ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3g22 |
|---|---|
| Clone Library Name | barley_pub |
>BGS4_SCHPO (O74475) 1,3-beta-glucan synthase component bgs4 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1955 Score = 138 bits (347), Expect = 1e-32 Identities = 71/164 (43%), Positives = 101/164 (61%) Frame = +2 Query: 26 ILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRG 205 ILG RE+IF+ ++ L + +E +F T+ R LA + + HYGHPD + +F TRG Sbjct: 1210 ILGAREYIFSENIGILGDVAAGKEQTFGTLFSRTLAQ-IGGKLHYGHPDFLNGIFMTTRG 1268 Query: 206 GVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGE 385 GVSKA K ++++EDI+AG N+ LR G + H EY Q GKGRD+G I F K+ G GE Sbjct: 1269 GVSKAQKGLHVNEDIYAGMNAMLRGGRIKHCEYFQCGKGRDLGFGSILNFNTKVGTGMGE 1328 Query: 386 QTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL 517 Q LSR+ Y LG + R LS Y+ GF+ + M + +V +F+ Sbjct: 1329 QMLSREYYYLGTQLQLDRFLSFYFAHPGFHLNNMFIMLSVQLFM 1372
>BGS2_SCHPO (O13967) 1,3-beta-glucan synthase component bgs2 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) (Meiotic expression up-regulated protein 21) Length = 1894 Score = 131 bits (330), Expect = 1e-30 Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 5/181 (2%) Frame = +2 Query: 26 ILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRG 205 I+G RE+IF+ ++ L + +E +F T+ R +A + + HYGHPD + ++ TRG Sbjct: 1186 IMGAREYIFSENIGILGDVAAGKEQTFGTLFARTMAQ-IGGKLHYGHPDFLNAIYMTTRG 1244 Query: 206 GVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGE 385 GVSKA K ++++EDI+AG + R G + H EY Q GKGRD+G I F KI G GE Sbjct: 1245 GVSKAQKGLHVNEDIYAGMTALQRGGRIKHCEYYQCGKGRDLGFGSILNFTTKIGTGMGE 1304 Query: 386 QTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL-----YGRLYLVLSGL 550 Q +SR+ Y LG + F R LS YY GF+ + + + +V +F+ G +Y V++ Sbjct: 1305 QMVSREYYYLGTQLPFDRFLSFYYAHPGFHINNIFIMLSVQLFMVVLVNLGGMYHVVTVC 1364 Query: 551 D 553 D Sbjct: 1365 D 1365
>BGS3_SCHPO (Q9P377) 1,3-beta-glucan synthase component bgs3 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1826 Score = 131 bits (329), Expect = 2e-30 Identities = 69/169 (40%), Positives = 104/169 (61%), Gaps = 1/169 (0%) Frame = +2 Query: 14 RYPT-ILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLF 190 R+P +LG RE++F+ + L + +E +F T+ R LA + + HYGHPD + +F Sbjct: 1115 RHPVAMLGAREYVFSENSGILGDVAAGKEQTFGTLFSRSLAL-IGGKLHYGHPDFLNTIF 1173 Query: 191 HLTRGGVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIA 370 TRGGVSKA K ++++EDI+AG + R G + H +Y Q GKGRD+G I F KI Sbjct: 1174 MTTRGGVSKAQKGLHVNEDIYAGMTALQRGGRIKHCDYFQCGKGRDLGFGTIINFTTKIG 1233 Query: 371 YGNGEQTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL 517 G GEQ+LSR+ + LG + FFRMLS YY GF+ + + + ++ + + Sbjct: 1234 TGMGEQSLSREYFYLGTQLPFFRMLSFYYAHAGFHLNNVFIMISMQLLM 1282
>GLS2_YEAST (P40989) 1,3-beta-glucan synthase component GLS2 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1895 Score = 131 bits (329), Expect = 2e-30 Identities = 70/164 (42%), Positives = 98/164 (59%) Frame = +2 Query: 26 ILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRG 205 I+G RE+IF+ + L + +E +F T+ R LA + + HYGHPD + F TRG Sbjct: 1169 IVGAREYIFSENSGVLGDVAAGKEQTFGTLFARTLAQ-IGGKLHYGHPDFINATFMTTRG 1227 Query: 206 GVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGE 385 GVSKA K ++L+EDI+AG N+ LR G + H EY Q GKGRD+G I F KI G GE Sbjct: 1228 GVSKAQKGLHLNEDIYAGMNAVLRGGRIKHCEYYQCGKGRDLGFGTILNFTTKIGAGMGE 1287 Query: 386 QTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL 517 Q LSR+ Y LG + R L+ YY GF+ + + ++ +F+ Sbjct: 1288 QMLSREYYYLGTQLPIDRFLTFYYAHPGFHLNNLFIQLSLQMFM 1331
>GLS3_YEAST (Q04952) 1,3-beta-glucan synthase component FKS3 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1785 Score = 130 bits (326), Expect = 4e-30 Identities = 67/163 (41%), Positives = 99/163 (60%) Frame = +2 Query: 26 ILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRG 205 I+G RE+IF+ ++ L + +E +F T+ R LA + + HYGHPD + +F TRG Sbjct: 1063 IVGSREYIFSENIGVLGDIAAGKEQTFGTLFARTLAE-IGGKLHYGHPDFLNGIFMTTRG 1121 Query: 206 GVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGE 385 G+SKA + ++L+EDI+AG N+ R G + H +Y Q GKGRD+G I F KI G GE Sbjct: 1122 GLSKAQRGLHLNEDIYAGMNAICRGGKIKHSDYYQCGKGRDLGFGSILNFTTKIGAGMGE 1181 Query: 386 QTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVF 514 Q LSR+ Y LG + R LS +Y GF+ + + ++V +F Sbjct: 1182 QLLSREYYYLGTQLPMDRFLSFFYAHPGFHLNNLFISFSVQLF 1224
>GLS1_YEAST (P38631) 1,3-beta-glucan synthase component GLS1 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) (CND1 protein) (CWN53 protein) (FKS1 protein) (Papulacandin B sensitivity protein 1) Length = 1876 Score = 129 bits (324), Expect = 7e-30 Identities = 69/164 (42%), Positives = 98/164 (59%) Frame = +2 Query: 26 ILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRG 205 I+G RE+IF+ + L + +E +F T+ R L+ + + HYGHPD + F TRG Sbjct: 1150 IVGAREYIFSENSGVLGDVAAGKEQTFGTLFARTLSQ-IGGKLHYGHPDFINATFMTTRG 1208 Query: 206 GVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGE 385 GVSKA K ++L+EDI+AG N+ LR G + H EY Q GKGRD+G I F KI G GE Sbjct: 1209 GVSKAQKGLHLNEDIYAGMNAMLRGGRIKHCEYYQCGKGRDLGFGTILNFTTKIGAGMGE 1268 Query: 386 QTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL 517 Q LSR+ Y LG + R L+ YY GF+ + + ++ +F+ Sbjct: 1269 QMLSREYYYLGTQLPVDRFLTFYYAHPGFHLNNLFIQLSLQMFM 1312
>BGS1_SCHPO (Q10287) 1,3-beta-glucan synthase component bgs1 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1729 Score = 128 bits (322), Expect = 1e-29 Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 5/177 (2%) Frame = +2 Query: 26 ILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRG 205 ILG RE+IF+ + L + +E +F T+ R+L+ + + HYGHPD + LF +TRG Sbjct: 1028 ILGAREYIFSENTGMLGDVAAGKEQTFGTLFARILSL-IGGKLHYGHPDFINVLFMITRG 1086 Query: 206 GVSKASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGE 385 GVSKA K ++++EDI+AG + R G + H +Y Q GKGRD+G I F KI G E Sbjct: 1087 GVSKAQKGLHVNEDIYAGMIALQRGGRIKHCDYYQCGKGRDLGFGSILNFTTKIGTGMAE 1146 Query: 386 QTLSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL-----YGRLYLVL 541 Q LSR+ + LG + F R LS +Y GF+ + M+ ++++ + + G +Y V+ Sbjct: 1147 QMLSREYFNLGTQLPFDRFLSFFYAHAGFHVNNMVIMFSLQLLMLVIINLGAMYTVV 1203
>PTSP_BOMMO (P82003) Prothoracicostatic peptide precursor (Bom-PTSP)| Length = 274 Score = 34.7 bits (78), Expect = 0.23 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = +1 Query: 196 HKGWCKQSI*DYQS**GHICWIQFNTA*RKRYTS*IHASWQGKRCWSQSDFTI*GE---- 363 H GW K++ D S G W N+A KR ++++W GKR W + + G+ Sbjct: 49 HSGWAKRAWQDMSSAWGKRAWQDLNSAWGKRGWQDLNSAW-GKRAWQDLN-SAWGKRGWQ 106 Query: 364 --DSIW*RRTDSEP*HLPTW 417 +S W +R D E +W Sbjct: 107 DLNSAWGKRDDDEAMEKKSW 126
>Y733_TREPA (O83715) Hypothetical protein TP0733| Length = 219 Score = 31.2 bits (69), Expect = 2.5 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 9/66 (13%) Frame = +2 Query: 374 GNGEQTLSRDIYRLGHRFDFFRMLS--------CYYTT-IGFYFSTMITVWTVYVFLYGR 526 GNG+ L + LG+ + F + S CY TT +YFS ITV Y F GR Sbjct: 84 GNGK-LLGGGGFHLGYEYFFTKNFSLGGQVSFECYRTTGSNYYFSVPITVNPTYTFAVGR 142 Query: 527 LYLVLS 544 + LS Sbjct: 143 WRIPLS 148
>GLNE_CORGL (Q79VE2) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 1045 Score = 31.2 bits (69), Expect = 2.5 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Frame = +2 Query: 50 FTGSVSSLAWFMSNQETSFVT----IGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSK 217 + ++S L W S +E SFVT + +RVL N D+ DR L RGG+ Sbjct: 354 YVDALSPLIWTASQRE-SFVTDVQAMRRRVLDNVPE--------DLRDRELKLGRGGLRD 404 Query: 218 ASKIINLSEDIFAGFNSTLREGNVTHHEYMQVGK---GRDVGLNQISLFE 358 + L + + + TLR + + ++ V + GR+ G N I +E Sbjct: 405 VEFAVQLLQMVHGRIDETLRVRSTVNALHVLVDQGYVGREDGHNLIESYE 454
>NTRK3_PIG (P24786) NT-3 growth factor receptor precursor (EC 2.7.10.1)| (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase) (GP145-TrkC) (Trk-C) Length = 825 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +2 Query: 272 LREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSR 400 LRE +TH EY Q G+ + L LF Y NG TL+R Sbjct: 342 LRESKITHVEYYQEGEVSEGCL----LFNKPTHYNNGNYTLNR 380
>ATC3_YEAST (P39524) Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)| Length = 1355 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +2 Query: 404 IYRLGHRFDFFRMLSCYYTTI-GFYFSTMITVWTVYVFLYGRLYLVLSGLDEGLATGRKV 580 +Y+LG + FF + + I GF+ S ++ + T+ ++ YG + L + + G V Sbjct: 1079 LYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYGFALNMHGELADHWSWGVTV 1138 Query: 581 YT 586 YT Sbjct: 1139 YT 1140
>Y2734_MYCBO (P0A573) Hypothetical protein Mb2734| Length = 341 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 107 VTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASKII 232 VTI L + ++F Y P + DRL ++ GGV+K I+ Sbjct: 105 VTIVGHSLGGGVAMQFAYQFPQLVDRLILVSAGGVTKDVNIV 146
>Y2715_MYCTU (P0A572) Hypothetical protein Rv2715/MT2788| Length = 341 Score = 29.3 bits (64), Expect = 9.5 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 107 VTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASKII 232 VTI L + ++F Y P + DRL ++ GGV+K I+ Sbjct: 105 VTIVGHSLGGGVAMQFAYQFPQLVDRLILVSAGGVTKDVNIV 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,275,145 Number of Sequences: 219361 Number of extensions: 1815606 Number of successful extensions: 4223 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4219 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
