>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA
          Length = 996

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                       
Query: 93  gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtncactgg 152
           ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 229 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 288

               
Query: 153 ggca 156
           ||||
Sbjct: 289 ggca 292

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                           
Query: 93      gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtncactgg 152
               ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 7185808 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 7185749

                   
Query: 153     ggca 156
               ||||
Sbjct: 7185748 ggca 7185745



 Score = 46.1 bits (23), Expect = 0.031
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                      
Query: 48      ggccaaagcgtcgtcatggtcatgacaggactgagcatg 86
               ||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 7186047 ggccaaaacgttgtcatggtcatgacagggcttagcatg 7186009

>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                         
Query: 93    gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtncactgg 152
             ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 80456 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 80397

                 
Query: 153   ggca 156
             ||||
Sbjct: 80396 ggca 80393



 Score = 46.1 bits (23), Expect = 0.031
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 48    ggccaaagcgtcgtcatggtcatgacaggactgagcatg 86
             ||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 80695 ggccaaaacgttgtcatggtcatgacagggcttagcatg 80657

>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 203279

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 109    agatgctgctgagcctgttcc 129
              |||||||||||||||||||||
Sbjct: 132755 agatgctgctgagcctgttcc 132735

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     agatgctgctgagcctgttc 128
               ||||||||||||||||||||
Sbjct: 1737145 agatgctgctgagcctgttc 1737126

>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and
             OCTN1 gene (partial)
          Length = 113629

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    aaggccaaagcgtcgtcatggtca 69
             ||||||||| ||||||||||||||
Sbjct: 98145 aaggccaaaacgtcgtcatggtca 98168

>ref|XM_420795.1| PREDICTED: Gallus gallus similar to Cytokine-like protein C17
           precursor (UNQ1942/PRO4425) (LOC422849), mRNA
          Length = 1132

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 agatgctgctgagcctgtt 127
           |||||||||||||||||||
Sbjct: 174 agatgctgctgagcctgtt 192

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 79      tgagcatgctcaacgctgg 97
               |||||||||||||||||||
Sbjct: 1149837 tgagcatgctcaacgctgg 1149855

>emb|CR339058.11| Zebrafish DNA sequence from clone CH211-135H16 in linkage group 23,
             complete sequence
          Length = 110857

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    atgacaggactgagcatgc 87
             |||||||||||||||||||
Sbjct: 88757 atgacaggactgagcatgc 88739

>emb|AL390067.19| Human DNA sequence from clone RP11-276E15 on chromosome 9 Contains the 3'
              end of a novel gene, gene HSPC043, the 5' end of the gene
              for a novel protein similar to sorting nexin 7 (SNX7), a
              novel gene and two CpG islands, complete sequence
          Length = 114178

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 103    ccacccagatgctgctgag 121
              |||||||||||||||||||
Sbjct: 103818 ccacccagatgctgctgag 103836

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 99      ctgaccacccagatgctgc 117
               |||||||||||||||||||
Sbjct: 1882580 ctgaccacccagatgctgc 1882562

>emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in linkage group 23,
              complete sequence
          Length = 167014

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     atgacaggactgagcatgc 87
              |||||||||||||||||||
Sbjct: 152630 atgacaggactgagcatgc 152612

>gb|AC104439.2| Homo sapiens chromosome 3 clone RP11-793E15, complete sequence
          Length = 197279

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 108   cagatgctgctgagcctgt 126
             |||||||||||||||||||
Sbjct: 82779 cagatgctgctgagcctgt 82761

>ref|XM_686027.1| PREDICTED: Danio rerio similar to CG5937-PA (LOC562652), mRNA
          Length = 6573

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 73   caggactgagcatgctcaa 91
            |||||||||||||||||||
Sbjct: 4757 caggactgagcatgctcaa 4739

>emb|BX931297.1| Gallus gallus finished cDNA, clone ChEST657d11
          Length = 1133

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 agatgctgctgagcctgtt 127
           |||||||||||||||||||
Sbjct: 175 agatgctgctgagcctgtt 193

>gb|AC006529.1|AC006529 Homo sapiens clone SCb-20L24 from 7q31, complete sequence
          Length = 178069

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    atggtcatgacaggactga 81
             |||||||||||||||||||
Sbjct: 20205 atggtcatgacaggactga 20187

>gb|AC009181.5|AC009181 Homo sapiens clone RP11-224A1 from 7q31, complete sequence
          Length = 159027

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     atggtcatgacaggactga 81
              |||||||||||||||||||
Sbjct: 142390 atggtcatgacaggactga 142372

>gb|AC157656.3| Mus musculus BAC clone RP23-406A5 from chromosome 13, complete sequence
          Length = 189500

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 91    acgctggtctgaccaccca 109
             |||||||||||||||||||
Sbjct: 88712 acgctggtctgaccaccca 88730

>emb|AL844903.11| Mouse DNA sequence from clone RP23-197C2 on chromosome 2, complete
             sequence
          Length = 123851

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    caggactgagcatgctcaa 91
             |||||||||||||||||||
Sbjct: 59594 caggactgagcatgctcaa 59612


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 744,228
Number of Sequences: 3902068
Number of extensions: 744228
Number of successful extensions: 53824
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53669
Number of HSP's gapped (non-prelim): 155
length of query: 156
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 134
effective length of database: 17,147,199,772
effective search space: 2297724769448
effective search space used: 2297724769448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)