Clone Name | basd3g15 |
---|---|
Clone Library Name | barley_pub |
>BSPB_POPDE (Q09117) Bark storage protein B precursor| Length = 312 Score = 47.8 bits (112), Expect = 8e-06 Identities = 21/51 (41%), Positives = 33/51 (64%) Frame = +3 Query: 3 NMDIQGRXFXFGTIXGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWG 155 ++DI GR F GT+ G S+V V TG +N T Q+LL+ F + G++++G Sbjct: 56 SVDIAGRRFHSGTLNGSSIVYVKTGSHSVNMATTLQILLARFSIHGVIYFG 106
>BSPA_POPDE (Q07469) Bark storage protein A precursor| Length = 312 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +3 Query: 3 NMDIQGRXFXFGTIXGQSVVMVMTGLSMLNAGLTTQMLLSLFRVKGIVHWG 155 ++DI GR F GT+ G S+V V TG +N T Q+LL F + G++++G Sbjct: 56 SVDIAGRRFHSGTLNGSSIVYVKTGSPSVNMATTLQILLVRFNIHGVIYFG 106
>Y2293_MYCTU (Q50673) Hypothetical protein Rv2293c/MT2350 precursor| Length = 246 Score = 32.7 bits (73), Expect = 0.28 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +3 Query: 21 RXFXFGTIXGQSVVMVMTGLSMLNAGLTTQMLLSLF 128 R + G+I G+ V++ MTG+ ++NA TT+ + F Sbjct: 69 RRYYLGSISGKKVIVAMTGIGLVNATNTTETAFARF 104
>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining| factor) Length = 311 Score = 29.3 bits (64), Expect = 3.1 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +2 Query: 5 HGHPRAXVSLWNHXRPKRRHGHDRTEHAQRWSDHP 109 H H + L NH +++ HD + Q++ DHP Sbjct: 206 HDHQQQQQQLHNHHHQQQQQFHDYPQQQQQFHDHP 240
>NCKX_DROME (Q9U6A0) Sodium/potassium/calcium exchanger| (Na(+)/K(+)/Ca(2+)-exchange protein) Length = 856 Score = 28.9 bits (63), Expect = 4.0 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -2 Query: 143 DALHPEQAQQHLGGQTSVEHAQSCHDHDDALAXDGSKXKXSPLD 12 DA P A+QH GG S Q+ +H+D L G+ + S D Sbjct: 214 DAAKPRPAKQHFGGSNSNSPNQN-QNHNDVLGGVGAPSQTSGED 256
>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 476 Score = 27.7 bits (60), Expect = 9.0 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 1/47 (2%) Frame = +2 Query: 5 HGHPRAXVSLWNHXRPKRRHGHDRTE-HAQRWSDHPDAAEPVPGEGH 142 HGH S+W+ HGH R E H H + G GH Sbjct: 69 HGHGHTHESIWHGHAHSHDHGHSREELHHGHSHGHSHDSLHHGGHGH 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,821,785 Number of Sequences: 219361 Number of extensions: 313860 Number of successful extensions: 1253 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1250 length of database: 80,573,946 effective HSP length: 27 effective length of database: 74,651,199 effective search space used: 1791628776 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)