ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3f22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118337 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 118396 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118397 gtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 118456 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118457 aatcgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 118516 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118517 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 118576 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118577 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 118636 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118637 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 118696 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118697 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 118756 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118757 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 118816 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118817 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 118876 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 118877 gcttcggcagatcgctt 118893 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96557 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 96498 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96497 gtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 96438 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96437 aatcgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 96378 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96377 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 96318 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96317 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 96258 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96257 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 96198 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96197 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 96138 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96137 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 96078 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96077 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 96018 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 96017 gcttcggcagatcgctt 96001
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118202 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 118261 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118262 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 118321 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118322 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 118381 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118382 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 118441 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118442 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 118501 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118502 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 118561 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118562 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 118621 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118622 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 118681 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118682 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 118741 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 118742 gcttcggcagatcgctt 118758 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96954 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 96895 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96894 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 96835 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96834 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 96775 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96774 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 96715 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96714 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 96655 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96654 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 96595 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96594 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 96535 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96534 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 96475 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96474 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 96415 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 96414 gcttcggcagatcgctt 96398
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118202 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 118261 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118262 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 118321 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118322 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 118381 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118382 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 118441 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118442 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 118501 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118502 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 118561 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118562 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 118621 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118622 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 118681 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118682 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 118741 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 118742 gcttcggcagatcgctt 118758 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96954 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 96895 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96894 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 96835 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96834 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 96775 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96774 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 96715 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96714 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 96655 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96654 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 96595 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96594 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 96535 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96534 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 96475 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96474 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 96415 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 96414 gcttcggcagatcgctt 96398
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118151 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 118210 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118211 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 118270 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118271 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 118330 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118331 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 118390 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118391 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 118450 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118451 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 118510 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118511 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 118570 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118571 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 118630 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118631 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 118690 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 118691 gcttcggcagatcgctt 118707 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96899 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 96840 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96839 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 96780 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96779 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 96720 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96719 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 96660 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96659 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 96600 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96599 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 96540 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96539 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 96480 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96479 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 96420 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96419 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 96360 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 96359 gcttcggcagatcgctt 96343
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31509532 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 31509473 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509472 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 31509413 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509412 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 31509353 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509352 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 31509293 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509292 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 31509233 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509232 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 31509173 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509172 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 31509113 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509112 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 31509053 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509052 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 31508993 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 31508992 gcttcggcagatcgctt 31508976 Score = 1049 bits (529), Expect = 0.0 Identities = 550/557 (98%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27320018 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 27320077 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320078 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 27320137 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 27320138 aatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcggacctcggc 27320197 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320198 tcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 27320257 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320258 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 27320317 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320318 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 27320377 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 27320378 actcaccctccgtggacgaaccttgtggaggaaaccttgggttttcagggcattggattc 27320437 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320438 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 27320497 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320498 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 27320557 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 27320558 gcttcggcagatcgctt 27320574 Score = 414 bits (209), Expect = e-112 Identities = 209/209 (100%) Strand = Plus / Plus Query: 350 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512918 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11512977 Query: 410 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512978 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 11513037 Query: 470 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513038 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 11513097 Query: 530 tgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||| Sbjct: 11513098 tgacatcccacagcttcggcagatcgctt 11513126
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 83064 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 83123 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83124 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 83183 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83184 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 83243 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83244 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 83303 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83304 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 83363 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83364 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 83423 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83424 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 83483 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83484 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 83543 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83544 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 83603 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 83604 gcttcggcagatcgctt 83620
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123995 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 123936 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123935 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 123876 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123875 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 123816 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123815 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 123756 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123755 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 123696 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123695 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 123636 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123635 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 123576 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123575 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 123516 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123515 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 123456 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 123455 gcttcggcagatcgctt 123439 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 15721 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 15662 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15661 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 15602 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15601 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 15542 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15541 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 15482 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15481 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 15422 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15421 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 15362 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15361 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 15302 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15301 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 15242 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15241 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 15182 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 15181 gcttcggcagatcgctt 15165
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 142529 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 142470 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142469 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 142410 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142409 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 142350 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142349 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 142290 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142289 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 142230 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142229 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 142170 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142169 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 142110 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142109 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 142050 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142049 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 141990 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 141989 gcttcggcagatcgctt 141973
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43161 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 43220 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43221 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 43280 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43281 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 43340 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43341 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 43400 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43401 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 43460 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43461 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 43520 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43521 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 43580 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43581 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 43640 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43641 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 43700 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 43701 gcttcggcagatcgctt 43717 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21956 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 21897 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21896 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 21837 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21836 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 21777 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21776 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 21717 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21716 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 21657 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21656 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 21597 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21596 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 21537 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21536 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 21477 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21476 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 21417 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 21416 gcttcggcagatcgctt 21400
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9269881 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 9269822 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269821 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 9269762 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269761 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 9269702 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269701 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 9269642 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269641 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 9269582 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269581 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 9269522 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269521 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 9269462 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269461 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 9269402 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269401 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 9269342 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 9269341 gcttcggcagatcgctt 9269325 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9229381 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 9229322 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229321 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 9229262 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229261 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 9229202 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229201 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 9229142 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229141 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 9229082 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229081 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 9229022 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229021 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 9228962 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228961 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 9228902 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228901 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 9228842 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 9228841 gcttcggcagatcgctt 9228825 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9165969 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 9165910 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165909 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 9165850 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165849 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 9165790 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165789 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 9165730 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165729 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 9165670 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165669 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 9165610 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165609 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 9165550 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165549 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 9165490 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165489 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 9165430 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 9165429 gcttcggcagatcgctt 9165413 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9057795 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 9057736 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057735 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 9057676 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057675 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 9057616 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057615 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 9057556 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057555 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 9057496 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057495 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 9057436 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057435 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 9057376 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057375 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 9057316 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057315 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 9057256 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 9057255 gcttcggcagatcgctt 9057239 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Minus Query: 82 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 141 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811 Query: 142 catacttcagcgctgcagcgcttggtactcggacctcgg 180 ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772 Score = 99.6 bits (50), Expect = 9e-18 Identities = 56/58 (96%) Strand = Plus / Minus Query: 241 aacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 298 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 5792222 aacctataaccatcttttggctaacctagcctcctccgtccctccgtaccaataaggg 5792165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19939866 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 19939807 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939806 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 19939747 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939746 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 19939687 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939686 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 19939627 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939626 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 19939567 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939566 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 19939507 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939506 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 19939447 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939446 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 19939387 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939386 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 19939327 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 19939326 gcttcggcagatcgctt 19939310 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10275565 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 10275624 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275625 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 10275684 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275685 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 10275744 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275745 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 10275804 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275805 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 10275864 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275865 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 10275924 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275925 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 10275984 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275985 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 10276044 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276045 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 10276104 Query: 542 gcttcggcagatcgctt 558 |||||||||||| |||| Sbjct: 10276105 gcttcggcagattgctt 10276121 Score = 1065 bits (537), Expect = 0.0 Identities = 552/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10388733 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 10388674 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388673 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 10388614 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388613 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 10388554 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388553 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 10388494 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388493 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 10388434 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388433 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 10388374 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388373 actcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 10388314 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388313 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 10388254 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10388253 tcgcggttgcttccctctaaggcggaacgctctcctaccgatgcattttgacatcccaca 10388194 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 10388193 gcttcggcagatcgctt 10388177
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9240400 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 9240459 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240460 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 9240519 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240520 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 9240579 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240580 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 9240639 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240640 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 9240699 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240700 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 9240759 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240760 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 9240819 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240820 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 9240879 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240880 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 9240939 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 9240940 gcttcggcagatcgctt 9240956 Score = 228 bits (115), Expect = 2e-56 Identities = 212/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||||| | Sbjct: 3579640 ctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttcctgaaa 3579699 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| | ||||||||||| | || || ||||| ||||||||||| |||| Sbjct: 3579700 gtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtggtaaagc 3579754 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3579755 aatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggaccttggc 3579814 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3579815 ttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgtccttaa 3579873 Query: 242 acc 244 ||| Sbjct: 3579874 acc 3579876 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 498 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 544 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 3580239 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 3580285 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 344 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaa 395 ||||||||||||||||| | |||| |||| |||||||| |||| |||||||| Sbjct: 22198978 gcctgatcttaggccctaattcactctccatggacgaatcttgtggaggaaa 22199029
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31600048 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 31599989 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599988 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 31599929 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599928 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 31599869 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599868 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 31599809 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599808 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 31599749 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599748 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 31599689 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599688 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 31599629 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599628 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 31599569 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599568 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 31599509 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 31599508 gcttcggcagatcgctt 31599492 Score = 1049 bits (529), Expect = 0.0 Identities = 550/557 (98%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27411341 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 27411400 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411401 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 27411460 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 27411461 aatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcggacctcggc 27411520 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411521 tcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 27411580 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411581 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 27411640 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411641 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 27411700 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 27411701 actcaccctccgtggacgaaccttgtggaggaaaccttgggttttcagggcattggattc 27411760 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411761 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 27411820 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411821 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 27411880 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 27411881 gcttcggcagatcgctt 27411897 Score = 414 bits (209), Expect = e-112 Identities = 209/209 (100%) Strand = Plus / Plus Query: 350 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509681 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11509740 Query: 410 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509741 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 11509800 Query: 470 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509801 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 11509860 Query: 530 tgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||| Sbjct: 11509861 tgacatcccacagcttcggcagatcgctt 11509889
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 46177 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 46236 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46237 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 46296 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46297 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 46356 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46357 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 46416 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46417 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 46476 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46477 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 46536 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46537 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 46596 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46597 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 46656 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46657 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 46716 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 46717 gcttcggcagatcgctt 46733
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122001 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 122060 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122061 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 122120 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122121 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 122180 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122181 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 122240 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122241 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 122300 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122301 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 122360 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122361 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 122420 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122421 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 122480 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122481 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 122540 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 122541 gcttcggcagatcgctt 122557 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100836 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 100777 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100776 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 100717 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100716 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 100657 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100656 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 100597 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100596 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 100537 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100536 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 100477 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100476 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 100417 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100416 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 100357 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100356 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 100297 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 100296 gcttcggcagatcgctt 100280
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51613 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 51672 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51673 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 51732 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51733 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 51792 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51793 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 51852 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51853 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 51912 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51913 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 51972 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51973 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 52032 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52033 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 52092 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52093 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 52152 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 52153 gcttcggcagatcgctt 52169
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 803 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 744 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 684 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 624 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 564 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 504 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 444 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 384 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 324 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 264 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 263 gcttcggcagatcgctt 247
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1528 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 1469 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1468 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 1409 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1408 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 1349 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1348 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 1289 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1288 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 1229 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1228 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 1169 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 1109 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 1049 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 989 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 988 gcttcggcagatcgctt 972
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1399 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 1340 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1339 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 1280 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1279 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 1220 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1219 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 1160 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1159 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 1100 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1099 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 1040 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 980 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 979 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 920 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 919 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 860 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 859 gcttcggcagatcgctt 843
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1528 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 1469 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1468 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 1409 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1408 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 1349 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1348 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 1289 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1288 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 1229 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1228 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 1169 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 1109 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 1049 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 989 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 988 gcttcggcagatcgctt 972
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19951142 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 19951083 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951082 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 19951023 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951022 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 19950963 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950962 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 19950903 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950902 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 19950843 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950842 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 19950783 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950782 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 19950723 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950722 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 19950663 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950662 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 19950603 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 19950602 gcttcggcagatcgctt 19950586 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10281604 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 10281663 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281664 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 10281723 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281724 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 10281783 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281784 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 10281843 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281844 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 10281903 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281904 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 10281963 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281964 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 10282023 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282024 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 10282083 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282084 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 10282143 Query: 542 gcttcggcagatcgctt 558 |||||||||||| |||| Sbjct: 10282144 gcttcggcagattgctt 10282160 Score = 1065 bits (537), Expect = 0.0 Identities = 552/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10394772 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 10394713 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394712 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 10394653 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394652 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 10394593 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394592 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 10394533 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394532 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 10394473 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394472 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 10394413 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394412 actcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 10394353 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394352 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 10394293 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10394292 tcgcggttgcttccctctaaggcggaacgctctcctaccgatgcattttgacatcccaca 10394233 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 10394232 gcttcggcagatcgctt 10394216
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122718 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 122777 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122778 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 122837 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122838 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 122897 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122898 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 122957 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122958 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 123017 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123018 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 123077 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123078 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 123137 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123138 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 123197 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123198 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 123257 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 123258 gcttcggcagatcgctt 123274 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101513 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 101454 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101453 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 101394 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101393 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 101334 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101333 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 101274 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101273 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 101214 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101213 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 101154 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101153 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 101094 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101093 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 101034 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101033 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 100974 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 100973 gcttcggcagatcgctt 100957
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118145 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 118204 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118205 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 118264 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118265 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 118324 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118325 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 118384 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118385 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 118444 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118445 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 118504 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118505 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 118564 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118565 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 118624 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118625 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 118684 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 118685 gcttcggcagatcgctt 118701 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96894 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 96835 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96834 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 96775 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96774 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 96715 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96714 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 96655 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96654 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 96595 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96594 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 96535 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96534 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 96475 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96474 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 96415 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96414 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 96355 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 96354 gcttcggcagatcgctt 96338
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 117118 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 117177 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117178 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 117237 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117238 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 117297 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117298 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 117357 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117358 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 117417 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117418 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 117477 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117478 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 117537 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117538 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 117597 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117598 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 117657 Query: 542 gcttcggcagatcgctt 558 |||||||||||| |||| Sbjct: 117658 gcttcggcagattgctt 117674
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 56890 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 56949 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56950 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 57009 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57010 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 57069 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57070 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 57129 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57130 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 57189 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57190 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 57249 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57250 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 57309 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57310 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 57369 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57370 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 57429 Query: 542 gcttcggcagatcgctt 558 |||||||||||| |||| Sbjct: 57430 gcttcggcagattgctt 57446
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 607 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 548 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 488 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 428 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 368 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 308 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 307 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcctaggccctg 248 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 188 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 128 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 68 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 67 gcttcggcagatcgctt 51
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 672 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 613 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 553 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 493 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 433 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 373 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gtacaggaatattgacccgttgtccatcgactacgcctttcggcctgatcttaggccctg 313 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 253 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 193 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 133 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 132 gcttcggcagatcgctt 116
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 616 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 557 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 497 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 437 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 377 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 317 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 316 gtacaggaatattgacctgttgtccgtcgactacgcctttcggcctgatcttaggccctg 257 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 197 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 137 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 77 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 76 gcttcggcagatcgctt 60
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1151 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 1092 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 1032 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 972 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 912 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 852 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 792 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 732 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 731 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcaacccccgctt 672 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 612 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 611 gcttcggcagatcgctt 595
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1065 bits (537), Expect = 0.0 Identities = 553/557 (99%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118172 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 118231 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 118232 gtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcctcgtggagaagc 118290 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118291 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 118350 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118351 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 118410 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118411 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 118470 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118471 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 118530 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118531 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 118590 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118591 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 118650 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118651 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 118710 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 118711 gcttcggcagatcgctt 118727 Score = 1065 bits (537), Expect = 0.0 Identities = 553/557 (99%), Gaps = 1/557 (0%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96946 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 96887 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 96886 gtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcctcgtggagaagc 96828 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96827 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 96768 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96767 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 96708 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96707 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 96648 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96647 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 96588 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96587 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 96528 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96527 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 96468 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96467 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 96408 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 96407 gcttcggcagatcgctt 96391
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1065 bits (537), Expect = 0.0 Identities = 552/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95125 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 95066 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95065 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 95006 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95005 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 94946 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94945 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 94886 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94885 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 94826 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94825 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 94766 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94765 actcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 94706 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94705 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 94646 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 94645 tcgcggttgcttccctctaaggcggaacgctctcctaccgatgcattttgacatcccaca 94586 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 94585 gcttcggcagatcgctt 94569
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1065 bits (537), Expect = 0.0 Identities = 552/557 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 29189 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 29130 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29129 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 29070 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29069 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 29010 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29009 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 28950 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28949 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 28890 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28889 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 28830 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28829 actcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 28770 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28769 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 28710 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 28709 tcgcggttgcttccctctaaggcggaacgctctcctaccgatgcattttgacatcccaca 28650 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 28649 gcttcggcagatcgctt 28633
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 1049 bits (529), Expect = 0.0 Identities = 550/557 (98%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 20225 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 20284 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20285 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 20344 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 20345 aatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcggacctcggc 20404 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20405 tcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 20464 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20465 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 20524 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20525 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 20584 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 20585 actcaccctccgtggacgaaccttgtggaggaaaccttgggttttcagggcattggattc 20644 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20645 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 20704 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20705 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 20764 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 20765 gcttcggcagatcgctt 20781
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1033 bits (521), Expect = 0.0 Identities = 549/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121944 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 122003 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122004 gtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggagaagc 122062 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122063 aatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacctcggc 122122 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122123 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 122182 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122183 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 122242 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122243 gtacaggaatattgacctgttgtccatcgacttagcctttcggcctgatcttaggccctg 122302 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122303 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 122362 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122363 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 122422 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122423 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 122482 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 122483 gcttcggcagatcgctt 122499 Score = 1033 bits (521), Expect = 0.0 Identities = 549/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100793 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 100734 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 100733 gtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggagaagc 100675 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 100674 aatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacctcggc 100615 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100614 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 100555 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100554 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 100495 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 100494 gtacaggaatattgacctgttgtccatcgacttagcctttcggcctgatcttaggccctg 100435 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100434 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 100375 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100374 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 100315 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100314 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 100255 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 100254 gcttcggcagatcgctt 100238
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1033 bits (521), Expect = 0.0 Identities = 549/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7146 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 7087 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 7086 gtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggagaagc 7028 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 7027 aatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacctcggc 6968 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6967 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 6908 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6907 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 6848 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6847 gtacaggaatattgacctgttgtccatcgacttagcctttcggcctgatcttaggccctg 6788 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6787 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 6728 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6727 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 6668 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6667 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 6608 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 6607 gcttcggcagatcgctt 6591
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1033 bits (521), Expect = 0.0 Identities = 549/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1734 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 1675 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1674 gtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgtggagaagc 1616 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1615 aatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcggacctcggc 1556 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1555 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 1496 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1495 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 1436 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1435 gtacaggaatattgacctgttgtccatcgacttagcctttcggcctgatcttaggccctg 1376 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1375 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 1316 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 1256 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1255 tcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 1196 Query: 542 gcttcggcagatcgctt 558 ||||||||||||||||| Sbjct: 1195 gcttcggcagatcgctt 1179
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 866 bits (437), Expect = 0.0 Identities = 458/465 (98%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5634084 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 5634143 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 5634144 gtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgtcgagaagc 5634203 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634204 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 5634263 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5634264 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgtccttaa 5634323 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634324 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 5634383 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5634384 gtacaggaatattgacctgttgtccatcgactacgcctttcgacctgatcttaggccctg 5634443 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634444 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 5634503 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634504 tcaccaatgttttcgttactcaagccgacattctcgcttccgctt 5634548 Score = 188 bits (95), Expect = 1e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 134 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13417146 Query: 194 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 236 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13417147 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13417189
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 866 bits (437), Expect = 0.0 Identities = 458/465 (98%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5634073 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 5634132 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 5634133 gtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgtcgagaagc 5634192 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634193 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 5634252 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5634253 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgtccttaa 5634312 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634313 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 5634372 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5634373 gtacaggaatattgacctgttgtccatcgactacgcctttcgacctgatcttaggccctg 5634432 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634433 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 5634492 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634493 tcaccaatgttttcgttactcaagccgacattctcgcttccgctt 5634537 Score = 188 bits (95), Expect = 1e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 134 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13371420 Query: 194 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 236 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13371421 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13371463
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 866 bits (437), Expect = 0.0 Identities = 458/465 (98%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 18801 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 18742 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 18741 gtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgtcgagaagc 18682 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18681 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 18622 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 18621 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgtccttaa 18562 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18561 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 18502 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 18501 gtacaggaatattgacctgttgtccatcgactacgcctttcgacctgatcttaggccctg 18442 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18441 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 18382 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18381 tcaccaatgttttcgttactcaagccgacattctcgcttccgctt 18337
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 795 bits (401), Expect = 0.0 Identities = 404/405 (99%) Strand = Plus / Plus Query: 154 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 60 Query: 214 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 120 Query: 274 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 180 Query: 334 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 240 Query: 394 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacatt 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacatt 300 Query: 454 ctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctc 513 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301 ctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcggaacgctc 360 Query: 514 ccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ccctaccgatgcattttgacatcccacagcttcggcagatcgctt 405
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 779 bits (393), Expect = 0.0 Identities = 396/397 (99%) Strand = Plus / Minus Query: 162 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 221 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 cttgttactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1114 Query: 222 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1054 Query: 282 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 994 Query: 342 cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 934 Query: 402 gttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttc 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 gttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttc 874 Query: 462 cgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccg 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 cgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccg 814 Query: 522 atgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||| Sbjct: 813 atgcattttgacatcccacagcttcggcagatcgctt 777
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 743 bits (375), Expect = 0.0 Identities = 384/387 (99%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 387 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 328 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 268 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 208 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 148 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 88 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 28 Query: 362 actcaccctccgtggacgaaccttgcg 388 ||||||||||||||||||||||||||| Sbjct: 27 actcaccctccgtggacgaaccttgcg 1
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 680 bits (343), Expect = 0.0 Identities = 346/347 (99%) Strand = Plus / Plus Query: 212 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 60 Query: 272 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 120 Query: 332 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 180 Query: 392 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 240 Query: 452 ttctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgc 511 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 ttctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcggaacgc 300 Query: 512 tcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 347
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 656 bits (331), Expect = 0.0 Identities = 394/415 (94%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 126343 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| Sbjct: 126344 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 126403 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 126404 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 126463 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126464 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 126523 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 126524 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 126583 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || || |||| ||||| ||||||||||||||| Sbjct: 126584 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttccctctaagg 126643 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126644 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 126698 Score = 656 bits (331), Expect = 0.0 Identities = 394/415 (94%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 108579 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| Sbjct: 108578 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 108519 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 108518 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 108459 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108458 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 108399 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 108398 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 108339 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || || |||| ||||| ||||||||||||||| Sbjct: 108338 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttccctctaagg 108279 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108278 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 108224 Score = 137 bits (69), Expect = 4e-29 Identities = 94/102 (92%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 126211 ctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttttcctgaga 126270 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||| ||| ||| ||||||||||||||||||||||||| Sbjct: 126271 gtatgacatgggt----tacttcagcgccgtagcgcctggta 126308 Score = 137 bits (69), Expect = 4e-29 Identities = 94/102 (92%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 108711 ctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttttcctgaga 108652 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||| ||| ||| ||||||||||||||||||||||||| Sbjct: 108651 gtatgacatgggt----tacttcagcgccgtagcgcctggta 108614
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 648 bits (327), Expect = 0.0 Identities = 393/415 (94%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 132376 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 132435 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 132436 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 132495 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 132496 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132555 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132556 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132615 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132616 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 132675 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 132676 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 132735 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132736 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 132790 Score = 648 bits (327), Expect = 0.0 Identities = 393/415 (94%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 106273 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 106214 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 106213 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 106154 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 106153 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 106094 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106093 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106034 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106033 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105974 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 105973 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 105914 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105913 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 105859 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132303 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 132362 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||| |||| ||| ||||||||||||||||||||||||| Sbjct: 132363 gtatagcatgggt----tacttcagcgccgtagcgcctggta 132400 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106346 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 106287 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||| |||| ||| ||||||||||||||||||||||||| Sbjct: 106286 gtatagcatgggt----tacttcagcgccgtagcgcctggta 106249
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 137921 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 137980 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 137981 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138040 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138041 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138100 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138101 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138160 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138161 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 138220 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || |||||| ||||| |||||||| |||||| Sbjct: 138221 agccgacattctcgcttccgcttcgtctactcccgctcacgcgggtgcttccccctaagg 138280 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138281 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 138335 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111176 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111117 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 111116 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111057 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111056 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110997 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110996 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110937 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110936 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 110877 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || |||||| ||||| |||||||| |||||| Sbjct: 110876 agccgacattctcgcttccgcttcgtctactcccgctcacgcgggtgcttccccctaagg 110817 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110816 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 110762 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137848 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 137907 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||| |||| ||| ||||||||||||||||||||||||| Sbjct: 137908 gtatagcatgggt----tacttcagcgccgtagcgcctggta 137945 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111249 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 111190 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||| |||| ||| ||||||||||||||||||||||||| Sbjct: 111189 gtatagcatgggt----tacttcagcgccgtagcgcctggta 111152
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 131415 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 131474 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||| ||||||| || ||| |||| |||||||||||||||||| Sbjct: 131475 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 131534 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131535 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131594 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131595 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131654 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131655 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 131714 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 131715 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 131774 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131775 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 131829 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 105349 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 105290 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||| ||||||| || ||| |||| |||||||||||||||||| Sbjct: 105289 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 105230 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105229 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105170 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105169 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105110 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105109 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105050 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 105049 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 104990 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104989 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 104935 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131342 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 131401 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||| |||| ||| ||||||||||||||||||||||||| Sbjct: 131402 gtatagcatgggt----tacttcagcgccgtagcgcctggta 131439 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105422 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 105363 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||| |||| ||| ||||||||||||||||||||||||| Sbjct: 105362 gtatagcatgggt----tacttcagcgccgtagcgcctggta 105325
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 132699 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 132700 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 132759 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 132760 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132819 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132820 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132879 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 132939 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || || |||| ||||| |||||| |||||||| Sbjct: 132940 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttctctctaagg 132999 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133000 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 133054 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 105272 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105271 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105212 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105211 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105152 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105151 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105092 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105091 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105032 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || || |||| ||||| |||||| |||||||| Sbjct: 105031 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttctctctaagg 104972 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104971 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 104917 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 132567 ctgtgtcggtttcgggtacaggtacccttttgttaaaggtcgttcgagcttttcctggga 132626 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 132627 gtatggcatgggt----tacttcagcgccgtagcgcctggta 132664 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 105404 ctgtgtcggtttcgggtacaggtacccttttgttaaaggtcgttcgagcttttcctggga 105345 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 105344 gtatggcatgggt----tacttcagcgccgtagcgcctggta 105307
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 138126 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 138185 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 138186 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138245 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138246 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138305 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138306 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138365 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138366 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 138425 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 138426 agccgacattctcgcttccgcttcgtccacccctgctctcgcgggtgcttccctctaagg 138485 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 138486 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 138540 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111173 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111114 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 111113 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111054 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111053 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110994 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110993 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110934 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110933 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110874 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 110873 agccgacattctcgcttccgcttcgtccacccctgctctcgcgggtgcttccctctaagg 110814 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 110813 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 110759 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138053 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 138112 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138113 gtatggcatgggt----tacttcagcgccgtagcgcctggta 138150 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111246 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 111187 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111186 gtatggcatgggt----tacttcagcgccgtagcgcctggta 111149
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 640 bits (323), Expect = e-180 Identities = 392/415 (94%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||| | ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1218 tacttcagcgccgtagcacctggtactcgaacattggctcggggcattttctctacccct 1159 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1158 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1099 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 1098 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1039 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 979 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 978 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 919 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| Sbjct: 918 agccgacattctcgcttccgcttcgtccacccccgctctcgcgggtgcttccctctaagg 859 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 858 cggaacgctcccctaccgatgcatttttacatcccgcagcttcggcagatcgctt 804 Score = 101 bits (51), Expect = 2e-18 Identities = 89/102 (87%), Gaps = 11/102 (10%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1284 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc-------ggga 1232 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 1231 gtatggcatgggt----tacttcagcgccgtagcacctggta 1194
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131192 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131251 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 131252 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131311 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131312 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131371 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131372 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131431 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131432 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131491 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 131492 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 131551 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 131552 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 131606 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105686 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105627 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105626 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105567 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105566 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105507 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105506 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105447 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105446 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105387 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 105386 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 105327 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 105326 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 105272 Score = 168 bits (85), Expect = 1e-38 Identities = 98/102 (96%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131119 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 131178 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 131179 gtatggcatcggt----tacttcagcgccgtagcgcctggta 131216 Score = 168 bits (85), Expect = 1e-38 Identities = 98/102 (96%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105759 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 105700 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 105699 gtatggcatcggt----tacttcagcgccgtagcgcctggta 105662
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130084 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130143 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 130144 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 130203 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 130204 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130263 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130264 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130323 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130324 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130383 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 130384 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 130443 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 130444 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 130498 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 104551 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 104492 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 104491 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 104432 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 104431 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 104372 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104371 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104312 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104311 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 104252 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 104251 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 104192 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 104191 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 104137 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 130011 ctgtgtcggtttcgggtacaggtacccttttgttgaaggccgttcgagcttttcctggga 130070 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 130071 gtatggcatgggt----tacttcagcgccgtagcgcctggta 130108 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104624 ctgtgtcggtttcgggtacaggtacccttttgttgaaggccgttcgagcttttcctggga 104565 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 104564 gtatggcatgggt----tacttcagcgccgtagcgcctggta 104527
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 141355 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 141356 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 141415 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 141416 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 141475 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141476 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 141535 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141536 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 141595 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 141596 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 141655 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 141656 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 141710 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 111973 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 111972 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 111913 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 111912 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 111853 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111852 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111793 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111792 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 111733 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 111732 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 111673 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 111672 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 111618 Score = 145 bits (73), Expect = 2e-31 Identities = 95/102 (93%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141223 ctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttttcctggga 141282 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 141283 gtatggcatgggt----tacttcagcgccgtagcgcttggta 141320 Score = 145 bits (73), Expect = 2e-31 Identities = 95/102 (93%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 112105 ctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttttcctggga 112046 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 112045 gtatggcatgggt----tacttcagcgccgtagcgcttggta 112008
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 135009 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 135068 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 135069 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 135128 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 135129 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 135188 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135189 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135248 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135249 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135308 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 135309 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtacttccctctaagg 135368 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 135369 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 135423 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 107416 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 107357 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 107356 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 107297 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107296 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107237 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107236 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107177 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107176 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107117 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 107116 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtacttccctctaagg 107057 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 107056 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 107002 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134936 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 134995 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||| | ||| ||||||||||||||||||||||||| Sbjct: 134996 gtatggcgtgggt----tacttcagcgccgtagcgcctggta 135033 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107489 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 107430 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||| | ||| ||||||||||||||||||||||||| Sbjct: 107429 gtatggcgtgggt----tacttcagcgccgtagcgcctggta 107392
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131185 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131244 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 131245 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131304 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131305 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131364 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131365 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131424 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131425 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131484 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 131485 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 131544 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 131545 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 131599 Score = 624 bits (315), Expect = e-176 Identities = 390/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105684 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105625 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105624 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105565 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105564 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105505 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105504 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105445 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105444 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105385 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 105384 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 105325 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 105324 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 105270 Score = 168 bits (85), Expect = 1e-38 Identities = 98/102 (96%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131112 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 131171 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 131172 gtatggcatcggt----tacttcagcgccgtagcgcctggta 131209 Score = 168 bits (85), Expect = 1e-38 Identities = 98/102 (96%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105757 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 105698 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 105697 gtatggcatcggt----tacttcagcgccgtagcgcctggta 105660
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 618 bits (312), Expect = e-174 Identities = 391/416 (93%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 138055 Query: 204 tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 262 ||||||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||||| Sbjct: 138056 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 138115 Query: 263 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 322 |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 138116 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 138175 Query: 323 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138176 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 138235 Query: 383 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 442 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138236 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 138295 Query: 443 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 502 |||||||||||||||||||||||||||| || || ||| ||||| |||||| ||||||| Sbjct: 138296 aagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactctaag 138355 Query: 503 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138356 gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 138411 Score = 618 bits (312), Expect = e-174 Identities = 391/416 (93%), Gaps = 1/416 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 111890 Query: 204 tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 262 ||||||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||||| Sbjct: 111889 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 111830 Query: 263 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 322 |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 111829 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 111770 Query: 323 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111769 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 111710 Query: 383 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 442 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111709 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 111650 Query: 443 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 502 |||||||||||||||||||||||||||| || || ||| ||||| |||||| ||||||| Sbjct: 111649 aagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactctaag 111590 Query: 503 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111589 gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 111534 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137923 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 137982 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 137983 gtatggcatgggt----tacttcagcgccgtagcgcctggta 138020 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112022 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 111963 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111962 gtatggcatgggt----tacttcagcgccgtagcgcctggta 111925 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 aggccctgactcaccctccgtgga 377 |||||||||||||||||||||||| Sbjct: 144304 aggccctgactcaccctccgtgga 144327 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 354 aggccctgactcaccctccgtgga 377 |||||||||||||||||||||||| Sbjct: 105641 aggccctgactcaccctccgtgga 105618
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 617 bits (311), Expect = e-173 Identities = 390/415 (93%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 534 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 475 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||| |||| || |||||| |||| |||||||||||||||||| Sbjct: 474 tcttaccctgaaaaaacagggacaccgtgcgtccttgaaccgataaccatctttcggcta 415 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 414 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcgcctgttg 355 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 295 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 294 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 235 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| | Sbjct: 234 agccgacattctcgcttccgcttcgtccacccccgctcgcgcgggtgcttccctctaa-g 176 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 175 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 121 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 548 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 547 gtatggcatgggt----tacttcagcgccgtagcgcctggta 510
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 617 bits (311), Expect = e-173 Identities = 389/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1582 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 1523 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 | |||||||||| | | ||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1522 ttttaccctgaacacaccgggacaccttgcgtccttgaaccgataaccatctttcggcta 1463 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 1462 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1403 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1343 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1342 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 1283 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 1282 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 1223 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 1168 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1655 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 1596 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||| |||| ||| ||||||||||||||||||||||||| Sbjct: 1595 gtatagcatgggt----tacttcagcgccgtagcgcctggta 1558
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 609 bits (307), Expect = e-171 Identities = 388/415 (93%), Gaps = 5/415 (1%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggacattggctcgaggcattttctctacccct 87781 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 87780 tcttaccctgaaa-----gggtcaccttgcgtccttgaaccgataaccatctttcggcta 87726 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 87725 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 87666 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87665 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 87606 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 87605 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 87546 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || || ||| ||| | |||||| |||| ||| Sbjct: 87545 agccgacattctcgcttccgcttcgtccacacctgctcgcgccggtgcttctctctgagg 87486 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 87485 cggaacgctcccctaccgatgtattttgacatcccacagcttcggcagatcgctt 87431 Score = 137 bits (69), Expect = 4e-29 Identities = 94/102 (92%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87913 ctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttttcctggga 87854 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||| ||||||| ||||| Sbjct: 87853 gtatggcatgggt----tacttcagcgctgtagcgcttggta 87816
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 601 bits (303), Expect = e-168 Identities = 387/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||| ||||||||||||||| Sbjct: 1584 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacccct 1525 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1524 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1465 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 1464 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1405 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1404 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1345 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1344 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1285 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| | ||| ||| | |||||||| |||||| Sbjct: 1284 agccgacattctcgcttccgcttcgtctaccgctgctcgcgcaggtgcttccccctaagg 1225 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 1224 cggaacgctcccctaccgatgcctttttacatcccacagcttcggcagatcgctt 1170 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1657 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 1598 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 1597 gtatggcatgggt----tacttcagcgccgtagcgcctggta 1560
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 599 bits (302), Expect = e-168 Identities = 387/415 (93%), Gaps = 4/415 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggacattggctcgaggcattttctctacccct 89869 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||| |||| |||||| |||||| |||| |||||||||||||||||| Sbjct: 89868 tcttaccctgaaaa----gggtaaccttgcgtccttgaaccgataaccatctttcggcta 89813 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 89812 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 89753 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89752 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 89693 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 89692 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 89633 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || || ||| ||| | ||||||||||| ||| Sbjct: 89632 agccgacattctcgcttccgcttcgtccacacctgctcgcgccggtgcttccctctgagg 89573 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 89572 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 89518 Score = 143 bits (72), Expect = 7e-31 Identities = 75/76 (98%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90001 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 89942 Query: 62 gtatggcatcggttac 77 ||||||||| |||||| Sbjct: 89941 gtatggcatgggttac 89926
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134318 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134377 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 134378 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134437 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 134438 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134497 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134498 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134557 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134558 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134617 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 134618 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 134677 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134678 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 134732 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107588 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107529 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 107528 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107469 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107468 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107409 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107408 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107349 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107348 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107289 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 107288 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 107229 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107228 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 107174 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134245 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 134304 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134305 gtatggcatgggt----tacttcagcgccgtagcgcctggta 134342 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107661 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 107602 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 107601 gtatggcatgggt----tacttcagcgccgtagcgcctggta 107564
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134597 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134656 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 134657 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134716 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 134717 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134776 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134777 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134836 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134837 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134896 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 134897 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 134956 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134957 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 135011 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107810 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107751 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 107750 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107691 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107690 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107631 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107630 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107571 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107570 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107511 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 107510 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 107451 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107450 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 107396 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134524 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 134583 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134584 gtatggcatgggt----tacttcagcgccgtagcgcctggta 134621 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107883 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 107824 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 107823 gtatggcatgggt----tacttcagcgccgtagcgcctggta 107786
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 128947 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 129006 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 129007 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 129066 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 129067 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 129126 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129127 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 129186 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 129187 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 129246 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||||||| Sbjct: 129247 agccgacattctcgcttccgcttcgtccaccactgctcgcgcgggtacttccctctaagg 129306 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 129307 cggaacgctcccctaccgattcatttttacatcccacagcttcggcagatcgctt 129361 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 103509 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 103450 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 103449 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 103390 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 103389 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103330 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103329 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 103270 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 103269 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 103210 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||||||| Sbjct: 103209 agccgacattctcgcttccgcttcgtccaccactgctcgcgcgggtacttccctctaagg 103150 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 103149 cggaacgctcccctaccgattcatttttacatcccacagcttcggcagatcgctt 103095 Score = 147 bits (74), Expect = 5e-32 Identities = 97/103 (94%), Gaps = 5/103 (4%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgagcttttcctggg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 128873 ctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgagcttttcctggg 128932 Query: 61 agtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 128933 agtatggcatgggt----tacttcagcgccgtagcgcctggta 128971 Score = 147 bits (74), Expect = 5e-32 Identities = 97/103 (94%), Gaps = 5/103 (4%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgagcttttcctggg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103583 ctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgagcttttcctggg 103524 Query: 61 agtatggcatcggttacatacttcagcgccgtagcgcctggta 103 |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 103523 agtatggcatgggt----tacttcagcgccgtagcgcctggta 103485
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134446 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134505 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134506 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134565 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134566 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134625 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134626 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134685 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134686 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134745 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134746 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134805 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 134806 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 134860 Score = 593 bits (299), Expect = e-166 Identities = 386/415 (93%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107692 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107633 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107632 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107573 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107572 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107513 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107512 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107453 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107452 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107393 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107392 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107333 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 107332 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 107278 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 134373 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 134432 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134433 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 134471 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107765 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 107706 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107705 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107667
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134717 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134776 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134777 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134836 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134837 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134896 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134897 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134956 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134957 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135016 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 135017 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 135076 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 135077 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 135131 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107913 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107854 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107853 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107794 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107793 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107734 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107733 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107674 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107673 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107614 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107613 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107554 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 107553 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 107499 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 134644 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 134703 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134704 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 134742 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107986 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 107927 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107926 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107888
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 585 bits (295), Expect = e-164 Identities = 392/424 (92%), Gaps = 9/424 (2%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 138775 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 138834 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 138835 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 138894 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138895 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138954 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138955 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 139014 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139015 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 139074 Query: 444 agccgacattctcgcttccgcttcgtc--gacccccgctttcgcggttgcttccctctaa 501 ||||||||||||||||||||||||||| || || ||| ||||| ||||||||||||| Sbjct: 139075 agccgacattctcgcttccgcttcgtccacacgcctgctcgcgcgggtgcttccctctaa 139134 Query: 502 ggcggaacgctcccctaccgatgca-------ttttgacatcccacagcttcggcagatc 554 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 139135 ggcggaacgctcccctaccgatgcatttttactttttacatcccacagcttcggcagatc 139194 Query: 555 gctt 558 |||| Sbjct: 139195 gctt 139198 Score = 585 bits (295), Expect = e-164 Identities = 392/424 (92%), Gaps = 9/424 (2%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 111285 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 111226 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 111225 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 111166 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111165 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 111106 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111105 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111046 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111045 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110986 Query: 444 agccgacattctcgcttccgcttcgtc--gacccccgctttcgcggttgcttccctctaa 501 ||||||||||||||||||||||||||| || || ||| ||||| ||||||||||||| Sbjct: 110985 agccgacattctcgcttccgcttcgtccacacgcctgctcgcgcgggtgcttccctctaa 110926 Query: 502 ggcggaacgctcccctaccgatgca-------ttttgacatcccacagcttcggcagatc 554 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 110925 ggcggaacgctcccctaccgatgcatttttactttttacatcccacagcttcggcagatc 110866 Query: 555 gctt 558 |||| Sbjct: 110865 gctt 110862 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138702 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 138761 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138762 gtatggcatgggt----tacttcagcgccgtagcgcctggta 138799 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111358 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 111299 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111298 gtatggcatgggt----tacttcagcgccgtagcgcctggta 111261
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 585 bits (295), Expect = e-164 Identities = 390/420 (92%), Gaps = 5/420 (1%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 140578 Query: 204 tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 258 ||||||||||||||| ||| |||||||||| |||||| |||| |||| ||| ||||| Sbjct: 140579 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 140638 Query: 259 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 318 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 140639 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 140698 Query: 319 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140699 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 140758 Query: 379 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 438 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 140759 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 140818 Query: 439 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 498 |||||||||||||||||||||||||||||||| || || ||| ||||| |||||| ||| Sbjct: 140819 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactc 140878 Query: 499 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140879 taaggcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 140938 Score = 585 bits (295), Expect = e-164 Identities = 390/420 (92%), Gaps = 5/420 (1%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 113079 Query: 204 tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 258 ||||||||||||||| ||| |||||||||| |||||| |||| |||| ||| ||||| Sbjct: 113078 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 113019 Query: 259 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 318 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 113018 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 112959 Query: 319 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112958 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 112899 Query: 379 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 438 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 112898 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 112839 Query: 439 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 498 |||||||||||||||||||||||||||||||| || || ||| ||||| |||||| ||| Sbjct: 112838 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactc 112779 Query: 499 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112778 taaggcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 112719 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140446 ctgtgttggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 140505 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 140506 gtatggcatgggt----tacttcagcgccgtagcgcctggta 140543 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113211 ctgtgttggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 113152 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 113151 gtatggcatgggt----tacttcagcgccgtagcgcctggta 113114
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 135355 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 135414 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 135415 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 135474 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 135475 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 135534 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135594 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135595 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135654 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| || ||||| Sbjct: 135655 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctataagg 135714 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 135715 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 135769 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 108202 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 108143 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 108142 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 108083 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 108082 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 108023 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108022 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107963 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107962 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107903 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| || ||||| Sbjct: 107902 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctataagg 107843 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 107842 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 107788 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 135282 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 135341 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135342 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 135380 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 108275 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 108216 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 108215 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 108177
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3107 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3048 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 3047 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 2988 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 2987 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 2928 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2927 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 2868 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2867 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 2808 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 2807 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 2748 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 2747 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 2693 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 3180 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 3121 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 3120 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 3082
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133963 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134022 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134023 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134082 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134083 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134142 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134143 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134202 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134203 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134262 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134263 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134322 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 134323 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 134377 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107073 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107014 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107013 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106954 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 106953 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106894 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106893 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106834 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106833 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106774 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106773 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106714 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 106713 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 106659 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 133890 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 133949 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133950 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 133988 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107146 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 107087 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107086 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107048
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3352 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3293 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 3292 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 3233 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 3232 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 3173 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3172 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 3113 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3112 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 3053 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 3052 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 2993 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 2992 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 2938 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 3425 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 3366 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 3365 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 3327
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134098 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134157 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134158 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134217 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134218 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134277 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134278 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134337 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134338 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134397 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134398 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134457 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 134458 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 134512 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107245 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107186 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107185 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107126 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107125 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107066 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107065 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107006 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107005 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106946 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106945 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106886 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 106885 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 106831 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 134025 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 134084 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134085 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 134123 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107318 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 107259 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107258 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107220
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134096 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134155 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134156 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134215 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134216 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134275 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134276 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134335 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134336 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134395 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134396 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134455 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 134456 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 134510 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107242 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107183 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107182 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107123 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107122 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107063 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107062 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107003 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107002 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106943 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106942 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106883 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 106882 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 106828 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 134023 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 134082 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134083 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 134121 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107315 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 107256 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107255 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107217
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134008 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134067 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134068 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134127 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134128 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134187 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134188 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134247 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134248 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134307 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134308 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134367 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 134368 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 134422 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107120 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107061 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107060 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107001 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107000 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106941 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106940 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106881 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106821 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106820 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106761 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 106760 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 106706 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 133935 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 133994 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133995 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 134033 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107193 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 107134 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107133 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107095
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130284 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 130343 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 | ||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 130344 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 130403 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 130404 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 130463 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130464 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130523 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 130524 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 130583 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| | | | ||| ||||| | ||||||||||||| Sbjct: 130584 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccctctaagg 130643 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||| | |||| ||||||||||||||||||||||||||| Sbjct: 130644 cggaacgctcccctaccgattcttttttacatcccacagcttcggcagatcgctt 130698 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105110 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 105051 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 | ||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 105050 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 104991 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 104990 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 104931 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104930 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104871 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 104870 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 104811 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| | | | ||| ||||| | ||||||||||||| Sbjct: 104810 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccctctaagg 104751 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||| | |||| ||||||||||||||||||||||||||| Sbjct: 104750 cggaacgctcccctaccgattcttttttacatcccacagcttcggcagatcgctt 104696 Score = 137 bits (69), Expect = 4e-29 Identities = 94/102 (92%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130211 ctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttttcctggga 130270 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| | | ||||||||||| ||||||||||||| Sbjct: 130271 gtatggcatggat----tacttcagcgctgtagcgcctggta 130308 Score = 137 bits (69), Expect = 4e-29 Identities = 94/102 (92%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105183 ctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttttcctggga 105124 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| | | ||||||||||| ||||||||||||| Sbjct: 105123 gtatggcatggat----tacttcagcgctgtagcgcctggta 105086
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134715 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134774 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134775 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134834 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134835 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134894 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134895 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134954 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134955 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135014 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 135015 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 135074 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 135075 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 135129 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107911 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107852 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107851 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107792 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107791 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107732 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107731 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107672 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107671 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107612 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107611 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107552 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 107551 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgctt 107497 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 134642 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 134701 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134702 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 134740 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107984 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 107925 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107924 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107886
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133975 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134034 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134035 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134094 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134095 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134154 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134155 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134214 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134215 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134274 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134275 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134334 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 134335 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 134389 Score = 585 bits (295), Expect = e-164 Identities = 385/415 (92%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107087 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107028 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107027 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106968 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 106967 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106908 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106907 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106848 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106847 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106788 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106787 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106728 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 106727 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgctt 106673 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 133902 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 133961 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133962 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 134000 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 107160 ctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttttcctggga 107101 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107100 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 107062
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 579 bits (292), Expect = e-162 Identities = 389/420 (92%), Gaps = 6/420 (1%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 133463 Query: 204 tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 258 |||||||||| |||||||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 133464 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 133523 Query: 259 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 318 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 133524 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 133583 Query: 319 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133584 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 133643 Query: 379 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 438 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 133644 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 133703 Query: 439 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 498 |||||||||||||||||||||||||||||||| || || ||| ||||| ||||||||| Sbjct: 133704 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggagcttccctc 133763 Query: 499 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133764 taa-gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 133822 Score = 579 bits (292), Expect = e-162 Identities = 389/420 (92%), Gaps = 6/420 (1%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 106819 Query: 204 tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 258 |||||||||| |||||||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 106818 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 106759 Query: 259 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 318 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 106758 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 106699 Query: 319 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106698 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 106639 Query: 379 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 438 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 106638 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 106579 Query: 439 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 498 |||||||||||||||||||||||||||||||| || || ||| ||||| ||||||||| Sbjct: 106578 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggagcttccctc 106519 Query: 499 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106518 taa-gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 106460 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133331 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 133390 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 133391 gtatggcatgggt----tacttcagcgccgtagcgcctggta 133428 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106951 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 106892 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 106891 gtatggcatgggt----tacttcagcgccgtagcgcctggta 106854
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 563 bits (284), Expect = e-157 Identities = 384/416 (92%), Gaps = 1/416 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 5804 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 5745 Query: 204 tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 262 ||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||| Sbjct: 5744 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 5685 Query: 263 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 322 |||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct: 5684 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 5625 Query: 323 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 5565 Query: 383 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 442 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5564 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 5505 Query: 443 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 502 |||||||||||||||||||||||||||| | ||| ||| ||||| | |||| |||||| Sbjct: 5504 aagccgacattctcgcttccgcttcgtccaaccctgctcgcgcgggtacttcgttctaag 5445 Query: 503 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| Sbjct: 5444 gcggaacgctcccctaccgattcatttttagatcccacagcttcggcagatcgctt 5389 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 5877 ctgtgtcggtttcgggtacaggtacccttttgtttaaggtcgttcgagcttttcttggga 5818 Query: 62 gtatggcatc 71 |||||||||| Sbjct: 5817 gtatggcatc 5808
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 563 bits (284), Expect = e-157 Identities = 384/416 (92%), Gaps = 1/416 (0%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 22121 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 22180 Query: 204 tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 262 ||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||| Sbjct: 22181 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 22240 Query: 263 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 322 |||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct: 22241 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 22300 Query: 323 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22301 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 22360 Query: 383 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 442 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 22361 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 22420 Query: 443 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 502 |||||||||||||||||||||||||||| | ||| ||| ||||| | |||| |||||| Sbjct: 22421 aagccgacattctcgcttccgcttcgtccaaccctgctcgcgcgggtacttcgttctaag 22480 Query: 503 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| Sbjct: 22481 gcggaacgctcccctaccgattcatttttagatcccacagcttcggcagatcgctt 22536 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 22048 ctgtgtcggtttcgggtacaggtacccttttgtttaaggtcgttcgagcttttcttggga 22107 Query: 62 gtatggcatc 71 |||||||||| Sbjct: 22108 gtatggcatc 22117
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 557 bits (281), Expect = e-155 Identities = 372/401 (92%), Gaps = 1/401 (0%) Strand = Plus / Minus Query: 158 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaa 217 ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||| || Sbjct: 1665 agcgcctggtattcgaacattggctcgaggcattttctctaccccttcttaccctgacaa 1606 Query: 218 agcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctcc 277 ||||||| |||||| || ||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1605 agcagggacaccttacgttcttgaaccgataaccatctttcggctaacctagcctcctcc 1546 Query: 278 gtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgc 337 ||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||| || Sbjct: 1545 gtccctcgggaccaacaaggggcagtacaggaatattcacctgttgtccatcgacta-gc 1487 Query: 338 ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacc 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1486 ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaccc 1427 Query: 398 ttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcg 457 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1426 ttaggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcg 1367 Query: 458 cttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccct 517 ||||||||||||| ||| ||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 1366 cttccgcttcgtccaccaccgctcgcgcggaggcttctctctaaggcggaacgctcccct 1307 Query: 518 accgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 1306 accgatgtatttttacatcccacagcttcggcagatcgctt 1266 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 1751 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 1692 Query: 62 gtatggcatcggttac 77 ||||||||| |||||| Sbjct: 1691 gtatggcatgggttac 1676
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 539 bits (272), Expect = e-150 Identities = 380/412 (92%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||| |||| || | ||||||||| ||||||||||||||| Sbjct: 1598 tacttcagcgccgtagcgcctggt-ctcgaacattggctcgaggtattttctctacccct 1540 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||||||| |||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1539 tcttaccctgaaaa-gcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1481 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 1480 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1421 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccct-ccgtggacgaac 382 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1420 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctaccgtggacgaac 1361 Query: 383 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 442 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1360 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 1301 Query: 443 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 502 |||||||||||||||||||||||||||| ||| | ||| ||| | |||||||| ||||| Sbjct: 1300 aagccgacattctcgcttccgcttcgtctaccactgctcgcgcaggtgcttccccctaag 1241 Query: 503 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatc 554 |||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1240 acggaacgctcccctaccgatgcctttttacatcccacagcttcggcagatc 1189 Score = 143 bits (72), Expect = 7e-31 Identities = 94/101 (93%), Gaps = 4/101 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1671 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 1612 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggt 102 ||||||| ||| |||||||||||||||||||||||| Sbjct: 1611 gtatggctagggt----tacttcagcgccgtagcgcctggt 1575
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 539 bits (272), Expect = e-150 Identities = 383/415 (92%), Gaps = 5/415 (1%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||||| |||||| |||||||| || | ||||||||||||||||||||||||| Sbjct: 850 tacttcagcgctgtagcgct-ggtactcgaactttggctcgaggcattttctctacccct 792 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 | ||||||||||||||||||| |||| || |||||| |||| |||||||||||||||||| Sbjct: 791 tattaccctgaaaaagcaggggcaccatgcgtccttgaaccgataaccatctttcggcta 732 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 731 acctagcctcctccgtccctcgg-accaacaaagggtagtacaggaatattcacctgttg 673 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 tccatcgactacg--tttcggcctgatcttaggccctgactcaccctccgtggacgaacc 615 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 614 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 555 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| | | | ||| ||||| | |||||| |||||| Sbjct: 554 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccccctaagg 495 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 494 cggaacg-tcccctaccgattcattttgacatcccacagcttcggcagatcgctt 441 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 923 ctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttttcctggga 864 Query: 62 gtatggcat 70 ||||||||| Sbjct: 863 gtatggcat 855
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 537 bits (271), Expect = e-149 Identities = 380/415 (91%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 2078 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 2019 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 2018 tcttaccctgaaaaa-cagggtcacctttcgtccttgaaccgataaccatctttcggcta 1960 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||||||| Sbjct: 1959 acctagcctcctccgtccctcgggccctacaaggggtagtacaggaatattcacctgttg 1900 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1840 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1839 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1780 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||||||||||||||||| | ||| ||| | |||||||| |||| Sbjct: 1779 agccgacattctcgcttccgcttcgtctggcatggctcgcgccgatgcttccccctaaca 1720 Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 1719 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagatcgctt 1665 Score = 161 bits (81), Expect = 3e-36 Identities = 97/102 (95%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2151 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 2092 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2091 gtatggcatgggt----tacttcagcgccgtagcgcctggta 2054
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 517 bits (261), Expect = e-143 Identities = 261/261 (100%) Strand = Plus / Minus Query: 298 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 388 Query: 358 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 328 Query: 418 attctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 attctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 268 Query: 478 gctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcc 208 Query: 538 cacagcttcggcagatcgctt 558 ||||||||||||||||||||| Sbjct: 207 cacagcttcggcagatcgctt 187
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 513 bits (259), Expect = e-142 Identities = 311/327 (95%), Gaps = 1/327 (0%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130209 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130268 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 130269 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 130327 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 130328 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130387 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130388 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130447 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130448 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130507 Query: 444 agccgacattctcgcttccgcttcgtc 470 ||||||||||||||||||||||||||| Sbjct: 130508 agccgacattctcgcttccgcttcgtc 130534 Score = 513 bits (259), Expect = e-142 Identities = 311/327 (95%), Gaps = 1/327 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 103236 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 103177 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 ||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 103176 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 103118 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 103117 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103058 Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103057 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 102998 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102997 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 102938 Query: 444 agccgacattctcgcttccgcttcgtc 470 ||||||||||||||||||||||||||| Sbjct: 102937 agccgacattctcgcttccgcttcgtc 102911 Score = 168 bits (85), Expect = 1e-38 Identities = 98/102 (96%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130136 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 130195 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 130196 gtatggcatcggt----tacttcagcgccgtagcgcctggta 130233 Score = 168 bits (85), Expect = 1e-38 Identities = 98/102 (96%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103309 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 103250 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 103249 gtatggcatcggt----tacttcagcgccgtagcgcctggta 103212 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| Sbjct: 130568 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagaccgctt 130622 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| Sbjct: 102877 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagaccgctt 102823
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 500 bits (252), Expect = e-138 Identities = 312/332 (93%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 1504 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 1445 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1444 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 1385 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1384 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1325 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1324 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 1265 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 1264 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 1205 Query: 527 ttttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||| ||||| Sbjct: 1204 ttttgacatcccacagcttcggcagaccgctt 1173 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||| | ||||||||||||||||| ||| | Sbjct: 1665 ctgtgtcggtttcgggtacaggtacccacttgttaatggtcgttcgagcttttcttggaa 1606 Query: 62 gtatggcatcggttac 77 || |||||| |||||| Sbjct: 1605 gtgtggcattggttac 1590 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 166 gtactcggacctcggctcgaggcattttctctaccc 201 |||||| ||| | ||||||||||||||||||||||| Sbjct: 1570 gtactcagacgttggctcgaggcattttctctaccc 1535
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 500 bits (252), Expect = e-138 Identities = 312/332 (93%) Strand = Plus / Plus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 116645 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 116704 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 116705 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 116764 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 116765 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 116824 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 116825 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 116884 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 116885 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 116944 Query: 527 ttttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||| ||||| Sbjct: 116945 ttttgacatcccacagcttcggcagaccgctt 116976 Score = 500 bits (252), Expect = e-138 Identities = 312/332 (93%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 91457 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 91398 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 91397 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 91338 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 91337 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 91278 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 91277 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 91218 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 91217 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 91158 Query: 527 ttttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||| ||||| Sbjct: 91157 ttttgacatcccacagcttcggcagaccgctt 91126 Score = 97.6 bits (49), Expect = 4e-17 Identities = 89/102 (87%), Gaps = 4/102 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| | Sbjct: 116484 ctgtgtcggtttcgggtacaggtacccacttgttaaaggtcgttcgagcttttcttggaa 116543 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 || |||||| | | ||||||||| ||||||||||||||| Sbjct: 116544 gtgtggcattgat----tacttcagcaccgtagcgcctggta 116581 Score = 97.6 bits (49), Expect = 4e-17 Identities = 89/102 (87%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| | Sbjct: 91618 ctgtgtcggtttcgggtacaggtacccacttgttaaaggtcgttcgagcttttcttggaa 91559 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 || |||||| | | ||||||||| ||||||||||||||| Sbjct: 91558 gtgtggcattgat----tacttcagcaccgtagcgcctggta 91521 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| | Sbjct: 116557 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 116616 Query: 204 tcttacc 210 | ||||| Sbjct: 116617 ttttacc 116623 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| | Sbjct: 91545 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 91486 Query: 204 tcttacc 210 | ||||| Sbjct: 91485 ttttacc 91479
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 496 bits (250), Expect = e-137 Identities = 348/377 (92%), Gaps = 4/377 (1%) Strand = Plus / Minus Query: 186 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 241 ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 5797 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccaaccctgctc 5738 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| | |||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 5737 gcgcgggtacttctttctaaggcggaacgctcccctaccgattcatttttacatcccaca 5678 Query: 542 gcttcggcagatcgctt 558 ||||||||| ||||||| Sbjct: 5677 gcttcggcaaatcgctt 5661 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||| Sbjct: 6163 ctgtgtcggtttccggtacaggtaccctcttgttgtaggtcgttcgaacttttcctggga 6104 Query: 62 gtatggcatc 71 |||||||||| Sbjct: 6103 gtatggcatc 6094
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 496 bits (250), Expect = e-137 Identities = 348/377 (92%), Gaps = 4/377 (1%) Strand = Plus / Minus Query: 186 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 241 ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 242 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 301 ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918 Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 5797 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccaaccctgctc 5738 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 ||||| | |||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 5737 gcgcgggtacttctttctaaggcggaacgctcccctaccgattcatttttacatcccaca 5678 Query: 542 gcttcggcagatcgctt 558 ||||||||| ||||||| Sbjct: 5677 gcttcggcaaatcgctt 5661 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||| Sbjct: 6163 ctgtgtcggtttccggtacaggtaccctcttgttgtaggtcgttcgaacttttcctggga 6104 Query: 62 gtatggcatc 71 |||||||||| Sbjct: 6103 gtatggcatc 6094
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 490 bits (247), Expect = e-135 Identities = 253/255 (99%) Strand = Plus / Plus Query: 304 acaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgac 363 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1 acaggaatattgacctgttgtccatcgagtacgcctttcggcctgatcttaggccctgac 60 Query: 364 tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 120 Query: 424 accaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttc 180 Query: 484 gcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagc 543 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagc 240 Query: 544 ttcggcagatcgctt 558 ||||||||||||||| Sbjct: 241 ttcggcagatcgctt 255
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 484 bits (244), Expect = e-133 Identities = 361/400 (90%), Gaps = 5/400 (1%) Strand = Plus / Plus Query: 164 tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 223 |||||||||||| | ||||| |||||||||||||||||||||||||| | ||||| | | Sbjct: 144982 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 145041 Query: 224 gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 278 || |||||| |||||| |||| |||||||||| ||||||||| |||||||||||| Sbjct: 145042 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 145101 Query: 279 tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 338 |||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 145102 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 145161 Query: 339 tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 398 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 145162 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 145221 Query: 399 tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgc 458 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145222 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgc 145281 Query: 459 ttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctccccta 518 |||||||| ||| || || ||| ||| | |||||||||||||||||||||||||||||| Sbjct: 145282 ttccgctttgtccacacctgctcgcgctggtgcttccctctaaggcggaacgctccccta 145341 Query: 519 ccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||| |||||||||||||||||||||||||| ||||| Sbjct: 145342 ccgatgttttttgacatcccacagcttcggcagaccgctt 145381 Score = 484 bits (244), Expect = e-133 Identities = 361/400 (90%), Gaps = 5/400 (1%) Strand = Plus / Minus Query: 164 tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 223 |||||||||||| | ||||| |||||||||||||||||||||||||| | ||||| | | Sbjct: 113480 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 113421 Query: 224 gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 278 || |||||| |||||| |||| |||||||||| ||||||||| |||||||||||| Sbjct: 113420 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 113361 Query: 279 tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 338 |||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 113360 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 113301 Query: 339 tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 398 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 113300 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 113241 Query: 399 tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgc 458 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 113240 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgc 113181 Query: 459 ttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctccccta 518 |||||||| ||| || || ||| ||| | |||||||||||||||||||||||||||||| Sbjct: 113180 ttccgctttgtccacacctgctcgcgctggtgcttccctctaaggcggaacgctccccta 113121 Query: 519 ccgatgcattttgacatcccacagcttcggcagatcgctt 558 |||||| |||||||||||||||||||||||||| ||||| Sbjct: 113120 ccgatgttttttgacatcccacagcttcggcagaccgctt 113081 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| Sbjct: 144889 ctgtgtcggtttcgggtacaggtacccactcgttgaaggtcgttcgagcttttcttggga 144948 Query: 62 gtatggcat 70 || |||||| Sbjct: 144949 gtgtggcat 144957 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| Sbjct: 113573 ctgtgtcggtttcgggtacaggtacccactcgttgaaggtcgttcgagcttttcttggga 113514 Query: 62 gtatggcat 70 || |||||| Sbjct: 113513 gtgtggcat 113505
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 480 bits (242), Expect = e-132 Identities = 374/417 (89%), Gaps = 2/417 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533 Query: 204 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 261 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473 Query: 262 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 321 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413 Query: 322 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353 Query: 382 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 441 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293 Query: 442 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 501 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 1292 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 1233 Query: 502 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 1232 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgctt 1176 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/103 (86%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||| Sbjct: 1665 ctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttttcttggga 1606 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 || |||||| || ||||||||||||||||| ||| |||| Sbjct: 1605 gtgtggcatgagt----tacttcagcgccgtagcacctagtat 1567
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 480 bits (242), Expect = e-132 Identities = 374/417 (89%), Gaps = 2/417 (0%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 149653 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 149712 Query: 204 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 261 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 149713 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 149772 Query: 262 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 321 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 149773 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 149832 Query: 322 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 149892 Query: 382 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 441 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149893 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 149952 Query: 442 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 501 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 149953 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 150012 Query: 502 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 150013 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgctt 150069 Score = 480 bits (242), Expect = e-132 Identities = 374/417 (89%), Gaps = 2/417 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 119013 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 118954 Query: 204 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 261 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 118953 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 118894 Query: 262 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 321 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 118893 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 118834 Query: 322 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 118774 Query: 382 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 441 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118773 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 118714 Query: 442 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 501 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 118713 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 118654 Query: 502 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 118653 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgctt 118597 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/103 (86%), Gaps = 4/103 (3%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||| Sbjct: 149580 ctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttttcttggga 149639 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 || |||||| || ||||||||||||||||| ||| |||| Sbjct: 149640 gtgtggcatgagt----tacttcagcgccgtagcacctagtat 149678 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/103 (86%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||| Sbjct: 119086 ctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttttcttggga 119027 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 || |||||| || ||||||||||||||||| ||| |||| Sbjct: 119026 gtgtggcatgagt----tacttcagcgccgtagcacctagtat 118988
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 480 bits (242), Expect = e-132 Identities = 374/417 (89%), Gaps = 2/417 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533 Query: 204 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 261 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473 Query: 262 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 321 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413 Query: 322 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353 Query: 382 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 441 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293 Query: 442 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 501 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 1292 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 1233 Query: 502 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 1232 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgctt 1176 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/103 (86%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||| Sbjct: 1665 ctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttttcttggga 1606 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 || |||||| || ||||||||||||||||| ||| |||| Sbjct: 1605 gtgtggcatgagt----tacttcagcgccgtagcacctagtat 1567
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 476 bits (240), Expect = e-131 Identities = 309/332 (93%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||| | Sbjct: 5397 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 5338 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 |||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5337 gaccaactaaggatagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 5278 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5277 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 5218 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5217 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 5158 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 5157 cgtccacacctgctcacgctggtgcttccctctaaggcggaacgctcccctaccgatgta 5098 Query: 527 ttttgacatcccacagcttcggcagatcgctt 558 ||| |||||||||||||||||||||| ||||| Sbjct: 5097 tttcgacatcccacagcttcggcagaccgctt 5066 Score = 91.7 bits (46), Expect = 2e-15 Identities = 89/103 (86%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||| Sbjct: 5555 ctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttttcttggga 5496 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 || |||||| || ||||||||||||||||| ||| |||| Sbjct: 5495 gtgtggcatgagt----tacttcagcgccgtagcacctagtat 5457
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 476 bits (240), Expect = e-131 Identities = 309/332 (93%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 1488 accttgagtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 1429 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1428 gaccaacaaggggtagtacaggaatattcgcctgttgtccatcgactacgccttttggcc 1369 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| Sbjct: 1368 tgatcttaggccctgactcaccctccgtggacgaaccttgcagaggaacccttaggtttt 1309 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1308 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 1249 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || || ||| ||| | ||||| ||||||||||||||||||||||||||||| | Sbjct: 1248 cgtccacacctgctcacgctggcgcttctctctaaggcggaacgctcccctaccgatgta 1189 Query: 527 ttttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||| ||||| Sbjct: 1188 ttttgacatcccacagcttcggcagaccgctt 1157 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||| Sbjct: 1626 ctgtgtcggtttcgggtacaggtacccacttgcttaaggtcgttcgagcttttcttggga 1567 Query: 62 gtatggcat 70 || |||||| Sbjct: 1566 gtgtggcat 1558 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 200 ||||||||| | | |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1553 tacttcagcaccgtagcgcttggtactcggacgttggctcgaggcattttctctacc 1497
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 470 bits (237), Expect = e-129 Identities = 375/419 (89%), Gaps = 4/419 (0%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 51097 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 51156 Query: 204 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 259 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 51157 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 51216 Query: 260 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 319 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 51217 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 51276 Query: 320 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 379 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51277 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 51336 Query: 380 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 439 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 51337 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 51396 Query: 440 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 499 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 51397 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 51456 Query: 500 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| Sbjct: 51457 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctt 51515 Score = 470 bits (237), Expect = e-129 Identities = 375/419 (89%), Gaps = 4/419 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 38731 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 38672 Query: 204 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 259 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 38671 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 38612 Query: 260 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 319 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 38611 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 38552 Query: 320 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 379 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38551 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 38492 Query: 380 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 439 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 38491 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 38432 Query: 440 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 499 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 38431 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 38372 Query: 500 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| Sbjct: 38371 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctt 38313 Score = 97.6 bits (49), Expect = 4e-17 Identities = 90/102 (88%), Gaps = 5/102 (4%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgagcttttcctggg 60 ||||||||||||| ||||||||| |||||||| || |||| ||||||||||||||| ||| Sbjct: 51023 ctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgagcttttcccggg 51082 Query: 61 agtatggcatcggttacatacttcagcgccgtagcgcctggt 102 |||||||| | ||| |||||||||||||||||||||||| Sbjct: 51083 agtatggcgtgggt----tacttcagcgccgtagcgcctggt 51120 Score = 97.6 bits (49), Expect = 4e-17 Identities = 90/102 (88%), Gaps = 5/102 (4%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgagcttttcctggg 60 ||||||||||||| ||||||||| |||||||| || |||| ||||||||||||||| ||| Sbjct: 38805 ctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgagcttttcccggg 38746 Query: 61 agtatggcatcggttacatacttcagcgccgtagcgcctggt 102 |||||||| | ||| |||||||||||||||||||||||| Sbjct: 38745 agtatggcgtgggt----tacttcagcgccgtagcgcctggt 38708
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 470 bits (237), Expect = e-129 Identities = 310/333 (93%), Gaps = 1/333 (0%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||| | Sbjct: 1505 accttgcgtccttgaaccgataaccatctctcggctaacctagcctcctccgtccctcgg 1446 Query: 287 taccaacaagggg-tagtacaggaatattgacctgttgtccatcgactacgcctttcggc 345 |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1445 gaccaacaagggggtggtacaggaatattcacctgttgtccatcgactacgcctttcggc 1386 Query: 346 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 405 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1385 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1326 Query: 406 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 465 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1325 tcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgct 1266 Query: 466 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 525 ||||| || || ||| ||| | |||||||| ||||||||||||||||||||||||||| Sbjct: 1265 tcgtccacacctgctcgcgctggtgcttccccctaaggcggaacgctcccctaccgatgt 1206 Query: 526 attttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||| ||||| Sbjct: 1205 tttttgacatcccacagcttcggcagaccgctt 1173 Score = 121 bits (61), Expect = 3e-24 Identities = 92/102 (90%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1667 ctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagcttttcttggga 1608 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 || |||||| ||| ||||||||| ||||||||||||||| Sbjct: 1607 gtgtggcatgggt----tacttcagcaccgtagcgcctggta 1570 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||| | | ||||| |||||||||||| | |||| |||| ||||||||||||||| Sbjct: 1594 tacttcagcaccgtagcgcctggtactcggacgttggcttgaggtattttctctacccct 1535 Query: 204 tcttaccct 212 |||||||| Sbjct: 1534 ccttaccct 1526
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 470 bits (237), Expect = e-129 Identities = 375/419 (89%), Gaps = 4/419 (0%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 5659 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 5600 Query: 204 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 259 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 5599 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 5540 Query: 260 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 319 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 5539 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 5480 Query: 320 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 379 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5479 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 5420 Query: 380 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 439 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 5419 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 5360 Query: 440 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 499 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 5359 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 5300 Query: 500 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| Sbjct: 5299 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctt 5241 Score = 97.6 bits (49), Expect = 4e-17 Identities = 90/102 (88%), Gaps = 5/102 (4%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgagcttttcctggg 60 ||||||||||||| ||||||||| |||||||| || |||| ||||||||||||||| ||| Sbjct: 5733 ctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgagcttttcccggg 5674 Query: 61 agtatggcatcggttacatacttcagcgccgtagcgcctggt 102 |||||||| | ||| |||||||||||||||||||||||| Sbjct: 5673 agtatggcgtgggt----tacttcagcgccgtagcgcctggt 5636
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 468 bits (236), Expect = e-128 Identities = 302/324 (93%) Strand = Plus / Minus Query: 235 tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 294 ||||| |||| ||||||||||||||||||||||||||| ||||||||||| | |||| || Sbjct: 1500 tccttgaaccgataaccatctttcggctaacctagcctactccgtccctcgggaccagca 1441 Query: 295 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1440 aggggtagtacaggaatattcgcctgttgtccatcgactacgcctttcggcctgatctta 1381 Query: 355 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 414 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1380 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1321 Query: 415 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 474 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 1320 tggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgcttcgtccaca 1261 Query: 475 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgaca 534 || ||| ||| | |||||| | ||||||||||||||||||||||||||| ||||||||| Sbjct: 1260 cctgctcacgctggtgcttctccctaaggcggaacgctcccctaccgatgtattttgaca 1201 Query: 535 tcccacagcttcggcagatcgctt 558 |||||||||||||||||| ||||| Sbjct: 1200 tcccacagcttcggcagaccgctt 1177 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| | | | ||||||||||||||||||| |||| Sbjct: 1671 ctgtgtcggtttcgggtacaggtacccactcgcttaaggtcgttcgagcttttctcggga 1612 Query: 62 gtatggcat 70 || |||||| Sbjct: 1611 gtgtggcat 1603
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 456 bits (230), Expect = e-125 Identities = 310/334 (92%), Gaps = 2/334 (0%) Strand = Plus / Plus Query: 225 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 284 |||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 114707 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 114765 Query: 285 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 344 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 114766 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 114825 Query: 345 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 404 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 114826 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 114885 Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 114886 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 114945 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||| || || ||| || | |||||| | ||||||||||||||||||||||||||| Sbjct: 114946 ttcgtccacacctgctcacg-tgatgcttctccctaaggcggaacgctcccctaccgatg 115004 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||| Sbjct: 115005 tattttgacatcccacagcttcggcagaccgctt 115038 Score = 456 bits (230), Expect = e-125 Identities = 310/334 (92%), Gaps = 2/334 (0%) Strand = Plus / Minus Query: 225 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 284 |||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 87413 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 87355 Query: 285 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 344 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 87354 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 87295 Query: 345 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 404 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 87294 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 87235 Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 87234 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 87175 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||| || || ||| || | |||||| | ||||||||||||||||||||||||||| Sbjct: 87174 ttcgtccacacctgctcacg-tgatgcttctccctaaggcggaacgctcccctaccgatg 87116 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| ||||| Sbjct: 87115 tattttgacatcccacagcttcggcagaccgctt 87082 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| Sbjct: 114547 ctgtgtcggtttcgggtacaggtacccacttgtttaaggtcgttcgagcttttcttggga 114606 Query: 62 gtatggcat 70 || |||||| Sbjct: 114607 gtgtggcat 114615 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| Sbjct: 87573 ctgtgtcggtttcgggtacaggtacccacttgtttaaggtcgttcgagcttttcttggga 87514 Query: 62 gtatggcat 70 || |||||| Sbjct: 87513 gtgtggcat 87505 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 161 gcttggtactcggacctcggctcgaggcattttctctacc 200 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 114636 gcttggtactcggacattggctggaagcattttcactacc 114675 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 161 gcttggtactcggacctcggctcgaggcattttctctacc 200 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 87484 gcttggtactcggacattggctggaagcattttcactacc 87445
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 450 bits (227), Expect = e-123 Identities = 377/421 (89%), Gaps = 12/421 (2%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 1043 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 984 Query: 204 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 263 |||||||||| ||| |||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 983 tcttaccctgcaaa-gcagggacaccttacgttcttgaaccgataaccatctttcggcta 925 Query: 264 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 323 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 924 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 865 Query: 324 tccatcgactacgcctttcggcctga--tc----ttaggccctgactcaccctccgtgga 377 ||||||||||||||||||||| |||| || |||||||||||||||||||||||||| Sbjct: 864 tccatcgactacgcctttcgg-ctgacgtcacgtttaggccctgactcaccctccgtgga 806 Query: 378 cgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgt 437 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | Sbjct: 805 cgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgc-- 748 Query: 438 tactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccct 497 ||||| | ||||||||||||||||||||||| ||| ||||| ||||| ||||| || Sbjct: 747 -actcacg-tgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctct 690 Query: 498 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgct 557 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 689 ctaaggcggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgct 630 Query: 558 t 558 | Sbjct: 629 t 629 Score = 137 bits (69), Expect = 4e-29 Identities = 69/69 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1693 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 1634 Query: 62 gtatggcat 70 ||||||||| Sbjct: 1633 gtatggcat 1625 Score = 131 bits (66), Expect = 3e-27 Identities = 94/103 (91%), Gaps = 4/103 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct: 1116 ctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttttcctggga 1057 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtat 104 ||||||||| ||| |||||||||||||||||||||||||| Sbjct: 1056 gtatggcatgggt----tacttcagcgccgtagcgcctggtat 1018
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 442 bits (223), Expect = e-121 Identities = 347/386 (89%), Gaps = 8/386 (2%) Strand = Plus / Minus Query: 179 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtcct 238 ||||||||| |||||||||||||||||||||||||||||| ||||| |||||| || || Sbjct: 1552 ggctcgaggtattttctctaccccttcttaccctgaaaaa-cagggacaccttacgttct 1494 Query: 239 taaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 298 | |||| |||||||||||| |||||||||||||| ||||||||||| | ||||||||||| Sbjct: 1493 tgaaccgataaccatcttttggctaacctagcctgctccgtccctcgggaccaacaaggg 1434 Query: 299 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 358 ||||||||| |||||| |||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 1433 gtagtacagaaatattcacctgttgcccatcgactac-cgtttcggcctgatcttaggcc 1375 Query: 359 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 418 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 1374 ctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcattgga 1315 Query: 419 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 478 ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| | | Sbjct: 1314 ttctcaccaatgtttgcgttactcaagccgacattctcgcttccgtttcgtccaccgctg 1255 Query: 479 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg------cattttga 532 || || | ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1254 ctcgtgcagaggcttccctctaaggcggaacgctcccctaccgatgtatttttattttta 1195 Query: 533 catcccacagcttcggcagatcgctt 558 ||||||||||||||||| |||||||| Sbjct: 1194 catcccacagcttcggcggatcgctt 1169 Score = 65.9 bits (33), Expect = 1e-07 Identities = 58/66 (87%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 37 aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 96 |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| | Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570 Query: 97 cctggt 102 |||||| Sbjct: 1569 cctggt 1564 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgtt 35 |||||| ||||||||||||||||||||||||||| Sbjct: 1673 ctgtgttggtttcgggtacaggtacccttttgtt 1640
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 432 bits (218), Expect = e-118 Identities = 375/422 (88%), Gaps = 9/422 (2%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | |||||||| ||||||| || ||| ||||||||||||||||||||| Sbjct: 4975 tacttcagcgccgtagcgcttg-tactcggcgcttggcccgaggcattttctctacccct 5033 Query: 204 tcttaccct----gaaaaa--gcagggtcaccttgtgtccttaaacctataaccatcttt 257 ||| ||||| |||||| ||| |||||||||| |||||| |||| |||||||| ||| Sbjct: 5034 tctgaccctccctgaaaaaaggcaaggtcaccttgcgtccttgaaccgataaccattttt 5093 Query: 258 cggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgac 317 ||||||||||||||||||||||||||| | |||||||| || ||||||||||||||| || Sbjct: 5094 cggctaacctagcctcctccgtccctcgggaccaacaaaggatagtacaggaatattcac 5153 Query: 318 ctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgt-gg 376 ||||||||||||||| || | ||||||||||||||||||||||||||||||| |||| || Sbjct: 5154 ctgttgtccatcgacaac-cgtttcggcctgatcttaggccctgactcaccccccgttgg 5212 Query: 377 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 436 |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || Sbjct: 5213 acgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcg 5272 Query: 437 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 496 |||||||||||||||||||| ||||||||||||| || || ||| ||||| |||||| | Sbjct: 5273 ttactcaagccgacattctcacttccgcttcgtccacacctgctcgcgcgggtgcttctc 5332 Query: 497 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 556 ||| | ||||||||||||||||||||| ||| || ||||||||||||||||||||||| Sbjct: 5333 tctgaaacggaacgctcccctaccgatgtttttagatatcccacagcttcggcagatcgc 5392 Query: 557 tt 558 || Sbjct: 5393 tt 5394 Score = 127 bits (64), Expect = 4e-26 Identities = 64/64 (100%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4902 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 4961 Query: 62 gtat 65 |||| Sbjct: 4962 gtat 4965
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 432 bits (218), Expect = e-118 Identities = 299/326 (91%) Strand = Plus / Plus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 126938 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 126997 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 126998 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 127057 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 127058 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 127117 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127118 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 127177 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || || ||| ||| |||||| ||| | ||||||||||||||||||||| Sbjct: 127178 cgtccacacctgctcacgctagtgcttctttctgatacggaacgctcccctaccgatgtc 127237 Query: 527 ttttgacatcccacagcttcggcaga 552 ||||||||| ||||||||||||||| Sbjct: 127238 ctttgacatctcacagcttcggcaga 127263 Score = 432 bits (218), Expect = e-118 Identities = 299/326 (91%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 96509 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 96450 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96449 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 96390 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 96389 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 96330 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96329 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 96270 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || || ||| ||| |||||| ||| | ||||||||||||||||||||| Sbjct: 96269 cgtccacacctgctcacgctagtgcttctttctgatacggaacgctcccctaccgatgtc 96210 Query: 527 ttttgacatcccacagcttcggcaga 552 ||||||||| ||||||||||||||| Sbjct: 96209 ctttgacatctcacagcttcggcaga 96184 Score = 113 bits (57), Expect = 6e-22 Identities = 88/98 (89%), Gaps = 4/98 (4%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 126780 ctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagcttttcttggga 126839 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcct 99 ||||| ||| ||| |||||||||||| |||||||| Sbjct: 126840 gtatgacatgggt----tacttcagcgccatagcgcct 126873 Score = 113 bits (57), Expect = 6e-22 Identities = 88/98 (89%), Gaps = 4/98 (4%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 96667 ctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagcttttcttggga 96608 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcct 99 ||||| ||| ||| |||||||||||| |||||||| Sbjct: 96607 gtatgacatgggt----tacttcagcgccatagcgcct 96574 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| ||||| | || ||||||| | |||||||||||||||||| |||||| Sbjct: 126853 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 126912 Query: 204 t 204 | Sbjct: 126913 t 126913 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| ||||| | || ||||||| | |||||||||||||||||| |||||| Sbjct: 96594 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 96535 Query: 204 t 204 | Sbjct: 96534 t 96534
>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.8), mRNA Length = 858 Score = 430 bits (217), Expect = e-117 Identities = 226/229 (98%) Strand = Plus / Plus Query: 21 aggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacata 80 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 630 aggtacccctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacata 689 Query: 81 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggc 140 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 690 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggc 749 Query: 141 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 809 Query: 201 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 249 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 858
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 426 bits (215), Expect = e-116 Identities = 215/215 (100%) Strand = Plus / Minus Query: 344 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 748 Query: 404 tttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccg 688 Query: 464 cttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgat 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 cttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgat 628 Query: 524 gcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||||||||| Sbjct: 627 gcattttgacatcccacagcttcggcagatcgctt 593
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 422 bits (213), Expect = e-115 Identities = 297/325 (91%) Strand = Plus / Minus Query: 234 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 293 |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 145425 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 145366 Query: 294 aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 353 |||||| ||||| |||||||| ||| |||||||||| ||||||||| ||||||||||||| Sbjct: 145365 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 145306 Query: 354 aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 413 ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 145305 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 145246 Query: 414 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgac 473 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 145245 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccac 145186 Query: 474 ccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgac 533 || ||| | | | ||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 145185 acctgctcgcactggtgcttccatctggggcggaacgctcccctaccgatgttttttgac 145126 Query: 534 atcccacagcttcggcagatcgctt 558 ||||||||||||||||||| ||||| Sbjct: 145125 atcccacagcttcggcagaccgctt 145101 Score = 422 bits (213), Expect = e-115 Identities = 297/325 (91%) Strand = Plus / Plus Query: 234 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 293 |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 87426 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 87485 Query: 294 aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 353 |||||| ||||| |||||||| ||| |||||||||| ||||||||| ||||||||||||| Sbjct: 87486 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 87545 Query: 354 aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 413 ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 87546 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 87605 Query: 414 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgac 473 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 87606 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccac 87665 Query: 474 ccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgac 533 || ||| | | | ||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 87666 acctgctcgcactggtgcttccatctggggcggaacgctcccctaccgatgttttttgac 87725 Query: 534 atcccacagcttcggcagatcgctt 558 ||||||||||||||||||| ||||| Sbjct: 87726 atcccacagcttcggcagaccgctt 87750 Score = 97.6 bits (49), Expect = 4e-17 Identities = 86/98 (87%), Gaps = 4/98 (4%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| Sbjct: 145576 ctgtgtcggtttcgggtacaggtacccacttgtcaaaggtcgttcgagcttttcttggga 145517 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcct 99 || |||||| ||| |||||| |||||||||||||| Sbjct: 145516 gtgtggcatgggt----tacttcggcgccgtagcgcct 145483 Score = 97.6 bits (49), Expect = 4e-17 Identities = 86/98 (87%), Gaps = 4/98 (4%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| Sbjct: 87275 ctgtgtcggtttcgggtacaggtacccacttgtcaaaggtcgttcgagcttttcttggga 87334 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcct 99 || |||||| ||| |||||| |||||||||||||| Sbjct: 87335 gtgtggcatgggt----tacttcggcgccgtagcgcct 87368 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 |||||| |||| | ||||| | |||||||||| | ||||||||||||||||||||||||| Sbjct: 145503 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 145444 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 |||||| |||| | ||||| | |||||||||| | ||||||||||||||||||||||||| Sbjct: 87348 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 87407
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 414 bits (209), Expect = e-112 Identities = 209/209 (100%) Strand = Plus / Plus Query: 350 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63490 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 63549 Query: 410 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63550 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 63609 Query: 470 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63610 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 63669 Query: 530 tgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||| Sbjct: 63670 tgacatcccacagcttcggcagatcgctt 63698
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 414 bits (209), Expect = e-112 Identities = 209/209 (100%) Strand = Plus / Minus Query: 350 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 1120 Query: 410 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 1060 Query: 470 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 1000 Query: 530 tgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||||| Sbjct: 999 tgacatcccacagcttcggcagatcgctt 971
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 377 bits (190), Expect = e-101 Identities = 298/334 (89%) Strand = Plus / Minus Query: 225 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 284 ||||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 1505 tcaccttgtatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446 Query: 285 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 344 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386 Query: 345 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 404 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326 Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 1266 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1265 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1206 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 ||| ||||||||||||||||||||| ||||| Sbjct: 1205 ttattttacatcccacagcttcggcagaccgctt 1172
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 373 bits (188), Expect = e-100 Identities = 297/329 (90%), Gaps = 7/329 (2%) Strand = Plus / Plus Query: 236 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 294 |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| Sbjct: 137767 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 137825 Query: 295 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 137826 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 137885 Query: 355 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 414 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 137886 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 137945 Query: 415 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 474 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | Sbjct: 137946 tggattctcaccaatgtttgcgttactcaagccgacactctcgcttccgcttcgtccgca 138005 Query: 475 cccgctttcgcggttgcttc---cctctaaggcggaacgctcccctaccgatgcat--tt 529 || ||| ||| | |||||| |||| |||||||||||||||||||||||| || || Sbjct: 138006 cctgctcgcgctggtgcttccctcctccgaggcggaacgctcccctaccgatgtattgtt 138065 Query: 530 tgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||| ||||| Sbjct: 138066 cgacatcccacagcttcggcagaccgctt 138094 Score = 373 bits (188), Expect = e-100 Identities = 297/329 (90%), Gaps = 7/329 (2%) Strand = Plus / Minus Query: 236 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 294 |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| Sbjct: 84110 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 84052 Query: 295 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 84051 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 83992 Query: 355 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 414 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 83991 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 83932 Query: 415 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 474 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | Sbjct: 83931 tggattctcaccaatgtttgcgttactcaagccgacactctcgcttccgcttcgtccgca 83872 Query: 475 cccgctttcgcggttgcttc---cctctaaggcggaacgctcccctaccgatgcat--tt 529 || ||| ||| | |||||| |||| |||||||||||||||||||||||| || || Sbjct: 83871 cctgctcgcgctggtgcttccctcctccgaggcggaacgctcccctaccgatgtattgtt 83812 Query: 530 tgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||| ||||| Sbjct: 83811 cgacatcccacagcttcggcagaccgctt 83783 Score = 91.7 bits (46), Expect = 2e-15 Identities = 86/99 (86%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||| ||||||||||||| | ||||||||||||||| ||||||| ||||| Sbjct: 137600 ctgtgtcggtttcaggtacaggtacccactcgttgaaggtcgttcgggcttttcttggga 137659 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctg 100 || |||||| || |||||||||||||||||||||| Sbjct: 137660 gtgtggcatgagt----tacttcagcgccgtagcgcctg 137694 Score = 91.7 bits (46), Expect = 2e-15 Identities = 86/99 (86%), Gaps = 4/99 (4%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||| ||||||||||||| | ||||||||||||||| ||||||| ||||| Sbjct: 84277 ctgtgtcggtttcaggtacaggtacccactcgttgaaggtcgttcgggcttttcttggga 84218 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctg 100 || |||||| || |||||||||||||||||||||| Sbjct: 84217 gtgtggcatgagt----tacttcagcgccgtagcgcctg 84183 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 202 ||||||||||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 137673 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 137731 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 202 ||||||||||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 84204 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 84146
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 369 bits (186), Expect = 7e-99 Identities = 297/334 (88%) Strand = Plus / Minus Query: 225 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 284 |||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 5538 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 5479 Query: 285 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 344 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 5478 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 5419 Query: 345 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 404 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 5418 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 5359 Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5358 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 5299 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 5298 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 5239 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 ||| ||||||||||||||||||||| ||||| Sbjct: 5238 ttattttacatcccacagcttcggcagaccgctt 5205
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 369 bits (186), Expect = 7e-99 Identities = 297/334 (88%) Strand = Plus / Minus Query: 225 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 284 |||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 1505 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446 Query: 285 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 344 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386 Query: 345 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 404 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326 Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 1266 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1265 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1206 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 ||| ||||||||||||||||||||| ||||| Sbjct: 1205 ttattttacatcccacagcttcggcagaccgctt 1172
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 361 bits (182), Expect = 2e-96 Identities = 296/334 (88%) Strand = Plus / Minus Query: 225 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 284 ||||||||| ||||| |||| || ||||| ||||||| || ||||||| ||||||||||| Sbjct: 1500 tcaccttgtatccttgaaccgatcaccatttttcggccaatctagccttctccgtccctc 1441 Query: 285 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 344 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1440 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1381 Query: 345 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 404 ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| Sbjct: 1380 cctaatcttaggccctgactaaccctccgtggacgaaccttgcggaggaacccttaggtt 1321 Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1320 ttcggggcattggattctcaccaatgtttccgttactcaagccgacattctcgcttccgc 1261 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||| || | | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1260 ttcgtccacatctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1201 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 ||||| |||||||||||||||||||| ||||| Sbjct: 1200 tattttagcatcccacagcttcggcagaccgctt 1167
>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full insert sequence Length = 425 Score = 359 bits (181), Expect = 6e-96 Identities = 190/193 (98%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 193 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 134 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 gtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 74 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 aatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 14 Query: 182 tcgaggcattttc 194 ||||||||||||| Sbjct: 13 tcgaggcattttc 1
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 347 bits (175), Expect = 2e-92 Identities = 290/326 (88%), Gaps = 3/326 (0%) Strand = Plus / Minus Query: 236 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 295 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 1481 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 1422 Query: 296 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 1421 ataagtggtacaggaatattaacctgttgtccatcgactgcgcctttcggcctcatctta 1362 Query: 355 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 414 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1361 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1302 Query: 415 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 474 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 1301 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 1242 Query: 475 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 532 | |||||||| |||||| | ||| || ||||||||||||||||||| |||||| Sbjct: 1241 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcttttttga 1182 Query: 533 catcccacagcttcggcagatcgctt 558 |||||||||||||||||||| ||||| Sbjct: 1181 catcccacagcttcggcagaccgctt 1156 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 40 gtcgttcgagcttttcctgggagtatggcatcggttac 77 |||||||||||||||| |||||||||||||| |||||| Sbjct: 1589 gtcgttcgagcttttcttgggagtatggcataggttac 1552 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gctcgaggcattttctctacc 200 ||||||||||||||||||||| Sbjct: 1518 gctcgaggcattttctctacc 1498
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 331 bits (167), Expect = 1e-87 Identities = 288/326 (88%), Gaps = 3/326 (0%) Strand = Plus / Plus Query: 236 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 295 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 123784 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 123843 Query: 296 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 123844 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 123903 Query: 355 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 414 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 123904 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 123963 Query: 415 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 474 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 123964 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 124023 Query: 475 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 532 | |||||||| |||||| | ||| || ||||||||||||||||||| | ||| Sbjct: 124024 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcaaaaatga 124083 Query: 533 catcccacagcttcggcagatcgctt 558 |||||||||||||||||||| ||||| Sbjct: 124084 catcccacagcttcggcagaccgctt 124109 Score = 331 bits (167), Expect = 1e-87 Identities = 288/326 (88%), Gaps = 3/326 (0%) Strand = Plus / Minus Query: 236 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 295 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 96082 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 96023 Query: 296 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 96022 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 95963 Query: 355 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 414 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 95962 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 95903 Query: 415 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 474 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 95902 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 95843 Query: 475 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 532 | |||||||| |||||| | ||| || ||||||||||||||||||| | ||| Sbjct: 95842 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcaaaaatga 95783 Query: 533 catcccacagcttcggcagatcgctt 558 |||||||||||||||||||| ||||| Sbjct: 95782 catcccacagcttcggcagaccgctt 95757 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 40 gtcgttcgagcttttcctgggagtatggcatcggttac 77 |||||||||||||||| |||||||||||||| |||||| Sbjct: 123676 gtcgttcgagcttttcttgggagtatggcataggttac 123713 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 40 gtcgttcgagcttttcctgggagtatggcatcggttac 77 |||||||||||||||| |||||||||||||| |||||| Sbjct: 96190 gtcgttcgagcttttcttgggagtatggcataggttac 96153 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 gctcgaggcattttctctacc 200 ||||||||||||||||||||| Sbjct: 123747 gctcgaggcattttctctacc 123767 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 gctcgaggcattttctctacc 200 ||||||||||||||||||||| Sbjct: 96119 gctcgaggcattttctctacc 96099
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 311 bits (157), Expect = 1e-81 Identities = 271/307 (88%), Gaps = 4/307 (1%) Strand = Plus / Minus Query: 256 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 313 |||||||| | |||||||||||||||||| | || |||||||||||||||||||| | Sbjct: 1577 ttcggctagcttagcctcctccgtccctcttattgccgacaaggggtagtacaggaatct 1518 Query: 314 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 373 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1517 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1458 Query: 374 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 433 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1457 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1398 Query: 434 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 493 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1397 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttacactgatgctt 1338 Query: 494 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 551 | | | ||||||||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 1337 ctcccgtttgcggaacgctcccctaccgatgccctaatggacatcccacagcttcggcag 1278 Query: 552 atcgctt 558 | ||||| Sbjct: 1277 accgctt 1271 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacc 27 |||||||||||||||||||||||||| Sbjct: 1822 ctgtgtcggtttcgggtacaggtacc 1797
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 305 bits (154), Expect = 8e-80 Identities = 154/154 (100%) Strand = Plus / Minus Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526961 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 33526902 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526901 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 33526842 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||||||||||| Sbjct: 33526841 cattttgacatcccacagcttcggcagatcgctt 33526808 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 374 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 433 |||||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||||| Sbjct: 1076634 tggacgaaccttgcggaggaaaccctgggttttcgaggcattggattcttaccgatgttt 1076693 Query: 434 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 493 | ||||||||||| ||||||||| | |||||||| |||| ||| |||| | ||| |||| Sbjct: 1076694 t-gttactcaagcagacattctcacatccgcttcatcga-ccctacttttgtggtggctt 1076751 Query: 494 ccctctaaggcggaacgctcccctacc 520 |||||||||| ||||| |||||||||| Sbjct: 1076752 ccctctaaggtggaacactcccctacc 1076778 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 436 gttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttcc 495 ||||||| |||| |||||||| ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 1076806 gttactccagccaacattctcacttccactttgtcgaccct-gcttttgcggttgcttcc 1076864 Query: 496 ctctaaggcggaacgctcccctaccgatg 524 | |||||| |||| ||| || ||||||| Sbjct: 1076865 ttttaaggcagaacactcaccaaccgatg 1076893 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 526 attttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||| |||||||||||| Sbjct: 527960 attttgacatcccacagctttggcagatcgctt 527928 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 417 gattctcaccaatgttttcgttactcaa 444 |||||||||||||||||||||||||||| Sbjct: 33498146 gattctcaccaatgttttcgttactcaa 33498173 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ctacgcctttcggcctgatc 351 |||||||||||||||||||| Sbjct: 41814877 ctacgcctttcggcctgatc 41814858
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 305 bits (154), Expect = 8e-80 Identities = 154/154 (100%) Strand = Plus / Minus Query: 405 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72158 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 72099 Query: 465 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72098 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 72039 Query: 525 cattttgacatcccacagcttcggcagatcgctt 558 |||||||||||||||||||||||||||||||||| Sbjct: 72038 cattttgacatcccacagcttcggcagatcgctt 72005 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 417 gattctcaccaatgttttcgttactcaa 444 |||||||||||||||||||||||||||| Sbjct: 43343 gattctcaccaatgttttcgttactcaa 43370
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 295 bits (149), Expect = 8e-77 Identities = 269/307 (87%), Gaps = 4/307 (1%) Strand = Plus / Minus Query: 256 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 313 |||||||| | |||||||||||||||||| | || | |||| ||||||||||||| | Sbjct: 1460 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1401 Query: 314 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 373 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1400 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1341 Query: 374 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 433 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1340 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1281 Query: 434 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 493 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1280 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttgcactgatgctt 1221 Query: 494 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 551 | | || ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1220 ctcccttttgcggaacgctcccctaccgatgccctaacggacatcccacagcttcggcag 1161 Query: 552 atcgctt 558 | ||||| Sbjct: 1160 accgctt 1154 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtac 26 ||||||||||||||||||||||||| Sbjct: 1684 ctgtgtcggtttcgggtacaggtac 1660
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 295 bits (149), Expect = 8e-77 Identities = 269/307 (87%), Gaps = 4/307 (1%) Strand = Plus / Minus Query: 256 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 313 |||||||| | |||||||||||||||||| | || | |||| ||||||||||||| | Sbjct: 1473 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1414 Query: 314 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 373 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1413 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1354 Query: 374 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 433 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1353 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1294 Query: 434 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 493 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1293 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttgcactgatgctt 1234 Query: 494 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 551 | | || ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1233 ctcccttttgcggaacgctcccctaccgatgccctaacggacatcccacagcttcggcag 1174 Query: 552 atcgctt 558 | ||||| Sbjct: 1173 accgctt 1167 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtac 26 ||||||||||||||||||||||||| Sbjct: 1697 ctgtgtcggtttcgggtacaggtac 1673
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 287 bits (145), Expect = 2e-74 Identities = 288/333 (86%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| || Sbjct: 4519 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 4461 Query: 287 tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 345 || || || | | ||||||||||||||||| ||| |||||||| | ||||||||||| Sbjct: 4460 tagttaataaagaatggtacaggaatattgaccagttatccatcgattgcgcctttcggc 4401 Query: 346 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 405 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 4400 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 4341 Query: 406 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 465 |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||| Sbjct: 4340 tcggggcattggattcccaccaatgtttgcgttactcaagccgacattctcacttctgct 4281 Query: 466 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 525 ||||| || | | |||| | | |||||| ||||| || ||||||||||||||||||| Sbjct: 4280 tcgtccacatctgttttcactgatgcttcactctatagcagaacgctcccctaccgatgt 4221 Query: 526 attttgacatcccacagcttcggcagatcgctt 558 | || ||||||||||| ||||||| ||||||| Sbjct: 4220 acttaaacatcccacagtttcggcaaatcgctt 4188
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 285 bits (144), Expect = 8e-74 Identities = 286/332 (86%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 ||||||| |||||||||| ||||||||| ||||| |||| |||||| ||||||||||| | Sbjct: 1484 accttgtatccttaaaccgataaccatcattcggataacttagccttctccgtccctcag 1425 Query: 287 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 346 || || | | ||||||||||||| ||| ||| |||||||| | ||||| |||||| Sbjct: 1424 agttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctgtcggcc 1365 Query: 347 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 406 | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1364 tcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1305 Query: 407 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 1304 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 1245 Query: 467 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 526 |||| || | | |||| | | |||||| ||||| || ||||||||||||||||||| | Sbjct: 1244 cgtccacatctgttttcactggtgcttcactctatagcagaacgctcccctaccgatgta 1185 Query: 527 ttttgacatcccacagcttcggcagatcgctt 558 || ||||||||||| ||||||| ||||||| Sbjct: 1184 -ttaaacatcccacagtttcggcaaatcgctt 1154
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 276 bits (139), Expect = 7e-71 Identities = 190/207 (91%) Strand = Plus / Minus Query: 352 ttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgggg 411 ||||||| ||||||||||||||||||||||||||||||||||| |||| | |||| |||| Sbjct: 1372 ttaggccttgactcaccctccgtggacgaaccttgcggaggaacccttagtttttggggg 1313 Query: 412 cattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcg 471 |||| ||||||||||||||||| |||||||||||| |||||| |||||||||||||||| Sbjct: 1312 cattagattctcaccaatgtttgcgttactcaagcggacattttcgcttccgcttcgtcc 1253 Query: 472 acccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttg 531 |||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1252 acccttgctggcgcggttgcttccctttaaggcggaacgctcccctacggatgcattttt 1193 Query: 532 acatcccacagcttcggcagatcgctt 558 ||||||||||||||||||||||||||| Sbjct: 1192 acatcccacagcttcggcagatcgctt 1166 Score = 153 bits (77), Expect = 7e-34 Identities = 96/102 (94%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1674 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 1615 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggta 103 ||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1614 gtatggcatgggt----tacttcagcgccgtatcgcctggta 1577 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 144 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 203 ||||||||||| | | ||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 1601 tacttcagcgccgtatcgcctggtactcgaacattggctcgaggcattttctctacccct 1542 Query: 204 tcttaccctgaaaaagcaggg 224 ||||||||||||||| ||||| Sbjct: 1541 tcttaccctgaaaaaccaggg 1521
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 272 bits (137), Expect = 1e-69 Identities = 286/333 (85%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 227 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 286 ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| || Sbjct: 1485 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 1427 Query: 287 tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 345 || || || | | ||||||||||||| ||| ||| |||||||| | ||||||||||| Sbjct: 1426 tagttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctttcggc 1367 Query: 346 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 405 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1366 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1307 Query: 406 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 465 |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||| Sbjct: 1306 tcggggcattggattcccaccaatgtttgcgttactcaagccgacattctcacttctgct 1247 Query: 466 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 525 ||||| || | | |||| | | |||||| |||| || ||||||||||||||||||| Sbjct: 1246 tcgtccacatctgttttcactgatgcttcaatctatagcagaacgctcccctaccgatgt 1187 Query: 526 attttgacatcccacagcttcggcagatcgctt 558 | || ||||||||||| ||||||| ||||||| Sbjct: 1186 acttaaacatcccacagtttcggcaaatcgctt 1154
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 270 bits (136), Expect = 5e-69 Identities = 136/136 (100%) Strand = Plus / Minus Query: 423 caccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgcttt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1109 caccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgcttt 1050 Query: 483 cgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacag 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 cgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacag 990 Query: 543 cttcggcagatcgctt 558 |||||||||||||||| Sbjct: 989 cttcggcagatcgctt 974
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Minus Query: 305 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 364 |||||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1408 caggaatattaacctgatagccatcgactacgcctttcggccttatcttaggacctgact 1349 Query: 365 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 424 |||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||| Sbjct: 1348 caccctccgtggacgagccttgcggaggaacccttagggtttcggggcattggattctca 1289 Query: 425 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcg 484 |||||||||||| ||||||||||||||||||| ||||||||||||| || || ||||||| Sbjct: 1288 ccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacacctgctttcg 1229 Query: 485 cggttgcttccctctaaggcggaacgctcccctaccg 521 | | |||||| | ||| ||||||||||||||||||| Sbjct: 1228 ctgatgcttcaccctagagcggaacgctcccctaccg 1192 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 258 cggctaacctagcctcctccgtccctc 284 |||||||||||||||||| |||||||| Sbjct: 1455 cggctaacctagcctccttcgtccctc 1429
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 256 bits (129), Expect = 7e-65 Identities = 255/297 (85%), Gaps = 10/297 (3%) Strand = Plus / Minus Query: 262 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 321 ||||||||||| ||||||||||| ||| | ||||||||||||||||||| |||| | Sbjct: 1490 taacctagcctactccgtccctcggta-----agggggtagtacaggaatattaacctat 1436 Query: 322 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 381 |||||||| |||| |||||| | |||||||||| ||||||||||||| |||||||||| Sbjct: 1435 tgtccatcaactaaacctttcagtatgatcttaggacctgactcaccctacgtggacgaa 1376 Query: 382 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 441 ||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1375 ccttgcgaaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1316 Query: 442 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 501 ||||||||||||||| |||| ||||| || ||| | ||| || | ||||||||| ||| Sbjct: 1315 caagccgacattctcacttctgcttcatccaccactgctcgtgcaggtgcttccctataa 1256 Query: 502 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 558 ||| ||||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 1255 ggcagaacgctcccctaccgatg-----ttacatcccacagcttcggcggatcgctt 1204 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||||||||||||||||||||| Sbjct: 1645 ctgtgttggtttcgggtacaggtaccctttt 1615
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 254 bits (128), Expect = 3e-64 Identities = 200/224 (89%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 1416 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 1357 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 1356 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 1297 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 479 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 1296 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 1237 Query: 480 tttcgcggttgcttccctctaaggcggaacgctcccctaccgat 523 || ||| | |||||| | ||| ||||||||||||||||||||| Sbjct: 1236 ttacgctgatgcttcaccctatagcggaacgctcccctaccgat 1193 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtac 26 ||||||||||||||||||||||||| Sbjct: 1626 ctgtgtcggtttcgggtacaggtac 1602
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 254 bits (128), Expect = 3e-64 Identities = 200/224 (89%) Strand = Plus / Plus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 114246 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 114305 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 114306 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 114365 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 479 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 114366 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 114425 Query: 480 tttcgcggttgcttccctctaaggcggaacgctcccctaccgat 523 || ||| | |||||| | ||| ||||||||||||||||||||| Sbjct: 114426 ttacgctgatgcttcaccctatagcggaacgctcccctaccgat 114469 Score = 254 bits (128), Expect = 3e-64 Identities = 200/224 (89%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 87742 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 87683 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 87682 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 87623 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 479 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 87622 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 87563 Query: 480 tttcgcggttgcttccctctaaggcggaacgctcccctaccgat 523 || ||| | |||||| | ||| ||||||||||||||||||||| Sbjct: 87562 ttacgctgatgcttcaccctatagcggaacgctcccctaccgat 87519 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtac 26 ||||||||||||||||||||||||| Sbjct: 114037 ctgtgtcggtttcgggtacaggtac 114061 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtac 26 ||||||||||||||||||||||||| Sbjct: 87951 ctgtgtcggtttcgggtacaggtac 87927
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1632 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1573 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1572 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1513 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 480 |||||||||||||||||||||||||||||||||||| ||||||||||||| || || || Sbjct: 1512 ctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtccacacctact 1453 Query: 481 ttcgcggttgcttccctctaaggcggaacgctcccctaccgat 523 |||| | |||||| | ||| ||||||||||||||||||||| Sbjct: 1452 ttcgttgatgcttcaccctagagcggaacgctcccctaccgat 1410 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 atcccacagcttcggcagatcgctt 558 ||||||||||||||||||| ||||| Sbjct: 1329 atcccacagcttcggcagaccgctt 1305
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1451 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 1392 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 1391 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 1332 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1331 ctcaccaatgttttcgttactcaagccgacattctcacttccgcgtcgtc 1282 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||||||||||||||| Sbjct: 1669 ctgtgtcggtttcgggtacaggta 1646
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3220 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 3161 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 3160 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 3101 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 3100 ctcaccaatgttttcgttactcaagccgacattctcacttccgcgtcgtc 3051 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||||||||||||||| Sbjct: 3438 ctgtgtcggtttcgggtacaggta 3415
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 244 bits (123), Expect = 3e-61 Identities = 229/264 (86%), Gaps = 4/264 (1%) Strand = Plus / Minus Query: 299 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 358 ||||||||||||||| |||||||||||||| | | | || || || || | |||||| | Sbjct: 1376 gtagtacaggaatataaacctgttgtccatcaattgcaccatttggtctcaccttaggtc 1317 Query: 359 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 418 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 1316 ctgactcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattgga 1257 Query: 419 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 478 ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || | | Sbjct: 1256 ttctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccacatctg 1197 Query: 479 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatt----ttgaca 534 ||| ||| |||||| ||||||||||||||||||||||||||| || | |||| Sbjct: 1196 cttacgctaatgcttctatctaaggcggaacgctcccctaccgatatcttataatagaca 1137 Query: 535 tcccacagcttcggcagatcgctt 558 |||||||||||||||||| ||||| Sbjct: 1136 tcccacagcttcggcagaccgctt 1113 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtac 26 ||||||||||||| ||||||||||| Sbjct: 1552 ctgtgtcggtttcaggtacaggtac 1528
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 242 bits (122), Expect = 1e-60 Identities = 158/170 (92%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1437 agtacaggaatattaacctgttttccatcgactacgcctttcggcctcgccttaggccct 1378 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1377 gactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1318 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1317 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1268 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 1682 ctgtgtcggtttcgggtacaggt 1660 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 gcggaacgctcccctaccgat 523 ||||||||||||||||||||| Sbjct: 1235 gcggaacgctcccctaccgat 1215
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 6e-59 Identities = 158/171 (92%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| || Sbjct: 1602 tagtacaggaatattaacctgttttccatcgacgacgcctttcggcctggccttaggtcc 1543 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1542 tgactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1483 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1482 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1432
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 234 bits (118), Expect = 2e-58 Identities = 217/250 (86%) Strand = Plus / Plus Query: 145 acttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccctt 204 |||||| || || ||||| ||||||||| || | |||| |||| |||||||||||||||| Sbjct: 2233 acttcaacgttgtagcgcctggtactcgaacattggcttgaggtattttctctacccctt 2292 Query: 205 cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaa 264 | ||| | ||||| |||| ||||||| ||||| |||| |||||||| |||| ||||| Sbjct: 2293 ttgaccgtaaaaaaataggggcaccttgcatccttgaaccgataaccatttttctgctaa 2352 Query: 265 cctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgt 324 ||||||||||||||| |||| | ||||||||| |||||||| |||||||| |||| |||| Sbjct: 2353 cctagcctcctccgtacctcgggaccaacaagaggtagtactggaatattcacctcttgt 2412 Query: 325 ccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacct 384 ||||||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 2413 ccatcgactacacctttcggcctaatcttaggccctaactcaccctccgtggatgaacct 2472 Query: 385 tgcggaggaa 394 |||||||||| Sbjct: 2473 tgcggaggaa 2482 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 403 ttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttcc 462 ||||| ||||||||||||||||||||||||| | ||| |||||||||||| ||||||| Sbjct: 2497 ttttcagggcattggattctcaccaatgtttgccttaaaaaagccgacattcccgcttcc 2556 Query: 463 gcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccga 522 || || || ||| | || || | |||||||||||||||||||||||||||||| ||| Sbjct: 2557 gcctcttccaccactactcgtgcaggtgcttccctctaaggcggaacgctcccctatcga 2616 Query: 523 tgcattttgacatcccacagcttcggcagatcgctt 558 ||||||||||||||||| |||||| |||||||||| Sbjct: 2617 tgcattttgacatcccatagcttcaacagatcgctt 2652 Score = 113 bits (57), Expect = 6e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 10 gtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggca 69 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2167 gtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctaggagtatggca 2226 Query: 70 t 70 | Sbjct: 2227 t 2227
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 234 bits (118), Expect = 2e-58 Identities = 217/249 (87%), Gaps = 2/249 (0%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||| Sbjct: 189405 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 189346 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 189345 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 189286 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||| |||| ||||||||||||||||||| | || ||| || ||||||| Sbjct: 189285 tcaccaatgttttcgctacttaagccgacattctcgcttctgttttgtccacacccgctt 189226 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 189225 tcgctaatgcttcaacctaatacagaacgctcccctaccgatg--tataaacatcccaca 189168 Query: 542 gcttcggca 550 ||||||||| Sbjct: 189167 gcttcggca 189159 Score = 234 bits (118), Expect = 2e-58 Identities = 217/249 (87%), Gaps = 2/249 (0%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||| Sbjct: 150962 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 150903 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 150902 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 150843 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||| |||| ||||||||||||||||||| | || ||| || ||||||| Sbjct: 150842 tcaccaatgttttcgctacttaagccgacattctcgcttctgttttgtccacacccgctt 150783 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 150782 tcgctaatgcttcaacctaatacagaacgctcccctaccgatg--tataaacatcccaca 150725 Query: 542 gcttcggca 550 ||||||||| Sbjct: 150724 gcttcggca 150716 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||| ||||||||||| Sbjct: 189616 ctgtgtcggtttagggtacaggta 189593
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 |||||||||||| || ||||||| |||||||||| |||| |||||| |||||||||| || Sbjct: 1823 tagtacaggaatgtt-acctgttatccatcgactgcgccattcggcttgatcttaggtcc 1765 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 |||||||||| ||||||||||||||||| ||||| |||| ||||||| ||||||||||| Sbjct: 1764 tgactcaccccacgtggacgaaccttgcgtaggaatccttaggttttcagggcattggat 1705 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 479 |||||||||||||| |||||||||||||||||||||| ||||||| ||||| || || || Sbjct: 1704 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcctcgtccacacctgc 1645 Query: 480 tttcgcggttgcttccctctaaggcggaacgctcccctaccgat 523 || ||| |||||| ||||| ||||||||||||||||||||| Sbjct: 1644 ttacgctaatgcttcgatctaacgcggaacgctcccctaccgat 1601 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||| |||||||||| Sbjct: 1981 ctgtgtcggtttctggtacaggta 1958
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 228 bits (115), Expect = 2e-56 Identities = 212/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||||| | Sbjct: 58146 ctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttcctgaaa 58205 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| | ||||||||||| | || || ||||| ||||||||||| |||| Sbjct: 58206 gtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtggtaaagc 58260 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 58261 aatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggaccttggc 58320 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 58321 ttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgtccttaa 58379 Query: 242 acc 244 ||| Sbjct: 58380 acc 58382 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 498 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 544 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 58745 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 58791
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 228 bits (115), Expect = 2e-56 Identities = 212/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||||| | Sbjct: 135357 ctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttcctgaaa 135416 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaagc 121 ||||||||| | ||||||||||| | || || ||||| ||||||||||| |||| Sbjct: 135417 gtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtggtaaagc 135471 Query: 122 aattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggacctcggc 181 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135472 aatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggaccttggc 135531 Query: 182 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtccttaa 241 | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135532 ttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgtccttaa 135590 Query: 242 acc 244 ||| Sbjct: 135591 acc 135593 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 498 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 544 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 135956 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 136002
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| |||||||| | | ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 3241 gtacgggaatattaatccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3182 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 3181 actcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattc 3122 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||| ||||||||||||||||||| |||||| |||||| || | | ||| Sbjct: 3121 tcaccaatgttttcgctactcaagccgacattctcacttccgtttcgtccacactcactt 3062 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 || |||||| | ||| | ||||||||||||||||||||| Sbjct: 3061 acgttagtgcttcaccctatgacggaacgctcccctaccgatg 3019
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 6e-56 Identities = 195/222 (87%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| ||| Sbjct: 1494 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1435 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1434 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1375 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 480 |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || Sbjct: 1374 ctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtccacccccact 1315 Query: 481 ttcgcggttgcttccctctaaggcggaacgctcccctaccga 522 | || | ||||| | | | |||||||||||||||||||| Sbjct: 1314 tccgtgaaagcttcacccgagagcggaacgctcccctaccga 1273
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1407 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1348 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1347 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1288 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1287 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1238 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 atcccacagcttcggcagatc 554 ||||||||||||||||||||| Sbjct: 1171 atcccacagcttcggcagatc 1151
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 26216 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 26157 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 26156 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 26097 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 26096 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 26047 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 534 atcccacagcttcggcagatc 554 ||||||||||||||||||||| Sbjct: 25980 atcccacagcttcggcagatc 25960
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 224 bits (113), Expect = 2e-55 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand = Plus / Minus Query: 235 tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 294 ||||| ||||||||||||| ||| || ||||||||||| ||||||||||| | | | Sbjct: 1497 tcctttaacctataaccatattttggttaacctagcctactccgtccctcggga-----a 1443 Query: 295 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 ||||||||| ||||||||| |||| ||||||||| |||| |||||| | |||||||| Sbjct: 1442 gggggtagtataggaatattaacctattgtccatcaactaaacctttcagtatgatctta 1383 Query: 355 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 414 || ||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 1382 ggacctgactcaccctacgtggacgaaccttgcgaaggaacccttaggttttcggggcat 1323 Query: 415 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttc 467 ||||||||||||||||||| |||||||||||||||||||||| |||| ||||| Sbjct: 1322 tggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttc 1270 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| ||||| |||||||||||||||||| Sbjct: 1638 ctgtgttggttttgggtacaggtaccctttt 1608 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 ttcgagcttttcctgggagtatggcat 70 |||||||||||||||||||||| |||| Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 gctcgaggcattttctctaccccttc 205 ||||||||||||||||||||| |||| Sbjct: 1534 gctcgaggcattttctctacctcttc 1509 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 499 taaggcggaacgctcccctaccgat 523 |||||| |||||||||||||||||| Sbjct: 1228 taaggcagaacgctcccctaccgat 1204
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||| || Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1326 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||| |||||||||| Sbjct: 1712 ctgtgtcggtttcaggtacaggta 1689
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||| || Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1326 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||| |||||||||| Sbjct: 1712 ctgtgtcggtttcaggtacaggta 1689
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 218 bits (110), Expect = 1e-53 Identities = 215/249 (86%), Gaps = 2/249 (0%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| |||||||||||||| |||| |||| |||||| |||| Sbjct: 190328 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 190269 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 190268 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 190209 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||| |||| |||||||||||||| |||| | || ||| || ||||||| Sbjct: 190208 tcaccaatgttttcgctacttaagccgacattctcacttctgttttgtccacacccgctt 190149 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 190148 tcgctaatgcttcaaactaatacagaacgctcccctaccgatg--tataaacatcccaca 190091 Query: 542 gcttcggca 550 ||||||||| Sbjct: 190090 gcttcggca 190082 Score = 218 bits (110), Expect = 1e-53 Identities = 215/249 (86%), Gaps = 2/249 (0%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| |||||||||||||| |||| |||| |||||| |||| Sbjct: 151755 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 151696 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 151695 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 151636 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 481 ||||||||||||||| |||| |||||||||||||| |||| | || ||| || ||||||| Sbjct: 151635 tcaccaatgttttcgctacttaagccgacattctcacttctgttttgtccacacccgctt 151576 Query: 482 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 541 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 151575 tcgctaatgcttcaaactaatacagaacgctcccctaccgatg--tataaacatcccaca 151518 Query: 542 gcttcggca 550 ||||||||| Sbjct: 151517 gcttcggca 151509
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 154/169 (91%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| |||||||| ||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 1894 gtacgggaatattaacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 1835 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 1834 actaaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattt 1775 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1774 tcaccaatgttttcgctactcaagccgacattctcacttccgtttcgtc 1726
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 214 bits (108), Expect = 2e-52 Identities = 177/200 (88%) Strand = Plus / Minus Query: 324 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 383 |||||||||||||| |||| |||| |||||| |||||||||||||||| ||||||||| Sbjct: 2936 tccatcgactacgcttttcagcctcgccttaggtcctgactcaccctccgcggacgaacc 2877 Query: 384 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 443 || | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2876 ttccagaggaaaccttaggttttcggggcattggattctcaccaatgttttcgctactca 2817 Query: 444 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 503 ||||||||||||| |||| |||||||| || ||||||| ||| |||||| ||||| | Sbjct: 2816 agccgacattctcacttctgcttcgtccacacccgcttacgctaatgcttcaatctaatg 2757 Query: 504 cggaacgctcccctaccgat 523 | |||||||||||||||||| Sbjct: 2756 cagaacgctcccctaccgat 2737 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacagg 23 |||||||||||||||||||||| Sbjct: 3169 ctgtgtcggtttcgggtacagg 3148
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 214 bits (108), Expect = 2e-52 Identities = 217/251 (86%), Gaps = 3/251 (1%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| |||||||||||||| | ||||||||||||||| || ||||| || Sbjct: 3096 tagtacaggaatattaacctgttgtccatcaattacgcctttcggcctcattttaggtcc 3037 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| ||||||||||||||| |||| | |||||| |||| ||||| ||||||||||||| Sbjct: 3036 tgactaaccctccgtggacgagccttccagaggaatccttaggtttccggggcattggat 2977 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 479 ||||||||||||||||| ||||||||||||||||||| |||| |||| ||| || || | Sbjct: 2976 tctcaccaatgttttcgctactcaagccgacattctcacttctgctttgtccacatccac 2917 Query: 480 tttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatccca 539 ||||| |||||| |||||| | |||||||||||||||||||||| |||||||| Sbjct: 2916 tttcgttaatgcttcaatctaag-cagaacgctcccctaccgatgcataa--acatccca 2860 Query: 540 cagcttcggca 550 ||| ||||||| Sbjct: 2859 cagattcggca 2849 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||| ||||||||||| Sbjct: 3305 ctgtgtcggtttagggtacaggta 3282
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 212 bits (107), Expect = 9e-52 Identities = 116/119 (97%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 814516 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 814457 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaag 120 ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 814456 gtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgtggagaag 814398 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 295 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 354 |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 9725496 aggggtagtacaggtatattgacatgttgtccatcgactacgcctttcagcctgatctta 9725437 Query: 355 ggccctgactcaccctccgtggacgaaccttgcgg 389 ||||||||||||||||||||||||||||||||||| Sbjct: 9725436 ggccctgactcaccctccgtggacgaaccttgcgg 9725402 Score = 42.1 bits (21), Expect = 1.9 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 109 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 150 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 212 bits (107), Expect = 9e-52 Identities = 116/119 (97%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23724 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 23665 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaag 120 ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 23664 gtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgtggagaag 23606
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 212 bits (107), Expect = 9e-52 Identities = 116/119 (97%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttcctggga 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 92647 ctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttttcctggga 92588 Query: 62 gtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtggagaag 120 ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92587 gtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgtggagaag 92529
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 137909 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 137850 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||| ||||| ||||||| |||| |||||||||||||||||||| Sbjct: 137849 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 137790 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| || ||||||||| ||||||||| ||||||||||||| Sbjct: 137789 ctcaccaatgtttgcgctactcaagctgacattctcacttccgcttcgtc 137740 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 47635 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 47694 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||| ||||| ||||||| |||| |||||||||||||||||||| Sbjct: 47695 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 47754 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| || ||||||||| ||||||||| ||||||||||||| Sbjct: 47755 ctcaccaatgtttgcgctactcaagctgacattctcacttccgcttcgtc 47804 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||| ||||||||||| Sbjct: 138141 ctgtgtcggtttagggtacaggta 138118 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||| ||||||||||| Sbjct: 47403 ctgtgtcggtttagggtacaggta 47426
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| || Sbjct: 1559 agtacaggaatattaacctgttttccatcgactacgcctttcggcctggccttaggtccc 1500 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1499 gactaaccccccatggacgagcctagtggaggaagccttaggttttcggggcattggatt 1440 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1439 ctcaccaatgttttcgttactcaagccgacattctcacttccgctt 1394 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||||||||| |||| Sbjct: 1802 ctgtgtcggtttcgggtacgggta 1779
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||| |||||||||||||||||| ||||| ||| Sbjct: 1401 agtacaggaatattaacctgttttccatcaactacgcctttcggcctggctttaggtcct 1342 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| ||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1341 gactaaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1282 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 ||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 1281 ctcaccaatgtttgcgttactcaagccgacattctcacttccgctt 1236 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgat 523 |||||||||||||||||||| Sbjct: 1198 cggaacgctcccctaccgat 1179
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| |||||| |||||||||||||| |||| |||| |||||||||| Sbjct: 3164 agtacaggaatattaacctgtcatccatcgactacgcttttcagcctcgccttaggccct 3105 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 3104 gactcaccctccgtggacgaaccttccagaggaaaccttaggttttcggggcattggatt 3045 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 |||||||||||||||| |||| |||||||||||||| |||| |||| Sbjct: 3044 ctcaccaatgttttcgctacttaagccgacattctcacttctgctt 2999 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 3374 ctgtgtcggtttcgggtacaggt 3352 Score = 46.1 bits (23), Expect = 0.12 Identities = 40/45 (88%), Gaps = 3/45 (6%) Strand = Plus / Minus Query: 506 gaacgctcccctaccgatgcattttgacatcccacagcttcggca 550 ||||||||||||||||||| || ||||||||||||||||||| Sbjct: 2960 gaacgctcccctaccgatg---ttaaacatcccacagcttcggca 2919
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 150948 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 151007 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 151008 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 151067 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 151068 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 151116 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 43255 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 43196 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 43195 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 43136 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43135 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 43087
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 208 bits (105), Expect = 1e-50 Identities = 224/263 (85%), Gaps = 3/263 (1%) Strand = Plus / Minus Query: 299 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 358 |||||||||||||||| ||||||| ||||||||||||||| || ||| | | |||||| Sbjct: 1380 gtagtacaggaatattaacctgttatccatcgactacgccgtttggctttaccttaggtt 1321 Query: 359 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 418 |||||||||||| || ||||||||||| || ||||| |||||||||||||||||| |||| Sbjct: 1320 ctgactcaccctacgcggacgaaccttccgtaggaatccttgggttttcggggcactgga 1261 Query: 419 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 478 ||||||||| ||||| |||||||||||||||||||||| ||||||||| ||| || || Sbjct: 1260 ttctcaccagtgtttgcgttactcaagccgacattctcacttccgctttgtccacattcg 1201 Query: 479 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg---cattttgacat 535 ||| ||| |||||| |||| |||||||||||||||||||||| |||| |||| Sbjct: 1200 cttacgctagtgcttcaacctaatgcggaacgctcccctaccgatgttatatttaaacat 1141 Query: 536 cccacagcttcggcagatcgctt 558 | ||||||||||||||| ||||| Sbjct: 1140 ctcacagcttcggcagaccgctt 1118
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 1427 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 1368 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 1367 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 1308 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1307 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1259
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||| |||||||| |||||| ||||||| || Sbjct: 1443 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctggtcttaggtcc 1384 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1383 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1324 Query: 420 tctcaccaatgttttcgttactcaagccgacattctc 456 ||||||||||||||||||||||||||||||||||||| Sbjct: 1323 tctcaccaatgttttcgttactcaagccgacattctc 1287 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||| |||||||||| Sbjct: 1661 ctgtgtcggtttcaggtacaggta 1638
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 206 bits (104), Expect = 6e-50 Identities = 146/160 (91%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 1412 gtacaggaattttgacctgttgtccatcgactacgcctttcggcatcatcttaggccctg 1353 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||||||||| ||||||||| |||| || ||||| |||| |||||||||||||| |||||| Sbjct: 1352 actcacccttcgtggacgagccttccgaaggaacccttaggttttcggggcatgggattc 1293 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| | |||| |||||||||||||||||||||| |||| Sbjct: 1292 tcacccacgtttgcgttactcaagccgacattctcacttc 1253
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2034 agtacaggaatattaacctgttttccatcgactacgccattcggcctcgccttaggccct 1975 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||| || ||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 1974 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1915 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1914 ctcaccaatgttttcgttactcaagccaacattctcacttccg 1872
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||| ||| Sbjct: 1480 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctaatcttaggtcct 1421 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || ||||||||||| | ||||||| || |||||||||||||||||||| Sbjct: 1420 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 1361 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 | |||||||||||||||||||||||||||||||||| |||||| Sbjct: 1360 cacaccaatgttttcgttactcaagccgacattctcacttccg 1318 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgat 523 |||||||||||||||||||| Sbjct: 1278 cggaacgctcccctaccgat 1259
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 2e-49 Identities = 157/175 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| |||||| ||||||||| |||||||||||||| ||||||| ||| Sbjct: 1670 agtacaggaatattcgcctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1611 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1610 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1551 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 ||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| Sbjct: 1550 ctcaccaatgttttcgttacttaagccgacattctcacttccgcttcgtccaccc 1496
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 9e-49 Identities = 147/162 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||||| ||||||||||||||| |||||| ||| Sbjct: 1581 agtacaggaatattaacctgtttgccatcgacgacgcctttcggcctggccttaggtcct 1522 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1521 gactcaccccccacggacgaacctggtggaggaacccttaggttttcggggcattggatt 1462 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttcc 462 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1461 ctcaccaatgttttcgttactcaagccgacattctcacttcc 1420
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 5e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||| ||||| || |||||||||||||| || Sbjct: 3599 tagtacaggaatattaacctgttttccatcgacgacgccgtttggcctgatcttaggtcc 3540 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 3539 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 3480 Query: 420 tctcaccaatgttttcgttactcaagccgac 450 ||||||||||||||||||||||||||||||| Sbjct: 3479 tctcaccaatgttttcgttactcaagccgac 3449 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||| |||||||||| Sbjct: 3816 ctgtgtcggtttcaggtacaggta 3793
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 196 bits (99), Expect = 5e-47 Identities = 153/171 (89%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||| || Sbjct: 1539 tagtacaggaatattcacctgtttgccatcgactgcgcctttcggcctggccttaggtcc 1480 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||| ||| |||||| ||| ||| |||| |||| ||||||||||||||||||| Sbjct: 1479 tgactaacccaccgcggacgaccctaccggtggaacccttaggttttcggggcattggat 1420 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1419 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1369
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 194 bits (98), Expect = 2e-46 Identities = 104/106 (98%) Strand = Plus / Minus Query: 30 tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 89 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821 Query: 90 cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 135 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||| ||||| || ||| ||||||||||||||||||| |||||||| |||||| ||| Sbjct: 1028 agtacgggaattttaacccgttgtccatcgactacgccgttcggcctcgccttaggtcct 969 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||||||| |||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 968 gactaaccctccggggacgaacctggcggaggaaaccttagggtttcggggcattggatt 909 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| || ||||||||||||||||||| |||||| |||||| Sbjct: 908 ctcaccaatgtttgcgctactcaagccgacattctcacttccgtttcgtc 859 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||||||||||||||| Sbjct: 1237 ctgtgtcggtttcgggtacaggta 1214 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgat 523 |||||||||||||||||||| Sbjct: 824 cggaacgctcccctaccgat 805
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 194 bits (98), Expect = 2e-46 Identities = 146/162 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||||||||||| |||||||| |||||| ||| Sbjct: 1484 agtacaggaatattaacctgtttgccatcgactacgccgttcggcctcgccttaggtcct 1425 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || ||||||| ||||| ||||||| |||| ||||| |||||||||||||| Sbjct: 1424 gactcaccccccatggacgagccttgtggaggaacccttaggtttccggggcattggatt 1365 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttcc 462 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1364 ctcaccaatgttttcgttactcaagccgacattctcacttcc 1323 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 atcccacagcttcggcagatcgctt 558 ||||||||||||||||||| ||||| Sbjct: 1185 atcccacagcttcggcagaccgctt 1161
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||||||||| |||||||| ||| |||||| ||| Sbjct: 1464 agtacaggaatattaacctgttctccatcgactacacctttcggtctggccttaggtcct 1405 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| ||||| | ||||||||||| | ||||| |||| |||||||||||||||||||| Sbjct: 1404 gactaacccttcatggacgaacctagtaaaggaacccttaggttttcggggcattggatt 1345 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1344 ctcaccaatgttttcgttactcaagccgacattctcacttccgctt 1299 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||||||||||||||| Sbjct: 1717 ctgtgtcggtttcgggtacaggta 1694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 gcggaacgctcccctaccgat 523 ||||||||||||||||||||| Sbjct: 1262 gcggaacgctcccctaccgat 1242 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 atcccacagcttcggcagatcgctt 558 ||||||||||||||||||| ||||| Sbjct: 1192 atcccacagcttcggcagaccgctt 1168
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 192 bits (97), Expect = 9e-46 Identities = 145/161 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacattctcacttc 1542
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 192 bits (97), Expect = 9e-46 Identities = 145/161 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacattctcacttc 1542
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 170075 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 170134 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 170135 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 170194 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 480 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 170195 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 170254 Query: 481 ttcgcggttgcttccctctaaggcggaacgctcccctacc 520 | || | ||||| | || |||||||||||||||||||| Sbjct: 170255 tccggaatagcttctccctcaggcggaacgctcccctacc 170294 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 122851 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 122792 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 122791 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 122732 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 480 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 122731 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 122672 Query: 481 ttcgcggttgcttccctctaaggcggaacgctcccctacc 520 | || | ||||| | || |||||||||||||||||||| Sbjct: 122671 tccggaatagcttctccctcaggcggaacgctcccctacc 122632 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 169821 ctgtgtcggtttcgggtacaggt 169843 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 123105 ctgtgtcggtttcgggtacaggt 123083
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 154770 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 154829 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || |||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 154830 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 154889 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 154890 ctcaccaatgttttcgttactcaagccgacattctcacttccgc 154933 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 79122 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 79063 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || |||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 79062 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 79003 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79002 ctcaccaatgttttcgttactcaagccgacattctcacttccgc 78959
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 190 bits (96), Expect = 3e-45 Identities = 144/160 (90%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || | Sbjct: 1666872 gtacaggaatattgacctgttatccatcgactacgcctttcggcctgaccttaggaccag 1666813 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 1666812 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1666753 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 1666752 tcacccatgttttcgctactcaagccgacattctcacttc 1666713
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1587 agtacaggaatataaacctgtttgccatcgactacgcctgtcggcctcgccttaggtcct 1528 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||| | ||||||||||||| ||||| |||| |||||||||||||||||||| Sbjct: 1527 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcggggcattggatt 1468 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 464 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1467 ctcaccaatgttttcgttactcaagccgacattctcgctcccgc 1424
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 1442 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 1383 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 1382 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 1323 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 480 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 1322 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 1263 Query: 481 ttcgcggttgcttccctctaaggcggaacgctcccctacc 520 | || | ||||| | || |||||||||||||||||||| Sbjct: 1262 tccggaatagcttctccctcaggcggaacgctcccctacc 1223 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 1696 ctgtgtcggtttcgggtacaggt 1674
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 188 bits (95), Expect = 1e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| || Sbjct: 7149 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 7090 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||||||||| | ||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 7089 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 7030 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 |||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 7029 tctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 6983
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||| Sbjct: 193281 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 193222 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||| | ||||||||||||| ||||| |||| |||||||||| ||||||||| Sbjct: 193221 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 193162 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 ||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 193161 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcgtcgtcaaccc 193107 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||| Sbjct: 143501 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 143560 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||||||||| | ||||||||||||| ||||| |||| |||||||||| ||||||||| Sbjct: 143561 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 143620 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 ||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 143621 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcgtcgtcaaccc 143675 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 193501 ctgtgtcggtttcgggtacaggt 193479 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 143281 ctgtgtcggtttcgggtacaggt 143303
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 188 bits (95), Expect = 1e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| || Sbjct: 1500 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 1441 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||||||||| | ||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 1440 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 1381 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 466 |||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 1380 tctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 1334
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 188 bits (95), Expect = 1e-44 Identities = 101/103 (98%) Strand = Plus / Minus Query: 134 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 15834 Query: 194 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 236 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15833 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 15791
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2896 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 2837 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 2836 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 2777 Query: 421 ctcaccaatgttttcgttactcaagccgac 450 |||||||||||||||||||||||||||||| Sbjct: 2776 ctcaccaatgttttcgttactcaagccgac 2747
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 186 bits (94), Expect = 5e-44 Identities = 188/213 (88%), Gaps = 6/213 (2%) Strand = Plus / Minus Query: 352 ttaggccctgactcaccctccgtggacgaacc-ttgcggaggaaaccttgggttttcggg 410 ||||||| |||||||||||||||||||||||| ||| ||||||| | || |||||||||| Sbjct: 1401 ttaggccttgactcaccctccgtggacgaacctttggggaggaacctttaggttttcggg 1342 Query: 411 gcattggattctcacc-aatgtttt-cgttactcaagccgacattc-tcgcttccgcttc 467 ||||| |||||||||| |||||||| |||||||||||||||||||| | | ||||| ||| Sbjct: 1341 gcattagattctcaccaaatgttttgcgttactcaagccgacattcttggtttccgtttc 1282 Query: 468 gtcgaccccc--gctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 525 ||| | |||| | | ||||| || |||| | ||||||||||||||||||||||||||| Sbjct: 1281 gtccaaccccttgttcgcgcgggtgtttccttttaaggcggaacgctcccctaccgatgc 1222 Query: 526 attttgacatcccacagcttcggcagatcgctt 558 ||||| ||||||||||||||||||||||||||| Sbjct: 1221 atttttacatcccacagcttcggcagatcgctt 1189
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 186 bits (94), Expect = 5e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||| |||||||||||| |||||||||||||||||||||||||||| |||||| || Sbjct: 2333412 agtactggaatattgaccagttgtccatcgactacgcctttcggcctcgccttaggtccc 2333471 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| ||||| || |||||| |||| || ||||| ||||||| ||||||||||||||||| Sbjct: 2333472 gactaacccttcgcggacgagccttccgaaggaacccttggggtttcggggcattggatt 2333531 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||||||||||||| ||||||||||| ||||||| |||| |||||||| Sbjct: 2333532 ctcaccaatgttttcgctactcaagccggcattctcacttctgcttcgtc 2333581 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||||||||| |||| Sbjct: 2333203 ctgtgtcggtttcgggtacgggta 2333226
>emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL gene, exon 2 Length = 655 Score = 186 bits (94), Expect = 5e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 150 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 91 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 90 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 31 Query: 421 ctcaccaatgttttcgttactcaagccgac 450 |||||||||||||||||||||||||||||| Sbjct: 30 ctcaccaatgttttcgttactcaagccgac 1
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 3149 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 3090 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 3089 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 3030 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 3029 tcacctatattttcgttactcaagccgacattctcacttctgcttcgtc 2981
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| |||| Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| |||||| Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1341 tcaccgatgttttcgttactcaagccgacattctcacttccgcctcgtc 1293
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1659901 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1659842 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1659841 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1659782 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1659781 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1659733 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1048843 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1048902 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1048903 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1048962 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1048963 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1049011
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1669 agtacaggaatattaacctgttttccatcgactacgccgctcggcctcgccttaggtcct 1610 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||| || ||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 1609 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1550 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttc 461 |||||||||||||||||||||||| || ||||||||||||| Sbjct: 1549 ctcaccaatgttttcgttactcaaaccaacattctcgcttc 1509
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1663 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1604 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1603 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1544 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1543 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1495
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| |||| Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| |||||| Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1341 tcaccgatgttttcgttactcaagccgacattctcacttccgcctcgtc 1293
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 2656885 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 2656944 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 2656945 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 2657004 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 2657005 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 2657053 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 572036 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 571977 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 571976 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 571917 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 571916 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 571868
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 182 bits (92), Expect = 8e-43 Identities = 143/160 (89%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| |||||||| ||| |||||||||||||||||||||||||||| |||||| || | Sbjct: 1025 gtacgggaatattaacccgttgtccatcgactacgcctttcggcctcgccttaggtcccg 966 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| |||||||| |||| || |||||||||||||||||| Sbjct: 965 actaaccctccgcggacgagccttccggaggaacccttagggtttcggggcattggattc 906 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||||||||||||| ||||||||||||||||||| |||| Sbjct: 905 tcaccaatgttttcgctactcaagccgacattctcacttc 866
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 182 bits (92), Expect = 8e-43 Identities = 146/164 (89%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||| || Sbjct: 1469 tagtacaggaatattaacctgtttgccatcgacgacgcctttcggcctagccttagggcc 1410 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 |||||||||| || ||||||||||| | ||||||| || ||||||||||||||||||| Sbjct: 1409 tgactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggat 1350 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 ||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 1349 tctaaccaatgttttcgttactcaagccgacattctcacttccg 1306 Score = 40.1 bits (20), Expect = 7.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcag 551 ||||||||||||||||||| ||||| | || |||||||||||||| Sbjct: 1265 cggaacgctcccctaccgacatatttttatgtctcacagcttcggcag 1218
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 180 bits (91), Expect = 3e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||||| || ||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 3003 agtacaggaatcttaacctgttttccatcgactacgcctttcggccttgccttaggtcct 2944 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||| || ||||||||||| | ||||||| || |||||||||||||||||||| Sbjct: 2943 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 2884 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 || |||||||||||||||||||||||| |||||||| |||||| Sbjct: 2883 cttaccaatgttttcgttactcaagccaacattctcacttccg 2841 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgat 523 |||||||||||||||||||| Sbjct: 2800 cggaacgctcccctaccgat 2781
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 180 bits (91), Expect = 3e-42 Identities = 142/159 (89%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||| || | |||||||| ||||||| ||||||||||| ||| ||||||| ||| Sbjct: 1873 agtacaggattagtaacctgttgcccatcgaatacgcctttcgaccttttcttaggacct 1814 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1813 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1754 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgct 459 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1753 ctcaccaatgttttcgttactcaagccgacattctcgct 1715
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 180 bits (91), Expect = 3e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||| || Sbjct: 2875 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 2816 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 2815 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 2756 Query: 420 tctcaccaatgttttcgttactcaagccgac 450 ||||||||||||||||||||||||||||||| Sbjct: 2755 tctcaccaatgttttcgttactcaagccgac 2725 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||| |||||||||| Sbjct: 3091 ctgtgtcggtttcaggtacaggta 3068
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 180 bits (91), Expect = 3e-42 Identities = 191/223 (85%), Gaps = 1/223 (0%) Strand = Plus / Minus Query: 317 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 376 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 1385 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1326 Query: 377 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 436 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 1325 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1266 Query: 437 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 496 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 1265 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 1206 Query: 497 tctaaggcggaacgctcccctaccgatgcattttgacatccca 539 || ||||||||||||||||||||||| |||| |||||||| Sbjct: 1205 cctgccgcggaacgctcccctaccgatgc-tttttacatccca 1164
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 180 bits (91), Expect = 3e-42 Identities = 191/223 (85%), Gaps = 1/223 (0%) Strand = Plus / Minus Query: 317 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 376 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 1398 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1339 Query: 377 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 436 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 1338 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1279 Query: 437 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 496 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 1278 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 1219 Query: 497 tctaaggcggaacgctcccctaccgatgcattttgacatccca 539 || ||||||||||||||||||||||| |||| |||||||| Sbjct: 1218 cctgccgcggaacgctcccctaccgatgc-tttttacatccca 1177
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 180 bits (91), Expect = 3e-42 Identities = 191/223 (85%), Gaps = 1/223 (0%) Strand = Plus / Minus Query: 317 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 376 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 5972 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 5913 Query: 377 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 436 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 5912 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 5853 Query: 437 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 496 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 5852 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 5793 Query: 497 tctaaggcggaacgctcccctaccgatgcattttgacatccca 539 || ||||||||||||||||||||||| |||| |||||||| Sbjct: 5792 cctgccgcggaacgctcccctaccgatgc-tttttacatccca 5751
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 180 bits (91), Expect = 3e-42 Identities = 169/195 (86%) Strand = Plus / Plus Query: 267 tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 326 |||||| ||||||||||| || |||||| |||||| |||||||| ||| ||||||| Sbjct: 38992 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 39051 Query: 327 atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 386 || |||||||||||||||| |||||| ||||||| |||||||| |||||| |||| Sbjct: 39052 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 39111 Query: 387 cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 446 |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 39112 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 39171 Query: 447 cgacattctcgcttc 461 |||||||||| |||| Sbjct: 39172 cgacattctcacttc 39186 Score = 180 bits (91), Expect = 3e-42 Identities = 169/195 (86%) Strand = Plus / Minus Query: 267 tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 326 |||||| ||||||||||| || |||||| |||||| |||||||| ||| ||||||| Sbjct: 20408 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 20349 Query: 327 atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 386 || |||||||||||||||| |||||| ||||||| |||||||| |||||| |||| Sbjct: 20348 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 20289 Query: 387 cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 446 |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20288 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 20229 Query: 447 cgacattctcgcttc 461 |||||||||| |||| Sbjct: 20228 cgacattctcacttc 20214
>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2 Length = 659 Score = 180 bits (91), Expect = 3e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||| || Sbjct: 151 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 92 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 91 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 32 Query: 420 tctcaccaatgttttcgttactcaagccgac 450 ||||||||||||||||||||||||||||||| Sbjct: 31 tctcaccaatgttttcgttactcaagccgac 1 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||| |||||||||| Sbjct: 367 ctgtgtcggtttcaggtacaggta 344
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| ||||| |||||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 114014 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 114073 Query: 362 actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 420 ||||||||| ||||||||| |||| || | |||| |||| |||||||||||||||||||| Sbjct: 114074 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 114133 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 |||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 114134 ctcaccaatgttttcgctactcaagccgacattctcacttccg 114176 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| ||||| |||||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 3503 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3444 Query: 362 actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 420 ||||||||| ||||||||| |||| || | |||| |||| |||||||||||||||||||| Sbjct: 3443 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 3384 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 |||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 3383 ctcaccaatgttttcgctactcaagccgacattctcacttccg 3341 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 cggaacgctcccctaccgatg 524 ||||||||||||||||||||| Sbjct: 114217 cggaacgctcccctaccgatg 114237 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgatg 524 ||||||||||||||||||||| Sbjct: 3300 cggaacgctcccctaccgatg 3280
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||||| |||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 1430 agtacaggaatgttgacctgtttgccatcgactacacctttcggtcttgccttaggtcct 1371 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| ||||||| ||||||||||||| | ||||| |||| ||||||||||||| ||||| Sbjct: 1370 gactaaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcaaaggatt 1311 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1310 ctcaccgatgttttcgttactcaaaccgacattctcacttccgcttcgtc 1261
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 178 bits (90), Expect = 1e-41 Identities = 147/166 (88%) Strand = Plus / Minus Query: 305 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 364 ||||||| |||||||| | ||||||||||| |||||||| || |||||| ||||||| Sbjct: 1390 caggaatgttgacctgcttgccatcgactacacctttcggtcttgccttaggtcctgact 1331 Query: 365 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 424 ||||||| ||||||||||| | | ||||| |||| |||||||||||||||||||||||| Sbjct: 1330 aaccctccatggacgaacctagtgaaggaacccttaggttttcggggcattggattctca 1271 Query: 425 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1270 ccaatgttttcgttactcaaaccgacattctcacttccgcttcgtc 1225 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 503 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggca 550 ||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 1192 gcggaacgctcccctaccgatatcttacgatatcccacagcttcggca 1145
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||||| |||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 3168 agtacaggaatgttgacctgtttgccatcgactacacctttcggtcttgccttaggtcct 3109 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| ||||||| ||||||||||||| | ||||| |||| ||||||||||||| ||||| Sbjct: 3108 gactaaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcaaaggatt 3049 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 3048 ctcaccgatgttttcgttactcaaaccgacattctcacttccgcttcgtc 2999
>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA Length = 212 Score = 178 bits (90), Expect = 1e-41 Identities = 121/130 (93%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 340 ttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacctt 399 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 64 ttcggcctgatgataggccctgactcaccctccgtggac-aaccttgcggaggaaccctt 122 Query: 400 gggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgct 459 |||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 123 aggttttcgaggcattggattctcaccaacgtttgcgttactcaagccgacattctcgct 182 Query: 460 tccgcttcgt 469 |||| ||||| Sbjct: 183 tccgattcgt 192
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome Length = 119704 Score = 176 bits (89), Expect = 5e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 48953 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 49012 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 49013 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 49072 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 49073 ccacctatattttcgttactcaagccgacattctcacttctgcttcgtc 49121 Score = 176 bits (89), Expect = 5e-41 Identities = 149/169 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 5406 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 5347 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 5346 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 5287 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 |||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 5286 ccacctatattttcgttactcaagccgacattctcacttctgcttcgtc 5238
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 176 bits (89), Expect = 5e-41 Identities = 192/225 (85%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 237 cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 296 |||||||| ||||||| | ||||||| ||||||| ||||||||| | ||||||||| Sbjct: 17574 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 17633 Query: 297 gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 356 |||||||||||||| ||||||| |||||||| ||||| || | ||| | |||||| Sbjct: 17634 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 17692 Query: 357 ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 416 |||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 17693 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 17752 Query: 417 gattctcaccaatgttttcgttactcaagccgacattctcgcttc 461 |||||||||||||||||||| ||||||||| |||||||| |||| Sbjct: 17753 gattctcaccaatgttttcgctactcaagctaacattctcacttc 17797 Score = 176 bits (89), Expect = 5e-41 Identities = 192/225 (85%), Gaps = 1/225 (0%) Strand = Plus / Minus Query: 237 cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 296 |||||||| ||||||| | ||||||| ||||||| ||||||||| | ||||||||| Sbjct: 3292 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 3233 Query: 297 gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 356 |||||||||||||| ||||||| |||||||| ||||| || | ||| | |||||| Sbjct: 3232 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 3174 Query: 357 ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 416 |||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 3173 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 3114 Query: 417 gattctcaccaatgttttcgttactcaagccgacattctcgcttc 461 |||||||||||||||||||| ||||||||| |||||||| |||| Sbjct: 3113 gattctcaccaatgttttcgctactcaagctaacattctcacttc 3069 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||| ||||||||||| Sbjct: 17427 ctgtgtcggtttagggtacaggta 17450 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 |||||||||||| ||||||||||| Sbjct: 3439 ctgtgtcggtttagggtacaggta 3416
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 176 bits (89), Expect = 5e-41 Identities = 152/173 (87%) Strand = Plus / Minus Query: 305 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 364 |||||||||| ||||| | ||||||||||||||| |||||||| |||||| | ||||| Sbjct: 3682 caggaatattaacctgatttccatcgactacgcccttcggccttgccttaggtcttgact 3623 Query: 365 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 424 ||||| | ||||||| ||| | | ||||| |||| ||||||| |||||||||||||||| Sbjct: 3622 aacccttcatggacgagcctagtgaaggaacccttaggttttcagggcattggattctca 3563 Query: 425 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 477 |||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 3562 ccaatgttttcgttactcaagccgacattctcacttccgcttcgtccaccccc 3510
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 176 bits (89), Expect = 5e-41 Identities = 177/205 (86%), Gaps = 1/205 (0%) Strand = Plus / Minus Query: 267 tagcctcctccgtccctccgtaccaa-caaggggtagtacaggaatattgacctgttgtc 325 |||||| ||||||||||| ||||||| ||| | ||||||||||| || |||||||| | Sbjct: 1444 tagccttctccgtccctcggtaccaaacaatttgcagtacaggaatgttaacctgttggc 1385 Query: 326 catcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacctt 385 ||||| ||||||||||||||| |||||| ||||||||||||||| ||||||| ||| Sbjct: 1384 catcggatacgcctttcggcctctccttaggtcctgactcaccctccatggacgagccta 1325 Query: 386 gcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaag 445 | ||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1324 ctgaaggaacccttaggttttcggagcattggattctcaccaatgtttgcgttactcaag 1265 Query: 446 ccgacattctcgcttccgcttcgtc 470 ||||||||||| ||||||| ||||| Sbjct: 1264 ccgacattctcacttccgcctcgtc 1240 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 gcggaacgctcccctaccgatg 524 |||||||||||||||||||||| Sbjct: 1207 gcggaacgctcccctaccgatg 1186
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 320997 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 320938 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 320937 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 320878 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 320877 tcacccatgttttcgctactcaagccgacattctcacttc 320838
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3420 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3361 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3360 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3301 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3300 tcacccatgttttcgctactcaagccgacattctcacttc 3261
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3421 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3362 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3361 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3302 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3301 tcacccatgttttcgctactcaagccgacattctcacttc 3262
>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4141 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3645 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3586 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3585 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3526 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3525 tcacccatgttttcgctactcaagccgacattctcacttc 3486
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 19460 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 19519 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 19520 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 19579 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 19580 tcacccatgttttcgctactcaagccgacattctcacttc 19619
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 1214 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 1273 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 1274 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1333 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 1334 tcacccatgttttcgctactcaagccgacattctcacttc 1373
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 302 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 361 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 316486 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 316427 Query: 362 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 421 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 316426 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 316367 Query: 422 tcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 316366 tcacccatgttttcgctactcaagccgacattctcacttc 316327
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 349 atcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcg 408 |||||||| ||||||||||||||| ||||||||||| | ||||||| |||| | ||||| Sbjct: 1379 atcttaggacctgactcaccctccatggacgaacctagtggaggaacccttagactttcg 1320 Query: 409 gggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcg 468 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1319 gggcattggattctcaccaatgttttcgttactcaagccgacattctcacttccgccccg 1260 Query: 469 tcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctacc 520 || || || |||| ||| | |||||| ||| ||||||||||||||||||| Sbjct: 1259 tccacaccggcttacgctgatgcttcactcgttggcggaacgctcccctacc 1208 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactac 335 |||||||||||||| ||||||| |||||||||||| Sbjct: 1431 agtacaggaatattaacctgttttccatcgactac 1397
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 349 atcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcg 408 |||||||| ||||||||||||||| ||||||||||| | ||||||| |||| | ||||| Sbjct: 3261 atcttaggacctgactcaccctccatggacgaacctagtggaggaacccttagactttcg 3202 Query: 409 gggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcg 468 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 3201 gggcattggattctcaccaatgttttcgttactcaagccgacattctcacttccgccccg 3142 Query: 469 tcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctacc 520 || || || |||| ||| | |||||| ||| ||||||||||||||||||| Sbjct: 3141 tccacaccggcttacgctgatgcttcactcgttggcggaacgctcccctacc 3090 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactac 335 |||||||||||||| ||||||| |||||||||||| Sbjct: 3313 agtacaggaatattaacctgttttccatcgactac 3279
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 172 bits (87), Expect = 8e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| |||||||| |||||||||||||| |||||| ||| Sbjct: 1940 agtacaggaatattaacctgtttgccatcgacgacgcctttcggcctagccttaggacct 1881 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| |||| || ||||||||||| | ||||||| || |||||||||||||||||||| Sbjct: 1880 gactaaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 1821 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 463 ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1820 ctcaccaatgttttcgttactcaagccaacattctcacttccg 1778 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 cggaacgctcccctaccgat 523 |||||||||||||||||||| Sbjct: 1737 cggaacgctcccctaccgat 1718
>emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (partial) and 5S rRNA Length = 2957 Score = 172 bits (87), Expect = 8e-40 Identities = 150/171 (87%) Strand = Plus / Minus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||| ||||||||| ||| ||||||||||||||||| |||| |||| |||||| || Sbjct: 1316 tagtataggaatattaacccattgtccatcgactacgcttttcagcctcgccttaggtcc 1257 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| |||||||| |||||| |||| ||||||||||||| ||||||| |||||| |||| Sbjct: 1256 tgacttaccctccgcggacgagccttccggaggaaaccttaggttttcagggcatcggat 1197 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||| ||||||||| ||||||||||||||||||| |||| |||||||| Sbjct: 1196 tctcacccatgttttcgctactcaagccgacattctcacttctgcttcgtc 1146
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 170 bits (86), Expect = 3e-39 Identities = 143/162 (88%) Strand = Plus / Plus Query: 300 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 359 ||||||||||||||| ||||||| ||||||||||||| ||| ||| |||||| || Sbjct: 26411 tagtacaggaatattaacctgttatccatcgactacgttgttcaaccttgccttaggacc 26470 Query: 360 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 419 ||||| ||||| |||||||||||||| | |||||||||| ||||||||||||||||||| Sbjct: 26471 tgacttacccttcgtggacgaaccttccaaaggaaaccttaggttttcggggcattggat 26530 Query: 420 tctcaccaatgttttcgttactcaagccgacattctcgcttc 461 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 26531 tctcaccaatgttttcgctactcaagccgacattctcacttc 26572
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||| ||||| || ||| ||||||||||||||||| |||||| ||| ||||||||| Sbjct: 1029 agtactggaatcttcaccagttgtccatcgactacgtctttcgacctcgccttaggcccc 970 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||||||| |||||| |||| |||||||| |||| || |||| |||||||||||| Sbjct: 969 gactcaccctccgcggacgagccttccggaggaacccttaggatttcagggcattggatt 910 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| || ||||||||||||||||||| |||| |||||||| Sbjct: 909 ctcaccaatgtttgcgctactcaagccgacattctcacttctgcttcgtc 860 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||||||||| |||| Sbjct: 1238 ctgtgtcggtttcgggtacgggta 1215
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||| ||||| || ||| ||||||||||||||||| |||||| ||| ||||||||| Sbjct: 1027 agtactggaatcttcaccagttgtccatcgactacgtctttcgacctcgccttaggcccc 968 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 ||||||||||||| |||||| |||| |||||||| |||| || |||| |||||||||||| Sbjct: 967 gactcaccctccgcggacgagccttccggaggaacccttaggatttcagggcattggatt 908 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| || ||||||||||||||||||| |||| |||||||| Sbjct: 907 ctcaccaatgtttgcgctactcaagccgacattctcacttctgcttcgtc 858 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggta 25 ||||||||||||||||||| |||| Sbjct: 1236 ctgtgtcggtttcgggtacgggta 1213
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 ||||||||||| |||||||||| |||||||||||||||||||| ||| |||||| ||| Sbjct: 1450 agtacaggaatgttgacctgttttccatcgactacgcctttcgacctcgccttaggacct 1391 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| ||||| | ||||||| ||||| ||||| |||| |||||||||| ||||||||| Sbjct: 1390 gactaacccttcatggacgagccttgtaaaggaacccttaggttttcgggccattggatt 1331 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| |||||||||||||||||||||| |||| || ||||| Sbjct: 1330 ctcaccaatgtttgcgttactcaagccgacattctcacttctgcgtcgtc 1281 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 1671 ctgtgtcggtttcgggtacaggt 1649
>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2610 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Minus Query: 301 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 360 |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||| ||| Sbjct: 1415 agtacaggaatattaacctgtttgccatcgactacgcctttcgacctcgccttaggacct 1356 Query: 361 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 420 |||| ||||| | ||||||| ||||| ||||| |||| |||||||||| ||||||||| Sbjct: 1355 gactaacccttcatggacgagccttgtaaaggaacccttaggttttcgggacattggatt 1296 Query: 421 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 470 ||||||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 1295 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcgtcgtc 1246 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggt 24 ||||||||||||||||||||||| Sbjct: 1630 ctgtgtcggtttcgggtacaggt 1608
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1179 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1588 ctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1179 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1588 ctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1179 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1588 ctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| |||| ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaacctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| | || ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacctctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1589 ctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Minus Query: 296 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 355 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 356 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 415 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 416 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 475 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 476 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 524 | || || | ||||||| | |||||| |||||||||||| |||||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg 1180 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 2 ctgtgtcggtttcgggtacaggtaccctttt 32 |||||| |||||| ||||||||||||||||| Sbjct: 1588 ctgtgttggtttcaggtacaggtaccctttt 1558 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,033,401 Number of Sequences: 3902068 Number of extensions: 3033401 Number of successful extensions: 53794 Number of sequences better than 10.0: 1551 Number of HSP's better than 10.0 without gapping: 1554 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 45258 Number of HSP's gapped (non-prelim): 8127 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
