ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3g18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1142 bits (576), Expect = 0.0 Identities = 588/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120038 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 119980 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119979 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 119920 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119919 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 119860 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119859 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 119800 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119799 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 119740 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 119739 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 119680 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 119620 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119619 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 119560 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119559 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 119500 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 119449 Score = 1142 bits (576), Expect = 0.0 Identities = 588/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94856 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 94914 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94915 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 94974 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94975 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 95034 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95035 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 95094 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95095 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 95154 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 95155 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 95214 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95215 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 95274 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95275 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 95334 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95335 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 95394 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95395 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95445
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 891 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 890 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 831 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 771 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 711 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 651 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 650 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 591 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 531 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 471 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 411 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 360
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44863 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 44805 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 44804 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 44745 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44744 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 44685 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44684 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 44625 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44624 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 44565 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 44564 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 44505 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44504 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 44445 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44444 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 44385 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44384 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 44325 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44324 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 44274 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20255 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 20313 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 20314 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 20373 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20374 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 20433 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20434 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 20493 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20494 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 20553 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 20554 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 20613 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20614 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 20673 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20674 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 20733 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20734 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 20793 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20794 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 20844
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1492 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 1434 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1433 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 1374 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1373 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 1314 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1313 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 1254 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 1194 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1193 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 1134 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 1074 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 1014 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 954 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 903
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123702 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 123644 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 123643 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 123584 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123583 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 123524 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123523 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 123464 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123463 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 123404 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 123403 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 123344 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123343 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 123284 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123283 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 123224 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123223 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 123164 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123163 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 123113 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99135 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 99193 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 99194 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 99253 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99254 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 99313 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99314 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 99373 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99374 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 99433 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 99434 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 99493 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99494 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 99553 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99554 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 99613 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99614 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 99673 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99674 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 99724
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124419 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 124361 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 124360 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 124301 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124300 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 124241 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124240 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 124181 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124180 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 124121 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 124120 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 124061 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124060 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 124001 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124000 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 123941 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123940 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 123881 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123880 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 123830 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99812 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 99870 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 99871 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 99930 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99931 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 99990 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99991 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 100050 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100051 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 100110 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100111 gatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 100170 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100171 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 100230 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100231 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 100290 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100291 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 100350 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100351 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 100401
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118808 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 118749 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118748 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 118689 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118688 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 118629 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118628 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 118569 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118568 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 118509 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118508 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 118449 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118448 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 118389 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118388 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 118329 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118328 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 118269 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 118268 gaagaatgagccggcgactcataggcagtggcttggtta 118230
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119533 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119532 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119473 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119413 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119412 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119353 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 119352 gaagaatgagccggcgactcataggcagtggcttggtta 119314 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95623 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95683 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95743 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95744 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95803 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 95804 gaagaatgagccggcgactcataggcagtggcttggtta 95842
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119533 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119532 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119473 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119413 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119412 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119353 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 119352 gaagaatgagccggcgactcataggcagtggcttggtta 119314 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95623 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95683 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95743 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95744 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95803 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 95804 gaagaatgagccggcgactcataggcagtggcttggtta 95842
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119841 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119782 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119781 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119722 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119721 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119662 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119602 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119601 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119542 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119541 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119482 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119481 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119422 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119421 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119362 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119361 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119302 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 119301 gaagaatgagccggcgactcataggcagtggcttggtta 119263 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95209 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95268 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95269 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95328 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95329 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95388 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95389 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95448 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95449 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95508 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95509 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95568 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95569 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95628 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95629 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95688 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95689 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95748 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 95749 gaagaatgagccggcgactcataggcagtggcttggtta 95787
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507842 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31507901 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31507902 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31507961 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507962 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31508021 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508022 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31508081 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508082 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31508141 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31508142 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 31508201 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508202 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 31508261 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508262 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 31508321 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508322 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 31508381 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 31508382 gaagaatgagccggcgactcataggcagtggcttggtta 31508420
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84754 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84695 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84694 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 84635 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84634 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 84575 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84574 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 84515 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84514 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 84455 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84454 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 84395 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84394 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 84335 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84334 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 84275 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84274 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 84215 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 84214 gaagaatgagccggcgactcataggcagtggcttggtta 84176
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119861 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119802 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119801 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119742 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119741 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119682 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119681 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119622 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119621 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119562 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119561 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119502 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119501 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119442 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119441 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119382 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119381 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119322 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 119321 gaagaatgagccggcgactcataggcagtggcttggtta 119283 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95257 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95316 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95317 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95376 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95377 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95436 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95437 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95496 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95497 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95556 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95557 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95616 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95617 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95676 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95677 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95736 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95737 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95796 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 95797 gaagaatgagccggcgactcataggcagtggcttggtta 95835
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122306 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 122365 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122366 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 122425 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122426 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 122485 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122486 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 122545 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122546 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 122605 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122606 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 122665 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122666 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 122725 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122726 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 122785 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122786 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 122845 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 122846 gaagaatgagccggcgactcataggcagtggcttggtta 122884 Score = 1124 bits (567), Expect = 0.0 Identities = 576/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14031 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 14090 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14091 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 14150 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14151 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 14210 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14211 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 14270 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14271 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 14330 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14331 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 14390 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14391 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 14450 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14451 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 14510 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14511 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 14570 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 14571 gaagaatgagccggcgactcataggcagtggcttggtta 14609
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58580 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 58521 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58520 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 58461 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58460 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 58401 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58400 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 58341 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58340 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 58281 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58280 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 58221 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58220 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 58161 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58160 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 58101 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58100 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 58041 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 58040 gaagaatgagccggcgactcataggcagtggcttggtta 58002
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268191 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9268250 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268251 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9268310 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268311 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9268370 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268371 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9268430 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268431 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9268490 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268491 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9268550 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268551 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9268610 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268611 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9268670 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268671 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9268730 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9268731 gaagaatgagccggcgactcataggcagtggcttggtta 9268769 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227691 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9227750 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9227751 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9227810 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227811 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9227870 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227871 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9227930 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227931 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9227990 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9227991 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9228050 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228051 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9228110 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228111 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9228170 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228171 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9228230 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9228231 gaagaatgagccggcgactcataggcagtggcttggtta 9228269 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164280 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9164339 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164340 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9164399 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164400 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9164459 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164460 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9164519 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164520 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9164579 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164580 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9164639 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164640 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9164699 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164700 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9164759 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164760 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9164819 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9164820 gaagaatgagccggcgactcataggcagtggcttggtta 9164858 Score = 1124 bits (567), Expect = 0.0 Identities = 576/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056105 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9056164 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056165 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9056224 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056225 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9056284 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056285 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9056344 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056345 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9056404 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056405 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9056464 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056465 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9056524 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056525 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9056584 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056585 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9056644 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9056645 gaagaatgagccggcgactcataggcagtggcttggtta 9056683 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938176 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19938235 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938236 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19938295 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938296 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19938355 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938356 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19938415 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938416 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19938475 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938476 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 19938535 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938536 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 19938595 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938596 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 19938655 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938656 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 19938715 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19938716 gaagaatgagccggcgactcataggcagtggcttggtta 19938754 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277255 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10277196 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10277195 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10277136 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277135 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10277076 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277075 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10277016 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277015 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10276956 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10276955 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10276896 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276895 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10276836 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276835 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 10276776 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276775 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10276716 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10276715 gaagaatgagccggcgactcataggcagtggcttggtta 10276677 Score = 1124 bits (567), Expect = 0.0 Identities = 576/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387043 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10387102 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10387162 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10387222 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10387282 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10387342 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387343 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10387402 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387403 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10387462 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10387463 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 10387522 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387523 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10387582 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10387583 gaagaatgagccggcgactcataggcagtggcttggtta 10387621 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 439 agtaccgtgagggaaaggtgaaaagaacccc 469 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 264 ttgtgctgctaggcgaagcggttgagtgc 292 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598358 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31598417 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598418 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31598477 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598478 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31598537 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598538 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31598597 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598598 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31598657 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598658 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 31598717 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598718 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 31598777 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598778 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 31598837 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598838 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 31598897 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 31598898 gaagaatgagccggcgactcataggcagtggcttggtta 31598936
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525674 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 33525733 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33525734 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 33525793 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525794 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 33525853 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525854 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 33525913 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525914 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 33525973 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33525974 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 33526033 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526034 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 33526093 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526094 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 33526153 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526154 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 33526213 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 33526214 gaagaatgagccggcgactcataggcagtggcttggtta 33526252 Score = 281 bits (142), Expect = 1e-72 Identities = 148/150 (98%) Strand = Plus / Minus Query: 443 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 502 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 503 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 562 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 563 gccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggtta 16677952 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 457 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 516 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 517 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 566 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 450 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 488 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttc 47 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47867 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 47808 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47807 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 47748 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47747 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 47688 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47687 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 47628 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47627 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 47568 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47567 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 47508 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47507 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 47448 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47447 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 47388 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47387 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 47328 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 47327 gaagaatgagccggcgactcataggcagtggcttggtta 47289
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70871 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 70930 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 70931 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 70990 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70991 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 71050 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71051 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 71110 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71111 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 71170 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 71171 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 71230 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71231 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 71290 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71291 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 71350 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71351 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 71410 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 71411 gaagaatgagccggcgactcataggcagtggcttggtta 71449 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 342 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 343 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 402 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 462 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 522 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 582 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 583 gaagaatgagccggcgactcataggcagtggcttggtta 621
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 99 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 159 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 219 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 279 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 339 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 340 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 399 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 459 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 519 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 579 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 580 gaagaatgagccggcgactcataggcagtggcttggtta 618
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949452 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19949511 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949512 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19949571 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949572 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19949631 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949632 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19949691 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949692 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19949751 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949752 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 19949811 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949812 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 19949871 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949872 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 19949931 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949932 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 19949991 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19949992 gaagaatgagccggcgactcataggcagtggcttggtta 19950030 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283294 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10283235 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10283234 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10283175 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283174 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10283115 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283114 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10283055 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283054 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10282995 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10282994 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10282935 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282934 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10282875 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282874 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 10282815 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282814 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10282755 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10282754 gaagaatgagccggcgactcataggcagtggcttggtta 10282716 Score = 1124 bits (567), Expect = 0.0 Identities = 576/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393082 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10393141 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393142 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10393201 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393202 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10393261 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393262 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10393321 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393322 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10393381 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393382 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10393441 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393442 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10393501 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10393502 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 10393561 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393562 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 10393621 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10393622 gaagaatgagccggcgactcataggcagtggcttggtta 10393660 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 264 ttgtgctgctaggcgaagcggttgagtgc 292 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119835 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119776 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119775 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119716 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119656 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119596 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119595 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119536 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119535 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119476 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119475 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119416 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119356 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119355 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 119296 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 119295 gaagaatgagccggcgactcataggcagtggcttggtta 119257 Score = 1132 bits (571), Expect = 0.0 Identities = 577/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95204 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95263 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95264 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95323 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95324 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95383 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95443 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95503 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95504 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95563 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95564 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95623 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95683 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 95743 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 95744 gaagaatgagccggcgactcataggcagtggcttggtta 95782
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1124 bits (567), Expect = 0.0 Identities = 576/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140839 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 140898 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 140899 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 140958 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140959 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 141018 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141019 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 141078 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141079 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 141138 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141139 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 141198 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141199 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 141258 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141259 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 141318 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141319 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 141378 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 141379 gaagaatgagccggcgactcataggcagtggcttggtta 141417
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1124 bits (567), Expect = 0.0 Identities = 576/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93435 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 93494 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93495 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 93554 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93555 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 93614 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93615 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 93674 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93675 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 93734 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93735 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 93794 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93795 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 93854 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 93855 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 93914 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93915 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 93974 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 93975 gaagaatgagccggcgactcataggcagtggcttggtta 94013
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1124 bits (567), Expect = 0.0 Identities = 576/579 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27499 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 27558 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27559 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 27618 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27619 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 27678 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27679 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 27738 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27739 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 27798 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27799 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 27858 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27859 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 27918 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 27919 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 27978 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27979 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 28038 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||| Sbjct: 28039 gaagaatgagccggcgactcataggcagtggcttggtta 28077
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1116 bits (563), Expect = 0.0 Identities = 575/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242090 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9242031 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9242030 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9241971 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241970 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9241911 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241910 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9241851 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241850 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9241791 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9241790 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9241731 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241730 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9241671 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241670 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9241611 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241610 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 9241551 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241550 gaagaatgagctggcgactcataggcagtggcttggtta 9241512 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 146 actgaaacatcttagtagccagaggaaaagaaag 179 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1116 bits (563), Expect = 0.0 Identities = 575/579 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53303 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 53244 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 53243 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 53184 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53183 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 53124 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53123 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 53064 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53063 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 53004 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 53003 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 52944 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52943 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 52884 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52883 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 52824 Query: 494 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52823 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 52764 Query: 554 gaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 52763 gaagaatgagctggcgactcataggcagtggcttggtta 52725
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1114 bits (562), Expect = 0.0 Identities = 574/578 (99%) Strand = Plus / Plus Query: 15 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 75 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 134 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 135 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 195 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 255 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 314 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 315 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 374 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 375 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 435 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 495 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 554 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 555 aagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcataggcagtggcttggtta 578
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1072 bits (541), Expect = 0.0 Identities = 582/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaa 60 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123642 ggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaa 123584 Query: 61 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 120 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 123583 taagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccat 123524 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123523 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 123464 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123463 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 123404 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 300 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123403 gttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 123344 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||| Sbjct: 123343 agatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcat 123285 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123284 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 123225 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123224 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 123165 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123164 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 123105 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123104 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 123053 Score = 1072 bits (541), Expect = 0.0 Identities = 582/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaa 60 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99095 ggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaa 99153 Query: 61 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 120 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 99154 taagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccat 99213 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99214 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 99273 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99274 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 99333 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 300 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99334 gttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 99393 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||| Sbjct: 99394 agatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcat 99452 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99453 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 99512 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99513 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 99572 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99573 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 99632 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99633 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 99684
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1072 bits (541), Expect = 0.0 Identities = 582/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaa 60 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5448 ggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaa 5506 Query: 61 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 120 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 5507 taagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccat 5566 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5567 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 5626 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5627 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 5686 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 300 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5687 gttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 5746 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||| Sbjct: 5747 agatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcat 5805 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5806 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 5865 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5866 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 5925 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5926 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 5985 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5986 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 6037
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1072 bits (541), Expect = 0.0 Identities = 582/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaa 60 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 36 ggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaa 94 Query: 61 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 120 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 95 taagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccat 154 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 214 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 274 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 300 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 gttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 334 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||| Sbjct: 335 agatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcat 393 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 453 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 513 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 573 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 625
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Plus Query: 65 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 124 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 125 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 185 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 245 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 305 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 364 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 365 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 425 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 485 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 545 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 528
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1015 bits (512), Expect = 0.0 Identities = 521/524 (99%) Strand = Plus / Plus Query: 69 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 128 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 189 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 249 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 309 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 368 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 369 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 429 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 489 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 549 ctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggcttggtta 524
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 102 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 162 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 222 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 282 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 341 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 342 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 402 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 462 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 522 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 582 tggcttggtt 591 |||||||||| Sbjct: 481 tggcttggtt 490
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 955 bits (482), Expect = 0.0 Identities = 566/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139552 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 139494 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 139493 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 139435 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139434 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 139375 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139374 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 139315 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||| Sbjct: 139314 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcacccta 139255 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 139254 gatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagcatg 139195 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139194 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 139135 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 139134 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 139075 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 139074 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgac 139018 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139017 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 138967 Score = 955 bits (482), Expect = 0.0 Identities = 566/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110393 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 110451 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 110452 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 110510 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110511 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 110570 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110571 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 110630 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||| Sbjct: 110631 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcacccta 110690 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 110691 gatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagcatg 110750 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110751 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 110810 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 110811 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 110870 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 110871 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgac 110927 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110928 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 110978
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 955 bits (482), Expect = 0.0 Identities = 566/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127830 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 127772 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 127771 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 127713 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127712 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 127653 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127652 aaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 127593 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| Sbjct: 127592 ttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcacccta 127533 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 127532 gatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagcatg 127473 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127472 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 127413 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 127412 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 127353 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct: 127352 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatctctgac 127296 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127295 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 127245 Score = 955 bits (482), Expect = 0.0 Identities = 566/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107092 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 107150 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 107151 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 107209 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107210 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 107269 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107270 aaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 107329 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| Sbjct: 107330 ttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcacccta 107389 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 107390 gatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagcatg 107449 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107450 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 107509 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 107510 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 107569 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct: 107570 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatctctgac 107626 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107627 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 107677
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 955 bits (482), Expect = 0.0 Identities = 566/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134189 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 134131 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 134130 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 134072 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134071 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 134012 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134011 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 133952 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 133951 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcacccta 133892 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133891 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 133832 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133831 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 133772 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 133771 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 133712 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||| Sbjct: 133711 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgac 133655 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133654 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 133604 Score = 955 bits (482), Expect = 0.0 Identities = 566/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103782 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 103840 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 103841 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 103899 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103900 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 103959 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103960 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 104019 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 104020 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcacccta 104079 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104080 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 104139 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104140 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 104199 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 104200 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 104259 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||| Sbjct: 104260 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgac 104316 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104317 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 104367
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 940 bits (474), Expect = 0.0 Identities = 564/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142074 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 142016 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 142015 aagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatg 141957 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141956 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 141897 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141896 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 141837 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 141836 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcacccta 141777 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 141776 gatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatg 141717 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 141716 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgg 141657 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 141656 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 141597 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 141596 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgac 141540 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141539 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 141489 Score = 940 bits (474), Expect = 0.0 Identities = 564/591 (95%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111583 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 111641 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 111642 aagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatg 111700 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111701 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 111760 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111761 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 111820 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 111821 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcacccta 111880 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||| |||||||||||||| ||||| |||||||||||||||||||| Sbjct: 111881 gatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatg 111940 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111941 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgg 112000 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 112001 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 112060 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 112061 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgac 112117 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112118 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 112168
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 930 bits (469), Expect = 0.0 Identities = 563/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134947 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 134889 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 134888 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 134830 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134829 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 134770 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134769 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 134710 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||| Sbjct: 134709 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacccta 134650 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||| Sbjct: 134649 gatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagcatg 134590 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134589 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 134530 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 134529 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 134470 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 134469 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgac 134417 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134416 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Score = 930 bits (469), Expect = 0.0 Identities = 563/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105335 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 105393 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 105394 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 105452 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105453 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 105512 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105513 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 105572 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||| Sbjct: 105573 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacccta 105632 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||| Sbjct: 105633 gatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagcatg 105692 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105693 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 105752 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 105753 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 105812 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 105813 aaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgac 105865 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105866 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 926 bits (467), Expect = 0.0 Identities = 563/591 (95%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 136557 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 136499 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 136498 aagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 136440 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136439 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 136380 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136379 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 136320 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 136319 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacccta 136260 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 136259 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 136200 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136199 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 136140 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 136139 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 136080 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | || | ||||||| Sbjct: 136079 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgac 136025 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136024 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135974 Score = 926 bits (467), Expect = 0.0 Identities = 563/591 (95%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105868 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 105926 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 105927 aagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 105985 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105986 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 106045 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106046 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 106105 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 106106 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacccta 106165 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106166 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 106225 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 106285 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 106286 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 106345 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | || | ||||||| Sbjct: 106346 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgac 106400 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106401 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106451
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 922 bits (465), Expect = 0.0 Identities = 471/473 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 103 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 163 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 223 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 283 Query: 254 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 343 Query: 314 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 344 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 403 Query: 374 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 463 Query: 434 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 908 bits (458), Expect = 0.0 Identities = 561/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132741 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 132683 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| Sbjct: 132682 aagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatg 132624 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132623 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 132564 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132563 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 132504 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 132503 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacccta 132444 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132443 gatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 132384 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132383 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 132324 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 132323 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 132264 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 132263 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgac 132208 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 132157 Score = 908 bits (458), Expect = 0.0 Identities = 561/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104137 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 104195 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| Sbjct: 104196 aagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatg 104254 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104255 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 104314 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104315 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 104374 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 104375 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacccta 104434 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104435 gatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 104494 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104495 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 104554 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 104555 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 104614 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 104615 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgac 104670 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104671 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 104721
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 908 bits (458), Expect = 0.0 Identities = 561/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132964 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 132906 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| Sbjct: 132905 aagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatg 132847 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132846 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 132787 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132786 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 132727 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 132726 ttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacccta 132667 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132666 gatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 132607 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132606 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 132547 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 132546 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 132487 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | || ||||||| Sbjct: 132486 aaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgac 132431 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132430 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 132380 Score = 908 bits (458), Expect = 0.0 Identities = 561/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103800 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 103858 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| Sbjct: 103859 aagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatg 103917 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103918 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 103977 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103978 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 104037 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 104038 ttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacccta 104097 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104098 gatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 104157 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104158 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 104217 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 104218 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 104277 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | || ||||||| Sbjct: 104278 aaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgac 104333 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104334 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 104384
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 908 bits (458), Expect = 0.0 Identities = 561/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132734 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 132676 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| Sbjct: 132675 aagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatg 132617 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132616 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 132557 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132556 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 132497 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 132496 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacccta 132437 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132436 gatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 132377 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132376 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 132317 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 132316 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 132257 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 132256 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgac 132201 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132200 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 132150 Score = 908 bits (458), Expect = 0.0 Identities = 561/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104135 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 104193 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| Sbjct: 104194 aagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatg 104252 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104253 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 104312 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104313 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 104372 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 104373 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacccta 104432 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104433 gatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 104492 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104493 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 104552 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 104553 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 104612 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 104613 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgac 104668 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104669 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 104719
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 900 bits (454), Expect = 0.0 Identities = 560/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131633 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 131575 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| Sbjct: 131574 aagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatg 131516 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131515 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 131456 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131455 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 131396 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 131395 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacccta 131336 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131335 gatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 131276 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131275 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 131216 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 131215 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 131156 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 131155 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgac 131100 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131099 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 131049 Score = 900 bits (454), Expect = 0.0 Identities = 560/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103002 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 103060 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| Sbjct: 103061 aagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatg 103119 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103120 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 103179 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103180 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 103239 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||| Sbjct: 103240 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacccta 103299 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103300 gatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 103359 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103360 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 103419 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 103420 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 103479 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 103480 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgac 103535 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103536 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 103586
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 900 bits (454), Expect = 0.0 Identities = 560/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133925 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 133867 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| Sbjct: 133866 aagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatg 133808 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133807 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 133748 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133747 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 133688 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 133687 ttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacccta 133628 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133627 gatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 133568 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133567 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 133508 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 133507 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 133448 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | || ||||||| Sbjct: 133447 aaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgac 133392 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133391 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 133341 Score = 900 bits (454), Expect = 0.0 Identities = 560/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104724 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 104782 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| Sbjct: 104783 aagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatg 104841 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104842 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 104901 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104902 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 104961 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 104962 ttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacccta 105021 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105022 gatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 105081 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105082 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 105141 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 105142 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 105201 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | || ||||||| Sbjct: 105202 aaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgac 105257 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105258 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105308
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 892 bits (450), Expect = 0.0 Identities = 559/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 140326 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 140268 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 140267 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 140209 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140208 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 140149 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140148 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 140089 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||| Sbjct: 140088 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcacccta 140029 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 140028 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 139969 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139968 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 139909 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 139908 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 139849 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | || ||||||||||||||||| | | | | ||||||| Sbjct: 139848 aaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgac 139793 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139792 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 139742 Score = 892 bits (450), Expect = 0.0 Identities = 559/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 109734 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 109792 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 109793 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 109851 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109852 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 109911 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109912 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 109971 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||| Sbjct: 109972 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcacccta 110031 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110032 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 110091 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110092 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 110151 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 110152 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 110211 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | || ||||||||||||||||| | | | | ||||||| Sbjct: 110212 aaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgac 110267 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110268 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 110318
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 892 bits (450), Expect = 0.0 Identities = 559/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 33 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 91 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| Sbjct: 92 aagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatg 150 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 210 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 270 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 271 ttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacccta 330 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 331 gatggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagtagcatg 390 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 450 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 451 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 510 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | || ||||||| Sbjct: 511 aaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgac 566 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 617
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 892 bits (450), Expect = 0.0 Identities = 559/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 101 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 340 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 460 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 519 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 520 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgac 575 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 626
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 136266 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 136208 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 136207 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 136149 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136148 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 136089 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136088 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 136029 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 136028 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccct 135969 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135968 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 135909 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135908 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135849 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135848 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135789 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135788 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 135734 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135733 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135682 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 106364 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 106422 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 106423 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 106481 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106482 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 106541 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106542 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 106601 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 106602 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccct 106661 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106662 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 106721 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106722 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 106781 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 106782 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106841 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106842 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106896 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106897 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106948
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 136904 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 136846 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 136845 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 136787 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136786 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 136727 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136726 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 136667 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 136666 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 136607 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 136606 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 136547 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136546 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 136487 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 136486 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 136427 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 136426 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 136372 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136371 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 136320 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 106653 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 106711 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 106712 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 106770 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106771 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 106830 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106831 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 106890 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 106891 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 106950 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106951 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 107010 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107011 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 107070 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 107071 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 107130 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 107131 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 107185 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107186 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 107237
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 1558 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 1616 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 1617 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 1675 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1676 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 1735 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1736 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 1795 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 1796 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccct 1855 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1856 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 1915 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1916 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 1975 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 1976 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 2035 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 2036 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 2090 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2091 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 2142
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 135512 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 135454 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 135453 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 135395 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135394 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135335 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135334 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135275 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 135274 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 135215 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135214 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 135155 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135154 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135095 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135094 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135035 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135034 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 134980 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134979 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134928 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 105524 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 105582 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 105583 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 105641 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105642 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 105701 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105702 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 105761 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 105762 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 105821 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105822 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 105881 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105882 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 105941 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 105942 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106001 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106002 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106056 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106057 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106108
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 135647 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 135589 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 135588 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 135530 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135529 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135470 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135469 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135410 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 135409 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 135350 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135349 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 135290 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135289 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135230 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135229 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135170 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135169 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 135115 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135114 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135063 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 105696 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 105754 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 105755 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 105813 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105814 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 105873 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105874 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 105933 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 105934 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 105993 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105994 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 106053 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106054 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 106113 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 106114 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106173 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106174 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106228 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106229 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106280
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 135645 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 135587 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 135586 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 135528 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135527 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135468 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135467 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135408 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 135407 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 135348 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135347 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 135288 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135287 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135228 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135227 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135168 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135167 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 135113 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135112 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135061 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 105693 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 105751 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 105752 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 105810 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105811 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 105870 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105871 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 105930 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 105931 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 105990 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105991 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 106050 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 106110 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 106111 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106170 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106171 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106225 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106277
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 135557 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 135499 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 135498 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 135440 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135439 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135380 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135379 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135320 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 135319 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 135260 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135259 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 135200 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135199 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135140 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135139 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135080 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135079 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 135025 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135024 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134973 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 105571 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 105629 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 105630 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 105688 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105689 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 105748 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105749 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 105808 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 105809 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 105868 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105869 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 105928 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105929 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 105988 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 105989 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106048 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106049 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106103 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106104 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106155
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 136264 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 136206 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 136205 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 136147 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136146 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 136087 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136086 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 136027 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 136026 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccct 135967 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135966 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 135907 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135906 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135847 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135846 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135787 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135786 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 135732 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135731 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135680 Score = 880 bits (444), Expect = 0.0 Identities = 559/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 106362 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 106420 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 106421 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 106479 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 106539 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106540 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 106599 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 106600 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccct 106659 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106660 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 106719 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106720 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 106779 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 106780 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106839 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106840 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106894 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106895 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106946
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 876 bits (442), Expect = 0.0 Identities = 557/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 106039 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaat 106097 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 106098 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 106156 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106157 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 106216 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106217 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 106276 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 106277 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacccta 106336 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106337 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 106396 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 106456 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 106457 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 106516 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||| Sbjct: 106517 aaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgac 106572 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106573 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106623 Score = 827 bits (417), Expect = 0.0 Identities = 556/594 (93%), Gaps = 9/594 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 135870 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaat 135812 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 135811 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 135753 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135752 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135693 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135692 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135633 Query: 242 ttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 300 |||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||||||| Sbjct: 135632 ttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccct 135573 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgacccgagtagca 359 ||||||| | |||||||||||||||||||||||||||||| | | ||||||||||||||| Sbjct: 135572 agatggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagtagca 135513 Query: 360 tggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcc 418 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135512 tggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcc 135453 Query: 419 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 478 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 135452 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 135393 Query: 479 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 538 |||||||||||| |||||||| | |||| ||||||||||||||| | | | | |||| Sbjct: 135392 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactct 135337 Query: 539 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135336 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135283
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 876 bits (442), Expect = 0.0 Identities = 557/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 136146 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaat 136088 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 136087 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 136029 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136028 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135969 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135968 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135909 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 135908 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacccta 135849 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135848 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 135789 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135788 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 135729 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 135728 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 135669 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||| Sbjct: 135668 aaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgac 135613 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135612 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135562 Score = 876 bits (442), Expect = 0.0 Identities = 557/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 106261 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaat 106319 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 106320 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 106378 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106379 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 106438 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106439 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 106498 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 106499 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacccta 106558 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106559 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 106618 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106619 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 106678 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 106679 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 106738 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||| Sbjct: 106739 aaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgac 106794 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106795 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106845
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 872 bits (440), Expect = 0.0 Identities = 558/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 135995 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 135937 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 135936 aagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 135878 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135877 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135818 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135817 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135758 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 135757 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccct 135698 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135697 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 135638 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135637 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135578 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135577 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135518 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135517 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 135463 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135462 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135411 Score = 872 bits (440), Expect = 0.0 Identities = 558/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 106143 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 106201 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||| ||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 106202 aagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 106260 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106261 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 106320 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106321 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 106380 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 106381 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccct 106440 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106441 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 106500 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106501 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 106560 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 106561 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106620 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106621 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106675 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106676 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106727
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 872 bits (440), Expect = 0.0 Identities = 558/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 135524 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 135466 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 135465 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 135407 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135406 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 135347 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135346 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 135287 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 135286 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 135227 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135226 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 135167 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135166 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 135107 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135106 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135047 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 135046 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 134992 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134991 ccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggtta 134940 Score = 872 bits (440), Expect = 0.0 Identities = 558/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 105538 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 105596 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 105597 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 105655 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105656 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 105715 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105716 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 105775 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||| Sbjct: 105776 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccct 105835 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105836 agatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 105895 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105896 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 105955 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 105956 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 106015 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 106016 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 106070 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106071 ccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggtta 106122
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 870 bits (439), Expect = 0.0 Identities = 558/592 (94%), Gaps = 7/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 34 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 92 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 93 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 151 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 152 ggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaaagaaagca 211 Query: 182 aaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 212 aaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 271 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 300 |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| Sbjct: 272 gttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccct 331 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 332 agatggctagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 391 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 451 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 452 ggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggggagt 511 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | | | |||||| Sbjct: 512 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-gggctctga 567 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 619
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 860 bits (434), Expect = 0.0 Identities = 555/591 (93%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 131757 ggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaat 131699 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||| |||||||||||||||| ||||||||||||||| |||| | ||||||||||||| Sbjct: 131698 aagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatccatg 131640 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131639 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 131580 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131579 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 131520 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||| Sbjct: 131519 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaacccta 131460 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131459 gatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 131400 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131399 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 131340 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 131339 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 131280 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | ||||| |||||||||||||||| | || | ||||| Sbjct: 131279 aaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgac 131224 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131223 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 131173 Score = 860 bits (434), Expect = 0.0 Identities = 555/591 (93%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 101688 ggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaat 101746 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||| |||||||||||||||| ||||||||||||||| |||| | ||||||||||||| Sbjct: 101747 aagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatccatg 101805 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101806 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 101865 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101866 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 101925 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||| Sbjct: 101926 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaacccta 101985 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101986 gatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 102045 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102046 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 102105 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 102106 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 102165 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | ||||| |||||||||||||||| | || | ||||| Sbjct: 102166 aaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgac 102221 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102222 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 102272
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 860 bits (434), Expect = 0.0 Identities = 554/591 (93%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 35 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 93 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||| ||| |||||||| |||||| |||||||| ||| Sbjct: 94 aagcatagatccggagattcccgaatgggttaaccttttgaactgc-tgctgaattcata 152 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 212 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 213 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 272 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| | Sbjct: 273 ttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcacccca 332 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 333 gatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtagcatg 392 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 452 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 453 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 512 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 513 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgac 569 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 570 cgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 856 bits (432), Expect = 0.0 Identities = 556/592 (93%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 139470 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 139412 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 139411 aagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 139353 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139352 ggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagca 139293 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139292 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 139233 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||| Sbjct: 139232 ttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacccta 139173 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 139172 gatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 139113 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139112 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 139053 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| Sbjct: 139052 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtg 138993 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctga 540 ||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 138992 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctga 138938 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138937 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 138886 Score = 856 bits (432), Expect = 0.0 Identities = 556/592 (93%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 109627 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 109685 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 109686 aagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 109744 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 109745 ggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagca 109804 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109805 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 109864 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||| Sbjct: 109865 ttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacccta 109924 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 109925 gatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 109984 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109985 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 110044 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| Sbjct: 110045 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtg 110104 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctga 540 ||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 110105 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctga 110159 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110160 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 110211
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 856 bits (432), Expect = 0.0 Identities = 557/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 9 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 67 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 68 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 126 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 186 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 246 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||||| Sbjct: 247 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc- 305 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 306 atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 365 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 426 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 485 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 486 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 540 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 852 bits (430), Expect = 0.0 Identities = 557/594 (93%), Gaps = 8/594 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 139679 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 139621 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 139620 aagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 139562 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139561 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 139502 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139501 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 139442 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||||| Sbjct: 139441 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccct 139382 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 139381 agatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 139322 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139321 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 139262 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 139261 ggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 139202 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctct 538 |||||||||| |||||||| | |||||||||||||||||||| || | | |||| Sbjct: 139201 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggactct 139145 Query: 539 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139144 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 139091 Score = 852 bits (430), Expect = 0.0 Identities = 557/594 (93%), Gaps = 8/594 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 109620 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 109678 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 109679 aagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 109737 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109738 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 109797 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109798 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 109857 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccct 300 ||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||||| Sbjct: 109858 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccct 109917 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 109918 agatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 109977 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109978 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 110037 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 110038 ggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 110097 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctct 538 |||||||||| |||||||| | |||||||||||||||||||| || | | |||| Sbjct: 110098 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggactct 110154 Query: 539 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110155 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 110208
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 833 bits (420), Expect = 0.0 Identities = 553/592 (93%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 142845 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 142787 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| |||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 142786 aagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatg 142728 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142727 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 142668 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142667 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 142608 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccct 300 ||||||||||| |||||||||| ||||||||||||||||| | || ||||| ||||||| Sbjct: 142607 ttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccct 142548 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 142547 agatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 142488 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142487 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 142428 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 142427 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 142368 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | ||||||||||||||||||| | || | |||||| Sbjct: 142367 gaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctga 142313 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142312 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 142261 Score = 833 bits (420), Expect = 0.0 Identities = 553/592 (93%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110483 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 110541 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| |||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| Sbjct: 110542 aagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatg 110600 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110601 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 110660 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110661 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 110720 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccct 300 ||||||||||| |||||||||| ||||||||||||||||| | || ||||| ||||||| Sbjct: 110721 ttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccct 110780 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 110781 agatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 110840 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110841 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 110900 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 110901 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 110960 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | ||||||||||||||||||| | || | |||||| Sbjct: 110961 gaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctga 111015 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111016 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 111067
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 831 bits (419), Expect = 0.0 Identities = 551/591 (93%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4265 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 4323 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| || | Sbjct: 4324 aagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacg 4382 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4383 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 4442 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4443 aaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacgggg 4502 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||| ||||||||||||| | || || |||||||| Sbjct: 4503 ttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcacccta 4562 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4563 gatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 4622 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4623 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 4682 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 4683 gtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtg 4742 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 4743 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgac 4797 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4798 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4848
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 831 bits (419), Expect = 0.0 Identities = 551/591 (93%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 23660 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 23602 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| || | Sbjct: 23601 aagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacg 23543 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23542 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 23483 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 23482 aaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacgggg 23423 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||| ||||||||||||| | || || |||||||| Sbjct: 23422 ttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcacccta 23363 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23362 gatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 23303 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23302 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 23243 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 23242 gtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtg 23183 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| | | | ||||||| Sbjct: 23182 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgac 23128 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23127 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 23077
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 831 bits (419), Expect = 0.0 Identities = 552/591 (93%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4534 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 4592 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| || | Sbjct: 4593 aagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacg 4651 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4652 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 4711 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4712 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 4771 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || || |||||||| Sbjct: 4772 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcacccta 4831 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4832 gatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatg 4891 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4892 gggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 4951 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 4952 gtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtg 5011 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | ||||||||| |||||||||| | | | ||||||| Sbjct: 5012 aaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgac 5065 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5066 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 5116
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 831 bits (419), Expect = 0.0 Identities = 552/591 (93%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4534 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 4592 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| || | Sbjct: 4593 aagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacg 4651 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4652 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 4711 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4712 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 4771 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||| || || || |||||||| Sbjct: 4772 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcacccta 4831 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4832 gatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatg 4891 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4892 gggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 4951 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 4952 gtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtg 5011 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | ||||||||| |||||||||| | | | ||||||| Sbjct: 5012 aaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgac 5065 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5066 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 5116
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 57 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 116 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 117 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 177 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 237 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 297 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 356 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 357 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 417 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 477 tagtga 482 |||||| Sbjct: 421 tagtga 426
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 827 bits (417), Expect = 0.0 Identities = 552/593 (93%), Gaps = 7/593 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 86296 ggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaat 86354 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||| ||||||| |||| ||| |||||| ||||||||||||| Sbjct: 86355 gagcatagatccggagattcccgaataggttaacccttttaactgc-tgctgaatccatg 86413 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86414 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaatagaaagca 86473 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86474 aaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 86533 Query: 242 ttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 299 |||||||||||| |||| |||| |||||||||||||||||||||||||| | |||||| Sbjct: 86534 ttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgcaccc 86593 Query: 300 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 359 ||||||| | |||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 86594 tagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagtagca 86653 Query: 360 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86654 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 86713 Query: 420 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 86714 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggag 86773 Query: 480 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 539 ||||||||||| |||||||| | |||||||||||||||||||| || |||||||| Sbjct: 86774 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatctctg 86830 Query: 540 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86831 accgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 86883
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 827 bits (417), Expect = 0.0 Identities = 552/593 (93%), Gaps = 7/593 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 88382 ggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaat 88440 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| Sbjct: 88441 tagcatagatccggagattcccgaataggttaacctttttcactgc-tgctgaatccatg 88499 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 88500 ggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaatagaaagca 88559 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88560 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 88619 Query: 242 ttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 299 ||||||||||||| ||| |||| |||||||||||||||||||||||||| | |||||| Sbjct: 88620 ttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgcaccc 88679 Query: 300 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 359 ||||||| | |||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 88680 tagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagtagca 88739 Query: 360 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88740 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 88799 Query: 420 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 88800 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggag 88859 Query: 480 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 539 ||||||||||| |||||||| | |||||||||||||||||||| || |||||||| Sbjct: 88860 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatctctg 88916 Query: 540 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 88917 accgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 88969
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 821 bits (414), Expect = 0.0 Identities = 556/594 (93%), Gaps = 11/594 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || | |||||||||||||||||||||||||| Sbjct: 1801 ggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcggggagttgaaaat 1858 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 1859 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 1917 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1918 ggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaaagaaagca 1977 Query: 182 aaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1978 aaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 2037 Query: 241 gttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggttgagtgccgcacc 298 |||||||||||||||||||||| | ||||||||||||||||| | || ||| ||||| Sbjct: 2038 gttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgcacc 2097 Query: 299 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 358 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2098 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 2157 Query: 359 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2158 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 2217 Query: 419 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 478 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 2218 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 2277 Query: 479 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 538 |||||||||||| |||||||| | |||||||||||||||||||| | || | |||| Sbjct: 2278 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctct 2332 Query: 539 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2333 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 2386
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 821 bits (414), Expect = 0.0 Identities = 417/418 (99%) Strand = Plus / Plus Query: 175 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 235 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 295 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 354 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 355 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 415 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 475 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 418
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 821 bits (414), Expect = 0.0 Identities = 498/523 (95%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 130501 ggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaat 130443 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||| Sbjct: 130442 aagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatccatg 130384 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130383 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 130324 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130323 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 130264 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 130263 ttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcacccta 130204 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130203 gatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 130144 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130143 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 130084 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 130083 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 130024 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130023 aaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 821 bits (414), Expect = 0.0 Identities = 498/523 (95%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 101955 ggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaat 102013 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||| Sbjct: 102014 aagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatccatg 102072 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102073 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 102132 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102133 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 102192 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 102193 ttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcacccta 102252 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102253 gatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 102312 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102313 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 102372 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 102373 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 102432 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102433 aaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 107 bits (54), Expect = 4e-20 Identities = 57/58 (98%) Strand = Plus / Minus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggtta 129912 Score = 107 bits (54), Expect = 4e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggtta 102544
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 819 bits (413), Expect = 0.0 Identities = 551/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 530 ggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaat 588 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| |||||||||||||||| |||||| |||||||| |||| | ||||||||||||| Sbjct: 589 aagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatg 647 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 707 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 767 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||| Sbjct: 768 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacccta 827 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 828 gatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 887 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 947 Query: 422 gtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||| || ||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 948 gtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagt 1007 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | ||||| |||||||||||||| || || |||||| Sbjct: 1008 gaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctctga 1061 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1062 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 1113
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 817 bits (412), Expect = 0.0 Identities = 415/416 (99%) Strand = Plus / Plus Query: 177 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 237 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 297 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 356 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 357 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 417 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 477 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 416
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 817 bits (412), Expect = 0.0 Identities = 415/416 (99%) Strand = Plus / Plus Query: 177 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 237 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 297 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 356 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 357 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 417 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 477 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 416
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 815 bits (411), Expect = 0.0 Identities = 414/415 (99%) Strand = Plus / Plus Query: 178 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 238 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 298 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 357 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 358 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 418 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 478 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 415
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 815 bits (411), Expect = 0.0 Identities = 414/415 (99%) Strand = Plus / Plus Query: 178 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 238 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 298 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 357 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 358 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 418 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 478 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 418
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 813 bits (410), Expect = 0.0 Identities = 497/523 (95%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 101 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 340 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 460 gtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcggggagtg 519 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 520 aaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 813 bits (410), Expect = 0.0 Identities = 497/523 (95%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 101 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 340 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||| ||||||||||||| ||||||||||||||||| || |||| Sbjct: 460 gtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccgggagtg 519 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||||||| |||||||| | |||||||||||||||||||| Sbjct: 520 aaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggtta 638
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 811 bits (409), Expect = 0.0 Identities = 412/413 (99%) Strand = Plus / Plus Query: 180 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 240 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 300 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 360 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 420 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 480 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 540 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 413
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 807 bits (407), Expect = 0.0 Identities = 554/595 (93%), Gaps = 10/595 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131837 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 131779 Query: 62 aagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccat 120 |||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 131778 aagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccac 131720 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131719 gggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagc 131660 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131659 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 131600 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacc 298 ||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| ||||| Sbjct: 131599 gttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacc 131540 Query: 299 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 358 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131539 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 131480 Query: 359 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131479 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 131420 Query: 419 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 478 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 131419 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 131360 Query: 479 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctc 537 |||||||||||| |||||||| | |||||||||||||||||||| || | || ||| Sbjct: 131359 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctc 131304 Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131303 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 131249 Score = 807 bits (407), Expect = 0.0 Identities = 554/595 (93%), Gaps = 10/595 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103557 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 103615 Query: 62 aagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccat 120 |||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 103616 aagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccac 103674 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 103675 gggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagc 103734 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103735 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 103794 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacc 298 ||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| ||||| Sbjct: 103795 gttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacc 103854 Query: 299 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 358 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103855 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 103914 Query: 359 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103915 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 103974 Query: 419 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 478 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 103975 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 104034 Query: 479 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctc 537 |||||||||||| |||||||| | |||||||||||||||||||| || | || ||| Sbjct: 104035 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctc 104090 Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104091 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 104145
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 807 bits (407), Expect = 0.0 Identities = 553/593 (93%), Gaps = 13/593 (2%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 134 ggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaat 192 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| Sbjct: 193 aagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatg 251 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaaaagaaagc 180 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 252 ggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaaaagaaagc 311 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 371 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccc 299 ||||||||||||||||||||||| |||||||||||||||| || || ||| |||||| Sbjct: 372 -ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccc 430 Query: 300 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 359 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 tagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 490 Query: 360 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 419 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 491 tggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcct 550 Query: 420 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 479 |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || Sbjct: 551 gggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggag 609 Query: 480 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 539 ||||||||||| |||||||| | |||||||||||||||||||| | | ||||| Sbjct: 610 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca----gggctctg 662 Query: 540 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 715
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 805 bits (406), Expect = 0.0 Identities = 496/523 (94%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| |||||||||| || |||||||||||||||||||||||||||| Sbjct: 46286 ggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcggggagttgaaaat 46344 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 46345 aagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 46403 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 46404 ggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagca 46463 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 46464 aaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacgggg 46523 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| Sbjct: 46524 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcacccta 46583 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46584 gatggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 46643 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46644 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 46703 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 46704 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 46763 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46764 aaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 115 bits (58), Expect = 2e-22 Identities = 58/58 (100%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 46875
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 805 bits (406), Expect = 0.0 Identities = 496/523 (94%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 101 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 340 gatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||| ||||||||||||| ||||||||||||||||| || |||| Sbjct: 460 gtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccgggagtg 519 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||||||| |||||||| | |||||||||||||||||||| Sbjct: 520 aaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 60.0 bits (30), Expect = 9e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||| ||||||||||||||| ||||| || |||| ||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggcttggtta 637
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 805 bits (406), Expect = 0.0 Identities = 496/523 (94%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 101 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 340 gatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 460 gtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtg 519 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 520 aaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 67.9 bits (34), Expect = 4e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggtta 637
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 805 bits (406), Expect = 0.0 Identities = 496/523 (94%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggggttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 101 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 340 gatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 460 gtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtg 519 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||||||||| |||||||| | |||||||||||||||||||| Sbjct: 520 aaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 83.8 bits (42), Expect = 6e-13 Identities = 55/58 (94%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggtta 637
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 801 bits (404), Expect = 0.0 Identities = 547/591 (92%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| |||||||||||||||| |||||| |||||||| |||| | ||||||||||||| Sbjct: 101 aagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 340 gatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 460 gtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtg 519 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||| ||| |||||||| | ||||| |||||||||||||| || || |||||| Sbjct: 520 aaataaaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctctgaa 573 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 574 cgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggtta 624
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 791 bits (399), Expect = 0.0 Identities = 525/562 (93%), Gaps = 8/562 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 83 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 141 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 142 aagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatg 200 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 201 ggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagca 260 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 320 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||| Sbjct: 321 ttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacccta 380 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 381 gatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 440 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 500 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| Sbjct: 501 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtg 560 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctga 540 ||||||||| |||||||| | ||||||||||||| |||||| | || | |||||| Sbjct: 561 aaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg--ctctga 615 Query: 541 ccgcgtgcctgttgaagaatga 562 |||||||||||||||||||||| Sbjct: 616 ccgcgtgcctgttgaagaatga 637
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 785 bits (396), Expect = 0.0 Identities = 547/592 (92%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||| |||| || |||||||||||||||||||||||||||| Sbjct: 52652 ggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaat 52594 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||| Sbjct: 52593 aagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatg 52535 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52534 ggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 52475 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52474 aaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacgggg 52415 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccct 300 |||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||| Sbjct: 52414 ttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccct 52355 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 52354 agatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcat 52295 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52294 gggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 52235 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 52234 ggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagt 52175 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 52174 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 52120 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52119 ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 52068 Score = 785 bits (396), Expect = 0.0 Identities = 547/592 (92%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||| |||| || |||||||||||||||||||||||||||| Sbjct: 37176 ggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaat 37234 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||| Sbjct: 37235 aagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatg 37293 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37294 ggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 37353 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37354 aaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacgggg 37413 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccct 300 |||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||| Sbjct: 37414 ttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccct 37473 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 37474 agatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcat 37533 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37534 gggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 37593 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 37594 ggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagt 37653 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 37654 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 37708 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37709 ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 37760
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 785 bits (396), Expect = 0.0 Identities = 539/585 (92%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 128401 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 128342 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 128341 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 128283 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 128282 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 128223 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128222 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 128163 Query: 254 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 307 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 128162 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 128103 Query: 308 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 367 | |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| Sbjct: 128102 aagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcac 128043 Query: 368 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128042 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 127983 Query: 428 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 487 |||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 127982 gatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatag 127923 Query: 488 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 547 ||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| || Sbjct: 127922 aacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatg 127866 Query: 548 cctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 127865 cctgttgaggaatgagccggcgactcataggcagtggcctggtta 127821 Score = 785 bits (396), Expect = 0.0 Identities = 539/585 (92%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 95046 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 95105 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 95106 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 95164 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 95165 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 95224 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95225 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 95284 Query: 254 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 307 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95285 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 95344 Query: 308 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 367 | |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| Sbjct: 95345 aagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcac 95404 Query: 368 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 95464 Query: 428 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 487 |||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 95465 gatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatag 95524 Query: 488 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 547 ||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| || Sbjct: 95525 aacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatg 95581 Query: 548 cctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 95582 cctgttgaggaatgagccggcgactcataggcagtggcctggtta 95626
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 785 bits (396), Expect = 0.0 Identities = 547/592 (92%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||| |||| || |||||||||||||||||||||||||||| Sbjct: 4104 ggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaat 4162 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||||| Sbjct: 4163 aagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatg 4221 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4222 ggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 4281 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4282 aaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacgggg 4341 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccct 300 |||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||| Sbjct: 4342 ttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccct 4401 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 4402 agatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcat 4461 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4462 gggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 4521 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 4522 ggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagt 4581 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 4582 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 4636 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4637 ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 4688
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 781 bits (394), Expect = 0.0 Identities = 545/591 (92%), Gaps = 6/591 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 116175 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 116117 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||| Sbjct: 116116 aagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaattcata 116058 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116057 ggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 115998 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115997 aaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg- 115939 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||||||| Sbjct: 115938 ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcacccta 115879 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||||||| Sbjct: 115878 gatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatg 115819 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 115818 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgg 115759 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 115758 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 115699 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| ||| ||||||||| Sbjct: 115698 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatctctgac 115642 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115641 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 115591 Score = 781 bits (394), Expect = 0.0 Identities = 545/591 (92%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 85945 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 86003 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||| Sbjct: 86004 aagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaattcata 86062 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86063 ggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 86122 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 86123 aaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg- 86181 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||||||| Sbjct: 86182 ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcacccta 86241 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||||||| Sbjct: 86242 gatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatg 86301 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86302 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgg 86361 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 86362 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 86421 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| ||| ||||||||| Sbjct: 86422 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatctctgac 86478 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86479 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 86529
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 767 bits (387), Expect = 0.0 Identities = 544/592 (91%), Gaps = 6/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2078 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 2136 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| Sbjct: 2137 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcata 2195 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2196 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 2255 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2256 aaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacgggg 2315 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||| Sbjct: 2316 ttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacccta 2375 Query: 302 gatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcat 360 ||||| | |||||||||||||||||||| || | || ||||||| ||||||||||||| Sbjct: 2376 gatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcat 2435 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2436 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 2495 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 2496 ggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 2555 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 2556 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctga 2612 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 2613 ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 2664
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 767 bits (387), Expect = 0.0 Identities = 544/592 (91%), Gaps = 6/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118115 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 118057 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| Sbjct: 118056 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcata 117998 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117997 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 117938 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117937 aaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacgggg 117878 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||| Sbjct: 117877 ttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacccta 117818 Query: 302 gatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcat 360 ||||| | |||||||||||||||||||| || | || ||||||| ||||||||||||| Sbjct: 117817 gatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcat 117758 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117757 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 117698 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 117697 ggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 117638 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 117637 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctga 117581 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117580 ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Score = 767 bits (387), Expect = 0.0 Identities = 544/592 (91%), Gaps = 6/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 89987 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 90045 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| Sbjct: 90046 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcata 90104 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90105 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 90164 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90165 aaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacgggg 90224 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||| Sbjct: 90225 ttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacccta 90284 Query: 302 gatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcat 360 ||||| | |||||||||||||||||||| || | || ||||||| ||||||||||||| Sbjct: 90285 gatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcat 90344 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 90345 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 90404 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 90405 ggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 90464 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 90465 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctga 90521 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90522 ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 765 bits (386), Expect = 0.0 Identities = 542/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3924 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaag 3982 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| || Sbjct: 3983 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcaca 4041 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 || | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4042 agtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagca 4101 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4102 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 4161 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| | Sbjct: 4162 ttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacccca 4221 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||||||||||||| |||| |||| || | |||||||||||||| Sbjct: 4222 gatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatg 4281 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4282 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 4341 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 4342 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 4401 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||| Sbjct: 4402 aaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgac 4458 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 4459 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 4509
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 765 bits (386), Expect = 0.0 Identities = 542/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 35 ggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 93 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| Sbjct: 94 aagcatggatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcata 152 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 ggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 212 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 213 aaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 272 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||| |||||| | |||||||| |||||||||||| ||||| | | ||||| || Sbjct: 273 ttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcaccata 332 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 333 gatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccgagtagcatg 392 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 393 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgg 452 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 453 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtg 512 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||||||||||||||||||| ||| ||||||||| Sbjct: 513 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgac 569 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 570 cgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 765 bits (386), Expect = 0.0 Identities = 542/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 18 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 76 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| Sbjct: 77 aagtatagatccggagattcccgaataggttaaccttttaaactgc-tgctgaatccata 135 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 || |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 136 ggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaagagaaagca 195 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 196 aaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacgggg 255 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||| |||| | | |||| |||| ||||||||||||| ||||||| | |||||||| Sbjct: 256 ttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcacccta 315 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||| |||||||||| || ||||| ||||| ||||||||| |||| Sbjct: 316 gatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagtaacatg 375 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 435 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 436 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 495 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| | |||| ||||||||||||||| ||| |||||||||| Sbjct: 496 aaatagaacatgaaaccg---taagcttccaagcagtgggaggagaatcggatctctgac 552 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 553 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 603
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 765 bits (386), Expect = 0.0 Identities = 542/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 34 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaag 92 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| || Sbjct: 93 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcaca 151 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 || | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 152 agtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagca 211 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 212 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 271 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| | Sbjct: 272 ttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacccca 331 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||||||||||||| |||| |||| || | |||||||||||||| Sbjct: 332 gatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatg 391 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 451 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 452 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 511 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||| Sbjct: 512 aaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgac 568 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 569 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 765 bits (386), Expect = 0.0 Identities = 542/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 151211 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaag 151153 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| || Sbjct: 151152 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcaca 151094 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 || | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 151093 agtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagca 151034 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 151033 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 150974 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| | Sbjct: 150973 ttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacccca 150914 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||||||||||||| |||| |||| || | |||||||||||||| Sbjct: 150913 gatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatg 150854 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150853 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 150794 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 150793 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 150734 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||| Sbjct: 150733 aaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgac 150677 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 150676 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 150626 Score = 765 bits (386), Expect = 0.0 Identities = 542/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 117455 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaag 117513 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| || Sbjct: 117514 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcaca 117572 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 || | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 117573 agtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagca 117632 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117633 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 117692 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| | Sbjct: 117693 ttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacccca 117752 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||||||||||||| |||| |||| || | |||||||||||||| Sbjct: 117753 gatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatg 117812 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117813 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 117872 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 117873 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 117932 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||| Sbjct: 117933 aaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgac 117989 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 117990 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 118040
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 765 bits (386), Expect = 0.0 Identities = 542/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 34 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaag 92 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| || Sbjct: 93 aagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcaca 151 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 || | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 152 agtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagca 211 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 212 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 271 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| | Sbjct: 272 ttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacccca 331 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||||||||||||| |||| |||| || | |||||||||||||| Sbjct: 332 gatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatg 391 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 451 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 452 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 511 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||| Sbjct: 512 aaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgac 568 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 569 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 763 bits (385), Expect = 0.0 Identities = 545/595 (91%), Gaps = 9/595 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 35 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 93 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||| || ||||||||||||||| ||||||| ||||||||||||||| |||||||| ||| Sbjct: 94 aagtatggatccggagattcccgaataggttaaccttttaaactgc-tgctgaattcata 152 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 || |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 153 ggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaaagaaagca 212 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 213 aaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacgggg 272 Query: 242 ttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgccgcac 297 ||||||| |||| |||||| || ||| ||||||||||||||| ||||||| | |||| Sbjct: 273 ttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcctgcac 332 Query: 298 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 357 || |||||| | ||||||||| |||||||||| || | |||||||||| |||||||||| Sbjct: 333 cccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaacccgagtag 392 Query: 358 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 452 Query: 418 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 453 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 512 Query: 478 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 537 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 513 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctc 569 Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 570 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 624
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 763 bits (385), Expect = 0.0 Identities = 488/518 (94%), Gaps = 7/518 (1%) Strand = Plus / Minus Query: 73 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 132 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 133 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 193 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 253 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 311 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 312 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 372 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 431 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 432 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 491 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 492 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 551 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 552 ttgaagaatgagccggcgactcataggcagtggcttgg 589 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggcttgg 1
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 108 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 167 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 168 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 228 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 286 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 287 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 346 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 347 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 407 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 466 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 467 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 526 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 527 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 586 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 587 tggtta 592 |||||| Sbjct: 492 tggtta 497
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 753 bits (380), Expect = 0.0 Identities = 549/592 (92%), Gaps = 19/592 (3%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 699 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 641 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||| ||| |||| |||||||||||||| Sbjct: 640 aagcgtagatccggagattcccgaataggtca--ctt---gactg-ctgctgaatccatg 587 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa-gc 180 |||||||||||||| || |||| ||| ||||||||||||||||||||||||||| || Sbjct: 586 -gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagaggaaaagaaaggc 534 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 474 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 300 ||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 473 gttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccct 414 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 413 agatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcat 354 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 294 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 293 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 234 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||||||||||||||||||| | | | |||||| Sbjct: 233 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctga 178 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 126
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 751 bits (379), Expect = 0.0 Identities = 542/592 (91%), Gaps = 6/592 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 146525 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 146467 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| ||| Sbjct: 146466 gagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaattcata 146408 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 146407 ggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaagca 146348 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 146347 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 146288 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| ||||||| |||||||||||||||| ||||||| | | |||||| Sbjct: 146287 ttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtacccta 146228 Query: 302 gatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcat 360 ||||| | |||||||||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 146227 gatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtagcat 146168 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 146167 ggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 146108 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 146107 ggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagt 146048 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | ||||||||||||||||||| ||| |||| |||| Sbjct: 146047 gaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccctga 145991 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 145990 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 145939 Score = 751 bits (379), Expect = 0.0 Identities = 542/592 (91%), Gaps = 6/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111937 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaat 111995 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| ||| Sbjct: 111996 gagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaattcata 112054 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112055 ggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaagca 112114 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112115 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 112174 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 |||||||||||||||| ||||||| |||||||||||||||| ||||||| | | |||||| Sbjct: 112175 ttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtacccta 112234 Query: 302 gatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcat 360 ||||| | |||||||||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 112235 gatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtagcat 112294 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 112295 ggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 112354 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 112355 ggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagt 112414 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | ||||||||||||||||||| ||| |||| |||| Sbjct: 112415 gaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccctga 112471 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 112472 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 112523
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 737 bits (372), Expect = 0.0 Identities = 493/529 (93%), Gaps = 6/529 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 42 ggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaat 100 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| |||||||||||||||| |||||| |||||||| |||| | ||||||||||||| Sbjct: 101 aagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatg 159 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 219 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 279 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||| Sbjct: 280 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacccta 339 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 340 gatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 399 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 459 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 460 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtg 518 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 530 ||||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 519 aaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 728 bits (367), Expect = 0.0 Identities = 447/469 (95%), Gaps = 5/469 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 89 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct: 90 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatg 148 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 ggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 208 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 268 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| |||||||||||||||||||| || | | |||||||| Sbjct: 269 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcacccta 328 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 329 gatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 388 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 389 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--g 446 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 470 ||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 447 gtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 722 bits (364), Expect = 0.0 Identities = 437/459 (95%), Gaps = 2/459 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 11 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 69 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||| ||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||| Sbjct: 70 aagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgccgaatccatg 128 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 129 ggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagca 188 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 248 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| Sbjct: 249 ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcacccta 308 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 gatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 368 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 428 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 460 |||||||||||||||||||||||||||||||| |||||| Sbjct: 429 gtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 66 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 125 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 126 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 186 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 246 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 306 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 365 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 366 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 426 ccgata 431 |||||| Sbjct: 361 ccgata 366
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 700 bits (353), Expect = 0.0 Identities = 392/406 (96%), Gaps = 13/406 (3%) Strand = Plus / Minus Query: 192 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 252 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 312 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 371 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 372 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 426 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 427 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 487 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 546 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 547 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 75081 Score = 357 bits (180), Expect = 3e-95 Identities = 192/195 (98%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75678 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 75620 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 75619 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 75560 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75559 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 75500 Query: 182 aaagcgattcccgta 196 ||||||||||||||| Sbjct: 75499 aaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 123 gcaggcaagagacaacctggcgaactgaaacatcttagta 162 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 700 bits (353), Expect = 0.0 Identities = 392/406 (96%), Gaps = 13/406 (3%) Strand = Plus / Plus Query: 192 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 252 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 312 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 371 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 372 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 426 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 427 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 487 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 546 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 547 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 382457 Score = 357 bits (180), Expect = 3e-95 Identities = 192/195 (98%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381860 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 381918 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 381919 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 381978 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381979 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 382038 Query: 182 aaagcgattcccgta 196 ||||||||||||||| Sbjct: 382039 aaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 123 gcaggcaagagacaacctggcgaactgaaacatcttagta 162 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 123 gcaggcaagagacaacctggcgaactgaaacatcttagta 162 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 700 bits (353), Expect = 0.0 Identities = 392/406 (96%), Gaps = 13/406 (3%) Strand = Plus / Minus Query: 192 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 252 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 312 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 371 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 372 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 426 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 427 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 487 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 546 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 547 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 113172 Score = 357 bits (180), Expect = 3e-95 Identities = 192/195 (98%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113769 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 113711 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 113710 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 113651 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113650 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 113591 Query: 182 aaagcgattcccgta 196 ||||||||||||||| Sbjct: 113590 aaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 123 gcaggcaagagacaacctggcgaactgaaacatcttagta 162 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 700 bits (353), Expect = 0.0 Identities = 392/406 (96%), Gaps = 13/406 (3%) Strand = Plus / Minus Query: 192 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 252 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 312 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 371 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 372 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 426 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 427 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 487 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 546 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 547 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 367854 Score = 700 bits (353), Expect = 0.0 Identities = 392/406 (96%), Gaps = 13/406 (3%) Strand = Plus / Minus Query: 192 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 252 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 312 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 371 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 372 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 426 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 427 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 487 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 546 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 547 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 184459 Score = 357 bits (180), Expect = 3e-95 Identities = 192/195 (98%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368451 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 368393 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 368392 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 368333 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368332 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 368273 Query: 182 aaagcgattcccgta 196 ||||||||||||||| Sbjct: 368272 aaagcgattcccgta 368258 Score = 357 bits (180), Expect = 3e-95 Identities = 192/195 (98%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185056 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 184998 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 184997 aagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatg 184938 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184937 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 184878 Query: 182 aaagcgattcccgta 196 ||||||||||||||| Sbjct: 184877 aaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 123 gcaggcaagagacaacctggcgaactgaaacatcttagta 162 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 16 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 75 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123423 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 123364 Query: 76 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 135 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123363 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123304 Query: 136 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123244 Query: 196 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123184 Query: 256 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123124 Query: 316 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 375 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123123 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 422 bits (213), Expect = e-115 Identities = 216/217 (99%) Strand = Plus / Minus Query: 367 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 427 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 487 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 547 gcctgttgaagaatgagccggcgactcataggcagtg 583 ||||||||||||||||||||| ||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtg 122604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 16 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 75 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825964 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 12825905 Query: 76 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 135 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 12825845 Query: 136 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825844 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 12825785 Query: 196 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825784 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 12825725 Query: 256 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825724 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 12825665 Query: 316 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 375 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825664 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 422 bits (213), Expect = e-115 Identities = 216/217 (99%) Strand = Plus / Minus Query: 367 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 427 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 487 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 547 gcctgttgaagaatgagccggcgactcataggcagtg 583 ||||||||||||||||||||| ||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtg 12825145 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 312 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 371 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 674 bits (340), Expect = 0.0 Identities = 534/592 (90%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | ||||||||||| |||| || |||||||||||||||||||||||||||| Sbjct: 34 ggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcggggagttgaaaat 92 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| |||||||| ||| || ||||||| | ||||| |||| |||||||| Sbjct: 93 aagcatagatccgtagattcccgaatggggtaacctttcacactgc-tgctcaatccatg 151 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 152 ggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaaataaagca 211 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 212 aaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacgggg 271 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccct 300 |||||||||||||||| |||||| ||||||||||||||||| | || | || ||||||| Sbjct: 272 ttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccct 331 Query: 301 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 360 ||||||| |||||||||||| | |||||||||||| || ||||||||||||||||||| Sbjct: 332 agatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagtagcat 391 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 451 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| |||| ||| Sbjct: 452 ggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattggggagt 510 Query: 481 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 540 |||||||||| |||||||| | |||| ||||||||||||||| | || | |||||| Sbjct: 511 gaaatagaacatgaaaccg---taagctaccaagcagtgggaggagccaggg--ctctga 565 Query: 541 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 566 ccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 617
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 93 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 152 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 153 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 213 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 272 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 273 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 332 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 333 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 392 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 393 gaccaccttgcaaggctaaatactcctgggtg 424 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 561 bits (283), Expect = e-157 Identities = 286/287 (99%) Strand = Plus / Plus Query: 306 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 365 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 366 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 426 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 486 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 546 tgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 287
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 521 bits (263), Expect = e-145 Identities = 365/393 (92%), Gaps = 6/393 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2633 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 2691 Query: 62 aagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccat 120 |||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 2692 aagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccac 2750 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2751 gggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagc 2810 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2811 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 2870 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacc 298 ||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| ||||| Sbjct: 2871 gttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacc 2930 Query: 299 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 358 ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 2931 ctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagc 2989 Query: 359 atggggcacgtggaatcccgtgtgaatcagcaa 391 || |||||||||||||||||||||||||||||| Sbjct: 2990 atagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 521 bits (263), Expect = e-145 Identities = 365/393 (92%), Gaps = 6/393 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 888 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 946 Query: 62 aagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccat 120 |||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 947 aagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccac 1005 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1006 gggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagc 1065 Query: 181 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 aaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg 1125 Query: 241 gttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacc 298 ||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| ||||| Sbjct: 1126 gttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacc 1185 Query: 299 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 358 ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1186 ctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagc 1244 Query: 359 atggggcacgtggaatcccgtgtgaatcagcaa 391 || |||||||||||||||||||||||||||||| Sbjct: 1245 atagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 513 bits (259), Expect = e-142 Identities = 504/584 (86%), Gaps = 4/584 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||| |||| |||||||||||||||||||| |||||| Sbjct: 143953 ggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaaaat 144011 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 | | |||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct: 144012 aggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaattcaga 144071 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | |||||| Sbjct: 144072 agcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagca 144131 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||| Sbjct: 144132 aaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacgggg 144191 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||| || || | || | ||||||||||| ||||||||| |||||| | Sbjct: 144192 ttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcacccca 144251 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||||||| ||| | |||||| | |||| |||| ||||||||| Sbjct: 144252 gatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatg 144311 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 144312 gggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctga 144371 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| Sbjct: 144372 gtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtg 144431 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| || Sbjct: 144432 aaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaac 144488 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 144489 cgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 144532 Score = 513 bits (259), Expect = e-142 Identities = 504/584 (86%), Gaps = 4/584 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||| |||| |||||||||||||||||||| |||||| Sbjct: 88898 ggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaaaat 88840 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 | | |||||||||||||||||| ||||||| |||||| |||||||||||||||| || Sbjct: 88839 aggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaattcaga 88780 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | |||||| Sbjct: 88779 agcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagca 88720 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||| Sbjct: 88719 aaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacgggg 88660 Query: 242 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 301 ||||||||||| || || | || | ||||||||||| ||||||||| |||||| | Sbjct: 88659 ttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcacccca 88600 Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 361 ||||| | ||||||||||||| ||| | |||||| | |||| |||| ||||||||| Sbjct: 88599 gatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatg 88540 Query: 362 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 421 ||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 88539 gggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctga 88480 Query: 422 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 481 |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| Sbjct: 88479 gtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtg 88420 Query: 482 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 541 ||||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| || Sbjct: 88419 aaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaac 88363 Query: 542 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 88362 cgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 88319
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 254 aatacaagcgt 264 ||||||||||| Sbjct: 283 aatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 254 aatacaagcgt 264 ||||||||||| Sbjct: 283 aatacaagcgt 293
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 462 bits (233), Expect = e-127 Identities = 236/237 (99%) Strand = Plus / Plus Query: 356 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 416 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 476 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 535 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 536 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 237
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 460 bits (232), Expect = e-126 Identities = 312/336 (92%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 16 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 75 |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 177078 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccgg 177137 Query: 76 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 135 |||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 177138 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagag 177196 Query: 136 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 195 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177197 aaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 177256 Query: 196 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 255 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177257 agtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaa 177316 Query: 256 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 314 ||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 177317 tacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 177376 Query: 315 cagtagccgaaagcatcactagcttatgctctgacc 350 |||||||||||||||||||||||||| ||||||||| Sbjct: 177377 cagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 115 bits (58), Expect = 2e-22 Identities = 58/58 (100%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 177462 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagc 164 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagc 164 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 442 bits (223), Expect = e-121 Identities = 499/587 (85%), Gaps = 18/587 (3%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 139224 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 139167 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 129 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 139166 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 139111 Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 139110 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 139051 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 249 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 139050 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 138991 Query: 250 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 305 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 138990 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 138932 Query: 306 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 365 | || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 138931 gttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggc 138872 Query: 366 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 425 ||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 138871 acgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtga 138812 Query: 426 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 485 ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 138811 ccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaat 138752 Query: 486 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 545 ||||| |||||||| | ||||||| |||||||||||| ||| |||||||||||||| Sbjct: 138751 agaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcg 138695 Query: 546 tgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||| |||||| | ||| |||||| Sbjct: 138694 tgcctgttgaagaatgagccggcgacttataggcggcggcctggtta 138648 Score = 442 bits (223), Expect = e-121 Identities = 499/587 (85%), Gaps = 18/587 (3%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 82653 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 82710 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 129 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 82711 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 82766 Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 82767 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 82826 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 249 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 82827 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 82886 Query: 250 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 305 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 82887 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 82945 Query: 306 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 365 | || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 82946 gttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggc 83005 Query: 366 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 425 ||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 83006 acgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtga 83065 Query: 426 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 485 ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 83066 ccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaat 83125 Query: 486 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 545 ||||| |||||||| | ||||||| |||||||||||| ||| |||||||||||||| Sbjct: 83126 agaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcg 83182 Query: 546 tgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||| |||||| | ||| |||||| Sbjct: 83183 tgcctgttgaagaatgagccggcgacttataggcggcggcctggtta 83229
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 440 bits (222), Expect = e-120 Identities = 326/360 (90%), Gaps = 3/360 (0%) Strand = Plus / Minus Query: 233 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 292 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 293 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 352 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 353 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 413 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 472 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 473 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 532 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 533 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 32 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 91 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 92 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 151 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 152 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 211 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 212 atgggagcagcctaaaccgt 231 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 438 bits (221), Expect = e-120 Identities = 221/221 (100%) Strand = Plus / Plus Query: 372 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 432 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 492 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 552 ttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggtta 221
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 309 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 368 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 369 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 429 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 488 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 489 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 548 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 549 ctgttgaagaatgagccggcgactcataggcagtggcttg 588 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 88 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 147 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 148 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 207 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 208 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 267 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 268 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 327 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 328 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 387 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 388 gcaaggaccaccttgcaag 406 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 415 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 474 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 475 ggtagtgaaatagaacgtgaaacc 498 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggtta 3192 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||| ||| |||||||||||||||| | |||||| |||||||| |||||| Sbjct: 3757 acgaggaagggcatagttagcgacgaaatgcttcagagagttgcaaataagcgtagatca 3698 Query: 74 ggag 77 |||| Sbjct: 3697 ggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 185 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 244 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 245 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 303 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 304 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 364 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 423 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 424 gaccgata 431 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 379 bits (191), Expect = e-102 Identities = 234/246 (95%), Gaps = 2/246 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 79736 ggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaat 79678 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| || | Sbjct: 79677 aagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacg 79619 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79618 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 79559 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 79558 aaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacgggg 79499 Query: 242 ttgtgg 247 |||||| Sbjct: 79498 ttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 369 bits (186), Expect = 7e-99 Identities = 198/201 (98%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75800 ggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 75858 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 75859 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgcggaatccatg 75918 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75919 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 75978 Query: 182 aaagcgattcccgtagtagcg 202 ||||||||||||||||||||| Sbjct: 75979 aaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 469 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggcgaactgaaacatcttag 160 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 294 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 353 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 354 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 413 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 414 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 473 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 474 gggtagtgaaatagaacgtgaaaccgt 500 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 347 bits (175), Expect = 3e-92 Identities = 469/557 (84%), Gaps = 15/557 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 217 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 276 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 277 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 336 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 337 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 395 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 396 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 455 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 456 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 515 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 516 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 575 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594 Query: 576 aggcagtggcttggtta 592 | | |||||| |||||| Sbjct: 595 aagtagtggcctggtta 611
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 315 bits (159), Expect = 9e-83 Identities = 224/245 (91%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 348 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 407 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 408 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 528 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 587 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 588 ggtta 592 ||||| Sbjct: 615 ggtta 619 Score = 268 bits (135), Expect = 2e-68 Identities = 207/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct: 22 ggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctgagaac 80 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| || Sbjct: 81 aagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgata 140 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 200 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 231 |||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 201 aaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 315 bits (159), Expect = 9e-83 Identities = 224/245 (91%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 348 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 407 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 408 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 528 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 587 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 588 ggtta 592 ||||| Sbjct: 628 ggtta 632 Score = 268 bits (135), Expect = 2e-68 Identities = 207/230 (90%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct: 35 ggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctgagaac 93 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| || Sbjct: 94 aagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgata 153 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 213 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 231 |||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 214 aaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 313 bits (158), Expect = 4e-82 Identities = 223/244 (91%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 588 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 589 gtta 592 |||| Sbjct: 733 gtta 736 Score = 258 bits (130), Expect = 2e-65 Identities = 205/229 (89%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| |||||||||||||||||||||||||||||||| || ||| || Sbjct: 139 ggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgggaagctgagaac 197 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| || Sbjct: 198 aagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgata 257 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 gggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 317 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 318 aaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 293 bits (148), Expect = 3e-76 Identities = 240/269 (89%), Gaps = 5/269 (1%) Strand = Plus / Plus Query: 324 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 383 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 384 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 443 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 444 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 503 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 504 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 563 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 564 ccggcgactcataggcagtggcttggtta 592 ||||||||||||| | |||||| |||||| Sbjct: 608 ccggcgactcataagtagtggcctggtta 636 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 123 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 182 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 183 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 242 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 243 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 302 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 303 a 303 | Sbjct: 325 a 325
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 360 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 481 gaaatagaacgtgaaaccgtgctgagctcc 510 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 360 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 481 gaaatagaacgtgaaaccgtgctgagctcc 510 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 360 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 481 gaaatagaacgtgaaaccgtgctgagctcc 510 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 tgagctcccaagcagtgggaggggaaagtgatc 535 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 302 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 360 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 361 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 420 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 421 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 481 gaaatagaacgtgaaaccgtgctgagctcc 510 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 tgagctcccaagcagtgggaggggaaagtgatc 535 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 287 bits (145), Expect = 2e-74 Identities = 279/323 (86%), Gaps = 3/323 (0%) Strand = Plus / Plus Query: 270 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 329 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 330 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 389 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 390 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 449 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 450 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 509 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 510 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 569 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 570 actcataggcagtggcttggtta 592 ||| |||||||||||| |||||| Sbjct: 599 acttataggcagtggcgtggtta 621 Score = 256 bits (129), Expect = 7e-65 Identities = 222/252 (88%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||| | ||||||||||||||||||||||| || || Sbjct: 35 ggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcgaac 93 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||||| Sbjct: 94 aagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccata 153 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 ggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 213 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 214 aaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcgggg 273 Query: 242 ttgtgggagagc 253 |||||||||||| Sbjct: 274 ttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 287 bits (145), Expect = 2e-74 Identities = 279/323 (86%), Gaps = 3/323 (0%) Strand = Plus / Minus Query: 270 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 329 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 330 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 389 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 390 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 449 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 450 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 509 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 510 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 569 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 570 actcataggcagtggcttggtta 592 ||| |||||||||||| |||||| Sbjct: 124666 acttataggcagtggcgtggtta 124644 Score = 287 bits (145), Expect = 2e-74 Identities = 279/323 (86%), Gaps = 3/323 (0%) Strand = Plus / Plus Query: 270 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 329 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 330 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 389 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 390 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 449 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 450 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 509 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 510 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 569 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 570 actcataggcagtggcttggtta 592 ||| |||||||||||| |||||| Sbjct: 95200 acttataggcagtggcgtggtta 95222 Score = 256 bits (129), Expect = 7e-65 Identities = 222/252 (88%), Gaps = 1/252 (0%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||| | ||||||||||||||||||||||| || || Sbjct: 125230 ggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcgaac 125172 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||||| Sbjct: 125171 aagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccata 125112 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125111 ggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 125052 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 125051 aaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcgggg 124992 Query: 242 ttgtgggagagc 253 |||||||||||| Sbjct: 124991 ttgtgggagagc 124980 Score = 256 bits (129), Expect = 7e-65 Identities = 222/252 (88%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||| | ||||||||||||||||||||||| || || Sbjct: 94636 ggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcgaac 94694 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||||| Sbjct: 94695 aagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccata 94754 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 181 ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94755 ggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94814 Query: 182 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 241 |||||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 94815 aaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcgggg 94874 Query: 242 ttgtgggagagc 253 |||||||||||| Sbjct: 94875 ttgtgggagagc 94886
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 283 bits (143), Expect = 3e-73 Identities = 220/245 (89%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 348 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 407 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 408 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 528 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 587 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 588 ggtta 592 ||||| Sbjct: 574 ggtta 578 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 19 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 77 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 78 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 137 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 138 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 198 tagcggcgagcgaaatgggagcagcctaaacc 229 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 281 bits (142), Expect = 1e-72 Identities = 219/244 (89%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 588 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 589 gtta 592 |||| Sbjct: 615 gtta 618 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 33 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 92 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 93 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 152 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 212 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaacc 229 |||||||||||||||||| |||| ||| ||||||| Sbjct: 213 ttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 281 bits (142), Expect = 1e-72 Identities = 219/244 (89%), Gaps = 3/244 (1%) Strand = Plus / Minus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 588 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 589 gtta 592 |||| Sbjct: 115047 gtta 115044 Score = 281 bits (142), Expect = 1e-72 Identities = 219/244 (89%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 588 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 589 gtta 592 |||| Sbjct: 86941 gtta 86944 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 115630 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 115571 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 115570 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 115511 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115510 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 115451 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaacc 229 |||||||||||||||||| |||| ||| ||||||| Sbjct: 115450 ttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 86358 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 86417 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 86418 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 86477 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86478 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 86537 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaacc 229 |||||||||||||||||| |||| ||| ||||||| Sbjct: 86538 ttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 281 bits (142), Expect = 1e-72 Identities = 148/150 (98%) Strand = Plus / Minus Query: 443 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 502 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 503 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 562 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 563 gccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggtta 107901
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 134 acaacctggcgaactgaaacat 155 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 523 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 564 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 441 taccgtgagggaaaggtgaaaagaacc 467 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 134 acaacctggcgaactgaaacat 155 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 134 acaacctggcgaactgaaacat 155 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 134 acaacctggcgaactgaaacat 155 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1590 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 1649 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1650 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 1709 Query: 134 acaacctggcgaactgaaac 153 |||||||||||||||||||| Sbjct: 1710 acaacctggcgaactgaaac 1729
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 268 bits (135), Expect = 2e-68 Identities = 219/244 (89%), Gaps = 6/244 (2%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 588 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 589 gtta 592 |||| Sbjct: 644 gtta 647 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 189 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 228 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 268 bits (135), Expect = 2e-68 Identities = 219/244 (89%), Gaps = 6/244 (2%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 588 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 589 gtta 592 |||| Sbjct: 605 gtta 608 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 189 ttcccgtagtagcggcgagcgaa 211 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 264 bits (133), Expect = 3e-67 Identities = 258/299 (86%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 294 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 353 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 354 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 413 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 414 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 473 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 474 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 533 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 534 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 4079 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 4138 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 4139 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 4197 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4198 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 4257 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaa 227 ||||||||||||||||||||||| |||||||| Sbjct: 4258 tgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 264 bits (133), Expect = 3e-67 Identities = 258/299 (86%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 294 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 353 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 354 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 413 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 414 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 473 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 474 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 533 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 534 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Score = 210 bits (106), Expect = 4e-51 Identities = 188/214 (87%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||||||| ||| || |||| || |||||| ||||||| ||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagag 164 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaa 227 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 264 bits (133), Expect = 3e-67 Identities = 258/299 (86%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 294 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 353 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 354 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 413 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 414 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 473 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 474 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 533 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 534 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 164 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaa 227 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 254 bits (128), Expect = 3e-64 Identities = 220/250 (88%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 343 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 402 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 403 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 462 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 463 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 522 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 523 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 582 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 583 ggcttggtta 592 ||| |||||| Sbjct: 575 ggcctggtta 584 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 136 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 195 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 196 agtagcggcgagcgaaatgggagcagcctaaacc 229 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcgg 49 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 277 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 336 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 337 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 396 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 397 accttgcaaggctaaatactcctgggtgaccga 429 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||||| || |||||||| ||||||||||| || ||| Sbjct: 22 ggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctggaaac 80 Query: 62 aagcatagatccggagattcccaaataggtcaacct 97 |||| | |||||| |||||||| |||||| |||||| Sbjct: 81 aagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||||| || |||||||| ||||||||||| || ||| Sbjct: 1788 ggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctggaaac 1846 Query: 62 aagcatagatccggagattcccaaataggtcaacct 97 |||| | |||||| |||||||| |||||| |||||| Sbjct: 1847 aagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 240 bits (121), Expect = 4e-60 Identities = 219/251 (87%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 342 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 401 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 402 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 461 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 462 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 521 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 522 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 581 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 582 tggcttggtta 592 ||||| ||||| Sbjct: 617 tggctgggtta 627 Score = 188 bits (95), Expect = 1e-44 Identities = 187/215 (86%), Gaps = 2/215 (0%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| ||||||||||| |||||||||||| ||||| | | ||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatcc 105 Query: 74 ggagattcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaaga 132 |||||||||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||| Sbjct: 106 ggagattcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataaga 164 Query: 133 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 192 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 165 gacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttc 224 Query: 193 cgtagtagcggcgagcgaaatgggagcagcctaaa 227 | ||||||||||||||||||||||| |||||||| Sbjct: 225 ctgagtagcggcgagcgaaatgggagaagcctaaa 259
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 238 bits (120), Expect = 2e-59 Identities = 170/183 (92%), Gaps = 3/183 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaa 60 ||||||||| | ||||||||| |||||| ||||||||||| ||||||||||||||||||| Sbjct: 89848 ggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaa 89790 Query: 61 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 120 ||||| |||||||||||||||| ||||||| |||||||| |||||| |||||||||||| Sbjct: 89789 taagcgtagatccggagattccggaataggttaaccttttgaactgc-tgctgaatccat 89731 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 89730 gggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagc 89671 Query: 181 aaa 183 ||| Sbjct: 89670 aaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 238 bits (120), Expect = 2e-59 Identities = 170/183 (92%), Gaps = 3/183 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaa 60 ||||||||| | ||||||||| |||||| ||||||||||| ||||||||||||||||||| Sbjct: 422 ggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaa 480 Query: 61 taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccat 120 ||||| |||||||||||||||| ||||||| |||||||| |||||| |||||||||||| Sbjct: 481 taagcgtagatccggagattccggaataggttaaccttttgaactgc-tgctgaatccat 539 Query: 121 gagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagc 180 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 540 gggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagc 599 Query: 181 aaa 183 ||| Sbjct: 600 aaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 423 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 236 bits (119), Expect = 7e-59 Identities = 214/244 (87%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 588 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 589 gtta 592 |||| Sbjct: 611 gtta 614 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 34 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 93 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 94 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 153 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 154 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 213 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 214 gggagcagcctaaaccg 230 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 296 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 355 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 356 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 415 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 416 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 475 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 476 gtagtgaaatagaacgtgaaa 496 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 8e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 97 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 98 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 157 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 158 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 217 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 218 gcagcctaaaccgtgaaaacggggttg 244 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggtta 623
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 230 bits (116), Expect = 4e-57 Identities = 215/245 (87%), Gaps = 6/245 (2%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 467 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 528 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 587 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 588 ggtta 592 ||||| Sbjct: 590 ggtta 594 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 135 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 194 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 195 tagtagcggcgagcgaaatgggagcagcctaaac 228 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 228 bits (115), Expect = 2e-56 Identities = 213/245 (86%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 348 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 407 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 408 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 528 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 587 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 588 ggtta 592 ||||| Sbjct: 1021 ggtta 1025 Score = 172 bits (87), Expect = 8e-40 Identities = 187/218 (85%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| ||||||||||||||||||| | || || ||| || | || Sbjct: 449 acgatgaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaaccc 506 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 |||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||| Sbjct: 507 ggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagag 565 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 231 |||||| ||||||||||| |||| ||||||||||||| Sbjct: 626 ttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 491 gtgaaa 496 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 ag 218 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 491 gtgaaa 496 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 agcagcctaa 226 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 218 bits (110), Expect = 2e-53 Identities = 208/240 (86%), Gaps = 3/240 (1%) Strand = Plus / Plus Query: 353 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 412 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 413 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 472 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 473 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 532 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 533 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Score = 190 bits (96), Expect = 4e-45 Identities = 201/236 (85%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| |||||||||||||||||||||| || || ||||||| |||| Sbjct: 46 acgaagaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatcc 105 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 106 gaagattcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagag 165 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 | ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccc 225 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 249 ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 226 tcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 2e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 529 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 189 ttcccgtagtagcggcgagcgaaatggga 217 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 212 bits (107), Expect = 1e-51 Identities = 213/246 (86%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 526 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 527 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 586 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 587 tggtta 592 |||||| Sbjct: 621 tggtta 626 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccg 499 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 34 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 93 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 94 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 153 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 154 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 213 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 214 gggagcagcctaaacc 229 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgact 572 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 212 bits (107), Expect = 1e-51 Identities = 213/246 (86%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 526 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 527 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 586 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 587 tggtta 592 |||||| Sbjct: 621 tggtta 626 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 311 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 370 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 371 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 430 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 431 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 490 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 491 gtgaaa 496 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 38 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 96 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 97 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 156 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 157 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 216 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 217 ag 218 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 576 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 210 bits (106), Expect = 4e-51 Identities = 205/238 (86%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| ||||||||||||||||||||||| || || ||| |||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatcc 105 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 | |||||||| |||||| |||||| || ||| |||| ||| ||| | |||| |||| Sbjct: 106 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagag 165 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 225 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 251 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 226 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 353 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 412 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 413 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 472 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 473 tgggtagtgaaatagaacgtgaaacc 498 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 125 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 184 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 185 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 229 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgact 572 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 148 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 207 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 208 cgaaatgggagcagcctaaacc 229 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 536 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 526 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 527 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 584 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 348 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 407 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 408 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 468 cc 469 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 127 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 186 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 187 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Plus Query: 539 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 615 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||||||||||||| | | ||||||||||||||||||||||| ||| | || |||||| Sbjct: 46 acgaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgagatcc 105 Query: 74 ggagat 79 |||||| Sbjct: 106 ggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 353 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 412 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 413 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 472 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 473 tgggtagtgaaatagaacgtgaaacc 498 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| ||||||||||||||||||||||| || || ||| ||| |||| Sbjct: 1813 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatcc 1872 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 1873 gaagattcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagag 1932 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 1933 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 1992 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 249 |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1993 ttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 198 bits (100), Expect = 1e-47 Identities = 209/238 (87%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 467 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 528 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggc 672 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 189 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 409 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 525 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 526 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 586 tt 587 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 148 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 207 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 208 cgaa 211 |||| Sbjct: 238 cgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 148 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 207 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 208 cgaaatgggagcagcctaaacc 229 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 204 cgagcgaaatgggagcagcctaaac 228 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 586 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 97 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 689 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 97 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 148 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 207 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 208 cgaaatgggagcagcctaaacc 229 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 641
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 409 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 525 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 526 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 586 tt 587 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 148 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 207 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 208 cgaa 211 |||| Sbjct: 219 cgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 151752 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 42451
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 409 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 525 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 526 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 586 tt 587 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 148 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 207 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 208 cgaa 211 |||| Sbjct: 238 cgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 689 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 97 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 204 cgagcgaaatgggagcagcctaaac 228 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 586 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 97 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 623
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 708
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 196 bits (99), Expect = 6e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Minus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 467 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 468 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 526 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 527 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 155605 Score = 196 bits (99), Expect = 6e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 467 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 468 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 526 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 527 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 78287 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 189 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 229 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 189 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 229 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 102 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 103 a 103 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 102 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 103 a 103 | Sbjct: 77725 a 77725
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 352 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 411 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 412 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 471 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 472 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 531 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 532 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 580 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 469 ccagtgggtagtgaaatagaacgtgaaacc 498 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| ||||||||| | || |||||||| ||||||||||| || ||| Sbjct: 14 ggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctggaaac 72 Query: 62 aagcatagatccggagattcccaaataggtcaacct 97 ||||| ||||||||||||||| |||||| |||||| Sbjct: 73 aagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgact 572 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 457 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 516 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 517 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 566 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 353 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 412 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 413 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 472 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 473 tgggtagtgaaatagaacgtgaaacc 498 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||||| |||||||||||||||| |||||| || || ||| |||||||| Sbjct: 3080 acgaagaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatcc 3139 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 133 | |||||||| |||||| |||||| || ||| |||| ||| ||| |||| |||| Sbjct: 3140 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagag 3199 Query: 134 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 193 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 3200 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 3259 Query: 194 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 251 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3260 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 3655
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 469 ccagtgggtagtgaaatagaacgtgaaacc 498 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgact 572 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 34 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 93 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 94 acct 97 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 352 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 411 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 412 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 471 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 472 gtgggtagtgaaatagaacgtgaaaccgt 500 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 545 gtgcctgttgaagaatgagccggcgactcatagg 578 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 467 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 527 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 528 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 572 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 189 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 625 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 97 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggtta 640
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggtta 170886 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggtta 122040 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/96 (83%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| |||||||||||||| |||||||| || ||||||| || || Sbjct: 171484 ggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctggaagc 171426 Query: 62 aagcatagatccggagattcccaaataggtcaacct 97 |||| ||||||||||||||| |||||| |||||| Sbjct: 171425 aagctctgatccggagattcccgaatagggcaacct 171390 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/96 (83%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| |||||||||||||| |||||||| || ||||||| || || Sbjct: 121442 ggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctggaagc 121500 Query: 62 aagcatagatccggagattcccaaataggtcaacct 97 |||| ||||||||||||||| |||||| |||||| Sbjct: 121501 aagctctgatccggagattcccgaatagggcaacct 121536
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 186 bits (94), Expect = 6e-44 Identities = 205/238 (86%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 528 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 529 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 797 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 229 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 524 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 130 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 189 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 190 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggtta 631 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/96 (83%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| |||||||||||||| |||||||| || ||||||| || || Sbjct: 33 ggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctggaagc 91 Query: 62 aagcatagatccggagattcccaaataggtcaacct 97 |||| ||||||||||||||| |||||| |||||| Sbjct: 92 aagctctgatccggagattcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 467 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 468 cccagtgggtagtgaaatagaacgtgaaaccgt 500 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 182/218 (83%), Gaps = 2/218 (0%) Strand = Plus / Plus Query: 14 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 73 |||| ||||||||| | || |||||||| ||||||||||| || | | ||| | ||||| Sbjct: 33 acgatgaagggcgtggtaaccgacgaaacgcttcggggagctggatacgagctttgatcc 92 Query: 74 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc-aggcaaga 132 | |||||||| |||||| |||||| || ||| | | ||||| ||| ||| | | |||| Sbjct: 93 gaagattcccgaatagggcaacctcttggactccttagtgaattcat-agctaagaaaga 151 Query: 133 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 192 || |||| || ||| ||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 152 gataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcc 211 Query: 193 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 | ||||||||||||||||||||||| |||||||||||| Sbjct: 212 cttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggtta 684
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 467 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 468 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 524 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 525 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 578 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 113 bits (57), Expect = 7e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 37 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 96 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 97 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 155 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 156 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 215 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 216 gagcagcctaaac 228 || |||||||||| Sbjct: 229 gaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgt 500 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 19 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 78 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 79 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 138 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 139 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 198 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 199 agcggcgagcgaaatgggagcagcctaaaccg 230 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 536 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 612
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 469 ccagtgggtagtgaaatagaacgtgaaacc 498 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 102 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 103 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 162 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 163 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 222 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 223 ctaaacc 229 ||||||| Sbjct: 253 ctaaacc 259 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 637
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 469 ccagtgggtagtgaaatagaacgtgaaacc 498 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 144 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 203 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 204 cgagcgaaatgggagcagcctaaacc 229 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgact 572 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 469 ccagtgggtagtgaaatagaacgtgaaacc 498 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 43 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 102 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 103 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 162 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 163 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 222 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 223 ctaaacc 229 ||||||| Sbjct: 253 ctaaacc 259 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 637
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 176 bits (89), Expect = 5e-41 Identities = 152/172 (88%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 2 ggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaat 61 ||||||||| | |||| |||||||||| || |||||||| ||||||||||| |||||| Sbjct: 736 ggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcggggagctgaaaag 794 Query: 62 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 121 |||||| ||||||||||||||| |||||| |||||| || |||| |||||||||| ||| Sbjct: 795 aagcattgatccggagattcccgaatagggcaacctcttgaacttcctgctgaattcata 854 Query: 122 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 173 ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 ggcaggatagagacaacctggcgaactgaaacatcttagtagccagaggaaa 906
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 352 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 411 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 412 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 471 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 472 gtgggtagtgaaatagaacgtgaaaccgt 500 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 536 tctgaccgcgtgcctgttgaagaatgagccggcga 570 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 469 ccagt-gggtagtgaaatagaacgtgaaaccgt 500 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 129 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 188 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 189 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 230 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggtta 768
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 201 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 202 ggcgagcgaaatgggagcagcctaaacc 229 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 578 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 201 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 202 ggcgagcgaaatgggagcagcctaaacc 229 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 578 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 145 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 204 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 205 gagcgaaatgggagcagcctaaacc 229 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 201 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 202 ggcgagcgaaatgggagcagcctaaacc 229 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 201 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 202 ggcgagcgaaatgggagcagcctaaacc 229 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 578 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 201 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 202 ggcgagcgaaatgggagcagcctaaacc 229 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 201 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 202 ggcgagcgaaatgggagcagcctaaacc 229 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 349 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 408 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 409 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 468 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 469 ccagtgggtagtgaaatagaacgtgaaaccgtg 501 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 142 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 201 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 202 ggcgagcgaaatgggagcagcctaaacc 229 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 538 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 348 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 407 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 408 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 467 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 468 c 468 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 135 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 194 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 195 tagtagcggcgagcgaaatgggagcagcctaaaccg 230 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 271 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 320 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,071,502 Number of Sequences: 3902068 Number of extensions: 4071502 Number of successful extensions: 120618 Number of sequences better than 10.0: 26617 Number of HSP's better than 10.0 without gapping: 26445 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 76410 Number of HSP's gapped (non-prelim): 42251 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
