ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3f21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M62720.1|WHTUCP1A Wheat ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 773 Score = 803 bits (405), Expect = 0.0 Identities = 444/457 (97%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 116 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcggctgcagcaggaccc 175 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 176 gcccgccggcatcagcggcgcgccgcacgacaacaacatcaccctctggaacgccgtcat 235 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 atttgggcctgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 295 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 296 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgtttcacccaaa 355 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 356 catttatgcagatggaagcatctgcttggacatcctacagaaccagtggagccctatata 415 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 416 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaacccgaattc 475 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 ||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 tcctgcgaactctgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 535 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagcggac 592 ||| ||||||||||||||||||||||||||||||||| Sbjct: 536 ggttcgtgaggtcgtggagcagagctggacagcggac 572
>gb|BT017249.1| Zea mays clone EL01N0307D01.c mRNA sequence Length = 863 Score = 613 bits (309), Expect = e-172 Identities = 420/457 (91%) Strand = Plus / Plus Query: 132 cggagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcagg 191 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 169 cggagatgtcgacgccggcgaggaagcgcctgatgcgggacttcaagcggttgcagcagg 228 Query: 192 acccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccg 251 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 229 acccgcccgccggcatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccg 288 Query: 252 tcatattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaat 311 ||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 289 tcatattcgggccggatgacacgccgtgggacggaggcacgttcaagctgactctgcaat 348 Query: 312 tcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacc 371 | |||||||||||||||||||| || || |||||||||||||| || |||||||| |||| Sbjct: 349 ttacagaagattaccccaacaaacctccgactgttcggtttgtttcgaggatgtttcacc 408 Query: 372 caaacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagcccta 431 ||||||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 409 caaacatttatgcggatggaagcatctgtttggacatcctacaaaaccagtggagtccta 468 Query: 432 tatatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccga 491 |||| |||||||| ||||||||||||||||| |||||||||||||| ||||| || || | Sbjct: 469 tatacgatgttgcggcaatattgacctctattcagtccctgctgtgtgacccaaacccaa 528 Query: 492 attctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaacc 551 ||||||| |||||||| |||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 529 attctcctgccaactctgaagcagcgagaatgttcagcgagaacaagcgcgagtacaacc 588 Query: 552 gcaaggtgcgtgaggtcgtggagcagagctggacagc 588 |||| || || ||||| |||||||||||||||||||| Sbjct: 589 gcaaagttcgcgaggttgtggagcagagctggacagc 625
>ref|XM_469945.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 563 bits (284), Expect = e-157 Identities = 410/452 (90%) Strand = Plus / Plus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 179 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggac 238 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 239 ccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 298 Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 299 atattcggaccggatgacacgccgtgggatggaggcacgttcaagctgacactacaattt 358 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 ||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||| Sbjct: 359 acagaagattatcccaacaaaccaccagttgttcggtttgtctcaaggatgtttcaccca 418 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 || || |||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 419 aatatttatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctata 478 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 ||||||||||| || |||||||||||||||||||||||||| || || || || || || Sbjct: 479 tatgatgttgctgcgatattgacctctatccagtccctgctctgtgatccaaacccaaac 538 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 || || || |||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 539 tcccctgcaaactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgc 598 Query: 554 aaggtgcgtgaggtcgtggagcagagctggac 585 || || || ||| | ||||||||||||||||| Sbjct: 599 aaagtccgcgagattgtggagcagagctggac 630
>dbj|AB079798.1| Oryza sativa (japonica cultivar-group) OsRad6 mRNA for Rad6, complete cds Length = 764 Score = 563 bits (284), Expect = e-157 Identities = 410/452 (90%) Strand = Plus / Plus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 172 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggac 231 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 232 ccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 291 Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 292 atattcggaccggatgacacgccgtgggatggaggcacgttcaagctgacactacaattt 351 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 ||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||| Sbjct: 352 acagaagattatcccaacaaaccaccagttgttcggtttgtctcaaggatgtttcaccca 411 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 || || |||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 412 aatatttatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctata 471 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 ||||||||||| || |||||||||||||||||||||||||| || || || || || || Sbjct: 472 tatgatgttgctgcgatattgacctctatccagtccctgctctgtgatccaaacccaaac 531 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 || || || |||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 532 tcccctgcaaactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgc 591 Query: 554 aaggtgcgtgaggtcgtggagcagagctggac 585 || || || ||| | ||||||||||||||||| Sbjct: 592 aaagtccgcgagattgtggagcagagctggac 623
>dbj|AK120251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045G10, full insert sequence Length = 847 Score = 563 bits (284), Expect = e-157 Identities = 410/452 (90%) Strand = Plus / Plus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 179 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggac 238 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 239 ccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 298 Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 299 atattcggaccggatgacacgccgtgggatggaggcacgttcaagctgacactacaattt 358 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 ||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||| Sbjct: 359 acagaagattatcccaacaaaccaccagttgttcggtttgtctcaaggatgtttcaccca 418 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 || || |||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 419 aatatttatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctata 478 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 ||||||||||| || |||||||||||||||||||||||||| || || || || || || Sbjct: 479 tatgatgttgctgcgatattgacctctatccagtccctgctctgtgatccaaacccaaac 538 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 || || || |||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 539 tcccctgcaaactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgc 598 Query: 554 aaggtgcgtgaggtcgtggagcagagctggac 585 || || || ||| | ||||||||||||||||| Sbjct: 599 aaagtccgcgagattgtggagcagagctggac 630
>dbj|AK067703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J09, full insert sequence Length = 882 Score = 563 bits (284), Expect = e-157 Identities = 410/452 (90%) Strand = Plus / Plus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 165 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggac 224 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 225 ccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 284 Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 285 atattcggaccggatgacacgccgtgggatggaggcacgttcaagctgacactacaattt 344 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 ||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||| Sbjct: 345 acagaagattatcccaacaaaccaccagttgttcggtttgtctcaaggatgtttcaccca 404 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 || || |||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 405 aatatttatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctata 464 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 ||||||||||| || |||||||||||||||||||||||||| || || || || || || Sbjct: 465 tatgatgttgctgcgatattgacctctatccagtccctgctctgtgatccaaacccaaac 524 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 || || || |||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 525 tcccctgcaaactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgc 584 Query: 554 aaggtgcgtgaggtcgtggagcagagctggac 585 || || || ||| | ||||||||||||||||| Sbjct: 585 aaagtccgcgagattgtggagcagagctggac 616
>gb|AY103578.1| Zea mays PCO136701 mRNA sequence Length = 1179 Score = 545 bits (275), Expect = e-152 Identities = 410/455 (90%) Strand = Plus / Plus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 340 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaggcgcctgcagcaggac 399 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 400 ccgcccgccgggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 459 Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||| |||| || Sbjct: 460 atattcgggccggatgatacgccttgggacggaggcacgttcaagcttaccttgcagttt 519 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| || ||| Sbjct: 520 acagaagattacccaaacaagccaccaactgttcggttcgtctctaggatgtttcatcca 579 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 580 aacatatatgctgatggaagcatctgcttggatatcctacagaaccagtggagtcctata 639 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 ||||||||||| ||||| ||||| |||||||||||||||||||| || || || ||||| Sbjct: 640 tatgatgttgctgcaatcttgacttctatccagtccctgctgtgtgatccaaacccgaac 699 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 || || || ||||| ||||| || ||| ||| ||||||||||||||| |||||||||||| Sbjct: 700 tcccctgcaaactcagaagccgcaagactgttcagcgagaacaagcgggagtacaaccgc 759 Query: 554 aaggtgcgtgaggtcgtggagcagagctggacagc 588 || || || ||| | |||||||||||||||||||| Sbjct: 760 aaagtccgcgagattgtggagcagagctggacagc 794
>dbj|AK121382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H21, full insert sequence Length = 895 Score = 517 bits (261), Expect = e-143 Identities = 405/453 (89%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 155 gatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggaccc 214 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 ||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 215 ccccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcat 274 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 |||||||| ||||| ||||||||||| ||||| ||||||||||| ||| |||| || || Sbjct: 275 cttcgggccggatgatacgccgtgggacggaggcacgttcaagcttaccttgcagtttac 334 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||| Sbjct: 335 agaagattatcccaacaagccgccgactgttcggtttgtttctaggatgttccacccaaa 394 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 395 tatttatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatata 454 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 ||||||||| || |||||||| || || ||||| ||||||| || || || || || || Sbjct: 455 tgatgttgctgccatattgacttcaattcagtctttgctgtgtgatccaaaccccaactc 514 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 |||||| ||||| ||||| |||||| ||| || ||||||||||| |||||||||||||| Sbjct: 515 tccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgcaa 574 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagc 588 ||| |||||| |||||||||||||||||||||| Sbjct: 575 ggttcgtgagatcgtggagcagagctggacagc 607
>dbj|AK070524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G02, full insert sequence Length = 4109 Score = 517 bits (261), Expect = e-143 Identities = 405/453 (89%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 111 gatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggaccc 170 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 ||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 171 ccccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcat 230 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 |||||||| ||||| ||||||||||| ||||| ||||||||||| ||| |||| || || Sbjct: 231 cttcgggccggatgatacgccgtgggacggaggcacgttcaagcttaccttgcagtttac 290 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||| Sbjct: 291 agaagattatcccaacaagccgccgactgttcggtttgtttctaggatgttccacccaaa 350 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 351 tatttatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatata 410 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 ||||||||| || |||||||| || || ||||| ||||||| || || || || || || Sbjct: 411 tgatgttgctgccatattgacttcaattcagtctttgctgtgtgatccaaaccccaactc 470 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 |||||| ||||| ||||| |||||| ||| || ||||||||||| |||||||||||||| Sbjct: 471 tccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgcaa 530 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagc 588 ||| |||||| |||||||||||||||||||||| Sbjct: 531 ggttcgtgagatcgtggagcagagctggacagc 563
>ref|XM_476729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 515 bits (260), Expect = e-143 Identities = 404/452 (89%) Strand = Plus / Plus Query: 137 atgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggacccg 196 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 1 atgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggacccc 60 Query: 197 cccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcata 256 ||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 61 cccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcatc 120 Query: 257 ttcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcaca 316 |||||||| ||||| ||||||||||| ||||| ||||||||||| ||| |||| || ||| Sbjct: 121 ttcgggccggatgatacgccgtgggacggaggcacgttcaagcttaccttgcagtttaca 180 Query: 317 gaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaac 376 |||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||| Sbjct: 181 gaagattatcccaacaagccgccgactgttcggtttgtttctaggatgttccacccaaat 240 Query: 377 atctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatat 436 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 241 atttatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatatat 300 Query: 437 gatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattct 496 |||||||| || |||||||| || || ||||| ||||||| || || || || || ||| Sbjct: 301 gatgttgctgccatattgacttcaattcagtctttgctgtgtgatccaaaccccaactct 360 Query: 497 ccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaag 556 ||||| ||||| ||||| |||||| ||| || ||||||||||| ||||||||||||||| Sbjct: 361 ccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgcaag 420 Query: 557 gtgcgtgaggtcgtggagcagagctggacagc 588 || |||||| |||||||||||||||||||||| Sbjct: 421 gttcgtgagatcgtggagcagagctggacagc 452
>gb|BT016345.1| Zea mays clone Contig178 mRNA sequence Length = 965 Score = 505 bits (255), Expect = e-140 Identities = 405/455 (89%) Strand = Plus / Minus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 ||||||||||||||||| |||| ||| |||||||| ||||||| |||||||||||||||| Sbjct: 817 gagatgtcgacgccggctaggaggcgtctgatgcgggacttcaggcgcctgcagcaggac 758 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 757 ccgcccgccggcatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 698 Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||| |||| || Sbjct: 697 atattcgggccggatgatacgccttgggacggaggcacgttcaagcttaccttgcagttt 638 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| || ||| Sbjct: 637 acagaagattacccaaacaagccaccaactgttcggttcgtctctaggatgtttcatcca 578 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 577 aacatatatgctgatggaagcatctgcttggatatcctacagaaccagtggagtcctata 518 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 ||||||||||| ||||| ||||| ||||| |||||||||||||| || || | ||||| Sbjct: 517 tatgatgttgctgcaatcttgacttctattcagtccctgctgtgtgatccagacccgaac 458 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 || || || ||||| ||||| || ||| ||| ||||||||||||||| |||| | ||||| Sbjct: 457 tcccctgcaaactcagaagccgcaagactgttcagcgagaacaagcgggagttccaccgc 398 Query: 554 aaggtgcgtgaggtcgtggagcagagctggacagc 588 || || || ||| | |||||||||||||||||||| Sbjct: 397 aaagtccgcgagattgtggagcagagctggacagc 363
>gb|BT018048.1| Zea mays clone EL01N0531D04.c mRNA sequence Length = 817 Score = 287 bits (145), Expect = 2e-74 Identities = 379/457 (82%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 ||||||||| || ||||||||| | |||||| | || |||||||| || ||||||||| Sbjct: 131 gatgtcgactcctgcgaggaagaggctgatgagggatttcaagcggttgatgcaggaccc 190 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 || |||||||| || ||||| ||||| || |||||||||| ||| ||||| || ||||| Sbjct: 191 tccggccggcataagtggcgccccgcaggataacaacataatgctgtggaatgctgtcat 250 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 ||| || || ||||| || |||||||||||||||||||| |||||||| || || || | Sbjct: 251 atttggacctgatgataccccgtgggatggaggtacgtttaagctgactctccagtttaa 310 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||||| || || ||||| ||||||||||| || ||||| || ||||||||||| || || Sbjct: 311 tgaagaatatccaaacaaaccaccaactgtgcgatttgtttctaggatgttccatcctaa 370 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 ||| ||||| ||||||||||| ||||| |||||||| ||||| |||||||| || ||||| Sbjct: 371 catttatgctgatggaagcatatgcttagatatcctgcagaatcagtggagtccgatata 430 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 |||||| || || ||| | || || |||||||| || ||||||| || || |||||||| Sbjct: 431 tgatgtagctgcgatactcacgtcaatccagtcattgttgtgcgatccaaacccgaattc 490 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 || || ||||| ||||| ||| | |||| ||||||||||||||| |||||||||||||| Sbjct: 491 gcccgctaactctgaagccgcccgcatgttcagcgagaacaagcgagagtacaaccgcaa 550 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagcggac 592 || || ||||||||||||||||||||||| |||||| Sbjct: 551 agttcgggaggtcgtggagcagagctggacggcggac 587
>gb|AY104593.1| Zea mays PCO096181 mRNA sequence Length = 1003 Score = 287 bits (145), Expect = 2e-74 Identities = 379/457 (82%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 ||||||||| || ||||||||| | |||||| | || |||||||| || ||||||||| Sbjct: 217 gatgtcgactcctgcgaggaagaggctgatgagggatttcaagcggttgatgcaggaccc 276 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 || |||||||| || ||||| ||||| || |||||||||| ||| ||||| || ||||| Sbjct: 277 tccggccggcataagtggcgccccgcaggataacaacataatgctgtggaatgctgtcat 336 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 ||| || || ||||| || |||||||||||||||||||| |||||||| || || || | Sbjct: 337 atttggacctgatgataccccgtgggatggaggtacgtttaagctgactctccagtttaa 396 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||||| || || ||||| ||||||||||| || ||||| || ||||||||||| || || Sbjct: 397 tgaagaatatccaaacaaaccaccaactgtgcgatttgtttctaggatgttccatcctaa 456 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 ||| ||||| ||||||||||| ||||| |||||||| ||||| |||||||| || ||||| Sbjct: 457 catttatgctgatggaagcatatgcttagatatcctgcagaatcagtggagtccgatata 516 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 |||||| || || ||| | || || |||||||| || ||||||| || || |||||||| Sbjct: 517 tgatgtagctgcgatactcacgtcaatccagtcattgttgtgcgatccaaacccgaattc 576 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 || || ||||| ||||| ||| | |||| ||||||||||||||| |||||||||||||| Sbjct: 577 gcccgctaactctgaagccgcccgcatgttcagcgagaacaagcgagagtacaaccgcaa 636 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagcggac 592 || || ||||||||||||||||||||||| |||||| Sbjct: 637 agttcgggaggtcgtggagcagagctggacggcggac 673
>ref|NM_202096.1| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.2 mRNA, complete cds Length = 819 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 180 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 239 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 240 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 299 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 300 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 359 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 360 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 419 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 420 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 479 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 480 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 539 Query: 584 ac 585 || Sbjct: 540 ac 541
>ref|NM_101307.2| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.1 mRNA, complete cds Length = 948 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 309 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 368 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 369 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 428 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 429 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 488 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 489 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 548 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 549 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 608 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 609 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 668 Query: 584 ac 585 || Sbjct: 669 ac 670
>gb|AF332451.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme 1 (At1g14400) mRNA, complete cds Length = 459 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 88 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 147 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 148 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 207 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 208 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 267 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 268 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 327 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 328 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 387 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 388 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 447 Query: 584 ac 585 || Sbjct: 448 ac 449
>gb|AY091330.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 1 (UBC1) (At1g14400) mRNA, complete cds Length = 490 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 88 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 147 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 148 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 207 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 208 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 267 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 268 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 327 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 328 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 387 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 388 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 447 Query: 584 ac 585 || Sbjct: 448 ac 449
>gb|AY070074.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC1 (At1g14400) mRNA, complete cds Length = 839 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 261 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 320 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 321 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 380 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 381 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 440 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 441 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 500 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 501 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 560 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 561 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 620 Query: 584 ac 585 || Sbjct: 621 ac 622
>emb|BX817066.1|CNS0AD3L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 281 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 340 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 341 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 400 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 401 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 460 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 461 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 520 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 521 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 580 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 581 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 640 Query: 584 ac 585 || Sbjct: 641 ac 642
>emb|BX816760.1|CNS0AD3H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 847 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 234 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 293 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 294 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 353 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 354 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 413 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 414 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 473 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 474 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 533 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 534 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 593 Query: 584 ac 585 || Sbjct: 594 ac 595
>gb|AY085783.1| Arabidopsis thaliana clone 18146 mRNA, complete sequence Length = 838 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 309 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 368 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 369 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 428 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 429 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 488 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 489 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 548 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 549 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 608 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 609 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 668 Query: 584 ac 585 || Sbjct: 669 ac 670
>gb|DQ027016.1| Arabidopsis thaliana ubiquitinating enzyme (At1g14400) mRNA, complete cds Length = 459 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 88 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 147 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 148 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 207 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 208 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 267 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 268 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 327 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 328 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 387 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 388 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 447 Query: 584 ac 585 || Sbjct: 448 ac 449
>gb|M62721.1|ATHUCP1B Arabidopsis thaliana ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 749 Score = 234 bits (118), Expect = 3e-58 Identities = 301/362 (83%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 187 gacaacaacattatgctctggaatgctgtcatatttgggcctgatgacacaccatgggat 246 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 247 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 306 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 307 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 366 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || ||||||||||| || ||| | ||||| ||| Sbjct: 367 gacattctacaaaaccagtggagtccaatctatgatgttgctgctatacttacctccatc 426 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 427 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 486 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 487 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 546 Query: 584 ac 585 || Sbjct: 547 ac 548
>gb|AF262934.1|AF262934 Avicennia marina ubiquitin conjugating protein (UBC) mRNA, complete cds Length = 850 Score = 230 bits (116), Expect = 4e-57 Identities = 344/420 (81%) Strand = Plus / Plus Query: 135 agatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggacc 194 |||||||||| || || |||||| | || ||| | ||||||||| | ||||||| |||| Sbjct: 58 agatgtcgactcccgctaggaagagactcatgagggacttcaagaggttgcagcaagacc 117 Query: 195 cgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtca 254 | || || ||||| || || || || || ||||| ||||| | ||||||||| || || | Sbjct: 118 cacctgcaggcattagtggggcaccacaagacaataacattatgctctggaatgcagtta 177 Query: 255 tattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattca 314 |||| || || ||||| ||||| |||||||||||||| ||||| |||||||| || |||| Sbjct: 178 tatttggtcctgatgatacgccatgggatggaggtacattcaaactgacccttcagttca 237 Query: 315 cagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaa 374 |||||||||| || ||||| |||||||| ||||| ||||| || || ||||| ||||||| Sbjct: 238 cagaagattatccaaacaaaccaccaacagttcgatttgtttctagaatgtttcacccaa 297 Query: 375 acatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatat 434 | || ||||| ||||||||||| |||||||| ||||| || ||||| ||||| ||||||| Sbjct: 298 atatttatgcggatggaagcatatgcttggacatccttcaaaaccaatggagtcctatat 357 Query: 435 atgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaatt 494 |||| ||||||| ||| | || ||||||||||| ||| |||| ||||||||||| |||| Sbjct: 358 atgacattgcagccatacttacgtctatccagtcactgttgtgtgacccgaatccaaatt 417 Query: 495 ctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgca 554 |||| || || || ||||| || | |||| ||| |||||||||||||| ||||| |||| Sbjct: 418 ctcctgcaaattctgaagctgctcggatgttcagtgagaacaagcgcgaatacaatcgca 477
>emb|AJ843121.1| Plantago major mRNA for Ubiquitin-conjugating enzyme (ubc2 gene) Length = 858 Score = 224 bits (113), Expect = 3e-55 Identities = 368/453 (81%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 ||||||||| |||||||||||||| |||||| | ||||||||||| |||||||||| || Sbjct: 140 gatgtcgacaccggcgaggaagcggctgatgagggacttcaagcggttgcagcaggatcc 199 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 || || || |||||||| || ||| |||| ||||| || | | | |||||||| || || Sbjct: 200 tccggctggaatcagcggtgctccgtacgataacaatattatgatttggaacgctgttat 259 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 ||| || || ||||| || || ||||||||||||||||| ||| |||| || |||||| | Sbjct: 260 atttggtccggatgatactccttgggatggaggtacgtttaagttgactctacaattctc 319 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 || || ||||| ||||||||||||||||| || ||| | || || |||||||| || || Sbjct: 320 ggaggactacccgaacaagccaccaactgtgcgatttatatccagaatgttccatcccaa 379 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 ||| ||||| |||||||| || |||||||||||||| || || |||||||| || ||||| Sbjct: 380 catttatgctgatggaagtatttgcttggatatcctgcaaaatcagtggagtccaatata 439 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 |||||| || |||||| | || ||||||||||| ||||| || || || ||||| ||||| Sbjct: 440 tgatgtagctgcaatacttacatctatccagtcgctgctctgtgatccaaatccaaattc 499 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 || || ||||| ||||| || | ||| ||| || |||||||| || |||||| | || Sbjct: 500 acctgcaaactcggaagctgcacggttgttcagtgaaaacaagcgtgattacaacaggaa 559 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagc 588 |||||||||| | |||||||| || |||||||| Sbjct: 560 ggtgcgtgagattgtggagcaaagttggacagc 592
>gb|AY389584.1| Hyacinthus orientalis ubiquitin-conjugating enzyme (UBC) mRNA, partial cds Length = 691 Score = 210 bits (106), Expect = 4e-51 Identities = 298/362 (82%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | |||||||||||| || || || ||||| ||||| || || |||||| Sbjct: 78 gacaacaacatcatgctctggaacgcagtgatctttgggcctgatgatactccatgggat 137 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| || || |||| |||||||||| || ||||| || || ||||||||||| Sbjct: 138 ggaggtacctttaaattgacattgcaattcaccgaggattatcctaataagccaccaaca 197 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| ||| || Sbjct: 198 gttcggtttgtctcaagaatgtttcatccaaacatatatgcagatgggagcatatgcctg 257 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 ||||| |||||||||| ||||| || || |||||||||||||| ||| |||| ||||| Sbjct: 258 gatattttacagaaccaatggagtcccatttatgatgttgcagctatactgacatctatt 317 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 ||||| || || || ||||| || || || || || |||||||| || || || | ||| Sbjct: 318 cagtctctcctctgtgacccaaacccaaactccccggccaactctgaggctgctcggatg 377 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 | ||||||||||||||| ||||||||||| | ||| || ||| | ||||| ||||||||| Sbjct: 378 ttcagcgagaacaagcgtgagtacaaccgaagggtccgagagatagtggaacagagctgg 437 Query: 584 ac 585 || Sbjct: 438 ac 439
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 112518 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggac 112577 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 112578 ccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 112637 Query: 254 atattcggg 262 ||||||||| Sbjct: 112638 atattcggg 112646 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 116588 tatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctatatatgat 116647 Query: 440 gttgcagcaatattgacctctatccag 466 ||||| || |||||||||||||||||| Sbjct: 116648 gttgctgcgatattgacctctatccag 116674 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 503 aactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgt 562 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 117183 aactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgcaaagtccgc 117242 Query: 563 gaggtcgtggagcagagctggac 585 ||| | ||||||||||||||||| Sbjct: 117243 gagattgtggagcagagctggac 117265 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 |||||||||||||| || ||||| ||||||||||| |||||||| |||||| ||||||| Sbjct: 116380 acgttcaagctgacactacaatttacagaagattatcccaacaaaccaccagttgttcgg 116439 Query: 350 tttgtctcaaggatgttccacccaaa 375 ||||||||||||||||| |||||||| Sbjct: 116440 tttgtctcaaggatgtttcacccaaa 116465 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 266 gatgacacgccgtgggatggaggt 289 |||||||||||||||||||||||| Sbjct: 112825 gatgacacgccgtgggatggaggt 112848
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Minus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 32631389 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggac 32631330 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 32631329 ccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 32631270 Query: 254 atattcggg 262 ||||||||| Sbjct: 32631269 atattcggg 32631261 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 32627319 tatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctatatatgat 32627260 Query: 440 gttgcagcaatattgacctctatccag 466 ||||| || |||||||||||||||||| Sbjct: 32627259 gttgctgcgatattgacctctatccag 32627233 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 503 aactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgt 562 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 32626724 aactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgcaaagtccgc 32626665 Query: 563 gaggtcgtggagcagagctggac 585 ||| | ||||||||||||||||| Sbjct: 32626664 gagattgtggagcagagctggac 32626642 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 |||||||||||||| || ||||| ||||||||||| |||||||| |||||| ||||||| Sbjct: 32627527 acgttcaagctgacactacaatttacagaagattatcccaacaaaccaccagttgttcgg 32627468 Query: 350 tttgtctcaaggatgttccacccaaa 375 ||||||||||||||||| |||||||| Sbjct: 32627467 tttgtctcaaggatgtttcacccaaa 32627442 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 gatgacacgccgtgggatggaggt 289 |||||||||||||||||||||||| Sbjct: 32631082 gatgacacgccgtgggatggaggt 32631059
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Minus Query: 134 gagatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggac 193 |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 32721899 gagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggac 32721840 Query: 194 ccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtc 253 ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 32721839 ccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtc 32721780 Query: 254 atattcggg 262 ||||||||| Sbjct: 32721779 atattcggg 32721771 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 |||||||||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 32717829 tatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctatatatgat 32717770 Query: 440 gttgcagcaatattgacctctatccag 466 ||||| || |||||||||||||||||| Sbjct: 32717769 gttgctgcgatattgacctctatccag 32717743 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 503 aactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgt 562 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 32717234 aactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgcaaagtccgc 32717175 Query: 563 gaggtcgtggagcagagctggac 585 ||| | ||||||||||||||||| Sbjct: 32717174 gagattgtggagcagagctggac 32717152 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 |||||||||||||| || ||||| ||||||||||| |||||||| |||||| ||||||| Sbjct: 32718037 acgttcaagctgacactacaatttacagaagattatcccaacaaaccaccagttgttcgg 32717978 Query: 350 tttgtctcaaggatgttccacccaaa 375 ||||||||||||||||| |||||||| Sbjct: 32717977 tttgtctcaaggatgtttcacccaaa 32717952 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 266 gatgacacgccgtgggatggaggt 289 |||||||||||||||||||||||| Sbjct: 32721592 gatgacacgccgtgggatggaggt 32721569
>emb|AJ879070.1| Capsicum chinense mRNA for ubiquitin-conjugating enzyme Length = 957 Score = 196 bits (99), Expect = 6e-47 Identities = 267/323 (82%) Strand = Plus / Plus Query: 266 gatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattac 325 ||||||||||| ||||||||||||||||| |||||||| || ||||| | || |||||| Sbjct: 344 gatgacacgccttgggatggaggtacgtttaagctgacacttcaattttcggaggattac 403 Query: 326 cccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgca 385 ||||||||||| ||||| || |||||| | || ||||||||||| ||||| || ||||| Sbjct: 404 cccaacaagcctccaacggtgcggtttatttccaggatgttccatccaaatatttatgcc 463 Query: 386 gatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgatgttgca 445 ||||| || || |||||||| || || || || |||||||| ||||| ||||||||||| Sbjct: 464 gatgggagtatttgcttggacatactgcaaaatcagtggagtcctatttatgatgttgcg 523 Query: 446 gcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattctccagccaac 505 || ||| | || || |||||||| |||| ||||| || || || || || ||||| || Sbjct: 524 gctatactcacttcaatccagtctttgctctgcgatccaaacccaaactcgccagctaat 583 Query: 506 tccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgag 565 || |||||||| | |||| |||||||||||||||||||||||| | |||||||||||| Sbjct: 584 tcagaagcagcgcgcatgtttagcgagaacaagcgcgagtacaacaggaaggtgcgtgag 643 Query: 566 gtcgtggagcagagctggacagc 588 | || ||||||||||||||||| Sbjct: 644 attgttgagcagagctggacagc 666
>emb|BX814055.1|CNS0ADOD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 804 Score = 194 bits (98), Expect = 2e-46 Identities = 296/362 (81%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 ||||||||||| | ||||||||| || ||||||| ||||| |||||||| || |||||| Sbjct: 239 gacaacaacattatgctctggaatgctctcatatttgggcctgatgacacaccatgggat 298 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||| ||||| || | ||||| ||| | |||||||| ||||| || |||||||| Sbjct: 299 ggaggtactttcaaactctcactgcagttctctgaagattatcccaataaaccaccaaca 358 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||||||||| ||| ||||||| || || || || ||||||||||| || ||||||||| Sbjct: 359 gttcggtttgtgtcacggatgtttcatcctaatatttatgcagatgggagtatctgcttg 418 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || ||||| ||||||||||| || || |||||||| || || ||| | ||||| ||| Sbjct: 419 gacattctacaaaaccagtggagtccaatctatgatgtagctgctatacttacctccatc 478 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || |||| ||||||||||||| || ||||| ||||| || | ||| Sbjct: 479 cagtccttgctctgttacccttatccgaattctcctgcaaactcggaagctgctcggatg 538 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | ||||||||||||| || | | |||||||| || || ||||| |||||| Sbjct: 539 tacagcgaaagcaagcgcgagtaccacaggagagtgcgtgatgttgttgagcaaagctgg 598 Query: 584 ac 585 || Sbjct: 599 ac 600
>dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F01, full insert sequence Length = 947 Score = 184 bits (93), Expect = 2e-43 Identities = 300/369 (81%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 |||||||| |||| ||| ||||| || || || || || || ||||| || || |||||| Sbjct: 308 gacaacaatataatgctttggaatgctgtaatttttggccctgatgatactccttgggat 367 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 |||||||||||||||||||| || || || || |||||||| || ||||||||||| || Sbjct: 368 ggaggtacgttcaagctgacacttcagtttactgaagattatcctaacaagccacctaca 427 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 || || ||||| || ||||||| || || ||||| ||||| ||||| ||||| ||||| Sbjct: 428 gtgcgatttgtttctcggatgtttcatcctaacatttatgctgatgggagcatatgctta 487 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 ||||| ||||| |||||||||||||| ||||||||||| || || ||| | || || ||| Sbjct: 488 gatatactacaaaaccagtggagccccatatatgatgtagctgctatactcacatccatc 547 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 ||||| ||||| ||||| || || || ||||| || |||||||| ||||| ||| | | Sbjct: 548 cagtcgctgctttgcgatccaaacccaaattcacctgccaactctgaagctgcccgccta 607 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 | ||| ||||||||||| || |||||||| || || |||||| | ||||||||||||||| Sbjct: 608 ttcagtgagaacaagcgggaatacaaccgaaaagttcgtgagatagtggagcagagctgg 667 Query: 584 acagcggac 592 || |||||| Sbjct: 668 accgcggac 676
>dbj|AB026056.1| Nicotiana tabacum Ntubc2 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 784 Score = 184 bits (93), Expect = 2e-43 Identities = 363/453 (80%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 ||||||||| |||||||||||| | ||| || | || || ||||| | |||||||| || Sbjct: 84 gatgtcgacaccggcgaggaagagactggtgagggattttaagcggttacagcaggatcc 143 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 || ||||||||||| || || ||| | |||||||| |||| ||| ||||| || ||||| Sbjct: 144 cccggccggcatcagtggagctccgtatgacaacaatataatgctatggaatgcagtcat 203 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 ||||| || ||||| || || ||||||||||| || || |||||||| || |||||| | Sbjct: 204 tttcggtcctgatgatactccctgggatggaggcacatttaagctgacacttcaattctc 263 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||| ||||| || ||||| ||||||||||| || ||| | || || |||||||||||||| Sbjct: 264 agaggattatccaaacaaaccaccaactgtgcgatttatttccagaatgttccacccaaa 323 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 || || || |||||||| || |||||||| ||| | || || |||||||| || ||||| Sbjct: 324 tatttacgctgatggaagtatttgcttggacatcttgcaaaatcagtggagtcccatata 383 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 |||||| || || ||| |||| || |||||||| |||| || || || ||||| || || Sbjct: 384 tgatgtagctgctatactgacttcaatccagtctttgctctgtgatccaaatcctaactc 443 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 ||||| || || |||||||| | |||| ||| |||||||||||||| |||||| | || Sbjct: 444 gccagctaattcagaagcagcacgcatgttcagtgagaacaagcgcgaatacaacaggaa 503 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagc 588 |||||| ||| | || || |||||||||||||| Sbjct: 504 ggtgcgcgagattgttgaacagagctggacagc 536
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 3625882 gatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggaccc 3625823 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 ||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 3625822 ccccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcat 3625763 Query: 256 attcggg 262 |||||| Sbjct: 3625762 cttcggg 3625756 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Minus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3622658 tatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatatatgat 3622599 Query: 440 gttgcagcaatattgac 456 ||||| || |||||||| Sbjct: 3622598 gttgctgccatattgac 3622582 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 |||||||| ||||| ||||| |||||| ||| || ||||||||||| |||||||||||| Sbjct: 3621899 tctccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgc 3621840 Query: 554 aaggtgcgtgaggtcgtggagcagagctggacagc 588 ||||| |||||| |||||||||||||||||||||| Sbjct: 3621839 aaggttcgtgagatcgtggagcagagctggacagc 3621805 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 ||||||||||| ||| |||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 3622867 acgttcaagcttaccttgcagtttacagaagattatcccaacaagccgccgactgttcgg 3622808 Query: 350 tttgtctcaaggatgttccacccaaa 375 ||||| || ||||||||||||||||| Sbjct: 3622807 tttgtttctaggatgttccacccaaa 3622782
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 95199 gatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggaccc 95140 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 ||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 95139 ccccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcat 95080 Query: 256 attcggg 262 |||||| Sbjct: 95079 cttcggg 95073 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Minus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 91975 tatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatatatgat 91916 Query: 440 gttgcagcaatattgac 456 ||||| || |||||||| Sbjct: 91915 gttgctgccatattgac 91899 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 |||||||| ||||| ||||| |||||| ||| || ||||||||||| |||||||||||| Sbjct: 91216 tctccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgc 91157 Query: 554 aaggtgcgtgaggtcgtggagcagagctggacagc 588 ||||| |||||| |||||||||||||||||||||| Sbjct: 91156 aaggttcgtgagatcgtggagcagagctggacagc 91122 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 ||||||||||| ||| |||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 92184 acgttcaagcttaccttgcagtttacagaagattatcccaacaagccgccgactgttcgg 92125 Query: 350 tttgtctcaaggatgttccacccaaa 375 ||||| || ||||||||||||||||| Sbjct: 92124 tttgtttctaggatgttccacccaaa 92099
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 180 bits (91), Expect = 3e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 163832 gatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggaccc 163773 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 ||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 163772 ccccgcggggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcat 163713 Query: 256 attcggg 262 |||||| Sbjct: 163712 cttcggg 163706 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Minus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 160608 tatgcagatggaagcatctgcttggatattctacagaaccagtggagccctatatatgat 160549 Query: 440 gttgcagcaatattgac 456 ||||| || |||||||| Sbjct: 160548 gttgctgccatattgac 160532 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 |||||||| ||||| ||||| |||||| ||| || ||||||||||| |||||||||||| Sbjct: 159849 tctccagcaaactcagaagctgccagactgtttagtgagaacaagcgagagtacaaccgc 159790 Query: 554 aaggtgcgtgaggtcgtggagcagagctggacagc 588 ||||| |||||| |||||||||||||||||||||| Sbjct: 159789 aaggttcgtgagatcgtggagcagagctggacagc 159755 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 ||||||||||| ||| |||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 160817 acgttcaagcttaccttgcagtttacagaagattatcccaacaagccgccgactgttcgg 160758 Query: 350 tttgtctcaaggatgttccacccaaa 375 ||||| || ||||||||||||||||| Sbjct: 160757 tttgtttctaggatgttccacccaaa 160732
>gb|BT013884.1| Lycopersicon esculentum clone 132865R, mRNA sequence Length = 794 Score = 176 bits (89), Expect = 5e-41 Identities = 299/369 (81%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 |||||||| |||| ||| ||||| || || |||||||| || |||||||| || |||||| Sbjct: 148 gacaacaatataatgctttggaatgctgttatattcggtcctgatgacacaccttgggat 207 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaact 343 ||||||||||| |||||||| || ||||| | || ||||||||||||||||| ||||| Sbjct: 208 ggaggtacgtttaagctgacacttcaattttcggaggattaccccaacaagcctccaacg 267 Query: 344 gttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttg 403 ||||| ||||| || ||||||||||| || || || ||||| ||||| || || ||||| Sbjct: 268 gttcgatttgtatccaggatgttccatccgaatatttatgccgatgggagtatttgctta 327 Query: 404 gatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacctctatc 463 || || || || || |||||||| ||||||||||| ||||| || ||| | || || ||| Sbjct: 328 gacatactgcaaaatcagtggagtcctatatatgacgttgctgctatactcacttcaatc 387 Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 ||||| |||| || || || || || || || || || || || |||||||| | ||| Sbjct: 388 cagtctttgctttgtgatccaaacccaaactcgcctgctaattcagaagcagctcgcatg 447 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 | ||| ||||||||||| ||||||||| | |||||||||||| | || |||||||||||| Sbjct: 448 ttcagtgagaacaagcgtgagtacaacaggaaggtgcgtgagattgttgagcagagctgg 507 Query: 584 acagcggac 592 || |||||| Sbjct: 508 acggcggac 516
>dbj|AB026055.1| Nicotiana tabacum Ntubc1 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 809 Score = 176 bits (89), Expect = 5e-41 Identities = 362/453 (79%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 ||||||||| |||||||||||| | |||||| | || || ||||| | |||||||| || Sbjct: 86 gatgtcgacaccggcgaggaagagactgatgagggattttaagcggttacagcaggatcc 145 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 || ||||||||||| || || || | |||||||| |||| ||| ||||| || ||||| Sbjct: 146 cccggccggcatcagtggagctccatatgacaacaatataatgctatggaatgcagtcat 205 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 ||||| || ||||| || || |||||||||||||| || |||||||| || |||||| | Sbjct: 206 tttcggccctgatgatactccttgggatggaggtacatttaagctgacacttcaattctc 265 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||| || || || ||||| ||||||||||| || ||| | || || |||||||||||||| Sbjct: 266 agaggactatccaaacaaaccaccaactgtgcgatttatttccagaatgttccacccaaa 325 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 || || || |||||||| || |||||||| ||||| || || || ||||| || ||||| Sbjct: 326 tatttacgctgatggaagtatttgcttggacatcctgcaaaatcaatggagtcccatata 385 Query: 436 tgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattc 495 |||||| || || ||| |||| || |||||||| |||| || || || ||||| || || Sbjct: 386 tgatgtagctgctatactgacttcaatccagtctttgctctgtgatccaaatcccaactc 445 Query: 496 tccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaa 555 ||||| || || |||||||| | |||| ||| ||||||||||| || |||||| | || Sbjct: 446 gccagctaattcagaagcagcacgcatgttcagtgagaacaagcgtgaatacaacaggaa 505 Query: 556 ggtgcgtgaggtcgtggagcagagctggacagc 588 |||||| ||| | || || |||||||||||||| Sbjct: 506 ggtgcgcgagattgttgaacagagctggacagc 538
>gb|BT017437.1| Zea mays clone EL01N0404C11.c mRNA sequence Length = 425 Score = 163 bits (82), Expect = 8e-37 Identities = 151/174 (86%) Strand = Plus / Plus Query: 413 cagaaccagtggagccctatatatgatgttgcagcaatattgacctctatccagtccctg 472 |||||||||||||| ||||||||||||||||| ||||| || || ||||||||||||||| Sbjct: 9 cagaaccagtggagtcctatatatgatgttgctgcaattttaacttctatccagtccctg 68 Query: 473 ctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatgtacagcgag 532 ||||| || || || || || || || || ||||| |||||||| ||| ||| ||||||| Sbjct: 69 ctgtgtgatccaaacccaaactcccctgcaaactcagaagcagcaagactgttcagcgag 128 Query: 533 aacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctggaca 586 |||||||| ||||||| |||||| || |||||| |||||||||||||||||||| Sbjct: 129 aacaagcgggagtacacccgcaaagtccgtgagatcgtggagcagagctggaca 182
>gb|AY660750.1| Populus tomentosa ubiquitin carrier protein mRNA, complete cds Length = 700 Score = 149 bits (75), Expect = 1e-32 Identities = 357/451 (79%) Strand = Plus / Plus Query: 135 agatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggacc 194 ||||||| || ||||| |||||| | ||||| | || |||||| | || |||||||| | Sbjct: 193 agatgtcaaccccggcaaggaagaggttgatgagggatttcaagaggcttcagcaggatc 252 Query: 195 cgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtca 254 | || || || ||||| || || || || ||||||||||| | |||||||||||| || | Sbjct: 253 cacctgctggtatcagtggagcccctcaagacaacaacatcatgctctggaacgctgtta 312 Query: 255 tattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattca 314 |||| || || ||||| || || ||||||||||| ||||| ||| |||| || ||||||| Sbjct: 313 tatttggacctgatgatactccttgggatggagggacgtttaagttgactcttcaattca 372 Query: 315 cagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaa 374 |||| ||||| || || || || ||||| || || |||||||| | ||||| || |||| Sbjct: 373 cagaggattatccaaataaacctccaacagtccgctttgtctctcgaatgtttcatccaa 432 Query: 375 acatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatat 434 | || |||||||||||||| || ||||| || || |||| || |||||||| || |||| Sbjct: 433 atatttatgcagatggaagtatatgcttagacattttacaaaatcagtggagtcccatat 492 Query: 435 atgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaatt 494 |||||||||| || ||| | || || |||||||||||||| || || || || || |||| Sbjct: 493 atgatgttgctgctatactaacttccatccagtccctgctctgtgatccaaacccaaatt 552 Query: 495 ctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgca 554 | ||||| ||||| ||||| || | |||| ||| ||||| ||||| || ||||| |||| Sbjct: 553 ccccagcaaactctgaagccgctcgcatgttcagtgagaataagcgggaatacaatcgca 612 Query: 555 aggtgcgtgaggtcgtggagcagagctggac 585 || ||||| | ||||||||||||||||| Sbjct: 613 gagttcgtgaaattgtggagcagagctggac 643
>gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier protein mRNA, complete cds Length = 910 Score = 133 bits (67), Expect = 7e-28 Identities = 250/311 (80%) Strand = Plus / Plus Query: 278 tgggatggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagcca 337 ||||||||||| ||||| ||| ||| ||| ||||| | || ||||| || ||||||||| Sbjct: 266 tgggatggaggcacgtttaagttgagccttcaattttccgaggattatccgaacaagcca 325 Query: 338 ccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagatggaagcatc 397 || ||||| || |||||||| | ||||| || |||||||| |||||||||||||| || Sbjct: 326 cccactgtacgatttgtctcccgaatgtttcatccaaacatttatgcagatggaagtatt 385 Query: 398 tgcttggatatcctacagaaccagtggagccctatatatgatgttgcagcaatattgacc 457 || ||||||| | || || |||||||| ||||||||||||||||| || || | || Sbjct: 386 tgtctggatatattgcaaaatcagtggagtcctatatatgatgttgctgcgattctcact 445 Query: 458 tctatccagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagcc 517 ||||||||||| |||| || || || || || |||||||| || ||||| ||||| || Sbjct: 446 tctatccagtcattgctttgtgatcccaacccaaattctcctgcaaactctgaagcggct 505 Query: 518 agaatgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcag 577 |||||| ||| ||||||||||| |||||||| || | ||||| || || ||||||||| Sbjct: 506 cgaatgttcagtgagaacaagcgtgagtacaatcgtagagtgcgggaagttgtggagcag 565 Query: 578 agctggacagc 588 || |||||||| Sbjct: 566 agttggacagc 576
>ref|NM_126331.2| Arabidopsis thaliana ATUBC2; ubiquitin conjugating enzyme AT2G02760 (ATUBC2) mRNA, complete cds Length = 860 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Plus Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 ||||||||||| ||||| || || |||||||||||||| ||||| || | ||||| || Sbjct: 297 atattcgggcctgatgataccccttgggatggaggtactttcaaattgtcactgcagttt 356 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 | |||||||| || || || |||||||| || |||||||| ||| |||||||||| ||| Sbjct: 357 tcggaagattatccaaataaaccaccaacagtgcggtttgtttcacggatgttccatcca 416 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 ||||| ||||| ||||| || || |||||||| || || || ||||| ||||| || ||| Sbjct: 417 aacatttatgctgatgggagtatatgcttggacattctccaaaaccaatggagtccaata 476 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 || ||||| || || ||| | ||||| || ||||| |||| || || || ||||||||| Sbjct: 477 tacgatgtcgctgctatactaacctccattcagtcattgctatgtgatcctaatccgaat 536 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaac 550 ||||| || || || ||||| || |||||| ||| || | |||||||||||||||| Sbjct: 537 tctcctgcaaattcggaagctgcacgaatgttcagtgaaagcaagcgcgagtacaac 593
>ref|NM_125648.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G62540 mRNA, complete cds Length = 877 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 403 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 462 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 463 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 522 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 523 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 563
>gb|AY143805.1| Arabidopsis thaliana At5g62540/K19B1_15 mRNA, complete cds Length = 441 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 133 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 192 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 193 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 252 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 253 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 293
>emb|Y13031.1|ATUBC2 A.thaliana mRNA for ubiquitin conjugating enzyme UBC2 Length = 824 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Plus Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 ||||||||||| ||||| || || |||||||||||||| ||||| || | ||||| || Sbjct: 243 atattcgggcctgatgataccccttgggatggaggtactttcaaattgtcactgcagttt 302 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 | |||||||| || || || |||||||| || |||||||| ||| |||||||||| ||| Sbjct: 303 tcggaagattatccaaataaaccaccaacagtgcggtttgtttcacggatgttccatcca 362 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 ||||| ||||| ||||| || || |||||||| || || || ||||| ||||| || ||| Sbjct: 363 aacatttatgctgatgggagtatatgcttggacattctccaaaaccaatggagtccaata 422 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 || ||||| || || ||| | ||||| || ||||| |||| || || || ||||||||| Sbjct: 423 tacgatgtcgctgctatactaacctccattcagtcattgctatgtgatcctaatccgaat 482 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaac 550 ||||| || || || ||||| || |||||| ||| || | |||||||||||||||| Sbjct: 483 tctcctgcaaattcggaagctgcacgaatgttcagtgaaagcaagcgcgagtacaac 539
>gb|AY072479.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 538 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Plus Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 ||||||||||| ||||| || || |||||||||||||| ||||| || | ||||| || Sbjct: 118 atattcgggcctgatgataccccttgggatggaggtactttcaaattgtcactgcagttt 177 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 | |||||||| || || || |||||||| || |||||||| ||| |||||||||| ||| Sbjct: 178 tcggaagattatccaaataaaccaccaacagtgcggtttgtttcacggatgttccatcca 237 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 ||||| ||||| ||||| || || |||||||| || || || ||||| ||||| || ||| Sbjct: 238 aacatttatgctgatgggagtatatgcttggacattctccaaaaccaatggagtccaata 297 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 || ||||| || || ||| | ||||| || ||||| |||| || || || ||||||||| Sbjct: 298 tacgatgtcgctgctatactaacctccattcagtcattgctatgtgatcctaatccgaat 357 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaac 550 ||||| || || || ||||| || |||||| ||| || | |||||||||||||||| Sbjct: 358 tctcctgcaaattcggaagctgcacgaatgttcagtgaaagcaagcgcgagtacaac 414
>gb|AY048267.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 819 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 403 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 462 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 463 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 522 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 523 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 563
>gb|AY039851.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 716 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 247 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 306 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 307 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 366 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 367 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 407
>gb|AF370558.1|AF370558 Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 830 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Plus Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 ||||||||||| ||||| || || |||||||||||||| ||||| || | ||||| || Sbjct: 267 atattcgggcctgatgataccccttgggatggaggtactttcaaattgtcactgcagttt 326 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 | |||||||| || || || |||||||| || |||||||| ||| |||||||||| ||| Sbjct: 327 tcggaagattatccaaataaaccaccaacagtgcggtttgtttcacggatgttccatcca 386 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 ||||| ||||| ||||| || || |||||||| || || || ||||| ||||| || ||| Sbjct: 387 aacatttatgctgatgggagtatatgcttggacattctccaaaaccaatggagtccaata 446 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 || ||||| || || ||| | ||||| || ||||| |||| || || || ||||||||| Sbjct: 447 tacgatgtcgctgctatactaacctccattcagtcattgctatgtgatcctaatccgaat 506 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaac 550 ||||| || || || ||||| || |||||| ||| || | |||||||||||||||| Sbjct: 507 tctcctgcaaattcggaagctgcacgaatgttcagtgaaagcaagcgcgagtacaac 563
>emb|BX833570.1|CNS09ZB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 320 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 379 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 380 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 439 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 440 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 480
>emb|BX832888.1|CNS09YZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 693 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 219 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 278 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 279 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 338 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 339 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 379
>emb|BX833841.1|CNS09YNI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL7ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 221 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 280 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 281 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 340 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 341 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 381
>gb|AY085367.1| Arabidopsis thaliana clone 148141 mRNA, complete sequence Length = 682 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 245 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 304 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 305 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 364 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 365 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 405
>dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C14, full insert sequence Length = 2920 Score = 121 bits (61), Expect = 3e-24 Identities = 175/213 (82%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct: 2450 tatgctgatgggagcatatgcttagatatactacaaaaccagtggagccccatatatgat 2509 Query: 440 gttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaattctcca 499 || || || ||| | || || |||||||| ||||| ||||| || || || ||||| || Sbjct: 2510 gtagctgctatactcacatccatccagtcgctgctttgcgatccaaacccaaattcacct 2569 Query: 500 gccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaaggtg 559 |||||||| ||||| ||| | | | ||| ||||||||||| || |||||||| || || Sbjct: 2570 gccaactctgaagctgcccgcctattcagtgagaacaagcgggaatacaaccgaaaagtt 2629 Query: 560 cgtgaggtcgtggagcagagctggacagcggac 592 |||||| | ||||||||||||||||| |||||| Sbjct: 2630 cgtgagatagtggagcagagctggaccgcggac 2662 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 224 gacaacaacataacgctctggaacgccgtcatattcgggcccgatgacacgccgtgggat 283 |||||||| |||| ||| ||||| || || || || || || ||||| || || |||||| Sbjct: 329 gacaacaatataatgctttggaatgctgtaatttttggccctgatgatactccttgggat 388 Query: 284 ggaggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccacc 339 |||||||||||||||||||| || || || || |||||||| || ||||||||||| Sbjct: 389 ggaggtacgttcaagctgacacttcagtttactgaagattatcctaacaagccacc 444
>gb|DQ027018.1| Arabidopsis thaliana ubiquitinating enzyme (At5g62540) mRNA, complete cds Length = 453 Score = 121 bits (61), Expect = 3e-24 Identities = 136/161 (84%) Strand = Plus / Plus Query: 269 gacacgccgtgggatggaggtacgttcaagctgaccctgcaattcacagaagattacccc 328 ||||| || |||||||||||||| |||||| |||| || || ||||| || ||||| || Sbjct: 133 gacactccatgggatggaggtactttcaagttgactcttcacttcaccgaggattatccg 192 Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagat 388 ||||| || || | |||||||||||| ||| ||||||| || |||||||| ||||| ||| Sbjct: 193 aacaaacccccgattgttcggtttgtttcacggatgtttcatccaaacatttatgctgat 252 Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccc 429 |||||||| |||||||||||| | || |||||||||||||| Sbjct: 253 ggaagcatttgcttggatatcttgcaaaaccagtggagccc 293
>gb|DQ027017.1| Arabidopsis thaliana ubiquitinating enzyme (At2g02760) mRNA, complete cds Length = 459 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Plus Query: 254 atattcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattc 313 ||||||||||| ||||| || || |||||||||||||| ||||| || | ||||| || Sbjct: 118 atattcgggcctgatgataccccttgggatggaggtactttcaaattgtcactgcagttt 177 Query: 314 acagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccaccca 373 | |||||||| || || || |||||||| || |||||||| ||| |||||||||| ||| Sbjct: 178 tcggaagattatccaaataaaccaccaacagtgcggtttgtttcacggatgttccatcca 237 Query: 374 aacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctata 433 ||||| ||||| ||||| || || |||||||| || || || ||||| ||||| || ||| Sbjct: 238 aacatttatgctgatgggagtatatgcttggacattctccaaaaccaatggagtccaata 297 Query: 434 tatgatgttgcagcaatattgacctctatccagtccctgctgtgcgacccgaatccgaat 493 || ||||| || || ||| | ||||| || ||||| |||| || || || ||||||||| Sbjct: 298 tacgatgtcgctgctatactaacctccattcagtcattgctatgtgatcctaatccgaat 357 Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaac 550 ||||| || || || ||||| || |||||| ||| || | |||||||||||||||| Sbjct: 358 tctcctgcaaattcggaagctgcacgaatgttcagtgaaagcaagcgcgagtacaac 414
>gb|DQ294271.1| Solanum tuberosum clone 147C03 ubiquitin carrier-like protein mRNA, complete cds Length = 788 Score = 115 bits (58), Expect = 2e-22 Identities = 211/262 (80%) Strand = Plus / Plus Query: 183 tgcagcaggacccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctct 242 ||||||||||||| || || || || || || || || || ||||||||||| | ||| | Sbjct: 117 tgcagcaggaccctcctgctggtattagtggtgcacctcaagacaacaacattatgcttt 176 Query: 243 ggaacgccgtcatattcgggcccgatgacacgccgtgggatggaggtacgttcaagctga 302 |||| ||||| ||||| || || |||||||| || |||||||| |||||||||||| ||| Sbjct: 177 ggaatgccgtgatatttggtcctgatgacactccttgggatggtggtacgttcaagttga 236 Query: 303 ccctgcaattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaagga 362 | || |||||| | || ||||||||||| |||||||| || || |||||||| || | | Sbjct: 237 ctcttcaattctctgaggattaccccaataagccacccaccgtgcggtttgtttctcgaa 296 Query: 363 tgttccacccaaacatctatgcagatggaagcatctgcttggatatcctacagaaccagt 422 |||| || || || || ||||| |||||||| || || |||||||| || ||||| || | Sbjct: 297 tgtttcatcctaatatttatgcggatggaagtatatgtttggatattcttcagaatcaat 356 Query: 423 ggagccctatatatgatgttgc 444 |||| || || ||||||||||| Sbjct: 357 ggagtccaatttatgatgttgc 378
>ref|XM_469944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3633 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 503 aactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgt 562 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| || || Sbjct: 3597 aactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgcaaagtccgc 3538 Query: 563 gaggtcgtggagcagagctggac 585 ||| | ||||||||||||||||| Sbjct: 3537 gagattgtggagcagagctggac 3515
>gb|DQ191625.1| Solanum tuberosum unknown mRNA Length = 791 Score = 107 bits (54), Expect = 4e-20 Identities = 210/262 (80%) Strand = Plus / Plus Query: 183 tgcagcaggacccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctct 242 ||||||||||||| || || || || || || || || || ||||||||||| | ||| | Sbjct: 116 tgcagcaggaccctcctgctggtattagtggtgcacctcaagacaacaacattatgcttt 175 Query: 243 ggaacgccgtcatattcgggcccgatgacacgccgtgggatggaggtacgttcaagctga 302 |||| ||||| ||||| || || |||||||| || |||||||| |||||||||||| ||| Sbjct: 176 ggaatgccgtgatatttggtcctgatgacactccttgggatggtggtacgttcaagttga 235 Query: 303 ccctgcaattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaagga 362 | || |||||| | || ||||||||||| |||||| | || || |||||||| || | | Sbjct: 236 ctcttcaattctctgaggattaccccaataagccatccaccgtgcggtttgtttctcgaa 295 Query: 363 tgttccacccaaacatctatgcagatggaagcatctgcttggatatcctacagaaccagt 422 |||| || || || || ||||| |||||||| || || |||||||| || ||||| || | Sbjct: 296 tgtttcatcctaatatttatgcggatggaagtatatgtttggatattcttcagaatcaat 355 Query: 423 ggagccctatatatgatgttgc 444 |||| || || ||||||||||| Sbjct: 356 ggagtccaatttatgatgttgc 377
>emb|AJ234842.1|HVU234842 Hordeum vulgare genomic DNA fragment; clone MWG2217 Length = 402 Score = 103 bits (52), Expect = 6e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 191 gacccgcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgcc 250 ||||| |||||||| ||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 4 gacccacccgccgggatcagcggcgcgccgcacgacaacaacatcatgctctggaacgcc 63 Query: 251 gtcatattcggg 262 ||||| |||||| Sbjct: 64 gtcatcttcggg 75
>gb|DQ200366.1| Solanum tuberosum clone 055E08 ubiquitin-conjugating enzyme-like protein mRNA, complete cds Length = 807 Score = 99.6 bits (50), Expect = 1e-17 Identities = 242/306 (79%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcgcctgatgcgcgacttcaagcgcctgcagcaggaccc 195 ||||||||| |||||| |||| | ||||| | || |||||||| | |||||||| || Sbjct: 75 gatgtcgacagcggcgaagaagagattgatgagggatttcaagcggttacagcaggatcc 134 Query: 196 gcccgccggcatcagcggcgcgccgcacgacaacaacataacgctctggaacgccgtcat 255 || || ||||||||||| || || || |||| ||| |||| | | ||||| || || || Sbjct: 135 tcctgctggcatcagcggtgcacctcatgacagcaatataatgttatggaatgctgttat 194 Query: 256 attcgggcccgatgacacgccgtgggatggaggtacgttcaagctgaccctgcaattcac 315 |||||| || ||||| || | ||||||||||||||||| ||| |||| || ||||| | Sbjct: 195 attcggtcctgatgatactgcctgggatggaggtacgtttaagatgacacttcaattttc 254 Query: 316 agaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccacccaaa 375 ||| ||||| || |||||||| |||| || | |||||||| || |||||||| ||||| Sbjct: 255 agaggattatcctaacaagccgccaaaagtacactttgtctccagaatgttccatccaaa 314 Query: 376 catctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatata 435 || ||||| |||||||| || || ||||| ||| | || || |||||||| |||||||| Sbjct: 315 tatttatgctgatggaagtatttgtttggacatcttgcaaaatcagtggagtcctatata 374 Query: 436 tgatgt 441 |||||| Sbjct: 375 tgatgt 380 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 527 agcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctggaca 586 ||||||||||||||||| |||||| | ||||||||||| | || ||||| ||||||||| Sbjct: 466 agcgagaacaagcgcgactacaacaggaaggtgcgtgaaatagttgagcaaagctggaca 525 Query: 587 gc 588 || Sbjct: 526 gc 527
>gb|AY190722.1| Pagrus major ubiquitin-conjugating enzyme E2A mRNA, complete cds Length = 592 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 311 ttcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccac 370 ||||||||||| ||||||||||| || || || || || ||||| |||| |||||| || Sbjct: 294 ttcacagaagaataccccaacaaaccccccacagtacgatttgtgtcaaagatgtttcat 353 Query: 371 ccaaacatctatgcagatggaagcatctgcttggatatcctacagaa 417 ||||| |||||||||||||||| || || ||||| ||||||||||| Sbjct: 354 ccaaatgtctatgcagatggaagtatatgtttggacatcctacagaa 400
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 58504 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 58445 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 58444 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 58385 Query: 584 ac 585 || Sbjct: 58384 ac 58383 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||||||||| || ||||||||||| || ||||| ||||||||||| || || |||||| Sbjct: 58683 tatgcagatgggagtatctgcttggacattctacaaaaccagtggagtccaatctatgat 58624 Query: 440 gttgcagcaatattgacctctatccag 466 ||||| || ||| | ||||| |||||| Sbjct: 58623 gttgctgctatacttacctccatccag 58597 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 317 gaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgtt 366 |||||||| ||||| || |||||||| ||||||||||| ||| ||||||| Sbjct: 58843 gaagattatcccaataaaccaccaacagttcggtttgtgtcacggatgtt 58794
>gb|L19351.1|ATHUBIQUA Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC1) gene, complete cds Length = 1887 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 464 cagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaatg 523 |||||| |||| || ||||| |||||||||||||| || ||||| ||||| || | ||| Sbjct: 1578 cagtccttgctctgtgaccctaatccgaattctcctgcaaactcggaagctgctcggatg 1637 Query: 524 tacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagctgg 583 |||||||| | |||||||||||||||| | | |||||||| || || ||||| |||||| Sbjct: 1638 tacagcgaaagcaagcgcgagtacaacaggagagtgcgtgatgttgttgagcaaagctgg 1697 Query: 584 ac 585 || Sbjct: 1698 ac 1699 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||||||||| || ||||||||||| || ||||| ||||||||||| || || |||||| Sbjct: 1399 tatgcagatgggagtatctgcttggacattctacaaaaccagtggagtccaatctatgat 1458 Query: 440 gttgcagcaatattgacctctatccag 466 ||||| || ||| | ||||| |||||| Sbjct: 1459 gttgctgctatacttacctccatccag 1485 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 317 gaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgtt 366 |||||||| ||||| || |||||||| ||||||||||| ||| ||||||| Sbjct: 1239 gaagattatcccaataaaccaccaacagttcggtttgtgtcacggatgtt 1288
>ref|XM_790883.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC591316), mRNA Length = 426 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 ||||||||||| ||| | | || |||||||| ||||||||||| ||||| || || || Sbjct: 115 acgttcaagctaaccattgagtttacagaagagtaccccaacaaaccacctacagtacgc 174 Query: 350 tttgtctcaaggatgttccacccaaacatctatgcagatggaagcatctgcttggatatc 409 ||||| |||| |||||| ||||| || | ||||| |||||| | |||||||||||||| Sbjct: 175 tttgtatcaaagatgtttcaccctaatgtatatgctgatggaggaatctgcttggatatt 234 Query: 410 ctacagaaccagtggagccctatatatgatgttgcagcaat 450 |||||||| ||||| |||| ||||||||| ||||||| Sbjct: 235 ctacagaatagatggagtcctacatatgatgtatcagcaat 275
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 462 tccagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaa 521 ||||||| ||||| ||||| || || || ||||| || |||||||| ||||| ||| | Sbjct: 1412 tccagtcgctgctttgcgatccaaacccaaattcacctgccaactctgaagctgcccgcc 1471 Query: 522 tgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagct 581 | | ||| ||||||||||| || |||||||| || || |||||| | ||||||||||||| Sbjct: 1472 tattcagtgagaacaagcgggaatacaaccgaaaagttcgtgagatagtggagcagagct 1531 Query: 582 ggacagcggac 592 |||| |||||| Sbjct: 1532 ggaccgcggac 1542 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct: 532 tatgctgatgggagcatatgcttagatatactacaaaaccagtggagccccatatatgat 591 Query: 440 gt 441 || Sbjct: 592 gt 593
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 462 tccagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaa 521 ||||||| ||||| ||||| || || || ||||| || |||||||| ||||| ||| | Sbjct: 4906827 tccagtcgctgctttgcgatccaaacccaaattcacctgccaactctgaagctgcccgcc 4906886 Query: 522 tgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagct 581 | | ||| ||||||||||| || |||||||| || || |||||| | ||||||||||||| Sbjct: 4906887 tattcagtgagaacaagcgggaatacaaccgaaaagttcgtgagatagtggagcagagct 4906946 Query: 582 ggacagcggac 592 |||| |||||| Sbjct: 4906947 ggaccgcggac 4906957 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct: 4905947 tatgctgatgggagcatatgcttagatatactacaaaaccagtggagccccatatatgat 4906006 Query: 440 gt 441 || Sbjct: 4906007 gt 4906008 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 286 aggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccacc 339 |||||||||||||||||| || || || || |||||||| || ||||||||||| Sbjct: 4903888 aggtacgttcaagctgacacttcagtttactgaagattatcctaacaagccacc 4903941 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 127 gggctcggagatgtcgacgccggcgagga 155 ||||||||||| |||||||||| |||||| Sbjct: 17136566 gggctcggagacgtcgacgccgacgagga 17136538
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 462 tccagtccctgctgtgcgacccgaatccgaattctccagccaactccgaagcagccagaa 521 ||||||| ||||| ||||| || || || ||||| || |||||||| ||||| ||| | Sbjct: 179235 tccagtcgctgctttgcgatccaaacccaaattcacctgccaactctgaagctgcccgcc 179294 Query: 522 tgtacagcgagaacaagcgcgagtacaaccgcaaggtgcgtgaggtcgtggagcagagct 581 | | ||| ||||||||||| || |||||||| || || |||||| | ||||||||||||| Sbjct: 179295 tattcagtgagaacaagcgggaatacaaccgaaaagttcgtgagatagtggagcagagct 179354 Query: 582 ggacagcggac 592 |||| |||||| Sbjct: 179355 ggaccgcggac 179365 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| Sbjct: 178355 tatgctgatgggagcatatgcttagatatactacaaaaccagtggagccccatatatgat 178414 Query: 440 gt 441 || Sbjct: 178415 gt 178416 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 286 aggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccacc 339 |||||||||||||||||| || || || || |||||||| || ||||||||||| Sbjct: 176296 aggtacgttcaagctgacacttcagtttactgaagattatcctaacaagccacc 176349
>gb|BC026053.1| Mus musculus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:13793 IMAGE:4012075), complete cds Length = 1744 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 291 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 350 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 351 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 401
>gb|AF089812.1| Mus musculus ubiquitin-conjugating enzyme HR6A mRNA, complete cds Length = 1647 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 301 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 360 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 361 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 411
>ref|NM_019668.2| Mus musculus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) (Ube2a), mRNA Length = 1744 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 291 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 350 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 351 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 401
>dbj|AK133723.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430434L20 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1665 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 302 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 361 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 362 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 412
>dbj|AK150417.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830007D01 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1637 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 276 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 335 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 336 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 386
>dbj|AK153327.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830138O09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1637 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 276 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 335 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 336 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 386
>gb|AF383148.1|AF383148 Mus musculus ubiquitin-conjugating enzyme HR6A mRNA, complete cds Length = 1647 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 301 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 360 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 361 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 411
>dbj|AK164074.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430050D09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1664 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 302 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 361 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 362 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 412
>dbj|AK160545.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410024M07 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 697 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 300 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 359 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 360 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 410
>dbj|AK160538.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410013I09 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 688 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 302 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 361 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 362 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 412
>dbj|AK160527.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400007G23 product:ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), full insert sequence Length = 1652 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || |||||||| |||||| | |||||||| | |||||||| Sbjct: 288 aattcactgaagagtatcctaataagccacctactgttagatttgtctctaagatgttcc 347 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 | || ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 348 atcctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 398
>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123, complete sequence Length = 79601 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 494 tctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaaccgc 553 ||||| || |||||||||||||| |||||| || ||||||||||| |||||||||||| Sbjct: 11267 tctcctgcaaactccgaagcagctcgaatgtttagtgagaacaagcgtgagtacaaccgc 11208 Query: 554 aaggtgcgtgaggtcgtggagcagagctggacagc 588 | ||| | || | ||||||||||| |||||||| Sbjct: 11207 agagtgagggaaattgtggagcagagttggacagc 11173 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 383 gcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgatgtt 442 ||||||||||| || || |||||||| |||| || |||||||| |||||||||||||| Sbjct: 15459 gcagatggaagtatttgtttggatatattacaaaatcagtggagtcctatatatgatgta 15400 Query: 443 gcagcaatattgacctctatccag 466 || || ||| | || ||||||||| Sbjct: 15399 gctgctatactcacatctatccag 15376
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 491 aattctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgagtacaac 550 |||||||| || ||||| ||||| || |||||| ||| ||||||||||| |||||||| Sbjct: 100754 aattctcctgcaaactctgaagcggctcgaatgttcagtgagaacaagcgtgagtacaat 100813 Query: 551 cgcaaggtgcgtgaggtcgtggagcagagctggacagc 588 || | ||||| || || ||||||||||| |||||||| Sbjct: 100814 cgaagagtgcgggaagttgtggagcagagttggacagc 100851 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccctatatatgat 439 |||||||||||||| || || ||||||| | || || |||||||| |||||||| ||| Sbjct: 98688 tatgcagatggaagtatttgtctggatatattgcaaaatcagtggagtcctatatacgat 98747 Query: 440 gttgc 444 ||||| Sbjct: 98748 gttgc 98752
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccc 429 ||||| ||||||||||| |||||||||||| | || |||||||||||||| Sbjct: 44887 tatgctgatggaagcatttgcttggatatcttgcaaaaccagtggagccc 44936 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 286 aggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgt 345 |||||| |||||| |||| || || ||||| || ||||| || ||||| || || | ||| Sbjct: 44714 aggtactttcaagttgactcttcacttcaccgaggattatccgaacaaacccccgattgt 44773 Query: 346 tcggtttgtctcaaggatgttccacccaaaca 377 ||||||||| ||| ||||||| || ||||||| Sbjct: 44774 tcggtttgtttcacggatgtttcatccaaaca 44805
>gb|L19352.1|ATHUBIQUB Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC3) gene, complete cds and flanking regions Length = 2342 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 380 tatgcagatggaagcatctgcttggatatcctacagaaccagtggagccc 429 ||||| ||||||||||| |||||||||||| | || |||||||||||||| Sbjct: 1620 tatgctgatggaagcatttgcttggatatcttgcaaaaccagtggagccc 1669 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Plus Query: 286 aggtacgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgt 345 |||||| |||||| |||| || || ||||| || ||||| || ||||| || || | ||| Sbjct: 1447 aggtactttcaagttgactcttcacttcaccgaggattatccgaacaaacccccgattgt 1506 Query: 346 tcggtttgtctcaaggatgttccacccaaaca 377 ||||||||| ||| ||||||| || ||||||| Sbjct: 1507 tcggtttgtttcacggatgtttcatccaaaca 1538
>ref|XM_864331.1| PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 1 (UBE2A), mRNA Length = 459 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 332 aagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagatgga 391 ||||||||||| ||| | |||||||| | ||||||||| ||||| ||||||||||||| Sbjct: 196 aagccaccaacggttagatttgtctctaagatgttccatccaaatgtctatgcagatggt 255 Query: 392 agcat 396 ||||| Sbjct: 256 agcat 260
>gb|AF419316.1|AF419316 Bos taurus RAD6-like protein HR6A (BHR6A) mRNA, partial cds Length = 372 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 332 aagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagatgga 391 ||||||||||| ||| | |||||||| | ||||||||| ||||| ||||||||||||| Sbjct: 166 aagccaccaacggttagatttgtctctaagatgttccatccaaatgtctatgcagatggt 225 Query: 392 agcat 396 ||||| Sbjct: 226 agcat 230
>gb|BC102100.1| Bos taurus cDNA clone MGC:127256 IMAGE:7946441, complete cds Length = 1441 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 332 aagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagatgga 391 ||||||||||| ||| | |||||||| | ||||||||| ||||| ||||||||||||| Sbjct: 337 aagccaccaacggttagatttgtctctaagatgttccatccaaatgtctatgcagatggt 396 Query: 392 agcat 396 ||||| Sbjct: 397 agcat 401
>gb|AF132075.1|AF132075 Bos taurus RAD6 homolog (BHR6A) gene, partial cds Length = 372 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 332 aagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagatgga 391 ||||||||||| ||| | |||||||| | ||||||||| ||||| ||||||||||||| Sbjct: 166 aagccaccaacggttagatttgtctctaagatgttccatccaaatgtctatgcagatggt 225 Query: 392 agcat 396 ||||| Sbjct: 226 agcat 230
>gb|AF132074.1|AF132074 Equus caballus RAD6 homolog (EHR6A) gene, partial cds Length = 378 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 332 aagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagatgga 391 ||||||||||| ||| | |||||||| | ||||||||| ||||| ||||||||||||| Sbjct: 169 aagccaccaacggttagatttgtctctaagatgttccatccaaatgtctatgcagatggt 228 Query: 392 agcat 396 ||||| Sbjct: 229 agcat 233
>gb|AF132073.1|AF132073 Sus scrofa RAD6 homolog (PHR6A) gene, partial cds Length = 378 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 332 aagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgcagatgga 391 ||||||||||| ||| | |||||||| | ||||||||| ||||| ||||||||||||| Sbjct: 169 aagccaccaacggttagatttgtctctaagatgttccatccaaatgtctatgcagatggt 228 Query: 392 agcat 396 ||||| Sbjct: 229 agcat 233
>ref|NM_001013933.1| Rattus norvegicus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) (Ube2a), mRNA Length = 1737 Score = 54.0 bits (27), Expect = 5e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || || ||||| |||||| | ||||| || | |||||||| Sbjct: 341 aattcactgaagaatatccaaataaaccacctactgttagatttgtgtctaagatgttcc 400 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 |||| ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 401 accctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 451
>gb|BC079353.1| Rattus norvegicus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:94810 IMAGE:7108236), complete cds Length = 1737 Score = 54.0 bits (27), Expect = 5e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || || ||||| |||||| | ||||| || | |||||||| Sbjct: 341 aattcactgaagaatatccaaataaaccacctactgttagatttgtgtctaagatgttcc 400 Query: 369 acccaaacatctatgcagatggaagcatctgcttggatatcctacagaacc 419 |||| ||| ||||||||||||| || || || ||||||| || ||||||| Sbjct: 401 accctaacgtctatgcagatggtagtatatgtctggatatacttcagaacc 451
>ref|NM_204865.1| Gallus gallus ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), mRNA Length = 459 Score = 54.0 bits (27), Expect = 5e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 157 gcgcctgatgcgcgacttcaagcgcctgcagcaggacccgcccgccggcatcagcggcgc 216 |||||| ||||| ||||||||| | |||||| ||||||| || ||||| | ||||| || Sbjct: 21 gcgcctcatgcgagacttcaagaggctgcaggaggaccccccggccggggtgagcggggc 80 Query: 217 gccgcacgacaacaacataacgctctggaacgccgtcatattcgggcccga 267 || ||| |||||||| | | | |||||||||||||| ||||||||||| Sbjct: 81 cccctccgagaacaacatcatggtgtggaacgccgtcatcttcgggcccga 131 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||||||||| || || || |||||||| |||||| | |||||||| | ||||| | Sbjct: 173 aattcacagaagaatatccaaataagccacctactgttagatttgtctctaaaatgtttc 232 Query: 369 acccaaacatctatgcagatgg 390 | ||||| ||||||||||||| Sbjct: 233 atccaaatgtctatgcagatgg 254
>gb|AF120212.1|AF120212 Gallus gallus ubiquitin-conjugating enzyme mRNA, complete cds Length = 459 Score = 54.0 bits (27), Expect = 5e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 157 gcgcctgatgcgcgacttcaagcgcctgcagcaggacccgcccgccggcatcagcggcgc 216 |||||| ||||| ||||||||| | |||||| ||||||| || ||||| | ||||| || Sbjct: 21 gcgcctcatgcgagacttcaagaggctgcaggaggaccccccggccggggtgagcggggc 80 Query: 217 gccgcacgacaacaacataacgctctggaacgccgtcatattcgggcccga 267 || ||| |||||||| | | | |||||||||||||| ||||||||||| Sbjct: 81 cccctccgagaacaacatcatggtgtggaacgccgtcatcttcgggcccga 131 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||||||||| || || || |||||||| |||||| | |||||||| | ||||| | Sbjct: 173 aattcacagaagaatatccaaataagccacctactgttagatttgtctctaaaatgtttc 232 Query: 369 acccaaacatctatgcagatgg 390 | ||||| ||||||||||||| Sbjct: 233 atccaaatgtctatgcagatgg 254
>ref|XM_960844.1| Encephalitozoon cuniculi GB-M1 ubiquitin-conjugating enzyme E2 (ECU01_1010) partial mRNA Length = 651 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 349 gtttgtctcaaggatgttccacccaaacatcta 381 |||||| |||| ||||||||||||||||||||| Sbjct: 309 gtttgtttcaaagatgttccacccaaacatcta 341
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 349 gtttgtctcaaggatgttccacccaaacatcta 381 |||||| |||| ||||||||||||||||||||| Sbjct: 117573 gtttgtttcaaagatgttccacccaaacatcta 117541
>gb|AY017809.1| Oryza sativa microsatellite MRG0134 containing (AG)X12, closest to marker S11633, genomic sequence Length = 224 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcg 159 |||||||||||||||||||||||| Sbjct: 197 gatgtcgacgccggcgaggaagcg 220
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 310 attcacagaagattaccccaacaagccaccaa 341 ||||||||| ||||||||| |||||||||||| Sbjct: 715361 attcacagacgattaccccgacaagccaccaa 715392
>gb|AC087606.2| Trypanosoma brucei chromosome 4 clone RPCI93-4J6, complete sequence Length = 37931 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 310 attcacagaagattaccccaacaagccaccaa 341 ||||||||| ||||||||| |||||||||||| Sbjct: 14082 attcacagacgattaccccgacaagccaccaa 14113
>gb|AC079933.3| Trypanosoma brucei chromosome 4 clone RPCI93-1H19, complete sequence Length = 171392 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 310 attcacagaagattaccccaacaagccaccaa 341 ||||||||| ||||||||| |||||||||||| Sbjct: 167858 attcacagacgattaccccgacaagccaccaa 167889
>gb|BC044416.1| Danio rerio zgc:55512, mRNA (cDNA clone MGC:55512 IMAGE:2641752), complete cds Length = 1571 Score = 48.1 bits (24), Expect = 0.033 Identities = 105/132 (79%) Strand = Plus / Plus Query: 311 ttcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccac 370 |||||||| || || ||||||||||| ||||| || |||| ||||||| |||||| || Sbjct: 269 ttcacagaggaatatcccaacaagcctccaacagtgaggttcgtctcaaagatgtttcat 328 Query: 371 ccaaacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccct 430 ||||| | ||||| ||||| || |||||| | ||||| || ||||| | ||||| ||| Sbjct: 329 ccaaatgtgtatgctgatggcagtatctgcctagatattcttcagaatcgatggagtcct 388 Query: 431 atatatgatgtt 442 | ||||||||| Sbjct: 389 acttatgatgtt 400
>ref|NM_199719.1| Danio rerio zgc:55512 (zgc:55512), mRNA Length = 1571 Score = 48.1 bits (24), Expect = 0.033 Identities = 105/132 (79%) Strand = Plus / Plus Query: 311 ttcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccac 370 |||||||| || || ||||||||||| ||||| || |||| ||||||| |||||| || Sbjct: 269 ttcacagaggaatatcccaacaagcctccaacagtgaggttcgtctcaaagatgtttcat 328 Query: 371 ccaaacatctatgcagatggaagcatctgcttggatatcctacagaaccagtggagccct 430 ||||| | ||||| ||||| || |||||| | ||||| || ||||| | ||||| ||| Sbjct: 329 ccaaatgtgtatgctgatggcagtatctgcctagatattcttcagaatcgatggagtcct 388 Query: 431 atatatgatgtt 442 | ||||||||| Sbjct: 389 acttatgatgtt 400
>ref|XM_820139.1| Trypanosoma brucei TREU927 clone RPCI93-1H19 ubiquitin-conjugating enzyme E2 (Tb927.4.2710) partial mRNA Length = 477 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 310 attcacagaagattaccccaacaagccaccaa 341 ||||||||| ||||||||| |||||||||||| Sbjct: 204 attcacagacgattaccccgacaagccaccaa 235
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcg 159 |||||||||||||||||||||||| Sbjct: 6621538 gatgtcgacgccggcgaggaagcg 6621561
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 136 gatgtcgacgccggcgaggaagcg 159 |||||||||||||||||||||||| Sbjct: 101709 gatgtcgacgccggcgaggaagcg 101732
>ref|XM_783067.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC583142), partial mRNA Length = 256 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 290 acgttcaagctgaccctgcaattcacagaagattaccccaacaagccaccaactgttcgg 349 ||||||||||| ||| | | || |||||||| ||||||||||| ||||| || || || Sbjct: 169 acgttcaagctaaccattgagtttacagaagagtaccccaacaaaccacctacagtacgc 228 Query: 350 tttgtctcaaggatgttccaccc 372 ||||| |||| |||||| ||||| Sbjct: 229 tttgtatcaaagatgtttcaccc 251
>gb|BC042021.1| Homo sapiens cDNA clone IMAGE:5312200 Length = 2679 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || || ||||| || ||| | |||||||| | |||||||| Sbjct: 1195 aattcactgaagaatatccaaataaaccacctacagttagatttgtctctaagatgttcc 1254 Query: 369 acccaaacatctatgcagatgg 390 | ||||| ||||||||||||| Sbjct: 1255 atccaaatgtctatgcagatgg 1276
>gb|BC010175.2| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 1, mRNA (cDNA clone MGC:20175 IMAGE:3051041), complete cds Length = 728 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || || ||||| || ||| | |||||||| | |||||||| Sbjct: 311 aattcactgaagaatatccaaataaaccacctacagttagatttgtctctaagatgttcc 370 Query: 369 acccaaacatctatgcagatgg 390 | ||||| ||||||||||||| Sbjct: 371 atccaaatgtctatgcagatgg 392
>ref|XM_390981.1| Gibberella zeae PH-1 chromosome 3 UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Colletotrichum hard-s> (FG10805.1) partial mRNA Length = 420 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 389 ggaagcatctgcttggatatcctacagaaccagtggagccct 430 |||||||||||||||||||| || | |||||||||||||| Sbjct: 220 ggaagcatctgcttggatattctccgtgaccagtggagccct 261
>ref|NM_181777.1| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), transcript variant 3, mRNA Length = 2678 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || || ||||| || ||| | |||||||| | |||||||| Sbjct: 1194 aattcactgaagaatatccaaataaaccacctacagttagatttgtctctaagatgttcc 1253 Query: 369 acccaaacatctatgcagatgg 390 | ||||| ||||||||||||| Sbjct: 1254 atccaaatgtctatgcagatgg 1275
>ref|NM_003336.2| Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), transcript variant 1, mRNA Length = 1799 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || || ||||| || ||| | |||||||| | |||||||| Sbjct: 349 aattcactgaagaatatccaaataaaccacctacagttagatttgtctctaagatgttcc 408 Query: 369 acccaaacatctatgcagatgg 390 | ||||| ||||||||||||| Sbjct: 409 atccaaatgtctatgcagatgg 430
>gb|AC002521.3| Arabidopsis thaliana chromosome 2 clone T20F6 map CIC11A04, complete sequence Length = 81004 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Minus Query: 485 aatccgaattctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgag 544 |||||||||||||| || || || ||||| || |||||| ||| || | |||||||||| Sbjct: 52467 aatccgaattctcctgcaaattcggaagctgcacgaatgttcagtgaaagcaagcgcgag 52408 Query: 545 tacaac 550 |||||| Sbjct: 52407 tacaac 52402
>gb|M74524.1|HUMHHR6A Human HHR6A (yeast RAD 6 homologue) mRNA, complete cds Length = 1743 Score = 44.1 bits (22), Expect = 0.52 Identities = 67/82 (81%) Strand = Plus / Plus Query: 309 aattcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttcc 368 ||||||| ||||| || || || || ||||| || ||| | |||||||| | |||||||| Sbjct: 293 aattcactgaagaatatccaaataaaccacctacagttagatttgtctctaagatgttcc 352 Query: 369 acccaaacatctatgcagatgg 390 | ||||| ||||||||||||| Sbjct: 353 atccaaatgtctatgcagatgg 374
>gb|L19353.1|ATHUBIQUC Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC2) gene, complete cds Length = 2282 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Plus Query: 485 aatccgaattctccagccaactccgaagcagccagaatgtacagcgagaacaagcgcgag 544 |||||||||||||| || || || ||||| || |||||| ||| || | |||||||||| Sbjct: 1497 aatccgaattctcctgcaaattcggaagctgcacgaatgttcagtgaaagcaagcgcgag 1556 Query: 545 tacaac 550 |||||| Sbjct: 1557 tacaac 1562
>gb|DQ214532.1| Taeniopygia guttata clone 0058P0018C03 ubiquitin-conjugating enzyme E2B (RAD6-like) variant 1-like mRNA, complete sequence Length = 937 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 cgcctgatgcgcgacttcaag 178 ||||||||||||||||||||| Sbjct: 47 cgcctgatgcgcgacttcaag 67
>ref|XM_513169.1| PREDICTED: Pan troglodytes similar to family with sequence similarity 43, member B (LOC456591), mRNA Length = 1190 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 gcgacttcaagcgcctgcagc 188 ||||||||||||||||||||| Sbjct: 608 gcgacttcaagcgcctgcagc 628
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 127 gggctcggagatgtcgacgccggcgagga 155 ||||||||||| |||||||||| |||||| Sbjct: 80701 gggctcggagacgtcgacgccgacgagga 80673
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 127 gggctcggagatgtcgacgccggcgagga 155 ||||||||||| |||||||||| |||||| Sbjct: 129933 gggctcggagacgtcgacgccgacgagga 129905
>ref|NM_207334.1| Homo sapiens family with sequence similarity 43, member B (FAM43B), mRNA Length = 2569 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 gcgacttcaagcgcctgcagc 188 ||||||||||||||||||||| Sbjct: 1143 gcgacttcaagcgcctgcagc 1163
>ref|XM_752262.1| Ustilago maydis 521 hypothetical protein (UM01208.1) partial mRNA Length = 558 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 240 tctggaacgccgtcatattcgggcccgatgacacgcc 276 |||||||||||||||| ||||| |||| |||||||| Sbjct: 104 tctggaacgccgtcatcttcggtcccgcagacacgcc 140
>emb|AL391357.20| Human DNA sequence from clone RP11-401M16 on chromosome 1 Contains the gene for calcium/calmodulin-dependent protein kinase II (CaMKIINalpha), the gene for a novel protein (FLJ12875), a ribosomal protein S4 X-linked (RPS4X) pseudogene, the CDA gene for cytidine deaminase, the PINK1 gene for PTEN induced putative kinase 1, a novel gene (FLJ00387), the DDOST gene for dolichyl-diphosphooligosaccharide-protein glycosyltransferase and the 3' end of the KIF17 gene for kinesin family member 17, complete sequence Length = 195076 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 gcgacttcaagcgcctgcagc 188 ||||||||||||||||||||| Sbjct: 75388 gcgacttcaagcgcctgcagc 75408
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 ggagatgtcgacgccggcgaggaag 157 |||||||||| |||||||||||||| Sbjct: 9239 ggagatgtcgtcgccggcgaggaag 9263
>dbj|AK126900.1| Homo sapiens cDNA FLJ44952 fis, clone BRAWH2004078 Length = 2569 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 gcgacttcaagcgcctgcagc 188 ||||||||||||||||||||| Sbjct: 1143 gcgacttcaagcgcctgcagc 1163
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cagcaggacccgcccgccggc 205 ||||||||||||||||||||| Sbjct: 3755771 cagcaggacccgcccgccggc 3755791
>ref|XM_624237.1| PREDICTED: Apis mellifera similar to ENSANGP00000017916 (LOC551852), mRNA Length = 791 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 361 gatgttccacccaaacatctatgcagatggaagcatctgcttggatatcctacagaacca 420 |||||||||||| || | ||||| |||||| ||||||| ||||| || ||||||| | Sbjct: 530 gatgttccaccctaatgtatatgctgatggaggcatctgtttggacatattacagaatcg 589 Query: 421 gtggagccctatatatgatgt 441 |||||||||| |||||||| Sbjct: 590 ttggagccctacttatgatgt 610
>dbj|AK223045.1| Homo sapiens mRNA for ubiquitin-conjugating enzyme E2A isoform 1 variant, clone: JTH14565 Length = 1768 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 350 tttgtctcaaggatgttccacccaaacatctatgcagatgg 390 |||||||| | ||||||||| ||||| ||||||||||||| Sbjct: 361 tttgtctctaagatgttccatccaaatgtctatgcagatgg 401
>dbj|AB046016.1| Macaca fascicularis brain cDNA, clone:QccE-15449, similar to human family with sequence similarity 43 member B (FAM43B), mRNA, NM_207334 Length = 2033 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 gcgacttcaagcgcctgcagc 188 ||||||||||||||||||||| Sbjct: 588 gcgacttcaagcgcctgcagc 608
>emb|BX537313.5| Zebrafish DNA sequence from clone CH211-235E18 in linkage group 2, complete sequence Length = 196642 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 311 ttcacagaagattaccccaacaagccaccaactgttcggtttgtctcaaggatgttccac 370 |||||||| || || ||||||||||| ||||| || |||| ||||||| |||||| || Sbjct: 26524 ttcacagaggaatatcccaacaagcctccaacagtgaggttcgtctcaaagatgtttcat 26583 Query: 371 ccaaa 375 ||||| Sbjct: 26584 ccaaa 26588
>gb|AC154221.3| Mus musculus BAC clone RP24-373L7 from chromosome 13, complete sequence Length = 157332 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 560 cgtgaggtcgtggagcagagctgg 583 ||||||||||||| |||||||||| Sbjct: 79783 cgtgaggtcgtggtgcagagctgg 79760
>ref|XM_528111.1| PREDICTED: Pan troglodytes similar to G protein-coupled receptor 124; tumor endothelial marker 5 (LOC472739), mRNA Length = 5250 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgggaggaacggggccaggc 124 |||||||||||||||||||| Sbjct: 469 cgggaggaacggggccaggc 450
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgc 384 |||||||| || |||||||| ||| |||| | ||||||||||| || |||||||| Sbjct: 2209638 aacaagccccctactgttcgctttatctccaaaatgttccaccccaatatctatgc 2209693
>ref|XM_365949.1| Magnaporthe grisea 70-15 hypothetical protein (MG10169.4) partial mRNA Length = 2166 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gacccgcccgccggcatcag 210 |||||||||||||||||||| Sbjct: 424 gacccgcccgccggcatcag 443
>ref|XM_599043.2| PREDICTED: Bos taurus similar to CG8312-PA, isoform A (LOC520793), mRNA Length = 972 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cgacttcaagcgcctgcagc 188 |||||||||||||||||||| Sbjct: 609 cgacttcaagcgcctgcagc 628
>ref|XM_567181.1| Cryptococcus neoformans var. neoformans JEC21 ubiquitin-conjugating enzyme e2-17 kda (CNA08010) partial mRNA Length = 935 Score = 40.1 bits (20), Expect = 8.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 329 aacaagccaccaactgttcggtttgtctcaaggatgttccacccaaacatctatgc 384 |||||||| || |||||||| ||| |||| | ||||||||||| || |||||||| Sbjct: 265 aacaagccccctactgttcgctttatctccaaaatgttccaccccaatatctatgc 320
>emb|AL133281.12| Human DNA sequence from clone RP11-252O2 on chromosome 9p22.1-22.3 Contains part of the SLC24A2 gene for solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (NCKX2) and a pseudogene similar to part of a novel gene, complete sequence Length = 158697 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 tctgcttggatatcctacag 415 |||||||||||||||||||| Sbjct: 153731 tctgcttggatatcctacag 153750
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 cggcatcagcggcgcgccgcacga 225 ||||||||||||||||| |||||| Sbjct: 305896 cggcatcagcggcgcgctgcacga 305919
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 cggcatcagcggcgcgccgcacga 225 ||||||||||||||||| |||||| Sbjct: 30889 cggcatcagcggcgcgctgcacga 30912
>gb|AE012505.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 413 of 460 of the complete genome Length = 10606 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gccggcatcagcggcgcgcc 219 |||||||||||||||||||| Sbjct: 6221 gccggcatcagcggcgcgcc 6202
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gccggcatcagcggcgcgcc 219 |||||||||||||||||||| Sbjct: 4641768 gccggcatcagcggcgcgcc 4641749
>gb|AC039057.8|AC039057 Homo sapiens chromosome 15 clone RP11-81G24 map 15q21.3, complete sequence Length = 174672 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aggcggcggccgctccggga 95 |||||||||||||||||||| Sbjct: 127547 aggcggcggccgctccggga 127566
>ref|XM_395927.2| PREDICTED: Apis mellifera similar to CG17342-PA, isoform A (LOC412470), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 caccaactgttcggtttgtc 355 |||||||||||||||||||| Sbjct: 1411 caccaactgttcggtttgtc 1430
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cggcggccgctccgggagcg 98 |||||||||||||||||||| Sbjct: 4004811 cggcggccgctccgggagcg 4004830
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gcgagtacaaccgcaaggtg 559 |||||||||||||||||||| Sbjct: 1602878 gcgagtacaaccgcaaggtg 1602897
>gb|AY955083.1| Hypocrea lixii ubiquitin conjugating protein mRNA, complete cds Length = 848 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 398 tgcttggatatcctacagaaccagtggagccc 429 ||||||||||||||||| |||| |||||||| Sbjct: 262 tgcttggatatcctacaaaaccgatggagccc 293
>ref|XM_308373.2| Anopheles gambiae str. PEST ENSANGP00000019133 (ENSANGG00000016644), partial mRNA Length = 1266 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 caccaccagcccggggaacc 68 |||||||||||||||||||| Sbjct: 597 caccaccagcccggggaacc 578
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aacgctctggaacgccgtca 254 |||||||||||||||||||| Sbjct: 1314641 aacgctctggaacgccgtca 1314660
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ccgccggcatcagcggcgcgccgc 221 |||||||||||||||||| ||||| Sbjct: 3809069 ccgccggcatcagcggcgagccgc 3809092
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 gcgcgagtacaaccgcaagg 557 |||||||||||||||||||| Sbjct: 1602418 gcgcgagtacaaccgcaagg 1602437
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aggacgcccacctccgcacc 30 |||||||||||||||||||| Sbjct: 2850624 aggacgcccacctccgcacc 2850643
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 262797 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 348 ggtttgtctcaaggatgttccacccaaacatctatgcagatgga 391 |||||||||| ||||||||| |||||||||||| || ||||| Sbjct: 180068 ggtttgtctctgagatgttccatccaaacatctatccaaatgga 180111
>dbj|AP004625.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT14E05b, TM0089b, complete sequence Length = 126514 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tgtcgacgccggcgaggaag 157 |||||||||||||||||||| Sbjct: 100824 tgtcgacgccggcgaggaag 100843 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,645,032 Number of Sequences: 3902068 Number of extensions: 3645032 Number of successful extensions: 68926 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67670 Number of HSP's gapped (non-prelim): 1239 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
