 |||| |||||||||||||||||||||| ||||||||||| |||||||||| |||||| | Sbjct: 164 aacccggcgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccat 223 Query: 64 agtagcggcgagcgaaatgggagcagcctaa 94 ||||| ||||| ||||| |||| || ||||| Sbjct: 224 agtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 216 bits (109), Expect = 6e-53 Identities = 157/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||||||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggagcagcctaa 94 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 |||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||| Sbjct: 154 caacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcgattccct 213 Query: 63 tagtagcggcgagcgaaatggga 85 ||||||||||||||||||||||| Sbjct: 214 tagtagcggcgagcgaaatggga 236 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 515 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 566 |||||| ||||||||||||||||||| ||||||| |||||| || ||||||| Sbjct: 806 gtcacttcttatggacccgaacctggatgatctaaccatgagcatgatgaag 857
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccg 368 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 155 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcgg 214 Query: 72 cgagcgaaatgggagcagcctaaacc 97 ||||||||| |||| ||||||||||| Sbjct: 215 cgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgact 441 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 487 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 544 ||||||||||||||| |||||||| | |||| | |||| ||||||||||| || || Sbjct: 873 agcgaaagcgagtctgaatagggcatataagtcatttcttacggacccgaacccggtcga 932 Query: 545 tctatccatgaccaggatgaagct 568 |||| ||||| ||||||||||||| Sbjct: 933 tctaaccatgtccaggatgaagct 956
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 208 bits (105), Expect = 2e-50 Identities = 156/173 (90%) Strand = Plus / Plus Query: 193 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 252 |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||| ||||| Sbjct: 337 aaagtatcattagcttatgctttgacccgagtagcatgggacacggagaatcccatgtga 396 Query: 253 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 312 ||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||||||| Sbjct: 397 atcagcaaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtac 456 Query: 313 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 365 |||||||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 457 cgtgagggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 107 bits (54), Expect = 4e-20 Identities = 173/211 (81%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 404 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 463 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 464 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 523 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 ||||||||||| |||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatc 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 72 cgagcgaaatgggag 86 ||| ||||| ||||| Sbjct: 232 cgaacgaaaagggag 246
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 156 gaactgaaacatctaagtagccggaggaaaagaaagcaaaagcgattcccttagtagcgg 215 Query: 72 cgagcgaaatgggagcagcctaaacc 97 ||||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaaagggaacagcctaaacc 241 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 522 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 581 |||| ||||||||||| || |||||| ||||| |||||||||||||||| | | ||||| Sbjct: 1030 cttacggacccgaacccggtcgatctaaccatgtccaggatgaagcttgggtaacactaa 1089 Query: 582 gcagaggtccgaaccgactgatgttgaagaatc 614 | |||||||| |||||| ||||||||| |||| Sbjct: 1090 gtagaggtcccgaccgaccgatgttgaaaaatc 1122 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgact 441 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 76 cgaaatgggagcagcctaaacc 97 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 526 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 585 |||||||||||| |||||||||| ||||||||||||||||||||| | | |||||| | Sbjct: 712 tggacccgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacactaagtgg 771 Query: 586 aggtccgaaccgactgatgttgaagaatc 614 |||||||||||||| ||||||||| |||| Sbjct: 772 aggtccgaaccgaccgatgttgaaaaatc 800 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 405 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 gcgaaagcgagtcttaatagggcga 512 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 395 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 396 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 453 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 81.8 bits (41), Expect = 2e-12 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 476 accggagccgtagcgaaagcgagtcttaatagggcgatt---gtcactgcttatggaccc 532 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 533 gaacctgggtgatctatccatgaccag 559 ||||| ||||||||||| ||||||||| Sbjct: 745 gaacccgggtgatctattcatgaccag 771
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 336 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 457 ggttaagg 464 |||||||| Sbjct: 675 ggttaagg 682 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 ||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 147 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccg 206 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccg 98 ||||||||||||||||| |||| |||||||||||| Sbjct: 207 gagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 534 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 535 acctgggtgatctatccatgaccaggatgaagcttgg 571 ||| |||||||||| | |||||||||||||| |||| Sbjct: 751 acccgggtgatctaatcctgaccaggatgaagtttgg 787
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 217 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 276 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 277 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 337 cc 338 || Sbjct: 493 cc 494 Score = 147 bits (74), Expect = 5e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 153 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgcgattcc 212 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 98 | ||||||||||||||||| |||| ||||||||||| Sbjct: 213 cttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 408 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 514 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 569 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 222 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 281 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 282 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 341 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 342 tgggtagtgaaatagaacgtgaaacc 367 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 1943 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 2002 Query: 72 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 117 ||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 2003 cgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 336 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 337 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 395 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 396 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 455 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 456 tggttaagg 464 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 336 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 337 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 395 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 396 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 455 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 456 tggttaagg 464 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Minus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 156132 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 156073 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaacc 97 |||||||||||||||||||||| ||||||||||| Sbjct: 156072 gagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 77760 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 77819 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaacc 97 |||||||||||||||||||||| ||||||||||| Sbjct: 77820 gagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 105 bits (53), Expect = 2e-19 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 534 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 |||||| ||||||| |||| ||||| |||||||||| | | || ||| |||| ||||| Sbjct: 155526 acctggatgatctaatcatggccaggttgaagcttgggtaacaccaagtcgaggaccgaa 155467 Query: 595 ccgactgatgttgaagaatc 614 ||||| ||||||||| |||| Sbjct: 155466 ccgaccgatgttgaaaaatc 155447 Score = 105 bits (53), Expect = 2e-19 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 534 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 |||||| ||||||| |||| ||||| |||||||||| | | || ||| |||| ||||| Sbjct: 78366 acctggatgatctaatcatggccaggttgaagcttgggtaacaccaagtcgaggaccgaa 78425 Query: 595 ccgactgatgttgaagaatc 614 ||||| ||||||||| |||| Sbjct: 78426 ccgaccgatgttgaaaaatc 78445
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 278 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 394 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 395 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 455 tt 456 || Sbjct: 636 tt 637 Score = 107 bits (54), Expect = 4e-20 Identities = 111/129 (86%), Gaps = 2/129 (1%) Strand = Plus / Plus Query: 488 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 545 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 546 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 605 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 786 Query: 606 tgaagaatc 614 |||| |||| Sbjct: 787 tgaaaaatc 795 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 76 cgaa 79 |||| Sbjct: 238 cgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 76 cgaaatgggagcagcctaaacc 97 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 83.8 bits (42), Expect = 6e-13 Identities = 116/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 536 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 537 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 596 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 597 gactgatgttgaagaatc 614 ||| ||||||||| |||| Sbjct: 938 gaccgatgttgaaaaatc 955 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 133 bits (67), Expect = 8e-28 Identities = 122/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 535 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 536 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 595 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 596 cgactgatgttgaagaatc 614 |||| ||||||||| |||| Sbjct: 768 cgaccgatgttgaaaaatc 786 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 72 cgagcgaaatgggagcagcctaaac 96 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 455 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 533 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 820 Query: 594 accgactgatgttgaagaatc 614 |||||| ||||||||| |||| Sbjct: 821 accgaccgatgttgaaaaatc 841 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 76 cgaaatgggagcagcctaaacc 97 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 462 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 74/88 (84%), Gaps = 4/88 (4%) Strand = Plus / Plus Query: 488 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaacctgggtg 543 |||||||||||||| || |||||| |||||||| ||| |||||||||||| |||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaacccaggtg 732 Query: 544 atctatccatgaccaggatgaagcttgg 571 ||||| |||||||||| |||||||||| Sbjct: 733 atctaaccatgaccagattgaagcttgg 760
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 278 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 394 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 395 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 455 tt 456 || Sbjct: 617 tt 618 Score = 107 bits (54), Expect = 4e-20 Identities = 111/129 (86%), Gaps = 2/129 (1%) Strand = Plus / Plus Query: 488 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 545 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 707 Query: 546 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 605 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 708 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 767 Query: 606 tgaagaatc 614 |||| |||| Sbjct: 768 tgaaaaatc 776 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 76 cgaa 79 |||| Sbjct: 219 cgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Minus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 533 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 151680 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 151621 Query: 594 accgactgatgttgaagaatc 614 |||||| ||||||||| |||| Sbjct: 151620 accgaccgatgttgaaaaatc 151600 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 533 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 42523 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 42582 Query: 594 accgactgatgttgaagaatc 614 |||||| ||||||||| |||| Sbjct: 42583 accgaccgatgttgaaaaatc 42603 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 278 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 336 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 394 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 395 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 455 tt 456 || Sbjct: 636 tt 637 Score = 107 bits (54), Expect = 4e-20 Identities = 111/129 (86%), Gaps = 2/129 (1%) Strand = Plus / Plus Query: 488 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 545 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 546 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 605 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 786 Query: 606 tgaagaatc 614 |||| |||| Sbjct: 787 tgaaaaatc 795 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 76 cgaa 79 |||| Sbjct: 238 cgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 533 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 820 Query: 594 accgactgatgttgaagaatc 614 |||||| ||||||||| |||| Sbjct: 821 accgaccgatgttgaaaaatc 841 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 133 bits (67), Expect = 8e-28 Identities = 122/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 535 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 536 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 595 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 596 cgactgatgttgaagaatc 614 |||| ||||||||| |||| Sbjct: 768 cgaccgatgttgaaaaatc 786 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 72 cgagcgaaatgggagcagcctaaac 96 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 455 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 533 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 695 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 754 Query: 594 accgactgatgttgaagaatc 614 |||||| ||||||||| |||| Sbjct: 755 accgaccgatgttgaaaaatc 775 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/96 (87%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 533 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 534 aacctgggtgatctatccatgaccaggatgaagctt 569 |||| ||||||||||| |||| || ||||||||||| Sbjct: 780 aacccgggtgatctattcatggcc-ggatgaagctt 814
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 221 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 280 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 281 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 340 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 341 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 400 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 401 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 449 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 490 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 549 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 550 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 609 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 610 gaatc 614 |||| Sbjct: 382 aaatc 386
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 338 ccagtgggtagtgaaatagaacgtgaaacc 367 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/140 (84%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 534 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 595 ccgactgatgttgaagaatc 614 ||||| ||||||||| |||| Sbjct: 741 ccgaccgatgttgaaaaatc 760 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgact 441 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 326 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 385 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 386 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 435 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 338 ccagtgggtagtgaaatagaacgtgaaacc 367 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/140 (84%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 534 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 535 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 594 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 595 ccgactgatgttgaagaatc 614 ||||| ||||||||| |||| Sbjct: 25550 ccgaccgatgttgaaaaatc 25569 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgact 441 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 221 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 280 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 281 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 340 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 341 gtgggtagtgaaatagaacgtgaaaccgt 369 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 107 bits (54), Expect = 4e-20 Identities = 117/138 (84%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 536 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 537 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 596 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 597 gactgatgttgaagaatc 614 ||||||||||||| |||| Sbjct: 369 gactgatgttgaaaaatc 386 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 414 gtgcctgttgaagaatgagccggcgactcatagg 447 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 336 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 396 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 441 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 146 caacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcgattcccg 205 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccg 98 ||||||||||||||||| |||| |||||||||||| Sbjct: 206 gagtagcggcgagcgaaaagggaacagcctaaaccg 241 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 523 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 582 ||||||||||||||| |||||||||| | | ||||||||||| |||| | | || || Sbjct: 804 ttatggacccgaacccgggtgatctaatcctttccaggatgaagtttgggtcacaccaaa 863 Query: 583 cagaggtccgaaccgactgatgttgaagaatc 614 ||||||||||||||||||||||||| |||| Sbjct: 864 tggaggtccgaaccgactgatgttgaaaaatc 895
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 133 bits (67), Expect = 8e-28 Identities = 123/141 (87%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 533 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 534 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 593 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 594 accgactgatgttgaagaatc 614 |||||| ||||||||| |||| Sbjct: 764 accgaccgatgttgaaaaatc 784 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 398 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 457 ggttaagg 464 |||||||| Sbjct: 800 ggttaagg 807 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%), Gaps = 5/143 (3%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 531 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 532 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 591 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 592 gaaccgactgatgttgaagaatc 614 |||||||| ||||||||| |||| Sbjct: 936 gaaccgaccgatgttgaaaaatc 958 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 158 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 217 Query: 76 cgaaatgggagcagcctaaacc 97 |||| |||| ||||||||||| Sbjct: 218 cgaaccgggatcagcctaaacc 239
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 129 bits (65), Expect = 1e-26 Identities = 119/136 (87%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 481 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 538 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 599 ctgatgttgaagaatc 614 | ||||||||| |||| Sbjct: 776 ccgatgttgaaaaatc 791 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 465 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 393 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 393 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Minus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 171352 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 171293 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccg 98 ||||||||||||||| | |||| |||||||||||| Sbjct: 171292 cagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 121574 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 121633 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccg 98 ||||||||||||||| | |||| |||||||||||| Sbjct: 121634 cagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 536 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 170874 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 170815 Query: 537 ctgggtgatctatccatgaccaggatgaagcttgg 571 | |||||||||| |||||||||||||||||||||| Sbjct: 170814 ccgggtgatctaaccatgaccaggatgaagcttgg 170780 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 536 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 122052 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 122111 Query: 537 ctgggtgatctatccatgaccaggatgaagcttgg 571 | |||||||||| |||||||||||||||||||||| Sbjct: 122112 ccgggtgatctaaccatgaccaggatgaagcttgg 122146
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 393 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 3 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 62 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 165 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 224 Query: 63 tagtagcggcgagcgaaatgggagcagcctaaaccg 98 ||||||||||||||| | |||| |||||||||||| Sbjct: 225 cagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 477 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 536 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 643 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 702 Query: 537 ctgggtgatctatccatgaccaggatgaagcttgg 571 | |||||||||| |||||||||||||||||||||| Sbjct: 703 ccgggtgatctaaccatgaccaggatgaagcttgg 737
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 186 bits (94), Expect = 6e-44 Identities = 328/399 (82%), Gaps = 9/399 (2%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 2137 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 2196 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||| ||||| |||||||||| ||| ||||||| || ||||||||||||||||| Sbjct: 2197 taaatattcctgaatgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaaccc 2256 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 397 | | ||| ||||||||||||| |||||||| | |||| |||||||||||||| | Sbjct: 2257 cgggaggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggacga 2313 Query: 398 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 457 | | ||||||| ||||| ||||||||||||||||||||||| || |||||||| | Sbjct: 2314 cttaacgtctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggc-ag 2372 Query: 458 gttaagg-gaacggaacccaccggagccgtagcgaaagcgagtcttaat-agggcgattg 515 ||||||| | | ||| ||||||||| ||| ||||||||| ||| || || ||| | | Sbjct: 2373 gttaaggcgtaaagaa--taccggagccatagtgaaagcgag-cttgataagagcgttcg 2429 Query: 516 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 575 |||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | Sbjct: 2430 tcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaa 2489 Query: 576 aactaagcagaggtccgaaccgactgatgttgaagaatc 614 |||||| ||||||||||||||||||||||||| |||| Sbjct: 2490 cactaagtggaggtccgaaccgactgatgttgaaaaatc 2528 Score = 155 bits (78), Expect = 2e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 4 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 63 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 64 agtagcggcgagcgaaatgggagcagcctaaacc 97 |||||||||||||||||||||| ||||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 336 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 337 cccagtgggtagtgaaatagaacgtgaaaccgt 369 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 180 bits (91), Expect = 4e-42 Identities = 182/211 (86%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 465 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 466 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 523 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 524 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 583 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 584 agaggtccgaaccgactgatgttgaagaatc 614 || |||||||||||| ||||||||| |||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatc 835 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 16 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 75 ||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 167 tgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcccttagtagcggcgag 226 Query: 76 cgaaatgggagcagcctaaaccg 98 |||||||||| |||||||||||| Sbjct: 227 cgaaatgggaacagcctaaaccg 249
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 336 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 337 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 393 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 394 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 447 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 487 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaacctgggtga 544 ||||||||||||||| ||||||||| | ||||| | ||||||||||||||||||| ||| Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacctggatga 702 Query: 545 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 604 |||| ||||| |||||||||||||||| | | || || ||||||||||||||| |||| Sbjct: 703 tctaaccatggccaggatgaagcttgggtaacaccaattggaggtccgaaccgaccgatg 762 Query: 605 ttgaagaatc 614 ||||| |||| Sbjct: 763 ttgaaaaatc 772 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 69 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 70 ggcgagcgaaatgggagcagcctaaac 96 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgt 369 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 476 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 535 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 536 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 595 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 596 cgactgatgttgaagaatc 614 |||| ||||||||| |||| Sbjct: 742 cgaccgatgttgaaaaatc 760 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||| |||||| |||||||||||||||||| | ||||||||||||||| |||||||| Sbjct: 152 gacaacccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcc 211 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 98 | |||||| ||||||||||| |||| ||| |||||||| Sbjct: 212 cttagtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 405 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 338 ccagtgggtagtgaaatagaacgtgaaacc 367 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 105 bits (53), Expect = 2e-19 Identities = 112/131 (85%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 487 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 543 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 544 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 603 |||||| |||||||||| |||||||| | | | |||| |||| |||||||||| ||| Sbjct: 719 atctattcatgaccaggttgaagcttttgtaacaataagtggaggaccgaaccgaccgat 778 Query: 604 gttgaagaatc 614 |||||| |||| Sbjct: 779 gttgaaaaatc 789 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 72 cgagcgaaatgggagcagcctaaacc 97 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 338 ccagtgggtagtgaaatagaacgtgaaacc 367 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 72 cgagcgaaatgggagcagcctaaacc 97 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 528 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 587 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 547 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 606 Query: 588 gtccgaaccgactgatgttgaa 609 ||||||||| |||||||||||| Sbjct: 607 gtccgaacccactgatgttgaa 628 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgact 441 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 338 ccagtgggtagtgaaatagaacgtgaaacc 367 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 105 bits (53), Expect = 2e-19 Identities = 112/131 (85%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 487 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 543 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 544 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 603 |||||| |||||||||| |||||||| | | | |||| |||| |||||||||| ||| Sbjct: 719 atctattcatgaccaggttgaagcttttgtaacaataagtggaggaccgaaccgaccgat 778 Query: 604 gttgaagaatc 614 |||||| |||| Sbjct: 779 gttgaaaaatc 789 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 406 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 464 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 12 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 71 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 72 cgagcgaaatgggagcagcctaaacc 97 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 396 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 397 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 456 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 457 ggttaa 462 |||||| Sbjct: 731 ggttaa 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 514 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 573 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 574 gaaactaagcagaggtccgaaccgactgatgttgaagaatc 614 |||| ||| ||||||||||||||| ||||||||| |||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaaaaatc 886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 17 gaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagc 76 |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 280 gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgagc 339 Query: 77 gaaatgggagcagcctaaacc 97 ||||| | ||||||||||| Sbjct: 340 gaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 221 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 280 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 281 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 340 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 341 gtgggtagtgaaatagaacgtgaaaccgt 369 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 487 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 546 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 547 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 606 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 607 gaagaatc 614 ||| |||| Sbjct: 382 gaaaaatc 389 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 405 tctgaccgcgtgcctgttgaagaatgagccggcga 439 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 338 ccagt-gggtagtgaaatagaacgtgaaaccgt 369 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 1 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 60 ||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 152 gacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcc 211 Query: 61 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 98 ||||||||||||||||||| ||||| |||||||||||| Sbjct: 212 cgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 133 bits (67), Expect = 8e-28 Identities = 173/208 (83%), Gaps = 4/208 (1%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 466 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 467 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 526 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 527 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 586 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 587 ggtccgaaccgactgatgttgaagaatc 614 |||||||||||| ||||||||| |||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatc 917
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtg 370 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 135 bits (68), Expect = 2e-28 Identities = 119/136 (87%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 599 ctgatgttgaagaatc 614 ||||||||||| |||| Sbjct: 592 ctgatgttgaaaaatc 607 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 69 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 70 ggcgagcgaaatgggagcagcctaaacc 97 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 447 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtg 370 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 135 bits (68), Expect = 2e-28 Identities = 119/136 (87%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 599 ctgatgttgaagaatc 614 ||||||||||| |||| Sbjct: 592 ctgatgttgaaaaatc 607 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 69 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 70 ggcgagcgaaatgggagcagcctaaacc 97 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 447 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtg 370 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 599 ctgatgttgaa 609 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 13 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 72 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 73 gagcgaaatgggagcagcctaaacc 97 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtg 370 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 599 ctgatgttgaa 609 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 69 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 70 ggcgagcgaaatgggagcagcctaaacc 97 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtg 370 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 135 bits (68), Expect = 2e-28 Identities = 119/136 (87%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 599 ctgatgttgaagaatc 614 ||||||||||| |||| Sbjct: 592 ctgatgttgaaaaatc 607 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 69 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 70 ggcgagcgaaatgggagcagcctaaacc 97 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 447 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtg 370 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 599 ctgatgttgaa 609 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 69 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 70 ggcgagcgaaatgggagcagcctaaacc 97 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 218 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 277 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 278 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 337 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 338 ccagtgggtagtgaaatagaacgtgaaaccgtg 370 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 479 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 538 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 539 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 598 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 599 ctgatgttgaa 609 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 10 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 69 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 70 ggcgagcgaaatgggagcagcctaaacc 97 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 407 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 454 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,900,015 Number of Sequences: 3902068 Number of extensions: 3900015 Number of successful extensions: 121606 Number of sequences better than 10.0: 26561 Number of HSP's better than 10.0 without gapping: 26390 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 74236 Number of HSP's gapped (non-prelim): 45206 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
