ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3f11 |
|---|---|
| Clone Library Name | barley_pub |
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 139 bits (349), Expect = 2e-33 Identities = 67/67 (100%), Positives = 67/67 (100%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG Sbjct: 1 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 60 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 61 FEKPSAI 67
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 135 bits (341), Expect = 2e-32 Identities = 65/67 (97%), Positives = 67/67 (100%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAGMAPEGSQFDAK+YDSKMQELL+QGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 60 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 61 FEKPSAI 67
>IF413_TOBAC (Q40466) Eukaryotic initiation factor 4A-13 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-13) (eIF-4A-13) (Fragment) Length = 355 Score = 111 bits (277), Expect = 5e-25 Identities = 55/67 (82%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 111 bits (277), Expect = 5e-25 Identities = 55/67 (82%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF414_TOBAC (Q40467) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) Length = 413 Score = 111 bits (277), Expect = 5e-25 Identities = 55/67 (82%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 111 bits (277), Expect = 5e-25 Identities = 55/67 (82%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG+APEGSQFDA+ YD+KM ELL E +EFFTSYDEV+ESFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQQEFFTSYDEVYESFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 111 bits (277), Expect = 5e-25 Identities = 55/67 (82%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 108 bits (270), Expect = 3e-24 Identities = 54/67 (80%), Positives = 58/67 (86%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG+APEGSQFD K YD KMQE+L TE+FFTSYD+V ESFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDDKQYDKKMQEIL----TEDFFTSYDDVCESFDSMGLQENLLRGIYAYG 56 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 57 FEKPSAI 63
>IF4A2_NICPL (P41379) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 413 Score = 108 bits (270), Expect = 3e-24 Identities = 54/67 (80%), Positives = 59/67 (88%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG APEGSQFDA+ +D+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGSQFDARQFDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 107 bits (266), Expect = 9e-24 Identities = 53/67 (79%), Positives = 59/67 (88%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG APEGSQFDA+ YDSKM ELL+ E ++FFTSYDEV+ SFD MGL+ENLLRGIYAYG Sbjct: 1 MAGAAPEGSQFDARQYDSKMTELLN-AEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 107 bits (266), Expect = 9e-24 Identities = 52/67 (77%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG APEGSQFDA+ +D+KM ELLS + ++FFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGAAPEGSQFDARQFDTKMNELLS-ADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 104 bits (259), Expect = 6e-23 Identities = 51/67 (76%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG APEG+QFDA+ +D K+ E+L +G+ +EFFTSYD+VHESFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL-EGQ-DEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 59 FEKPSAI 65
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 102 bits (255), Expect = 2e-22 Identities = 49/67 (73%), Positives = 60/67 (89%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MA +AP+G+QFDA+ YDSKM +LL+ + ++FFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MARLAPDGAQFDARQYDSKMNDLLA-ADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 60 FEKPSAI 66
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 102 bits (253), Expect = 3e-22 Identities = 49/67 (73%), Positives = 56/67 (83%) Frame = +2 Query: 149 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 328 MAG APEG+QFD + +D ++ E+L +EFFTSYDEVHESFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVLDG--QDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 58 Query: 329 FEKPSAI 349 FEKPSAI Sbjct: 59 FEKPSAI 65
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 57.4 bits (137), Expect = 9e-09 Identities = 27/45 (60%), Positives = 34/45 (75%) Frame = +2 Query: 215 LLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++ Q E T+YDEV ++FDDM L+ LLRGIYAYGFE+PSAI Sbjct: 1 MVDQLEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAI 45
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 57.4 bits (137), Expect = 9e-09 Identities = 26/48 (54%), Positives = 36/48 (75%) Frame = +2 Query: 206 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 M + L+ ++ + T+YDEV SFDD+GL++ LLRGIY YGFE PS+I Sbjct: 1 MADGLTDIDSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSI 48
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/56 (50%), Positives = 41/56 (73%) Frame = +2 Query: 182 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAI Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAI 58
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/56 (50%), Positives = 41/56 (73%) Frame = +2 Query: 182 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAI Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAI 58
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/56 (50%), Positives = 41/56 (73%) Frame = +2 Query: 182 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAI Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAI 58
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 55.1 bits (131), Expect = 4e-08 Identities = 25/33 (75%), Positives = 29/33 (87%) Frame = +2 Query: 251 SYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +YD+V ESFDDM L+E LLRGIY +GFEKPSAI Sbjct: 23 NYDQVVESFDDMELKEELLRGIYGFGFEKPSAI 55
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 55.1 bits (131), Expect = 4e-08 Identities = 24/34 (70%), Positives = 31/34 (91%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAI Sbjct: 17 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAI 50
>IF4A_ASPOR (Q2UPY3) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 54.7 bits (130), Expect = 6e-08 Identities = 27/53 (50%), Positives = 36/53 (67%) Frame = +2 Query: 191 NYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 N S++ L T + T+YDE+ +SFD M L+ LLRG+YAYGFE+PSAI Sbjct: 24 NVGSRLTRLFQS--TGQIETNYDEITDSFDAMELKPELLRGVYAYGFERPSAI 74
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 54.3 bits (129), Expect = 7e-08 Identities = 23/34 (67%), Positives = 32/34 (94%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAI Sbjct: 27 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAI 60
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 54.3 bits (129), Expect = 7e-08 Identities = 23/34 (67%), Positives = 32/34 (94%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAI Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAI 59
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 54.3 bits (129), Expect = 7e-08 Identities = 23/34 (67%), Positives = 32/34 (94%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAI Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAI 59
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 54.3 bits (129), Expect = 7e-08 Identities = 23/34 (67%), Positives = 32/34 (94%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAI Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAI 59
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/56 (48%), Positives = 40/56 (71%) Frame = +2 Query: 182 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 D+++ D+ + +G E ++++E+ +S DDM L E+LLRGIYAYGFEKPSAI Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAI 58
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 53.9 bits (128), Expect = 1e-07 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +++ EV+++FDDM L+E LLRGIY YGFEKPSAI Sbjct: 23 STWHEVYDNFDDMNLREELLRGIYGYGFEKPSAI 56
>IF4A_ASPFU (Q4WX43) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 406 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/51 (50%), Positives = 37/51 (72%) Frame = +2 Query: 197 DSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 + K E + +G+ E ++YDE+ +SFD M L+ LLRG+YAYGFE+PSAI Sbjct: 4 NDKGLEEIPEGQIE---SNYDEITDSFDAMDLKPELLRGVYAYGFERPSAI 51
>IF4A_YEAST (P10081) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1/2) (Stimulator factor I 37 kDa component) (p37) Length = 394 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/40 (60%), Positives = 30/40 (75%) Frame = +2 Query: 230 ETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E + T+YD+V FDDM L ENLLRG++ YGFE+PSAI Sbjct: 8 EESQIQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAI 47
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 52.8 bits (125), Expect = 2e-07 Identities = 23/34 (67%), Positives = 29/34 (85%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++YDE +SFD+M L+ LLRGIYAYGFE+PSAI Sbjct: 45 SNYDETVDSFDEMNLKPELLRGIYAYGFERPSAI 78
>IF4A_USTMA (Q4P331) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 411 Score = 52.4 bits (124), Expect = 3e-07 Identities = 29/72 (40%), Positives = 45/72 (62%) Frame = +2 Query: 134 PDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRG 313 P+ ++ A AP G + N ++ GE E ++++ V ++FD+M L+E LLRG Sbjct: 4 PEDTSAAAAAPAGEAGNNLN--------IADGEIE---SNWETVIDNFDNMELKEELLRG 52 Query: 314 IYAYGFEKPSAI 349 +YAYGFE+PSAI Sbjct: 53 VYAYGFERPSAI 64
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/38 (71%), Positives = 32/38 (84%), Gaps = 1/38 (2%) Frame = +2 Query: 239 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAI Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAI 64
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/38 (71%), Positives = 32/38 (84%), Gaps = 1/38 (2%) Frame = +2 Query: 239 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAI Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAI 64
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/38 (71%), Positives = 32/38 (84%), Gaps = 1/38 (2%) Frame = +2 Query: 239 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAI Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAI 64
>IF4A_EMENI (Q5B948) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 52.4 bits (124), Expect = 3e-07 Identities = 22/34 (64%), Positives = 29/34 (85%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++YDE+ +SFD M L+ LLRG+YAYGFE+PSAI Sbjct: 41 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAI 74
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 52.0 bits (123), Expect = 4e-07 Identities = 24/47 (51%), Positives = 34/47 (72%) Frame = +2 Query: 209 QELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +E + T E ++YDE+ E F+ + L+ +LLRGI+AYGFEKPSAI Sbjct: 11 EENVQVASTGEIESNYDEIVECFEALNLEGDLLRGIFAYGFEKPSAI 57
>IF4A_CANGA (Q6FQQ6) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = +2 Query: 218 LSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++Q + + T+YD+V FDDM L E LLRG++ YGF KPSAI Sbjct: 6 MTQLDESQIETNYDKVVYEFDDMNLNEKLLRGVFGYGFNKPSAI 49
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 51.2 bits (121), Expect = 6e-07 Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = +2 Query: 230 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E EF TS + VH +F+ M L+ENLLRGIYAYG+E PSA+ Sbjct: 13 ERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAV 53
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/48 (47%), Positives = 32/48 (66%) Frame = +2 Query: 206 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 M + ++ E E T+YD++ FD++ L+E LLRGIY YGF PSAI Sbjct: 1 MSDSITNPENSEIQTNYDKIVHKFDELKLKEVLLRGIYGYGFVDPSAI 48
>IF4A_CRYNE (Q5KN60) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 401 Score = 49.7 bits (117), Expect = 2e-06 Identities = 22/34 (64%), Positives = 30/34 (88%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++++EV ++FDDM L+ LLRGIYAYGFE+PSAI Sbjct: 21 SNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAI 54
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 48.5 bits (114), Expect = 4e-06 Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 2/46 (4%) Frame = +2 Query: 218 LSQGETEEFFTSYDEVH--ESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++ G+++ F S + V +FD MGL+E+LLRGIYAY FEKPSAI Sbjct: 5 INAGDSKLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAI 50
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 48.1 bits (113), Expect = 5e-06 Identities = 21/26 (80%), Positives = 24/26 (92%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 SFDDM L +NLLRGIY+YGFEKPS+I Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSI 52
>IF4A_KLULA (Q6CXT4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 47.8 bits (112), Expect = 7e-06 Identities = 22/48 (45%), Positives = 34/48 (70%) Frame = +2 Query: 206 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 M + ++ + + ++YD+V SFDD+ L+E LLRGI+ YGF +PSAI Sbjct: 1 MSDGITDIDENQIQSTYDKVVYSFDDLKLKEELLRGIFGYGFVEPSAI 48
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 47.8 bits (112), Expect = 7e-06 Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = +2 Query: 230 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E +F TS + VH +F+ M L+E+LLRGIYAYG+E PSA+ Sbjct: 12 EKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAV 52
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/34 (55%), Positives = 27/34 (79%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 T+YD V +FDD+ L+ N++RGI+ YG+E PSAI Sbjct: 16 TNYDNVVYTFDDLNLKPNIVRGIFGYGYESPSAI 49
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 46.6 bits (109), Expect = 2e-05 Identities = 24/38 (63%), Positives = 30/38 (78%), Gaps = 1/38 (2%) Frame = +2 Query: 239 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 EF TS D +V +F+ M L+++LLRGIYAYGFE PSAI Sbjct: 13 EFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAI 50
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/38 (60%), Positives = 30/38 (78%), Gaps = 1/38 (2%) Frame = +2 Query: 239 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+ Sbjct: 13 EFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAV 50
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/34 (55%), Positives = 26/34 (76%) Frame = +2 Query: 248 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 T+YD V FDD+ L+ N++RGI+ YG+E PSAI Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAI 49
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/38 (60%), Positives = 30/38 (78%), Gaps = 1/38 (2%) Frame = +2 Query: 239 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+ Sbjct: 13 EFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAV 50
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/38 (60%), Positives = 30/38 (78%), Gaps = 1/38 (2%) Frame = +2 Query: 239 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+ Sbjct: 14 EFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAV 51
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/29 (72%), Positives = 23/29 (79%) Frame = +2 Query: 263 VHESFDDMGLQENLLRGIYAYGFEKPSAI 349 V +F+ M LQENLLRGIY YGFE PSAI Sbjct: 21 VSPTFESMKLQENLLRGIYGYGFEAPSAI 49
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 45.4 bits (106), Expect = 3e-05 Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = +2 Query: 230 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E E TS D SF++M L+E+LLRGIYAYG+E PSA+ Sbjct: 7 ENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAV 47
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +VH +F+ M L+ +LL+GIYAYGFE PSAI Sbjct: 23 KVHRTFESMNLKPDLLKGIYAYGFETPSAI 52
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 44.3 bits (103), Expect = 8e-05 Identities = 18/26 (69%), Positives = 24/26 (92%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 SF +MG++++LLRG+Y YGFEKPSAI Sbjct: 19 SFAEMGIKDDLLRGVYQYGFEKPSAI 44
>FAL1_DEBHA (Q6BT27) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +VH +F+ M L+ +LL+GIY YGFE PSAI Sbjct: 23 KVHATFESMNLKTDLLKGIYGYGFEAPSAI 52
>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++ +F+ M L+E LLRGIY+YGFE PSAI Sbjct: 20 KISATFESMDLKEGLLRGIYSYGFEAPSAI 49
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = +2 Query: 263 VHESFDDMGLQENLLRGIYAYGFEKPSAI 349 V +F+ + L+E+LLRGIYAY FEKPSAI Sbjct: 21 VAPTFEALNLKEDLLRGIYAYNFEKPSAI 49
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 41.6 bits (96), Expect = 5e-04 Identities = 17/30 (56%), Positives = 25/30 (83%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +V +F+ M L+++LLRGIY+YGFE PS+I Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSI 49
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D+GL ENLL+G+YA F KPS I Sbjct: 101 FEDLGLDENLLKGLYAMKFNKPSKI 125
>FAL1_KLULA (Q6CX73) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +V +F+ M L+ +LLRGIY YGFE PS+I Sbjct: 20 KVSATFESMNLKPDLLRGIYFYGFEYPSSI 49
>DBP5_USTMA (Q4P7Z8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 456 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/27 (59%), Positives = 22/27 (81%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+ +GL ENLL+GIYA ++KPS I Sbjct: 64 KSFEALGLHENLLKGIYAMKYQKPSKI 90
>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 469 Score = 37.4 bits (85), Expect = 0.009 Identities = 15/27 (55%), Positives = 22/27 (81%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++GL E LL+G+YA F+KPS I Sbjct: 79 KSFEELGLSEELLKGLYAMKFQKPSKI 105
>DBP5_CANGA (Q6FKN8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 504 Score = 37.4 bits (85), Expect = 0.009 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SFD++GL LL+GIYA F+KPS I Sbjct: 114 KSFDELGLSPELLKGIYAMKFQKPSKI 140
>DBP5_YEAST (P20449) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-) (DEAD box| protein 5) (Helicase CA5/6) (Ribonucleic acid trafficking protein 8) Length = 482 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SFD++GL LL+GIYA F+KPS I Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKI 118
>DHH1_CRYNV (Q58Z64) ATP-dependent RNA helicase VAD1 (EC 3.6.1.-) (Virulence| associated DEAD box protein 1) Length = 616 Score = 35.4 bits (80), Expect = 0.035 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D GL+ LL GIY GFE+PS I Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPI 62
>DDX25_RAT (Q9QY16) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 35.4 bits (80), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++F+++ L+E LL+GIYA GF +PS I Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKI 123
>DDX25_HUMAN (Q9UHL0) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 35.4 bits (80), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++F+++ L+E LL+GIYA GF +PS I Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKI 123
>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 625 Score = 35.4 bits (80), Expect = 0.035 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D GL+ LL GIY GFE+PS I Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPI 62
>DDX25_MOUSE (Q9QY15) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 484 Score = 35.4 bits (80), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++F+++ L+E LL+GIYA GF +PS I Sbjct: 98 KTFEELRLKEELLKGIYAMGFNRPSKI 124
>DBP5_DEBHA (Q6BRE4) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 493 Score = 34.7 bits (78), Expect = 0.060 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++GL LL+G+YA F KPS I Sbjct: 103 KSFEELGLSSELLKGLYAMKFNKPSKI 129
>DBP5_ASHGO (Q75C39) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 467 Score = 34.7 bits (78), Expect = 0.060 Identities = 14/27 (51%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++GL LL+G+YA F+KPS I Sbjct: 79 KSFEELGLAPELLKGLYAMKFQKPSKI 105
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 34.3 bits (77), Expect = 0.078 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+D L+ LL GI+ GFEKPS I Sbjct: 30 KSFEDFNLKRELLMGIFEAGFEKPSPI 56
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 34.3 bits (77), Expect = 0.078 Identities = 14/27 (51%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF ++ L E+L++GI A GF+KPS I Sbjct: 148 QSFKELNLHEDLMKGIIAAGFQKPSKI 174
>DBP5_CANAL (Q5AJD0) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 540 Score = 34.3 bits (77), Expect = 0.078 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++GL LL+G+YA F KPS I Sbjct: 150 KSFEELGLSPELLKGLYAMKFNKPSKI 176
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 33.9 bits (76), Expect = 0.10 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%) Frame = +2 Query: 161 APEGSQFDAKNYDSKMQELLSQGETEEFFTSY----------DEVHESFDDMGLQENLLR 310 A E + D + + +E + EE Y + VH +F+ + L +L+ Sbjct: 173 AEEAVELDGVEFGDEQEEAREEDTAEEMAQFYAPSNEGEEAKNVVHSTFNSLSLSRPVLK 232 Query: 311 GIYAYGFEKPSAI 349 G+ A G+ KPS I Sbjct: 233 GLAALGYTKPSPI 245
>DHH1_KLULA (Q6CSZ7) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 514 Score = 33.5 bits (75), Expect = 0.13 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Frame = +2 Query: 170 GSQFDAKNYDSKMQELLSQGETEEFFTSYDEV----HESFDDMGLQENLLRGIYAYGFEK 337 GS N D K Q + + +T D+V SF+D L+ LL GI+ GFEK Sbjct: 2 GSDTSESNNDWKTQLNIPKKDTRP---QTDDVLNTKGRSFEDFYLKRELLMGIFEAGFEK 58 Query: 338 PSAI 349 PS I Sbjct: 59 PSPI 62
>DD19B_HUMAN (Q9UMR2) ATP-dependent RNA helicase DDX19B (EC 3.6.1.-) (DEAD box| protein 19B) (DEAD box RNA helicase DEAD5) Length = 479 Score = 33.5 bits (75), Expect = 0.13 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++ L+ LL+G+YA GF +PS I Sbjct: 92 KSFEELRLKPQLLQGVYAMGFNRPSKI 118
>DD19A_MOUSE (Q61655) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DEAD box RNA helicase DEAD5) (mDEAD5) (Eukaryotic translation initiation factor 4A-related sequence 1) Length = 478 Score = 33.5 bits (75), Expect = 0.13 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++ L+ LL+G+YA GF +PS I Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKI 117
>DD19A_HUMAN (Q9NUU7) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DDX19-like protein) Length = 478 Score = 33.5 bits (75), Expect = 0.13 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++ L+ LL+G+YA GF +PS I Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKI 117
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 32.7 bits (73), Expect = 0.23 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 17/83 (20%) Frame = +2 Query: 152 AGMAPEGSQFDAKNYDSKMQELLSQGETEE---------------FFTSYDEVHES--FD 280 AG E S+ D Y S+ +E+L++ +T + FF E +S F Sbjct: 131 AGSKDEDSETD---YSSEDEEILTKADTLKVKEKKKKKKGQAAGGFFEDASEYDKSLSFQ 187 Query: 281 DMGLQENLLRGIYAYGFEKPSAI 349 DM L LL+ I A GF++P+ I Sbjct: 188 DMNLSRPLLKAITAMGFKQPTPI 210
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 32.7 bits (73), Expect = 0.23 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 SF+D L+ LL GI+ GFEKPS I Sbjct: 32 SFEDFYLKRELLMGIFEAGFEKPSPI 57
>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 771 Score = 32.7 bits (73), Expect = 0.23 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +2 Query: 164 PEGSQFDAKNYDSKMQELLS-QGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKP 340 P Q D K + +++ + EE T+ ++H +F + L +L+G+ G+ KP Sbjct: 222 PGSDQEDEKPVEDTAEDMAEFYADEEEATTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKP 281 Query: 341 SAI 349 S I Sbjct: 282 SPI 284
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 32.3 bits (72), Expect = 0.30 Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 7/63 (11%) Frame = +2 Query: 182 DAKNYDSKMQELLSQGETEEFFT-------SYDEVHESFDDMGLQENLLRGIYAYGFEKP 340 DA + + K++E ++ E + F+ + EVH++F+D+ L +++G+ G+ KP Sbjct: 171 DAGDAEEKVEEDTAE-EMQAFYAPESESENAKKEVHKTFNDLALSRPVMKGLSNLGYVKP 229 Query: 341 SAI 349 S I Sbjct: 230 SPI 232
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 32.3 bits (72), Expect = 0.30 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +2 Query: 140 ASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIY 319 +SA + + K+ K ++ G E + YDE + SF DM L LL+ I Sbjct: 176 SSADENILTKADTLKVKDRKKKKKKGQEAGGFFEDASQYDE-NLSFQDMNLSRPLLKAIT 234 Query: 320 AYGFEKPSAI 349 A GF++P+ I Sbjct: 235 AMGFKQPTPI 244
>DDX39_HUMAN (O00148) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase URH49) Length = 427 Score = 32.0 bits (71), Expect = 0.39 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Frame = +2 Query: 158 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 319 MA + + D +YD + + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 320 AYGFEKPSAI 349 GFE PS + Sbjct: 61 DCGFEHPSEV 70
>DBP5_SCHPO (Q09747) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 503 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+++ L+ LL+GIY+ F+KPS I Sbjct: 114 KSFEELELKPELLKGIYSMKFQKPSKI 140
>DBP5_ASPOR (Q2U8K6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 487 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 +SF+D+GL +L+G+ A F KPS I Sbjct: 78 KSFEDLGLDPRILQGLSAMNFRKPSKI 104
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 31.6 bits (70), Expect = 0.51 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 +F+D L+ LL GI+ GFEKPS I Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPI 72
>DBP5_GIBZE (Q4HY71) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 31.6 bits (70), Expect = 0.51 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%) Frame = +2 Query: 107 PSGDPRHLLPDASAMAGMAPE------GSQFDAKNYDSKMQ-ELLSQGETEEFFTSYDEV 265 P+ P P AS G A GS +D ++ L E F ++ Sbjct: 19 PAETPAETAPAASGELGQADGNIEDLGGSGLQEPEWDVEVSLSELQNNEATPFHSA---- 74 Query: 266 HESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++ D+GL+E+LL+G+ + F KPS + Sbjct: 75 -TTWQDLGLREDLLKGLLSLNFLKPSKV 101
>DBP5_NEUCR (Q8X0X2) ATP-dependent RNA helicase dbp-5 (EC 3.6.1.-)| Length = 483 Score = 31.6 bits (70), Expect = 0.51 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 SFD++GL E + RG+ A F+KPS + Sbjct: 75 SFDELGLPEAVNRGLLAINFKKPSKV 100
>SYS_RICCN (Q92GA7) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 425 Score = 31.2 bits (69), Expect = 0.66 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Frame = +2 Query: 128 LLPDASAMAGMAPEGSQFDAKNYDSKM----QELLSQGETEEFFTSYDEVHESFDDMGLQ 295 +L + ++ +G EG Q D K+ + K+ Q+L + E E + + + G+ Sbjct: 57 ILGNMASKSGEEFEGLQRDVKHINEKLEALEQDLNNNNELNELLNMFPNIPDDEVPYGMD 116 Query: 296 ENLLRGIYAYGFEKPSAI 349 E++ + + YG P+A+ Sbjct: 117 ESMNKLVRTYGETNPNAL 134
>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)| Length = 676 Score = 31.2 bits (69), Expect = 0.66 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 9/71 (12%) Frame = +2 Query: 164 PEGSQFDAKNYDSKMQELLSQ---------GETEEFFTSYDEVHESFDDMGLQENLLRGI 316 PE +Q A+ + QEL Q + E+ + D+ +F D+GL L++ + Sbjct: 51 PEATQQQAQQQTEEEQELEQQLKDEQKQQDEKDEKKQSEKDDADLTFSDLGLDPRLVQAV 110 Query: 317 YAYGFEKPSAI 349 FEKP+ + Sbjct: 111 AKQSFEKPTLV 121
>SUB2_YARLI (Q6CH89) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 441 Score = 31.2 bits (69), Expect = 0.66 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 164 PEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKP 340 P + N D+K + + E E SY +H + F D L+ LLR I GFE P Sbjct: 21 PSTTVESGSNGDAKAETTTVKEENTEQKGSYVGIHSTGFRDFLLKPELLRAIVDCGFEHP 80 Query: 341 SAI 349 S + Sbjct: 81 SEV 83
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 30.8 bits (68), Expect = 0.86 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 E+FD+ G + +L + A GFEKP+AI Sbjct: 140 ETFDEAGFPQYVLSEVKAQGFEKPTAI 166
>DBP80_DROME (O61305) DEAD-box helicase Dbp80 (EC 3.6.1.-)| Length = 460 Score = 30.8 bits (68), Expect = 0.86 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++F+ + L+ +LL+GIYA GF PS I Sbjct: 73 KTFEALHLKASLLKGIYAMGFNTPSKI 99
>DHH1_GIBZE (Q4HW67) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 486 Score = 30.8 bits (68), Expect = 0.86 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F++ L+ +LL GI+ GFEKPS I Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPI 68
>DBP5_EMENI (Q5AVM1) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 477 Score = 30.8 bits (68), Expect = 0.86 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++F+D+GL +L+G+ A F KPS I Sbjct: 69 KNFEDLGLDPRILQGLSAMNFRKPSKI 95
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 +F+D L+ LL GI+ GFE+PS I Sbjct: 30 TFEDFYLRRELLMGIFEAGFERPSPI 55
>GAC1_YEAST (P28006) Serine/threonine-protein phosphatase 1 regulatory subunit| GAC1 Length = 793 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 Query: 33 CQSPHRLRSHAAESET*SRIHRSATPPAIRGTSSPTLQP 149 C SP + A E T R ++A P +I +SPTL P Sbjct: 64 CTSPEKNVRFAIELTTVKRFDKNAEPSSISNENSPTLSP 102
>DDX39_RAT (Q5U216) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase, DECD variant of DEAD box family) Length = 427 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Frame = +2 Query: 158 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 319 MA + + + +YD + + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENELLDYDEDEEPQVPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 320 AYGFEKPSAI 349 GFE PS + Sbjct: 61 DCGFEHPSEV 70
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/71 (26%), Positives = 34/71 (47%) Frame = +2 Query: 137 DASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGI 316 DA + E + D +N D ++Q+ ++ + S ++ E F D+ L EN+ + I Sbjct: 51 DADQNTSVESESEELDNENEDERVQKSVNLNAS-----STSDI-EKFSDLQLSENIQKAI 104 Query: 317 YAYGFEKPSAI 349 GFE + I Sbjct: 105 KEMGFETMTEI 115
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +2 Query: 200 SKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +K ++G+ E+ + H SF M L +L+G+ GFE P+ I Sbjct: 238 AKKNAFFAEGDKEKSMMT--TTHSSFQSMNLSRPILKGLSNLGFEVPTQI 285
>DBP5_ASPFU (Q4WIN6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 511 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 ++F+D+GL +L+G+ + F KPS I Sbjct: 99 KNFEDLGLDPRILKGLSSMNFRKPSKI 125
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 E+FD+ G + +L + A GFE+P+AI Sbjct: 121 ENFDEAGFPQYVLSEVKAQGFERPTAI 147
>DHH1_ASPFU (Q4WWD3) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 507 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D ++ L+ GI+ GFEKPS I Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPI 73
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/61 (24%), Positives = 28/61 (45%) Frame = +2 Query: 167 EGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSA 346 +G D D+ + EE + VH++F + L +++GI A G++ P+ Sbjct: 218 KGPAIDEGPQDTAEEMAAFYAPEEENNDKTESVHKTFQTLNLSRPVMKGISALGYQAPTP 277 Query: 347 I 349 I Sbjct: 278 I 278
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +2 Query: 269 ESFDDMGLQENLLRGIYAYGFEKPSAI 349 E+FD+ G + +L + A GFE+P+AI Sbjct: 130 ETFDEAGFPQYVLSEVKAQGFERPTAI 156
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 10/71 (14%) Frame = +2 Query: 167 EGSQFD---AKNYDSKMQELLSQGETEEFFTSYDE-------VHESFDDMGLQENLLRGI 316 E SQ D K+ D ++E + E EF+ +E VH++F+ + L +L+G+ Sbjct: 190 EMSQADLGKGKDEDEDIEEDTKE-EMAEFYAPEEESADAKKIVHKTFNSLSLSRPVLKGL 248 Query: 317 YAYGFEKPSAI 349 + G+ PS I Sbjct: 249 GSLGYTSPSPI 259
>DHH1_ASPOR (Q2U5A2) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 511 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D ++ L+ GI+ GFEKPS I Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPI 73
>DHH1_SCHPO (Q09181) Putative ATP-dependent RNA helicase ste13 (EC 3.6.1.-)| Length = 485 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D L+ LL GI+ GFE+PS I Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPI 70
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 +F MGL + LLR I+ GF+ P+ I Sbjct: 70 NFQSMGLNQTLLRAIFKKGFKAPTPI 95
>DDX39_MOUSE (Q8VDW0) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) Length = 427 Score = 29.3 bits (64), Expect = 2.5 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Frame = +2 Query: 158 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 319 MA + + + +YD + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 320 AYGFEKPSAI 349 GFE PS + Sbjct: 61 DCGFEHPSEV 70
>DDX6_XENLA (P54824) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Xp54) Length = 481 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D L+ LL GI+ G+EKPS I Sbjct: 97 FEDYCLKRELLMGIFEMGWEKPSPI 121
>DHH1_YARLI (Q6C0X2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 522 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D L+ LL GI+ GFE PS I Sbjct: 30 FEDFFLKRELLMGIFEAGFENPSPI 54
>DDX6_MOUSE (P54823) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) Length = 483 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D L+ LL GI+ G+EKPS I Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPI 122
>DDX6_HUMAN (P26196) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK) Length = 483 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 275 FDDMGLQENLLRGIYAYGFEKPSAI 349 F+D L+ LL GI+ G+EKPS I Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPI 122
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 28.9 bits (63), Expect = 3.3 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 +F+D+GL E +L+ + GFE PS I Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPI 31
>ATPG_RHOPA (Q6NDD1) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 291 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 4/76 (5%) Frame = +2 Query: 116 DPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFF----TSYDEVHESFDD 283 D HLL + G++ + + + EL+SQG+T +FF Y+++ +F+ Sbjct: 76 DQVHLLLVCTGERGLSGAFNSSIVRLARERAYELMSQGKTVKFFCVGRKGYEQLRRNFEK 135 Query: 284 MGLQENLLRGIYAYGF 331 + LR + GF Sbjct: 136 QIIDNVELRSVRQIGF 151
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 28.9 bits (63), Expect = 3.3 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 +FD+ G E +L+ + GFEKP+AI Sbjct: 115 TFDEAGFPEYVLKEVKEEGFEKPTAI 140
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 28.9 bits (63), Expect = 3.3 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Frame = +2 Query: 137 DASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVH-------ESFDDMGLQ 295 D+ A P+ DA + + +E + + + FF +E + SF M L Sbjct: 208 DSVATPTNHPDDDASDASDDEEDAEE---EAKRKAFFAPEEENNPDKKATASSFQTMSLS 264 Query: 296 ENLLRGIYAYGFEKPSAI 349 ++RG+ + GF KP+ I Sbjct: 265 RPIMRGLASVGFTKPTPI 282
>VCXC_HUMAN (Q9H321) VCX-C protein (Variably charged protein X-C)| Length = 216 Score = 28.5 bits (62), Expect = 4.3 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +2 Query: 119 PRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQ-GETEEFFTSYDEVHE 271 P+H LP ++ EG+Q D + +S+++E LSQ E EE + +V E Sbjct: 85 PQHELPPEEPVS----EGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEE 132
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 28.5 bits (62), Expect = 4.3 Identities = 21/82 (25%), Positives = 33/82 (40%) Frame = +2 Query: 104 DPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDD 283 D P H D +A + S+ DA+ + + EE T+ + SF D Sbjct: 259 DSVATPVHHPDDEAASDEESEAESEVDAEEAEKRKAFFAP----EEKSTAVSTFNRSFQD 314 Query: 284 MGLQENLLRGIYAYGFEKPSAI 349 L +LRG+ + F P+ I Sbjct: 315 FNLSRPILRGLASVNFTTPTPI 336
>UAP56_RAT (Q63413) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_PONPY (Q5RE47) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_PIG (Q29024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_PANTR (P60024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_MOUSE (Q9Z1N5) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (HLA-B-associated transcript 1) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_MACMU (Q5TM17) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_HUMAN (Q13838) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (HLA-B-associated transcript-1) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_CHICK (Q5ZHZ0) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>UAP56_CANFA (Q5WR10) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 251 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 SY +H S F D L+ LLR I GFE PS + Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 71
>VCX3_HUMAN (Q9NNX9) Variable charge X-linked protein 3 (VCX-A protein)| (Variably charged protein X-A) (Variable charge protein on X with eight repeats) (VCX-8r) Length = 186 Score = 28.5 bits (62), Expect = 4.3 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +2 Query: 119 PRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQ-GETEEFFTSYDEVHE 271 P+H LP ++ EG+Q D + +S+++E LSQ E EE + +V E Sbjct: 85 PQHELPPEEPVS----EGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEE 132
>VCX2_HUMAN (Q9H322) Variable charge X-linked protein 2 (VCX-B protein)| (Variably charged protein X-B) (Variable charge protein on X with two repeats) (VCX-2r) Length = 139 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%) Frame = +2 Query: 119 PRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQ-GETEE----FFTSYDEVHESFD 280 P+H LP ++ EG+Q D + +++++E LSQ E EE + S+ V ES D Sbjct: 85 PQHELPPEEPVS----EGTQHDPPSQEAELEEPLSQESEVEEPLTVWMASFSPVSESSD 139
>SPEG_BRARE (Q696W0) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) Length = 2995 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -2 Query: 294 WRPMSSKLS*TSSYEVKNSSVSPWLSSSCILES*FFASNWEPSGAIPAMAEASGRRCRGS 115 W+P +K+ T + E K WL+ + + FF S+ PSG+ A + S Sbjct: 2438 WKPSDTKVPCTYTIEKKFDGDDKWLTEATGVTDCFFNSSELPSGSTIRFRVACVNKAGQS 2497 Query: 114 P 112 P Sbjct: 2498 P 2498
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Frame = +2 Query: 230 ETEEFFTSYD--EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E+E T +D + +FD+ G + +L+ + A GF+KP++I Sbjct: 95 ESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSI 136
>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency| of ribosomal subunits protein 1) Length = 752 Score = 28.1 bits (61), Expect = 5.6 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 +++E+F+ + L +L+G+ + G+ KPS I Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPI 257
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 34 ANPLIASAPTPPNPRPDLGFT 96 A P+ +PTPP PRP G T Sbjct: 814 AKPMPKGSPTPPGPRPTAGQT 834
>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (MHC class I regulatory element-binding protein H-2RIIBP) Length = 520 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +1 Query: 31 PANPLIASAPTPPNPRPDLG 90 P PL SAP PP P P LG Sbjct: 98 PGPPLTPSAPPPPMPPPPLG 117
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 +F+++ L +N+L I GFEKP+ I Sbjct: 7 NFNELNLSDNILNAIRNKGFEKPTDI 32
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E +F D+GL+ +L + G+EKPS I Sbjct: 2 EFETTFADLGLKAPILEALTDLGYEKPSPI 31
>SUB2_SCHPO (O13792) ATP-dependent RNA helicase uap56 (EC 3.6.1.-)| Length = 434 Score = 27.7 bits (60), Expect = 7.3 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +2 Query: 227 GETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 349 GE + SY +H + F D L+ LLR I GFE PS + Sbjct: 36 GEKSDKKGSYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEV 77
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E +F D+GL+ +L + G+EKPS I Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPI 31
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E +F D+GL+ +L + G+EKPS I Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPI 31
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E +F D+GL+ +L + G+EKPS I Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPI 31
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 260 EVHESFDDMGLQENLLRGIYAYGFEKPSAI 349 E +F D+GL+ +L + G+EKPS I Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPI 31
>ZMYM6_HUMAN (O95789) Zinc finger MYM-type protein 6 (Zinc finger protein 258)| Length = 723 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/40 (32%), Positives = 26/40 (65%) Frame = +3 Query: 99 SATPPAIRGTSSPTLQPWQEWHRKVPSLMQRTMILRCRSC 218 + +P +IRG+++ +LQP E ++V +L + L+C+ C Sbjct: 395 AVSPSSIRGSAAASLQPLGEQSQQV-ALTHTVVKLKCQHC 433
>VCX1_HUMAN (Q9H320) Variable charge X-linked protein 1 (VCX-B1 protein)| (Variably charged protein X-B1) (Variable charge protein on X with ten repeats) (VCX-10r) Length = 206 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +2 Query: 119 PRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQ-GETEEFFTSYDEVHE 271 P+H LP ++ EG+Q D + +++++E LSQ E EE + +V E Sbjct: 85 PQHELPPEEPVS----EGTQHDPLSQEAELEEPLSQESEVEEPLSQESQVEE 132
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +2 Query: 272 SFDDMGLQENLLRGIYAYGFEKPSAI 349 SFD +GL ++LR + G+ +P+ I Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPI 27
>SUB2_ASPFU (Q4WCW2) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 448 Score = 27.3 bits (59), Expect = 9.5 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +2 Query: 140 ASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHES-FDDMGLQENLLRGI 316 A+ A A G+Q K +L G + SY +H + F D L+ LLR I Sbjct: 21 AATTAAPAANGAQ-------DKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAI 73 Query: 317 YAYGFEKPSAI 349 GFE PS + Sbjct: 74 TDCGFEHPSEV 84 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,531,953 Number of Sequences: 219361 Number of extensions: 898351 Number of successful extensions: 3625 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 3434 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3610 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
