ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3f07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1126 bits (568), Expect = 0.0 Identities = 580/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 120047 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 119988 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119987 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 119928 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119927 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119868 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119867 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119808 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119807 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119748 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119747 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119688 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119687 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119628 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119627 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119568 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119567 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 119509 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119508 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 119466 Score = 1126 bits (568), Expect = 0.0 Identities = 580/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 94847 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 94906 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94907 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 94966 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94967 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95026 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95027 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95086 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95087 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95146 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95147 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95206 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95207 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95266 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95267 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95326 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95327 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 95385 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95386 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 95428
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 899 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 898 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 839 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 779 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 719 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 659 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 658 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 599 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 539 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 479 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 478 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 420 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 377
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 44872 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 44813 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 44812 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 44753 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44752 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 44693 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44692 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 44633 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44632 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 44573 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 44572 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 44513 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44512 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 44453 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44452 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 44393 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 44392 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 44334 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44333 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 44291 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 20246 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 20305 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20306 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 20365 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20366 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 20425 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20426 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 20485 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20486 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 20545 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20546 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 20605 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20606 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 20665 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20666 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 20725 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 20726 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 20784 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20785 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 20827
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 1442 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1441 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 1382 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 1322 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 1262 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 1202 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1201 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 1142 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 1082 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 1022 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1021 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 963 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 920
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123711 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 123652 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123651 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 123592 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123591 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 123532 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123531 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 123472 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123471 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 123412 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123411 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 123352 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123351 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 123292 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123291 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 123232 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123231 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 123173 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123172 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 123130 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99126 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 99185 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99186 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 99245 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99246 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 99305 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99306 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 99365 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99366 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 99425 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99426 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 99485 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99486 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 99545 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99546 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 99605 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99606 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 99664 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99665 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 99707
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 124428 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 124369 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 124368 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 124309 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124308 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 124249 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124248 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 124189 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124188 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 124129 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 124128 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 124069 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124068 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 124009 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124008 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 123949 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123948 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 123890 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123889 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 123847 Score = 1118 bits (564), Expect = 0.0 Identities = 579/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99803 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 99862 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99863 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 99922 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99923 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 99982 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 100042 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 100102 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100103 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 100162 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100163 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 100222 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100223 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 100282 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 100283 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 100341 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100342 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 100384
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118828 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 118769 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118768 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 118709 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118708 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 118649 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118648 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 118589 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118588 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 118529 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118528 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 118469 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118468 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 118409 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118408 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 118349 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118348 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 118290 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118289 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 118247
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119912 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 119853 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119852 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 119793 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119792 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119733 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119732 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119673 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119672 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119613 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119612 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119553 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119493 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119492 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119433 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119432 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 119374 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119373 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 119331 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95244 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 95303 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95304 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 95363 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95364 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95423 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95424 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95483 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95484 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95543 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95544 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95603 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95604 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95663 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95664 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95723 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95724 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 95782 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95783 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 95825
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119912 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 119853 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119852 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 119793 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119792 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119733 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119732 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119673 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119672 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119613 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119612 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119553 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119493 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119492 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119433 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119432 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 119374 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119373 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 119331 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95244 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 95303 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95304 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 95363 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95364 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95423 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95424 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95483 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95484 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95543 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95544 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95603 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95604 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95663 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95664 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95723 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95724 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 95782 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95783 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 95825
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119861 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 119802 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119801 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 119742 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119741 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119682 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119681 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119622 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119621 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119562 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119561 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119502 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119501 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119442 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119441 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119382 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119381 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 119323 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119322 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 119280 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95189 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 95248 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95249 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 95308 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95309 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95368 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95369 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95428 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95429 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95488 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95489 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95548 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95549 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95608 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95609 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95668 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95669 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 95727 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95728 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 95770
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507822 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 31507881 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31507882 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 31507941 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507942 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 31508001 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508002 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 31508061 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508062 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 31508121 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31508122 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 31508181 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508182 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 31508241 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508242 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 31508301 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 31508302 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 31508360 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508361 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 31508403
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 84774 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 84715 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 84714 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 84655 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84654 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 84595 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84594 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 84535 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84534 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 84475 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 84474 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 84415 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84414 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 84355 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84354 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 84295 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 84294 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 84236 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84235 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 84193
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119881 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 119822 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119821 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 119762 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119761 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119702 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119701 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119642 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119641 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119582 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119581 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119522 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119521 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119462 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119461 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119402 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119401 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 119343 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119342 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 119300 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95237 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 95296 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95297 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 95356 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95357 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95416 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95417 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95476 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95477 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95536 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95537 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95596 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95597 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95656 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95657 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95716 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95717 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 95775 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95776 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 95818
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122286 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 122345 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122346 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 122405 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122406 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 122465 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122466 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 122525 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122526 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 122585 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122586 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 122645 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122646 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 122705 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122706 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 122765 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 122766 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 122824 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122825 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 122867 Score = 1102 bits (556), Expect = 0.0 Identities = 577/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14011 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 14070 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 14071 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 14130 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14131 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 14190 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14191 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 14250 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14251 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 14310 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 14311 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 14370 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14371 gtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaat 14430 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14431 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 14490 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 14491 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 14549 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14550 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 14592
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 58600 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 58541 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 58540 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 58481 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58480 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 58421 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58420 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 58361 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58360 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 58301 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 58300 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 58241 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58240 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 58181 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58180 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 58121 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 58120 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 58062 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58061 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 58019
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268171 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 9268230 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9268231 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 9268290 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268291 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9268350 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268351 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9268410 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268411 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9268470 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9268471 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9268530 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268531 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9268590 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268591 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9268650 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9268651 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 9268709 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268710 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 9268752 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227671 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 9227730 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9227731 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 9227790 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227791 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9227850 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227851 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9227910 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227911 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9227970 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9227971 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9228030 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228031 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9228090 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228091 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9228150 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9228151 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 9228209 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228210 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 9228252 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164260 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 9164319 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9164320 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 9164379 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164380 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9164439 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164440 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9164499 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164500 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9164559 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9164560 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9164619 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164620 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9164679 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164680 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9164739 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9164740 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 9164798 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164799 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 9164841 Score = 1102 bits (556), Expect = 0.0 Identities = 577/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056085 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 9056144 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9056145 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 9056204 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056205 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9056264 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056265 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9056324 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056325 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9056384 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9056385 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9056444 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9056445 gtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaat 9056504 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056505 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9056564 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9056565 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 9056623 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056624 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 9056666 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 439 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 498 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 499 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 544 |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggg 25171408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938156 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 19938215 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19938216 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 19938275 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938276 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 19938335 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938336 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 19938395 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938396 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 19938455 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19938456 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 19938515 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938516 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 19938575 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938576 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 19938635 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19938636 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 19938694 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938695 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 19938737 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277275 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 10277216 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10277215 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 10277156 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277155 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10277096 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277095 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10277036 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277035 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10276976 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10276975 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10276916 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276915 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10276856 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276855 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 10276796 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10276795 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 10276737 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276736 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 10276694 Score = 1102 bits (556), Expect = 0.0 Identities = 577/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387023 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 10387082 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10387083 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 10387142 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10387202 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10387262 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387263 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10387322 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10387323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10387382 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10387442 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10387443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 10387502 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10387503 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 10387561 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387562 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 10387604 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 457 agtaccgtgagggaaaggtgaaaagaacccc 487 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ttgtgctgctaggcgaagcggttgagtgc 310 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598338 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 31598397 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31598398 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 31598457 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598458 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 31598517 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598518 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 31598577 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598578 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 31598637 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31598638 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 31598697 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598698 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 31598757 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598758 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 31598817 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 31598818 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 31598876 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598877 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 31598919
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525654 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 33525713 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33525714 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 33525773 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525774 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 33525833 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525834 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 33525893 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525894 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 33525953 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33525954 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 33526013 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526014 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 33526073 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526074 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 33526133 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 33526134 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 33526192 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526193 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 33526235 Score = 234 bits (118), Expect = 3e-58 Identities = 131/134 (97%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 461 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 520 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 521 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 580 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 16677983 Query: 581 agccggcgactcat 594 |||||||||||||| Sbjct: 16677982 agccggcgactcat 16677969 Score = 180 bits (91), Expect = 3e-42 Identities = 107/111 (96%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 475 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 534 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 535 gtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 585 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 468 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 506 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 32 acgaggaagggcgtagcaagcgacgaaatgcttc 65 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 47887 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 47828 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 47827 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 47768 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47767 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 47708 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47707 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 47648 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47647 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 47588 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 47587 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 47528 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47527 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 47468 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47467 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 47408 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 47407 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 47349 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47348 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 47306
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 70851 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 70910 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 70911 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 70970 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70971 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 71030 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71031 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 71090 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71091 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 71150 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 71151 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 71210 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71211 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 71270 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71271 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 71330 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 71331 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 71389 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71390 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 71432 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 83 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 142 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 322 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 382 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 502 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 503 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 561 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 604
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 79 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 80 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 139 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 199 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 259 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 319 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 320 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 379 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 439 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 499 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 500 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 558 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 601
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949432 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 19949491 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19949492 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 19949551 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949552 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 19949611 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949612 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 19949671 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949672 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 19949731 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19949732 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 19949791 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949792 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 19949851 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949852 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 19949911 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19949912 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 19949970 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949971 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 19950013 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283314 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 10283255 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10283254 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 10283195 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283194 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10283135 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283134 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10283075 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283074 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10283015 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10283014 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10282955 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282954 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10282895 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282894 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 10282835 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10282834 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 10282776 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282775 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 10282733 Score = 1102 bits (556), Expect = 0.0 Identities = 577/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393062 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 10393121 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10393122 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 10393181 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393182 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10393241 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393242 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10393301 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393302 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10393361 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10393362 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10393421 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393422 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10393481 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10393482 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 10393541 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10393542 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 10393600 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393601 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 10393643 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 ttgtgctgctaggcgaagcggttgagtgc 310 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119855 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 119796 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119795 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 119736 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119676 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119616 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119615 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119556 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119555 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119496 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119436 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119435 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119376 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119375 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 119317 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119316 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 119274 Score = 1110 bits (560), Expect = 0.0 Identities = 578/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95184 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 95243 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95244 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 95303 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95304 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95363 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95364 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95423 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95424 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95483 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95484 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95543 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95544 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95603 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95604 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95663 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95664 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 95722 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95723 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 95765
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1102 bits (556), Expect = 0.0 Identities = 577/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140819 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 140878 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 140879 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 140938 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140939 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 140998 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140999 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 141058 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141059 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 141118 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141119 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 141178 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141179 gtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaat 141238 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141239 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 141298 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141299 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 141357 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141358 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 141400
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1102 bits (556), Expect = 0.0 Identities = 577/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 93415 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 93474 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 93475 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 93534 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93535 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 93594 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93595 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 93654 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93655 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 93714 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 93715 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 93774 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93775 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 93834 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 93835 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 93894 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 93895 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 93953 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93954 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 93996
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1102 bits (556), Expect = 0.0 Identities = 577/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27479 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 27538 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 27539 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 27598 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27599 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 27658 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27659 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 27718 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27719 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 27778 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 27779 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 27838 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27839 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 27898 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27899 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 27958 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 27959 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 28017 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28018 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 28060
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1094 bits (552), Expect = 0.0 Identities = 576/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242110 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 9242051 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9242050 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 9241991 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241990 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9241931 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9241930 agaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtga 9241871 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241870 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9241811 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9241810 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9241751 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241750 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9241691 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241690 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9241631 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9241630 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 9241572 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9241571 atctctgaccgcgtgcctgttgaagaatgagctggcgactcat 9241529 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 164 actgaaacatcttagtagccagaggaaaagaaag 197 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1094 bits (552), Expect = 0.0 Identities = 576/583 (98%), Gaps = 1/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 53323 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 53264 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 53263 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 53204 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53203 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 53144 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 53143 agaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtga 53084 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53083 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 53024 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 53023 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 52964 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52963 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 52904 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52903 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 52844 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52843 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtg 52785 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52784 atctctgaccgcgtgcctgttgaagaatgagctggcgactcat 52742
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1067 bits (538), Expect = 0.0 Identities = 557/562 (99%), Gaps = 1/562 (0%) Strand = Plus / Plus Query: 33 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 93 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 152 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 153 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 213 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 273 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 332 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 333 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 392 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 393 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 453 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 513 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 572 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtggga-ggggaaattgatctctgaccgcgtgcctgtt 539 Query: 573 gaagaatgagccggcgactcat 594 |||||||||||||||||||||| Sbjct: 540 gaagaatgagccggcgactcat 561
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1057 bits (533), Expect = 0.0 Identities = 574/584 (98%), Gaps = 3/584 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgggga 70 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 123651 ggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgggga 123592 Query: 71 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123591 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgcc 123532 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123531 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 123472 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123471 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 123412 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123411 aaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 123352 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 ||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||| Sbjct: 123351 cgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccg 123293 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123292 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 123233 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123232 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 123173 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123172 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagt 123114 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123113 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 123070 Score = 1057 bits (533), Expect = 0.0 Identities = 574/584 (98%), Gaps = 3/584 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgggga 70 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 99086 ggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgggga 99145 Query: 71 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99146 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgcc 99205 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99206 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 99265 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99266 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 99325 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99326 aaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 99385 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 ||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||| Sbjct: 99386 cgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccg 99444 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99445 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 99504 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99505 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 99564 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 99565 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagt 99623 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99624 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 99667
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1057 bits (533), Expect = 0.0 Identities = 574/584 (98%), Gaps = 3/584 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgggga 70 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 5439 ggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgggga 5498 Query: 71 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5499 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgcc 5558 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5559 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 5618 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5619 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 5678 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5679 aaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 5738 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 ||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||| Sbjct: 5739 cgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccg 5797 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5798 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 5857 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5858 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 5917 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5918 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagt 5976 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5977 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 6020
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1057 bits (533), Expect = 0.0 Identities = 574/584 (98%), Gaps = 3/584 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgggga 70 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 27 ggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgggga 86 Query: 71 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 87 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgcc 146 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 206 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 266 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 aaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 326 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 ||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||| Sbjct: 327 cgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccg 385 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 445 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 505 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 506 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagt 564 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 608
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 983 bits (496), Expect = 0.0 Identities = 509/512 (99%), Gaps = 1/512 (0%) Strand = Plus / Plus Query: 83 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 142 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 143 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 203 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 263 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 323 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 382 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 383 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 443 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 503 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccg 562 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccg 479 Query: 563 cgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcat 511
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 967 bits (488), Expect = 0.0 Identities = 504/508 (99%), Gaps = 1/508 (0%) Strand = Plus / Plus Query: 87 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 146 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 147 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 207 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 267 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 327 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 386 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 387 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 447 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 507 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtg 566 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtg 479 Query: 567 cctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||| Sbjct: 480 cctgttgaagaatgagccggcgactcat 507
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 948 bits (478), Expect = 0.0 Identities = 489/493 (99%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 24 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 83 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 84 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 143 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 203 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 263 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 323 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 324 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 383 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 443 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 503 Query: 492 gggtagtgaaata 504 ||||||||||||| Sbjct: 504 gggtagtgaaata 516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 940 bits (474), Expect = 0.0 Identities = 558/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139561 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 139502 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 139501 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 139443 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139442 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 139383 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139382 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 139323 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 139322 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtact 139263 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 139262 gcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccga 139203 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139202 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 139143 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139142 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 139083 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||| || ||| || Sbjct: 139082 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttg 139027 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139026 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 138984 Score = 940 bits (474), Expect = 0.0 Identities = 558/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110384 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 110443 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 110444 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 110502 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110503 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110562 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110563 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110622 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 110623 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtact 110682 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 110683 gcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccga 110742 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110743 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 110802 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110803 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 110862 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||| || ||| || Sbjct: 110863 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttg 110918 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110919 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 110961
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 940 bits (474), Expect = 0.0 Identities = 558/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127839 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 127780 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 127779 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 127721 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127720 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 127661 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 127660 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtga 127601 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 127600 aaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgct 127541 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 127540 gcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccga 127481 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127480 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 127421 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127420 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 127361 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||| || ||| ||| Sbjct: 127360 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatgtg 127305 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127304 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 127262 Score = 940 bits (474), Expect = 0.0 Identities = 558/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107083 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 107142 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 107143 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 107201 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107202 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 107261 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 107262 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtga 107321 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 107322 aaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgct 107381 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 107382 gcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccga 107441 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107442 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 107501 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107502 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 107561 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||| || ||| ||| Sbjct: 107562 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatgtg 107617 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107618 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 107660
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 940 bits (474), Expect = 0.0 Identities = 558/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134198 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 134139 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 134138 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 134080 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134079 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 134020 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134019 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 133960 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 133959 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgct 133900 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133899 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 133840 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133839 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 133780 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133779 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 133720 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| ||| Sbjct: 133719 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatgtg 133664 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133663 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 133621 Score = 940 bits (474), Expect = 0.0 Identities = 558/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103773 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 103832 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 103833 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 103891 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103892 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 103951 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103952 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104011 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 104012 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgct 104071 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104072 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 104131 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104132 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104191 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104192 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 104251 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| ||| Sbjct: 104252 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatgtg 104307 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104308 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 104350
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 924 bits (466), Expect = 0.0 Identities = 556/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142083 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 142024 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 142023 ttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 141965 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141964 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 141905 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141904 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 141845 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 141844 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtact 141785 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 141784 gcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccga 141725 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141724 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 141665 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141664 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 141605 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||| || ||| || Sbjct: 141604 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttg 141549 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141548 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 141506 Score = 924 bits (466), Expect = 0.0 Identities = 556/583 (95%), Gaps = 5/583 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111574 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 111633 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 111634 ttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 111692 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111693 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 111752 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111753 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 111812 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 111813 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtact 111872 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 111873 gcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccga 111932 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111933 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 111992 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111993 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 112052 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||| || ||| || Sbjct: 112053 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttg 112108 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112109 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 112151
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 918 bits (463), Expect = 0.0 Identities = 473/475 (99%), Gaps = 1/475 (0%) Strand = Plus / Plus Query: 120 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 180 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 240 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 300 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 360 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 420 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 480 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 540 agggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 a-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 474
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 916 bits (462), Expect = 0.0 Identities = 554/583 (95%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134956 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 134897 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 134896 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 134838 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134837 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 134778 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134777 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 134718 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 134717 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgct 134658 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 134657 gcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccga 134598 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134597 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 134538 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134537 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 134478 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 134477 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg-----agaa 134426 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 134383 Score = 916 bits (462), Expect = 0.0 Identities = 554/583 (95%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105326 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 105385 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 105386 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 105444 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105445 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105504 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105505 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105564 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 105565 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgct 105624 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 105625 gcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccga 105684 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105685 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 105744 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105745 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 105804 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 105805 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg-----agaa 105856 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 105899
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 912 bits (460), Expect = 0.0 Identities = 554/583 (95%), Gaps = 7/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 136566 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 136507 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 136506 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 136448 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136447 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136388 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136387 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136328 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 136327 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 136268 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136267 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 136208 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136207 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 136148 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136147 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 136088 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 136087 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---g 136034 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136033 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 135991 Score = 912 bits (460), Expect = 0.0 Identities = 554/583 (95%), Gaps = 7/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105859 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 105918 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 105919 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 105977 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105978 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106037 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106038 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106097 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 106098 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 106157 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106158 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 106217 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106218 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 106277 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106278 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 106337 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 106338 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---g 106391 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106392 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106434
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 902 bits (455), Expect = 0.0 Identities = 553/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 132750 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 132691 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 132690 ttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctg 132632 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132631 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 132572 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132571 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 132512 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 132511 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 132452 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132451 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 132392 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132391 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 132332 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132331 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 132272 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 132271 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg 132215 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 132174 Score = 902 bits (455), Expect = 0.0 Identities = 553/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104128 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 104187 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 104188 ttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctg 104246 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104247 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 104306 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104307 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104366 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 104367 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 104426 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104427 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 104486 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104487 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104546 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104547 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 104606 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 104607 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg 104663 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 104704
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 902 bits (455), Expect = 0.0 Identities = 553/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 132973 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 132914 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 132913 ttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctg 132855 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132854 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 132795 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132794 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 132735 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 132734 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgcc 132675 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132674 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 132615 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132614 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 132555 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132554 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 132495 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 132494 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctg 132440 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132439 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 132397 Score = 902 bits (455), Expect = 0.0 Identities = 553/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 103791 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 103850 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 103851 ttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctg 103909 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103910 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 103969 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103970 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104029 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 104030 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgcc 104089 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104090 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 104149 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104150 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104209 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104210 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 104269 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 104270 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctg 104324 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104325 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 104367
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 902 bits (455), Expect = 0.0 Identities = 553/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 132743 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 132684 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 132683 ttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctg 132625 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132624 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 132565 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132564 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 132505 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 132504 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 132445 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132444 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 132385 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 132325 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132324 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 132265 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 132264 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg 132208 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 132167 Score = 902 bits (455), Expect = 0.0 Identities = 553/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104126 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 104185 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 104186 ttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctg 104244 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104245 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 104304 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104305 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104364 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 104365 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 104424 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104425 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 104484 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104485 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104544 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104545 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 104604 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 104605 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg 104661 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 104702
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 894 bits (451), Expect = 0.0 Identities = 552/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131642 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 131583 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 131582 ttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctg 131524 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131523 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 131464 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131463 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 131404 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 131403 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 131344 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131343 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 131284 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131283 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 131224 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131223 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 131164 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 131163 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg 131107 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 131066 Score = 894 bits (451), Expect = 0.0 Identities = 552/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102993 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 103052 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 103053 ttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctg 103111 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103112 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 103171 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103172 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 103231 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 103232 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 103291 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 103292 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 103351 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103352 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 103411 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103412 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 103471 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 103472 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg 103528 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 103569
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 894 bits (451), Expect = 0.0 Identities = 552/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 133934 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 133875 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 133874 ttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctg 133816 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133815 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 133756 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133755 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 133696 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||| Sbjct: 133695 aaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgcc 133636 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133635 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 133576 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133575 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 133516 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133515 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 133456 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 133455 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctg 133401 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133400 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 133358 Score = 894 bits (451), Expect = 0.0 Identities = 552/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104715 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 104774 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 104775 ttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctg 104833 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104834 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 104893 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104894 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104953 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||| Sbjct: 104954 aaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgcc 105013 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105014 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 105073 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105074 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 105133 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105134 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 105193 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 105194 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctg 105248 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105249 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 105291
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 886 bits (447), Expect = 0.0 Identities = 551/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 140335 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 140276 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 140275 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 140217 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140216 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 140157 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140156 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 140097 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 140096 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgct 140037 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 140036 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 139977 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139976 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 139917 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139916 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 139857 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | | | Sbjct: 139856 ggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag--acggg 139802 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139801 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 139759 Score = 886 bits (447), Expect = 0.0 Identities = 551/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 109725 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 109784 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 109785 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 109843 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109844 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 109903 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109904 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 109963 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 109964 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgct 110023 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110024 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 110083 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110084 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 110143 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110144 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 110203 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | | | Sbjct: 110204 ggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag--acggg 110258 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110259 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 110301
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 886 bits (447), Expect = 0.0 Identities = 551/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 24 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 83 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 84 ttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctg 142 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||| Sbjct: 263 aaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgcc 322 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 323 gcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacccga 382 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 502 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 503 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctg 557 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 600
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 886 bits (447), Expect = 0.0 Identities = 551/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 93 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgct 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 511 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 512 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg 568 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 609
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 870 bits (439), Expect = 0.0 Identities = 549/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106030 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 106089 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 106090 ttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 106148 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106149 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106208 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106209 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106268 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 106269 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgtt 106328 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106329 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 106388 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106389 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 106448 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 106449 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 106508 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 106509 ggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgag 106563 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106564 gactctgaccgcgtgcctgttgaagaatgagccggcgactcat 106606 Score = 821 bits (414), Expect = 0.0 Identities = 548/586 (93%), Gaps = 9/586 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135879 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 135820 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 135819 ttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 135761 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135760 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135701 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135700 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135641 Query: 252 aaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 |||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 135640 aaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgt 135581 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgaccc 369 |||||||||||||| | |||||||||||||||||||||||||||||| | | ||||||| Sbjct: 135580 tgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctgaccc 135521 Query: 370 gagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggcta 428 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135520 gagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggcta 135461 Query: 429 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 488 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 135460 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 135401 Query: 489 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaa 548 | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 135400 atcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--ac 135346 Query: 549 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135345 gaggactctgaccgcgtgcctgttgaagaatgagccggcgactcat 135300
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 870 bits (439), Expect = 0.0 Identities = 549/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 136155 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 136096 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 136095 ttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 136037 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136036 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135977 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135976 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135917 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 135916 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgtt 135857 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135856 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 135797 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 135737 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 135736 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 135677 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 135676 ggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgag 135622 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135621 gactctgaccgcgtgcctgttgaagaatgagccggcgactcat 135579 Score = 870 bits (439), Expect = 0.0 Identities = 549/583 (94%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106252 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 106311 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 106312 ttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 106370 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106371 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106430 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106431 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106490 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 106491 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgtt 106550 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106551 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 106610 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106611 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 106670 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 106671 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 106730 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 106731 ggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgag 106785 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106786 gactctgaccgcgtgcctgttgaagaatgagccggcgactcat 106828
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 868 bits (438), Expect = 0.0 Identities = 552/586 (94%), Gaps = 7/586 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| |||||||||| || |||||||||||||||||||| Sbjct: 46277 ggatacctaggcacccagagacgaagaagggcgtattaatcgacgaaatgcttcggggag 46336 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 46337 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 46395 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 46396 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaa 46455 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 46456 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 46515 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct: 46516 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtacc 46575 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46576 gcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacccga 46635 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46636 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 46695 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 46696 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 46755 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gggaaagt 550 ||| ||||||||||||| |||||||| | ||||| |||||||||||||| || || Sbjct: 46756 ggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaggcgccgt 46812 Query: 551 g--atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46813 ggaagctctgaccgcgtgcctgttgaagaatgagccggcgactcat 46858
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 136275 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 136216 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 136215 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 136157 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136156 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136097 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136096 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136037 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 136036 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 135977 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135976 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 135917 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135916 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135857 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135856 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135797 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135796 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 135743 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135742 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 135699 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 106355 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 106414 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 106415 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 106473 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106533 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106534 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106593 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 106594 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 106653 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106654 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 106713 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106714 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106773 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106774 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106833 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106834 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106887 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106888 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106931
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 136913 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 136854 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 136853 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 136795 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136794 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136735 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136734 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136675 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 136674 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 136615 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136614 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 136555 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136554 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 136495 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136494 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 136435 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 136434 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 136381 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136380 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 136337 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 106644 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 106703 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 106704 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 106762 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106763 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106822 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106823 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106882 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 106883 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 106942 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106943 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 107002 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107003 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 107062 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107063 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 107122 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 107123 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 107176 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107177 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 107220
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1549 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 1608 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 1609 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 1667 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1668 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 1727 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1728 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 1787 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 1788 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 1847 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1848 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 1907 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1908 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 1967 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1968 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 2027 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 2028 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 2081 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2082 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 2125
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 135521 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 135462 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 135461 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 135403 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135402 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135343 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135342 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135283 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135282 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135223 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135222 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135163 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135162 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135103 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135102 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135043 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135042 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 134989 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134988 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 134945 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 105515 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 105574 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 105575 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 105633 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105634 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105693 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105694 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105753 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105754 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105813 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105814 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 105873 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105874 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 105933 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105934 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 105993 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 105994 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106047 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106091
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 135656 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 135597 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 135596 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 135538 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135537 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135478 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135477 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135418 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135417 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135358 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135357 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135298 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135297 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135238 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135237 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135178 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135177 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 135124 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135123 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 135080 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 105687 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 105746 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 105747 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 105805 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105806 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105865 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105866 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105925 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105926 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105985 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105986 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 106045 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106046 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106105 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106106 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106165 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106166 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106219 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106263
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 135654 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 135595 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 135594 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 135536 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135476 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135475 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135416 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135415 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135356 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135355 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135296 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135295 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135236 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135235 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135176 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135175 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 135122 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135121 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 135078 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 105684 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 105743 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 105744 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 105802 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105803 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105862 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105863 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105922 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105923 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105982 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105983 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 106042 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106043 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106102 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106103 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106162 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106163 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106216 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106217 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106260
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 135566 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 135507 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 135506 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 135448 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135447 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135388 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135387 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135328 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135327 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135268 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135267 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135208 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135207 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135148 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135147 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135088 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135087 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 135034 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135033 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 134990 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 105562 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 105621 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 105622 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 105680 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105681 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105740 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105741 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105800 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105801 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105860 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105861 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 105920 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105921 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 105980 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105981 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106040 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106041 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106094 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106095 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106138
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 136273 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 136214 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 136213 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 136155 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136154 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136095 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136094 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136035 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 136034 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 135975 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135974 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 135915 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135914 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135855 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135854 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135795 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135794 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 135741 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135740 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 135697 Score = 866 bits (437), Expect = 0.0 Identities = 550/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 106353 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 106412 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 106413 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 106471 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106472 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106531 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106532 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106591 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 106592 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 106651 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106652 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 106711 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106712 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106771 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106772 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106831 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106832 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106885 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106886 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106929
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 864 bits (436), Expect = 0.0 Identities = 550/584 (94%), Gaps = 7/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 25 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 84 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 85 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 143 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 144 aatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaa 203 Query: 192 agaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtg 263 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 264 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgc 323 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 || |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 324 cgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctgacccg 383 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 443 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 444 tactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccac 503 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 504 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctggg 560 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 g--ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 602
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 862 bits (435), Expect = 0.0 Identities = 548/583 (93%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 139479 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 139420 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 139419 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 139361 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 139360 aatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaa 139301 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139300 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 139241 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 139240 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgcc 139181 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139180 gaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 139121 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139120 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 139061 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139060 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtc 139001 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 139000 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg 138944 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 138903 Score = 862 bits (435), Expect = 0.0 Identities = 548/583 (93%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 109618 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 109677 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 109678 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 109736 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 109737 aatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaa 109796 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109797 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 109856 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 109857 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgcc 109916 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 109917 gaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 109976 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109977 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 110036 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110037 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtc 110096 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 110097 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg 110153 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 110194
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 862 bits (435), Expect = 0.0 Identities = 546/580 (94%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 26 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| ||||| Sbjct: 86 ctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-tgctg 144 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 204 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 205 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 264 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| || Sbjct: 265 aaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtccc 324 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 325 gcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccga 384 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 444 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 504 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||||||| |||||||||||||||||||| | | | | Sbjct: 505 ggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcg-g 560 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 860 bits (434), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 135533 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 135474 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 135473 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 135415 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135414 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135355 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135354 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135295 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135294 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135235 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135234 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135175 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135174 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135115 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135114 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135055 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135054 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 135001 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | |||||||||||||||||||||||||||||||||||||| Sbjct: 135000 gggctctgaccgcgtgcctgttgaagaatgagccggcgact 134960 Score = 860 bits (434), Expect = 0.0 Identities = 547/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 105529 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 105588 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 105589 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 105647 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105648 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105707 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105708 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105767 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105768 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105827 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105828 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 105887 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105888 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 105947 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105948 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106007 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106008 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106061 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | |||||||||||||||||||||||||||||||||||||| Sbjct: 106062 gggctctgaccgcgtgcctgttgaagaatgagccggcgact 106102
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 858 bits (433), Expect = 0.0 Identities = 549/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 136004 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 135945 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||| Sbjct: 135944 ttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctg 135886 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135885 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135826 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135825 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135766 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 135765 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 135706 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135705 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 135646 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135645 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135586 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135585 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135526 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135525 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 135472 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135471 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 135428 Score = 858 bits (433), Expect = 0.0 Identities = 549/584 (94%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 106134 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 106193 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||| Sbjct: 106194 ttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctg 106252 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106253 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106312 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106313 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106372 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 106373 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 106432 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106433 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 106492 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106493 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106552 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106553 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106612 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106613 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 106666 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106667 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 106710
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 852 bits (430), Expect = 0.0 Identities = 548/583 (93%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 131766 ggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggag 131707 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||| Sbjct: 131706 ttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctg 131648 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131647 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 131588 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131587 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 131528 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 131527 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcg 131468 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131467 gaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 131408 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131407 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 131348 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131347 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 131288 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | ||||| ||||||||||||||||| | | Sbjct: 131287 ggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg-accag 131232 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 131231 a-ccctgaccgcgtgcctgttgaagaatgagccggcgactcat 131190 Score = 852 bits (430), Expect = 0.0 Identities = 548/583 (93%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 101679 ggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggag 101738 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||| Sbjct: 101739 ttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctg 101797 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101798 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 101857 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101858 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 101917 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 101918 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcg 101977 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101978 gaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 102037 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102038 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 102097 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 102098 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 102157 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | ||||| ||||||||||||||||| | | Sbjct: 102158 ggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg-accag 102213 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 102214 a-ccctgaccgcgtgcctgttgaagaatgagccggcgactcat 102255
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 852 bits (430), Expect = 0.0 Identities = 507/531 (95%), Gaps = 4/531 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 130510 ggatacctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggggag 130451 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||| Sbjct: 130450 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctg 130392 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130391 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 130332 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130331 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 130272 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| Sbjct: 130271 aaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgcc 130212 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130211 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 130152 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130151 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 130092 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 130091 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 130032 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130031 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 852 bits (430), Expect = 0.0 Identities = 507/531 (95%), Gaps = 4/531 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 101946 ggatacctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggggag 102005 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||| Sbjct: 102006 ttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctg 102064 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102065 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 102124 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102125 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 102184 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| Sbjct: 102185 aaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgcc 102244 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102245 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 102304 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102305 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 102364 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 102365 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 102424 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102425 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 129929 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 102527
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 848 bits (428), Expect = 0.0 Identities = 549/585 (93%), Gaps = 6/585 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 139688 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 139629 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 139628 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 139570 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139569 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 139510 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139509 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 139450 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 139449 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgc 139390 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139389 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 139330 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139329 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 139270 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139269 tactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 139210 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 139209 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactact 139153 Query: 551 -gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139152 aggactctgaccgcgtgcctgttgaagaatgagccggcgactcat 139108 Score = 848 bits (428), Expect = 0.0 Identities = 549/585 (93%), Gaps = 6/585 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 109611 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 109670 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 109671 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 109729 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109730 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 109789 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109790 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 109849 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 310 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 109850 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgc 109909 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 109910 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 109969 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109970 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 110029 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110030 tactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 110089 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 110090 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactact 110146 Query: 551 -gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110147 aggactctgaccgcgtgcctgttgaagaatgagccggcgactcat 110191
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 844 bits (426), Expect = 0.0 Identities = 506/531 (95%), Gaps = 4/531 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 93 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatc 511 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 512 ggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 844 bits (426), Expect = 0.0 Identities = 506/531 (95%), Gaps = 4/531 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 93 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatc 511 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 512 cgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||| ||||||||||||||||||| | |||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcat 621
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 841 bits (424), Expect = 0.0 Identities = 547/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 13 gatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 72 ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1 gatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagt 60 Query: 73 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 132 ||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||| Sbjct: 61 tgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctga 119 Query: 133 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 192 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 179 Query: 193 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 239 Query: 253 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgcc 311 |||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 240 aacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgct 299 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| | ||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 300 gcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 358 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 478 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 479 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---g 532 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 575
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 837 bits (422), Expect = 0.0 Identities = 505/531 (95%), Gaps = 4/531 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 93 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 512 cgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatga 581 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 837 bits (422), Expect = 0.0 Identities = 505/531 (95%), Gaps = 4/531 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 93 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 512 ggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||| |||||||||||| || |||||||| ||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcat 620
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 837 bits (422), Expect = 0.0 Identities = 505/531 (95%), Gaps = 4/531 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcgggggg 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 93 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 512 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||| ||||||||||||||| |||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcat 620
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 831 bits (419), Expect = 0.0 Identities = 534/570 (93%), Gaps = 6/570 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 74 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 133 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 134 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctg 192 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 193 aatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaa 252 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 312 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 313 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgcc 372 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 373 gaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 432 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 492 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 493 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtc 552 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | || | Sbjct: 553 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg 609 Query: 552 atctctgaccgcgtgcctgttgaagaatga 581 |||||||||||||||||||||||||||| Sbjct: 610 --ctctgaccgcgtgcctgttgaagaatga 637
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 75 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 134 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 135 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 195 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 255 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 315 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 374 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 375 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 435 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 495 tagtga 500 |||||| Sbjct: 421 tagtga 426
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 817 bits (412), Expect = 0.0 Identities = 542/583 (92%), Gaps = 7/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4256 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 4315 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| Sbjct: 4316 ttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctg 4374 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4375 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 4434 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4435 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 4494 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||| ||||||||||||| | || || Sbjct: 4495 aaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgtt 4554 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4555 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 4614 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4615 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4674 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4675 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtc 4734 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||||||| |||||||||||||||||| ||| | Sbjct: 4735 ggggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga---ggagctgg 4788 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4789 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 4831
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 817 bits (412), Expect = 0.0 Identities = 543/583 (93%), Gaps = 8/583 (1%) Strand = Plus / Minus Query: 13 gatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 72 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagt 142794 Query: 73 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 132 ||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||| Sbjct: 142793 tgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctga 142735 Query: 133 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 192 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142734 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 142675 Query: 193 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142674 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 142615 Query: 253 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgcc 311 |||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 142614 aacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgct 142555 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 142554 gcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccga 142495 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142494 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 142435 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142434 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 142375 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | | | Sbjct: 142374 ggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca---g 142321 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142320 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 142278 Score = 817 bits (412), Expect = 0.0 Identities = 543/583 (93%), Gaps = 8/583 (1%) Strand = Plus / Plus Query: 13 gatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 72 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagt 110534 Query: 73 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 132 ||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||| Sbjct: 110535 tgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctga 110593 Query: 133 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 192 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110594 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 110653 Query: 193 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110654 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 110713 Query: 253 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgcc 311 |||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 110714 aacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgct 110773 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110774 gcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccga 110833 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110834 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 110893 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110894 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 110953 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | | | Sbjct: 110954 ggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca---g 111007 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111008 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 111050
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 817 bits (412), Expect = 0.0 Identities = 544/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| Sbjct: 86287 ggatacctaggcacccagagacgaggaagggcgtggtaagcgacgaaatgcttcggggag 86346 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| ||||| Sbjct: 86347 ttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc-tgctg 86405 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86406 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaat 86465 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 86466 agaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtga 86525 Query: 252 aaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtg 309 |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 86526 aaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtc 86585 Query: 310 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 369 | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||| Sbjct: 86586 ctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaaccc 86645 Query: 370 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86646 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 86705 Query: 430 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86706 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 86765 Query: 490 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 549 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| Sbjct: 86766 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--ggaaaat 86820 Query: 550 t-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86821 tagatctctgaccgcgtgcctgttgaagaatgagccggcgact 86863
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 817 bits (412), Expect = 0.0 Identities = 542/583 (92%), Gaps = 7/583 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 23669 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 23610 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| Sbjct: 23609 ttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctg 23551 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23550 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 23491 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 23490 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 23431 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||| ||||||||||||| | || || Sbjct: 23430 aaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgtt 23371 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23370 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 23311 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23310 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 23251 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23250 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtc 23191 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||||||| |||||||||||||||||| ||| | Sbjct: 23190 ggggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga---ggagctgg 23137 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23136 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 23094
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 817 bits (412), Expect = 0.0 Identities = 544/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| Sbjct: 88373 ggatacctaggcacccagagacgaggaagggcgtggtaagcgacgaaatgcttcggggag 88432 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| ||||| Sbjct: 88433 ttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc-tgctg 88491 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 88492 aatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaat 88551 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88552 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 88611 Query: 252 aaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtg 309 ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| Sbjct: 88612 aaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtc 88671 Query: 310 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 369 | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||| Sbjct: 88672 ctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaaccc 88731 Query: 370 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88732 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88791 Query: 430 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88792 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 88851 Query: 490 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 549 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| Sbjct: 88852 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--ggaaaat 88906 Query: 550 t-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88907 tagatctctgaccgcgtgcctgttgaagaatgagccggcgact 88949
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 813 bits (410), Expect = 0.0 Identities = 546/586 (93%), Gaps = 8/586 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131846 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 131787 Query: 72 ttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgct 130 |||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||| Sbjct: 131786 ttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgct 131728 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131727 gaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaa 131668 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131667 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 131608 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--t 308 ||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| | Sbjct: 131607 aaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaat 131548 Query: 309 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 368 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 131547 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 131488 Query: 369 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131487 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 131428 Query: 429 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 488 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 131427 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 131368 Query: 489 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaa 548 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 131367 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctc 131311 Query: 549 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131310 ggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 131266 Score = 813 bits (410), Expect = 0.0 Identities = 546/586 (93%), Gaps = 8/586 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 103548 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 103607 Query: 72 ttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgct 130 |||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||| Sbjct: 103608 ttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgct 103666 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103667 gaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaa 103726 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103727 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 103786 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--t 308 ||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| | Sbjct: 103787 aaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaat 103846 Query: 309 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 368 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 103847 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 103906 Query: 369 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103907 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 103966 Query: 429 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 488 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 103967 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 104026 Query: 489 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaa 548 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 104027 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctc 104083 Query: 549 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104084 ggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 104128
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 807 bits (407), Expect = 0.0 Identities = 547/586 (93%), Gaps = 11/586 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || | |||||||||||||||||| Sbjct: 1792 ggatacctaggcacccagagacgaggaagggcgtagtaatc-acgaaatgcttcggggag 1850 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 1851 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 1909 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1910 aatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaa 1969 Query: 192 agaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1970 agaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 2029 Query: 251 aaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggttgagt 308 |||||||||||||||||||||||||||||| | ||||||||||||||||| | || | Sbjct: 2030 aaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaat 2089 Query: 309 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 368 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2090 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacc 2149 Query: 369 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2150 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 2209 Query: 429 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 488 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2210 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 2269 Query: 489 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaa 548 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 2270 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca- 2325 Query: 549 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2326 --gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 2369
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 805 bits (406), Expect = 0.0 Identities = 542/584 (92%), Gaps = 9/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 521 ggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggag 580 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| |||||||||||||||| |||||| |||||||| |||| | ||||| Sbjct: 581 ttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctg 639 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 699 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 759 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 760 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcg 819 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 820 gtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 879 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 939 Query: 432 actcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 940 actcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccat 999 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | ||||| |||||||||||||| | | | Sbjct: 1000 cggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacagg- 1055 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ---ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 1096
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 799 bits (403), Expect = 0.0 Identities = 546/585 (93%), Gaps = 13/585 (2%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| Sbjct: 125 ggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggag 184 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 185 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 243 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaa 190 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 244 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaa 303 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 363 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtg 309 |||||||| ||||||||||||||||||||||| |||||||||||||||| || || || Sbjct: 364 aaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatg 422 Query: 310 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 369 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 ctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgaccc 482 Query: 370 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 429 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 483 gagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaa 542 Query: 430 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 489 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 543 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc-a 601 Query: 490 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 549 ||| ||||||||||||| ||||||||| ||||||||||||||||||| | || Sbjct: 602 tcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggag---gccag 655 Query: 550 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 698
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 795 bits (401), Expect = 0.0 Identities = 539/583 (92%), Gaps = 8/583 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggag 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| |||||||||||||||| |||||| |||||||| |||| | ||||| Sbjct: 93 ttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcg 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| | | | Sbjct: 512 ggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacagg-- 566 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||| ||||||||||||||| |||||||||||||||||| Sbjct: 567 --ctctgaacgcgtgcctgttgaaaaatgagccggcgactcat 607
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 793 bits (400), Expect = 0.0 Identities = 481/507 (94%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4525 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 4584 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| Sbjct: 4585 ttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctg 4643 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4644 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 4703 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4704 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 4763 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 4764 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgtt 4823 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4824 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 4883 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4884 gtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4943 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 4944 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggc 5003 Query: 492 gggtagtgaaatagaacgtgaaaccgt 518 ||| ||||||||||||| ||||||||| Sbjct: 5004 ggggagtgaaatagaacatgaaaccgt 5030 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 5099
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 793 bits (400), Expect = 0.0 Identities = 481/507 (94%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4525 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 4584 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| Sbjct: 4585 ttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctg 4643 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4644 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 4703 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4704 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 4763 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 4764 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgtt 4823 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4824 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 4883 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4884 gtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4943 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 4944 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggc 5003 Query: 492 gggtagtgaaatagaacgtgaaaccgt 518 ||| ||||||||||||| ||||||||| Sbjct: 5004 ggggagtgaaatagaacatgaaaccgt 5030 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 5099
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 779 bits (393), Expect = 0.0 Identities = 539/584 (92%), Gaps = 8/584 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||| Sbjct: 52661 ggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggggag 52602 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||| Sbjct: 52601 ttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctg 52543 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52542 aatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaa 52483 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 52482 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcga 52423 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgc 310 |||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| Sbjct: 52422 aaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgc 52363 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 52362 tgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccg 52303 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52302 agtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 52243 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 52242 tactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccat 52183 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 52182 tggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 52129 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 52128 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 52085 Score = 779 bits (393), Expect = 0.0 Identities = 539/584 (92%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||| Sbjct: 37167 ggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggggag 37226 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||| Sbjct: 37227 ttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctg 37285 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 37286 aatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaa 37345 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 37346 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcga 37405 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgc 310 |||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| Sbjct: 37406 aaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgc 37465 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 37466 tgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccg 37525 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37526 agtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 37585 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 37586 tactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccat 37645 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 37646 tggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 37699 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 37700 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 37743
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 779 bits (393), Expect = 0.0 Identities = 538/581 (92%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 116184 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 116125 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 116124 ctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctg 116066 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116065 aattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 116006 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 116005 agaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 115946 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | Sbjct: 115945 aaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcct 115887 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||| Sbjct: 115886 gcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccga 115827 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115826 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 115767 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115766 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 115707 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || || Sbjct: 115706 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--aattg 115652 Query: 552 -atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 115651 aatctctgaccgcgtgcctgttgaagaatgagccggcgact 115611 Score = 779 bits (393), Expect = 0.0 Identities = 538/581 (92%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 85936 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 85995 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||| Sbjct: 85996 ctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctg 86054 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86055 aattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 86114 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86115 agaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 86174 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | Sbjct: 86175 aaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcct 86233 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||| Sbjct: 86234 gcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccga 86293 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86294 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 86353 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86354 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 86413 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || || Sbjct: 86414 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--aattg 86468 Query: 552 -atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 86469 aatctctgaccgcgtgcctgttgaagaatgagccggcgact 86509
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 779 bits (393), Expect = 0.0 Identities = 539/584 (92%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||| Sbjct: 4095 ggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggggag 4154 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||| Sbjct: 4155 ttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctg 4213 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4214 aatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaa 4273 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 4274 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcga 4333 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgc 310 |||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| Sbjct: 4334 aaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgc 4393 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 4394 tgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccg 4453 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4454 agtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 4513 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 4514 tactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccat 4573 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 4574 tggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca--- 4627 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4628 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 4671
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 773 bits (390), Expect = 0.0 Identities = 400/402 (99%), Gaps = 1/402 (0%) Strand = Plus / Plus Query: 193 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 253 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 313 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 372 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 373 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 433 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 493 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtga 552 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtga 359 Query: 553 tctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctctgaccgcgtgcctgttgaagaatgagccggcgactcat 401
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 771 bits (389), Expect = 0.0 Identities = 541/589 (91%), Gaps = 11/589 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 128421 ggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcggggag 128362 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 128361 ctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 128303 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128302 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 128243 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 128242 ggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtga 128183 Query: 252 aaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttg 305 ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 128182 aaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttg 128123 Query: 306 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 365 ||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| Sbjct: 128122 agtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctcta 128063 Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128062 acccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 128003 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 128002 ctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacc 127943 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| | Sbjct: 127942 cccataggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaga 127886 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 127885 attg-gatctctgaccgcatgcctgttgaggaatgagccggcgactcat 127838 Score = 771 bits (389), Expect = 0.0 Identities = 541/589 (91%), Gaps = 11/589 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 95026 ggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcggggag 95085 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 95086 ctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 95144 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95145 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95204 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 95205 ggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtga 95264 Query: 252 aaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttg 305 ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 95265 aaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttg 95324 Query: 306 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 365 ||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| Sbjct: 95325 agtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctcta 95384 Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 acccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95444 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 95445 ctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacc 95504 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| | Sbjct: 95505 cccataggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaga 95561 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 95562 attg-gatctctgaccgcatgcctgttgaggaatgagccggcgactcat 95609
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 769 bits (388), Expect = 0.0 Identities = 536/581 (92%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2069 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 2128 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 2129 ctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 2187 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2188 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 2247 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 2248 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtga 2307 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | Sbjct: 2308 aaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcct 2367 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccg 370 ||||||||||||| | |||||||||||||||||||| || | || ||||||| ||||| Sbjct: 2368 gcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccg 2427 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2428 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 2487 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2488 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 2547 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| Sbjct: 2548 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcg 2603 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2604 aatctctgaccgcgtgcctgttgaagaatgagccggcgact 2644
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 769 bits (388), Expect = 0.0 Identities = 398/400 (99%), Gaps = 1/400 (0%) Strand = Plus / Plus Query: 195 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 255 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 315 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 374 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 375 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 435 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 495 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 554 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 555 tctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcat 399
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 769 bits (388), Expect = 0.0 Identities = 398/400 (99%), Gaps = 1/400 (0%) Strand = Plus / Plus Query: 195 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 255 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 315 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 374 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 375 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 435 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 495 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 554 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 555 tctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcat 399
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 769 bits (388), Expect = 0.0 Identities = 536/581 (92%), Gaps = 6/581 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118124 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 118065 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 118064 ctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 118006 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118005 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 117946 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 117945 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtga 117886 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | Sbjct: 117885 aaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcct 117826 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccg 370 ||||||||||||| | |||||||||||||||||||| || | || ||||||| ||||| Sbjct: 117825 gcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccg 117766 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117765 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 117706 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117705 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 117646 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| Sbjct: 117645 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcg 117590 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 117589 aatctctgaccgcgtgcctgttgaagaatgagccggcgact 117549 Score = 769 bits (388), Expect = 0.0 Identities = 536/581 (92%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 89978 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 90037 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 90038 ctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 90096 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90097 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 90156 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 90157 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtga 90216 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | Sbjct: 90217 aaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcct 90276 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccg 370 ||||||||||||| | |||||||||||||||||||| || | || ||||||| ||||| Sbjct: 90277 gcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccg 90336 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 90337 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 90396 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 90397 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 90456 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| Sbjct: 90457 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcg 90512 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 90513 aatctctgaccgcgtgcctgttgaagaatgagccggcgact 90553
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 767 bits (387), Expect = 0.0 Identities = 534/580 (92%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 26 ggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 86 ctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-tgctg 144 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 aattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 204 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 205 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtga 264 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||| |||||| | |||||||| |||||||||||| ||||| | | Sbjct: 265 aaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcct 324 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 325 gcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccga 384 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 385 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 444 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccata 504 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| | |||||||||||||||||| || ||| Sbjct: 505 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcga 560 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 767 bits (387), Expect = 0.0 Identities = 397/399 (99%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 256 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 316 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 375 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 376 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 436 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 496 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 555 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 359 Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 398
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 767 bits (387), Expect = 0.0 Identities = 397/399 (99%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 256 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 316 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 375 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 376 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 436 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 496 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 555 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 362 Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 401
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 765 bits (386), Expect = 0.0 Identities = 497/531 (93%), Gaps = 5/531 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 33 ggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggggag 92 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| |||||||||||||||| |||||| |||||||| |||| | ||||| Sbjct: 93 ttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctg 151 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 211 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcg 331 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 452 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatc 510 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| Sbjct: 511 ggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggagg 558
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 763 bits (385), Expect = 0.0 Identities = 395/397 (99%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 198 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 258 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 318 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 377 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 378 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 438 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 498 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctct 557 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctct 359 Query: 558 gaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgcgtgcctgttgaagaatgagccggcgactcat 396
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 759 bits (383), Expect = 0.0 Identities = 456/477 (95%), Gaps = 4/477 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 81 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 82 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 140 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 200 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 260 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 261 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatact 320 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 321 gcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 380 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 440 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 488 ||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 441 actac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 759 bits (383), Expect = 0.0 Identities = 533/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3915 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 3974 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 3975 ctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 4033 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4034 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 4093 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4094 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 4153 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 4154 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 4213 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 4214 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 4273 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4274 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4333 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4334 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 4393 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||| || | |||| |||||||||| || || ||| | Sbjct: 4394 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcgg 4449 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 4450 atctctgaccgcgtgcctgttgaagaatgagccggcgact 4489
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 759 bits (383), Expect = 0.0 Identities = 533/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||| Sbjct: 69 ctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-tgctg 127 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 128 aatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaag 187 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 188 agaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtga 247 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | Sbjct: 248 aaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcct 307 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| |||||| Sbjct: 308 gcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccga 367 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 487 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||||||| |||| ||||||||||||||| | | | | Sbjct: 488 ggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggaggagaatcg-g 543 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 544 atctctgaccgcgtgcctgttgaagaatgagccggcgact 583
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 759 bits (383), Expect = 0.0 Identities = 533/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 84 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 85 ctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 143 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 203 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 263 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 264 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 323 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 324 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 383 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 443 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 503 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||| || | |||| |||||||||| || || ||| | Sbjct: 504 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcgg 559 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 759 bits (383), Expect = 0.0 Identities = 533/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 151220 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 151161 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 151160 ctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 151102 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151101 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 151042 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 151041 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 150982 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 150981 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 150922 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 150921 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 150862 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150861 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 150802 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150801 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 150742 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||| || | |||| |||||||||| || || ||| | Sbjct: 150741 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcgg 150686 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 150685 atctctgaccgcgtgcctgttgaagaatgagccggcgact 150646 Score = 759 bits (383), Expect = 0.0 Identities = 533/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117446 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 117505 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 117506 ctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 117564 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117565 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 117624 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 117625 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 117684 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 117685 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 117744 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 117745 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 117804 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117805 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 117864 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117865 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 117924 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||| || | |||| |||||||||| || || ||| | Sbjct: 117925 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcgg 117980 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 117981 atctctgaccgcgtgcctgttgaagaatgagccggcgact 118020
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 759 bits (383), Expect = 0.0 Identities = 533/580 (91%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 84 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||| Sbjct: 85 ctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctg 143 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 203 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 263 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 264 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 323 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 324 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 383 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 443 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 503 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| ||||| || | |||| |||||||||| || || ||| | Sbjct: 504 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcgg 559 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 757 bits (382), Expect = 0.0 Identities = 536/584 (91%), Gaps = 9/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 26 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| ||||| Sbjct: 86 ctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc-tgctg 144 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 145 aattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaa 204 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 205 agaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtga 264 Query: 252 aaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgag 307 ||||||||||||||| |||| |||||| || ||| ||||||||||||||| |||||| Sbjct: 265 aaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgag 324 Query: 308 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 367 | | |||||| |||||| | ||||||||| |||||||||| || | |||||||||| || Sbjct: 325 tcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaac 384 Query: 368 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 444 Query: 428 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 504 Query: 488 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaa 547 || ||| ||||||||||||| ||||||||| |||||||||||||||||||| | | Sbjct: 505 catcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaat 561 Query: 548 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 cg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 604
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 753 bits (380), Expect = 0.0 Identities = 446/467 (95%), Gaps = 1/467 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 61 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| | Sbjct: 62 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgccg 120 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 121 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 180 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 240 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || || Sbjct: 241 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacacc 300 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 301 gcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccga 360 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 420 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 478 |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 421 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 747 bits (377), Expect = 0.0 Identities = 541/584 (92%), Gaps = 19/584 (3%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 708 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 649 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||| ||||||||||||||||| ||||||||| ||| |||| |||||| Sbjct: 648 ttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ctgctg 595 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||||| || |||| ||| |||||||||||||||||||||| Sbjct: 594 aatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagaggaaa 542 Query: 192 agaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 agaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 482 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 ||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| Sbjct: 481 aaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgc 422 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 421 tgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccg 362 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 302 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 301 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 242 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 241 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccggg 185 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 g--ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 143
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 745 bits (376), Expect = 0.0 Identities = 533/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146534 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 146475 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | ||||| Sbjct: 146474 ctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctg 146416 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146415 aattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaag 146356 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 146355 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 146296 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | Sbjct: 146295 aaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcct 146236 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccg 370 | ||||||||||| | |||||||||||||||||||||||| || |||||||| ||||| Sbjct: 146235 gtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccg 146176 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 146175 agtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 146116 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 146115 tactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgt 146056 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | ||||||||||||||||| || ||| Sbjct: 146055 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggagaatcg 146000 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||| |||||||||||||||||||||||||||||||||||| Sbjct: 145999 gatccctgaccgcgtgcctgttgaagaatgagccggcgact 145959 Score = 745 bits (376), Expect = 0.0 Identities = 533/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111928 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 111987 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | ||||| Sbjct: 111988 ctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctg 112046 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112047 aattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaag 112106 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112107 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 112166 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | Sbjct: 112167 aaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcct 112226 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccg 370 | ||||||||||| | |||||||||||||||||||||||| || |||||||| ||||| Sbjct: 112227 gtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccg 112286 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112287 agtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 112346 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112347 tactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgt 112406 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | ||||||||||||||||| || ||| Sbjct: 112407 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggagaatcg 112462 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||| |||||||||||||||||||||||||||||||||||| Sbjct: 112463 gatccctgaccgcgtgcctgttgaagaatgagccggcgact 112503
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 724 bits (365), Expect = 0.0 Identities = 473/505 (93%), Gaps = 8/505 (1%) Strand = Plus / Minus Query: 91 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 150 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 151 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 211 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 271 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 329 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 330 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 390 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 449 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 450 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 509 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 510 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcct 569 |||||||| | |||||||||||||||||||| | | | |||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcct 40 Query: 570 gttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||| Sbjct: 39 gttgaagaatgagccggcgactcat 15
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 710 bits (358), Expect = 0.0 Identities = 444/470 (94%), Gaps = 7/470 (1%) Strand = Plus / Plus Query: 126 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 185 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 186 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 246 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 304 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 305 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 364 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 365 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 425 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 484 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 485 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 544 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 545 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 cca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 480
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 84 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 143 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 144 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 204 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 264 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 324 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 383 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 384 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 444 ccgata 449 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 704 bits (355), Expect = 0.0 Identities = 375/382 (98%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 123445 ggatacctaggtacccagagatgaggaagggcgtagcaagcgacgaaatgcttcggggag 123386 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123385 ttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 123326 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123325 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 123266 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123265 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 123206 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123205 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 123146 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 123145 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccga 123086 Query: 372 gtagcatggggcacgtggaatc 393 |||||||||||||||||||||| Sbjct: 123085 gtagcatggggcacgtggaatc 123064 Score = 392 bits (198), Expect = e-106 Identities = 208/210 (99%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 385 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 445 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 505 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 564 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcg 122642 Query: 565 tgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||| ||||||| Sbjct: 122641 tgcctgttgaagaatgagccggtgactcat 122612
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 704 bits (355), Expect = 0.0 Identities = 375/382 (98%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 12825986 ggatacctaggtacccagagatgaggaagggcgtagcaagcgacgaaatgcttcggggag 12825927 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 12825926 ttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 12825867 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825866 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 12825807 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825806 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 12825747 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825746 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 12825687 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 12825686 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccga 12825627 Query: 372 gtagcatggggcacgtggaatc 393 |||||||||||||||||||||| Sbjct: 12825626 gtagcatggggcacgtggaatc 12825605 Score = 392 bits (198), Expect = e-106 Identities = 208/210 (99%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 385 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 445 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 505 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 564 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcg 12825183 Query: 565 tgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||| ||||||| Sbjct: 12825182 tgcctgttgaagaatgagccggtgactcat 12825153 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 330 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 389 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 668 bits (337), Expect = 0.0 Identities = 526/584 (90%), Gaps = 9/584 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| |||||||||||| |||| || |||||||||||||||||||| Sbjct: 25 ggatacctaggcacccagagacgaggaagggtgtagtaatcgacgaaatgcttcggggag 84 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| |||| Sbjct: 85 ttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-tgctc 143 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 aatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 203 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || Sbjct: 204 ataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcga 263 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 |||||||||||||||||||||||| |||||| ||||||||||||||||| | || | || Sbjct: 264 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatga 323 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 |||||||||||||| |||||||||||| | |||||||||||| || ||||||||||| Sbjct: 324 tgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccg 383 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 agtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 443 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 444 tactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccat 502 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 503 tggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagcca--- 556 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcat 600
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 652 bits (329), Expect = 0.0 Identities = 375/390 (96%), Gaps = 14/390 (3%) Strand = Plus / Minus Query: 210 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 270 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 330 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 389 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 390 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 444 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 445 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 505 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 564 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 75128 Query: 565 tgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||| Sbjct: 75127 tgcctgttgaagaatgagccggcgactcat 75098 Score = 389 bits (196), Expect = e-105 Identities = 201/203 (99%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 75687 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 75628 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 75627 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 75568 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75567 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 75508 Query: 192 agaaagcaaaagcgattcccgta 214 ||||||||||||||||||||||| Sbjct: 75507 agaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 141 gcaggcaagagacaacctggcgaactgaaacatcttagta 180 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 652 bits (329), Expect = 0.0 Identities = 375/390 (96%), Gaps = 14/390 (3%) Strand = Plus / Plus Query: 210 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 270 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 330 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 389 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 390 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 444 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 445 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 505 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 564 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 382410 Query: 565 tgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||| Sbjct: 382411 tgcctgttgaagaatgagccggcgactcat 382440 Score = 389 bits (196), Expect = e-105 Identities = 201/203 (99%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 381851 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 381910 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 381911 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 381970 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381971 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 382030 Query: 192 agaaagcaaaagcgattcccgta 214 ||||||||||||||||||||||| Sbjct: 382031 agaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 141 gcaggcaagagacaacctggcgaactgaaacatcttagta 180 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 141 gcaggcaagagacaacctggcgaactgaaacatcttagta 180 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 652 bits (329), Expect = 0.0 Identities = 375/390 (96%), Gaps = 14/390 (3%) Strand = Plus / Minus Query: 210 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 270 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 330 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 389 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 390 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 444 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 445 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 505 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 564 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 113219 Query: 565 tgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||| Sbjct: 113218 tgcctgttgaagaatgagccggcgactcat 113189 Score = 389 bits (196), Expect = e-105 Identities = 201/203 (99%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 113778 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 113719 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 113718 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 113659 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113658 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 113599 Query: 192 agaaagcaaaagcgattcccgta 214 ||||||||||||||||||||||| Sbjct: 113598 agaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 141 gcaggcaagagacaacctggcgaactgaaacatcttagta 180 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 652 bits (329), Expect = 0.0 Identities = 375/390 (96%), Gaps = 14/390 (3%) Strand = Plus / Minus Query: 210 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 270 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 330 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 389 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 390 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 444 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 445 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 505 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 564 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 367901 Query: 565 tgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||| Sbjct: 367900 tgcctgttgaagaatgagccggcgactcat 367871 Score = 652 bits (329), Expect = 0.0 Identities = 375/390 (96%), Gaps = 14/390 (3%) Strand = Plus / Minus Query: 210 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 270 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 330 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 389 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 390 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 444 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 445 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 505 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 564 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 184506 Query: 565 tgcctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||||| Sbjct: 184505 tgcctgttgaagaatgagccggcgactcat 184476 Score = 389 bits (196), Expect = e-105 Identities = 201/203 (99%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 368460 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 368401 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 368400 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 368341 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368340 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 368281 Query: 192 agaaagcaaaagcgattcccgta 214 ||||||||||||||||||||||| Sbjct: 368280 agaaagcaaaagcgattcccgta 368258 Score = 389 bits (196), Expect = e-105 Identities = 201/203 (99%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 185065 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 185006 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 185005 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 184946 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184945 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184886 Query: 192 agaaagcaaaagcgattcccgta 214 ||||||||||||||||||||||| Sbjct: 184885 agaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 141 gcaggcaagagacaacctggcgaactgaaacatcttagta 180 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 111 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 170 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 171 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 231 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 290 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 291 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 350 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 351 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 410 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 411 gaccaccttgcaaggctaaatactcctgggtg 442 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 553 bits (279), Expect = e-154 Identities = 374/401 (93%), Gaps = 5/401 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2624 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 2683 Query: 72 ttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgct 130 |||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||| Sbjct: 2684 ttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgct 2742 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 ||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 2743 gaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaa 2802 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2803 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 2862 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--t 308 ||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| | Sbjct: 2863 aaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaat 2922 Query: 309 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 368 || |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 2923 gctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacc 2981 Query: 369 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 409 |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2982 cgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 553 bits (279), Expect = e-154 Identities = 374/401 (93%), Gaps = 5/401 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 879 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 938 Query: 72 ttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgct 130 |||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||| Sbjct: 939 ttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgct 997 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 ||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 998 gaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaa 1057 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 1117 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--t 308 ||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| | Sbjct: 1118 aaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaat 1177 Query: 309 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 368 || |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1178 gctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacc 1236 Query: 369 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 409 |||||||||| |||||||||||||||||||||||||||||| Sbjct: 1237 cgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 529 bits (267), Expect = e-147 Identities = 503/580 (86%), Gaps = 4/580 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 143944 ggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaaatgcttcggggag 144003 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||||||| Sbjct: 144004 ccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctg 144063 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 144064 aattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggagg 144123 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||||||| Sbjct: 144124 aaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtga 144183 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 | ||||||||||||||||| || || | || | ||||||||||| ||||||||| Sbjct: 144184 agacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgct 144243 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | ||||||||||||| ||| | |||||| | |||| |||| | Sbjct: 144244 gcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaa 144303 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||| Sbjct: 144304 gtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaat 144363 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 144364 attcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtc 144423 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| ||||||||||||||||||| || ||| | | Sbjct: 144424 ggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggagaatgag 144479 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 144480 atctctaaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 529 bits (267), Expect = e-147 Identities = 503/580 (86%), Gaps = 4/580 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| Sbjct: 88907 ggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaaatgcttcggggag 88848 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||||||| Sbjct: 88847 ccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctg 88788 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 88787 aattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggagg 88728 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||||||| Sbjct: 88727 aaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtga 88668 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 311 | ||||||||||||||||| || || | || | ||||||||||| ||||||||| Sbjct: 88667 agacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgct 88608 Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||| |||||| | ||||||||||||| ||| | |||||| | |||| |||| | Sbjct: 88607 gcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaa 88548 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 ||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||| Sbjct: 88547 gtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaat 88488 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 88487 attcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtc 88428 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||||||||| |||||||| ||||||||||||||||||| || ||| | | Sbjct: 88427 ggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggagaatgag 88372 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| ||||||||||||||||||||||||||||||||| Sbjct: 88371 atctctaaccgcgtgcctgttgaagaatgagccggcgact 88332
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 515 bits (260), Expect = e-143 Identities = 268/271 (98%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 83 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 142 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 252 aaacggggttgtgggagagcaatacaagcgt 282 ||||||||||||||||||||||||||||||| Sbjct: 263 aaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 515 bits (260), Expect = e-143 Identities = 268/271 (98%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 83 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 142 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 252 aaacggggttgtgggagagcaatacaagcgt 282 ||||||||||||||||||||||||||||||| Sbjct: 263 aaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 513 bits (259), Expect = e-142 Identities = 269/271 (99%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 324 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 383 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 384 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 444 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 504 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 563 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgc 239 Query: 564 gtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||| Sbjct: 240 gtgcctgttgaagaatgagccggcgactcat 270
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 490 bits (247), Expect = e-135 Identities = 332/358 (92%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| || |||||||||||||| || |||||||||||||||||||| Sbjct: 177056 ggatacctaggcacccagagaggaggaagggcgtagtaatcgacgaaatgcttcggggag 177115 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||| ||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 177116 ttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 177174 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||| Sbjct: 177175 aatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagaggaaa 177234 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 177235 agaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccgtga 177294 Query: 252 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 310 ||||||||||||||||||||||||||||||| |||| |||||||||||| | || ||| Sbjct: 177295 aaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccgaatgc 177354 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 368 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177355 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 177445 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagc 182 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagc 182 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 446 bits (225), Expect = e-122 Identities = 501/588 (85%), Gaps = 19/588 (3%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| || Sbjct: 139244 ggatacctaggcacccaaagacgaggaagggcgtagcaggcgac--aatgcttcgggaag 139187 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| | Sbjct: 139186 ccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc----g 139131 Query: 132 aatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagccagag 187 |||||||| | || |||||||| ||| ||||||| |||||||| | ||||| | | Sbjct: 139130 aatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagccgggg 139071 Query: 188 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 ||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 139070 gaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaaacc 139011 Query: 248 gtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagcggt 303 ||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||||||| Sbjct: 139010 gtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagcggt 138952 Query: 304 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 363 |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| |||| Sbjct: 138951 cgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttacgctc 138892 Query: 364 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 423 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | || Sbjct: 138891 tgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaa 138832 Query: 424 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 483 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138831 ggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaa 138772 Query: 484 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 543 |||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 138771 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccgagcagtgggagga 138715 Query: 544 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138714 gaattg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 138668 Score = 446 bits (225), Expect = e-122 Identities = 501/588 (85%), Gaps = 19/588 (3%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| || Sbjct: 82633 ggatacctaggcacccaaagacgaggaagggcgtagcaggcgac--aatgcttcgggaag 82690 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| | Sbjct: 82691 ccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc----g 82746 Query: 132 aatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagccagag 187 |||||||| | || |||||||| ||| ||||||| |||||||| | ||||| | | Sbjct: 82747 aatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagccgggg 82806 Query: 188 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 ||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 82807 gaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaaacc 82866 Query: 248 gtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagcggt 303 ||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||||||| Sbjct: 82867 gtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagcggt 82925 Query: 304 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 363 |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| |||| Sbjct: 82926 cgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttacgctc 82985 Query: 364 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 423 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | || Sbjct: 82986 tgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaa 83045 Query: 424 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 483 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 83046 ggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaa 83105 Query: 484 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 543 |||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 83106 cccccatcggggagtgaaatagaacatgaaaccgta---agctcccgagcagtgggagga 83162 Query: 544 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 83163 gaattg-gatctctgaccgcgtgcctgttgaagaatgagccggcgact 83209
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 414 bits (209), Expect = e-112 Identities = 219/221 (99%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 374 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 434 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 494 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 553 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 179 Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 220
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 106 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 165 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 166 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 225 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 226 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 285 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 286 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 345 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 346 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 405 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 406 gcaaggaccaccttgcaag 424 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 433 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 492 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 493 ggtagtgaaatagaacgtgaaacc 516 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 89.7 bits (45), Expect = 1e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||| |||||||| ||||||||||||| ||| |||||||||||||||| | ||| Sbjct: 3777 ggatacctatgcacccagagacgaggaagggcatagttagcgacgaaatgcttcagagag 3718 Query: 72 ttgaaaataagcatagatccggag 95 ||| |||||||| |||||| |||| Sbjct: 3717 ttgcaaataagcgtagatcaggag 3694 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcat 3209
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 410 bits (207), Expect = e-111 Identities = 243/254 (95%), Gaps = 1/254 (0%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 79745 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 79686 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| Sbjct: 79685 ttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctg 79627 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79626 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 79567 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 79566 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 79507 Query: 252 aaacggggttgtgg 265 |||||||||||||| Sbjct: 79506 aaacggggttgtgg 79493
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 203 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 262 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 263 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 321 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 322 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 381 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 382 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 441 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 442 gaccgata 449 |||||||| Sbjct: 241 gaccgata 248
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 400 bits (202), Expect = e-108 Identities = 207/209 (99%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 75791 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 75850 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 75851 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgcgg 75910 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75911 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 75970 Query: 192 agaaagcaaaagcgattcccgtagtagcg 220 ||||||||||||||||||||||||||||| Sbjct: 75971 agaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 487 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ggcgaactgaaacatcttag 178 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 394 bits (199), Expect = e-106 Identities = 307/341 (90%), Gaps = 4/341 (1%) Strand = Plus / Minus Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 370 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| |||||||| | ||| ||||||||||||| || ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggagaatgg 5989 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 5988 aatctctgaccgcgtgccttttgaagaatgagccggcgact 5948 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 50 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 109 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 110 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 169 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 170 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 229 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 230 atgggagcagcctaaaccgt 249 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 391 bits (197), Expect = e-105 Identities = 204/205 (99%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 390 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 450 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 510 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcct 569 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcct 179 Query: 570 gttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||| Sbjct: 180 gttgaagaatgagccggcgactcat 204
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 387 bits (195), Expect = e-104 Identities = 251/268 (93%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 327 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 386 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 387 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 447 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 506 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 507 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtg 566 || |||||||| | |||||||||||||||||||||| | | ||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccgggg--ctctgaccgcgtg 237 Query: 567 cctgttgaagaatgagccggcgactcat 594 |||||||||||||||||||||||||||| Sbjct: 238 cctgttgaagaatgagccggcgactcat 265
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 492 gggtagtgaaatagaacgtgaaaccgt 518 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 335 bits (169), Expect = 1e-88 Identities = 427/505 (84%), Gaps = 10/505 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| || || ||||||| || || || ||||||||| |||||| Sbjct: 24 ggatacctaggcacccagggatgaagaagggcataataattgatgaaatgctttggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc-tgct 140 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 141 tattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaa 198 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 250 || |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| || Sbjct: 199 aataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatcgct 258 Query: 251 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 310 |||| ||||||| || ||||||| ||| || || |||||| || || || |||| | Sbjct: 259 aaaatggggttgggg---agcaataaaagtattttgttgctagacggagtagtggagttc 315 Query: 311 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-ccc 369 | ||||||||||| | |||||||||| |||| |||| ||||||||||| | | ||| Sbjct: 316 tgaaccctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaaccc 375 Query: 370 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 429 |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 376 gagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaa 435 Query: 430 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 489 |||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 436 atactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaaccccca 495 Query: 490 gtgggtagtgaaatagaacgtgaaa 514 |||| |||||| |||||| ||||| Sbjct: 496 ttggggagtgaactagaacatgaaa 520 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 299 bits (151), Expect = 5e-78 Identities = 216/238 (90%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 26 ggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||||||| Sbjct: 86 ctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctg 145 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 aattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 205 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 249 |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 206 agaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263 Score = 278 bits (140), Expect = 2e-71 Identities = 206/226 (91%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 566 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 567 aatggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 612
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 295 bits (149), Expect = 8e-77 Identities = 157/160 (98%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1570 ggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 1629 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1630 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctg 1689 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaac 171 |||||||||||||||||||||||||||||||||||||||| Sbjct: 1690 aatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 291 bits (147), Expect = 1e-75 Identities = 212/234 (90%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 17 acctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggggagctga 76 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 77 gaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaatt 136 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 gatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 196 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 249 |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 197 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250 Score = 278 bits (140), Expect = 2e-71 Identities = 206/226 (91%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 553 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 554 aatggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 289 bits (146), Expect = 5e-75 Identities = 214/237 (90%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || Sbjct: 130 ggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcgggaag 189 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||||||| Sbjct: 190 ctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctg 249 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 aattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 309 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 310 agaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366 Score = 276 bits (139), Expect = 8e-71 Identities = 205/225 (91%), Gaps = 4/225 (1%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || || Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggaga 671 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 672 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 716
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 320 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 378 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 379 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 438 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 439 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 498 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 499 gaaatagaacgtgaaaccgtgctgagctcc 528 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 320 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 378 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 379 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 438 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 439 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 498 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 499 gaaatagaacgtgaaaccgtgctgagctcc 528 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 320 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 378 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 379 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 438 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 439 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 498 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 499 gaaatagaacgtgaaaccgtgctgagctcc 528 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 320 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 378 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 379 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 438 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 439 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 498 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 499 gaaatagaacgtgaaaccgtgctgagctcc 528 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 287 bits (145), Expect = 2e-74 Identities = 231/260 (88%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| Sbjct: 26 ggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||| Sbjct: 86 ctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctg 145 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||||||| ||| | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 146 aatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaa 205 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| || Sbjct: 206 agaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcga 265 Query: 252 aaacggggttgtgggagagc 271 || ||||||||||||||||| Sbjct: 266 aagcggggttgtgggagagc 285 Score = 250 bits (126), Expect = 4e-63 Identities = 261/304 (85%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 288 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 347 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 348 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 407 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 408 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 467 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 468 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 527 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 528 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 587 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 597 Query: 588 gact 591 |||| Sbjct: 598 gact 601
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 287 bits (145), Expect = 2e-74 Identities = 231/260 (88%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| Sbjct: 125239 ggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggggag 125180 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||| Sbjct: 125179 ctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctg 125120 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||||||| ||| | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 125119 aatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaa 125060 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| || Sbjct: 125059 agaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcga 125000 Query: 252 aaacggggttgtgggagagc 271 || ||||||||||||||||| Sbjct: 124999 aagcggggttgtgggagagc 124980 Score = 287 bits (145), Expect = 2e-74 Identities = 231/260 (88%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||| | ||||||||||||||||||||||| Sbjct: 94627 ggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggggag 94686 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||||||||||||| ||| ||| |||||| |||||| || ||| | ||||| Sbjct: 94687 ctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctg 94746 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||||||| ||| | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 94747 aatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaa 94806 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| || Sbjct: 94807 agaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcga 94866 Query: 252 aaacggggttgtgggagagc 271 || ||||||||||||||||| Sbjct: 94867 aagcggggttgtgggagagc 94886 Score = 250 bits (126), Expect = 4e-63 Identities = 261/304 (85%), Gaps = 4/304 (1%) Strand = Plus / Minus Query: 288 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 347 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 348 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 407 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 408 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 467 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 468 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 527 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 528 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 587 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 124668 Query: 588 gact 591 |||| Sbjct: 124667 gact 124664 Score = 250 bits (126), Expect = 4e-63 Identities = 261/304 (85%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 288 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 347 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 348 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 407 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 408 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 467 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 468 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 527 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 528 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 587 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 95198 Query: 588 gact 591 |||| Sbjct: 95199 gact 95202
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 32 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 92 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 151 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 152 acaacctggcgaactgaaacat 173 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 542 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 583 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 459 taccgtgagggaaaggtgaaaagaacc 485 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 32 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 92 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 151 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 152 acaacctggcgaactgaaacat 173 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 32 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 92 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 151 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 152 acaacctggcgaactgaaacat 173 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 32 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 92 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 151 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 152 acaacctggcgaactgaaacat 173 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 272 bits (137), Expect = 1e-69 Identities = 225/253 (88%), Gaps = 6/253 (2%) Strand = Plus / Plus Query: 342 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 401 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 402 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 461 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 462 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 521 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 522 gagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatga 581 |||| ||||||||||||||| | | | |||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagcca---gggctctgaccgcgtgcctgttgaagaatga 606 Query: 582 gccggcgactcat 594 ||||||||||||| Sbjct: 607 gccggcgactcat 619 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 141 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 200 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 201 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 260 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 261 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 320 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 321 a 321 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| | Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atag-aatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 37 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 95 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 96 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 155 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 156 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 216 tagcggcgagcgaaatgggagcagcctaaacc 247 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 262 bits (132), Expect = 1e-66 Identities = 178/191 (93%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaa-tgcttcgggga 70 ||||||| |||||||||| |||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 89857 ggataccaaggcacccagagacgaggaagagcgtagtaagcgacgaaaatgcttcgggga 89798 Query: 71 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 ||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| |||| Sbjct: 89797 gttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc-tgct 89739 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 89738 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaa 89679 Query: 191 aagaaagcaaa 201 ||||||||||| Sbjct: 89678 aagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 262 bits (132), Expect = 1e-66 Identities = 178/191 (93%), Gaps = 2/191 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaa-tgcttcgggga 70 ||||||| |||||||||| |||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 413 ggataccaaggcacccagagacgaggaagagcgtagtaagcgacgaaaatgcttcgggga 472 Query: 71 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 ||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| |||| Sbjct: 473 gttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc-tgct 531 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 532 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaa 591 Query: 191 aagaaagcaaa 201 ||||||||||| Sbjct: 592 aagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 441 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 252 bits (127), Expect = 1e-63 Identities = 202/225 (89%), Gaps = 4/225 (1%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 553 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 554 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgact 598 Score = 184 bits (93), Expect = 2e-43 Identities = 197/232 (84%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 ||||||||| |||| ||||| |||||||||| || |||||||| ||| |||| || ||| Sbjct: 17 acctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccgggaagctga 76 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 || |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| Sbjct: 77 caagaagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaata 136 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 || || | ||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 137 aataggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaa 196 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 |||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 197 agcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 252 bits (127), Expect = 1e-63 Identities = 202/225 (89%), Gaps = 4/225 (1%) Strand = Plus / Minus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 115109 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115108 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgact 115064 Score = 252 bits (127), Expect = 1e-63 Identities = 202/225 (89%), Gaps = 4/225 (1%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 86879 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86880 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgact 86924 Score = 192 bits (97), Expect = 9e-46 Identities = 201/236 (85%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||| |||| ||||| |||||||||| || |||||||| ||| |||| || Sbjct: 115650 ggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccgggaag 115591 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | |||| Sbjct: 115590 ctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctccgctg 115531 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || || | ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 115530 aataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaa 115471 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 |||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115470 agaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 192 bits (97), Expect = 9e-46 Identities = 201/236 (85%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||| |||| ||||| |||||||||| || |||||||| ||| |||| || Sbjct: 86338 ggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccgggaag 86397 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | |||| Sbjct: 86398 ctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctccgctg 86457 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || || | ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 86458 aataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaa 86517 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 |||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86518 agaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 248 bits (125), Expect = 2e-62 Identities = 202/225 (89%), Gaps = 7/225 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 || | ||| |||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtgggaggaaga 547 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 548 a---gat-tctgaccgcgtgcctgttgaagaatgagccggcgact 588 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 147 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 206 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 207 ttcccgtagtagcggcgagcgaa 229 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 295 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 354 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 355 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 414 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 415 accttgcaaggctaaatactcctgggtgaccga 447 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 240 bits (121), Expect = 4e-60 Identities = 201/225 (89%), Gaps = 7/225 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| ||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga---gga 583 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 || ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 584 aatagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 627 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 147 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 206 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 207 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 246 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 236 bits (119), Expect = 7e-59 Identities = 223/258 (86%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 26 ggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| Sbjct: 86 ctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctgtaa 145 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| ||||||| Sbjct: 146 aatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaat 205 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||| Sbjct: 206 aaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtga 265 Query: 252 aaacggggttgtgggaga 269 || ||||||||||||||| Sbjct: 266 aagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 491 tgggtagtgaaatagaacgtgaaacc 516 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 236 bits (119), Expect = 7e-59 Identities = 206/234 (88%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| || ||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 4059 ggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggggag 4118 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 | ||||| | |||||||||||||||||||| ||| || |||| || |||||| |||| Sbjct: 4119 tcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctg 4177 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||||||| || | |||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 4178 aatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagaggaaa 4237 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 245 | |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4238 aaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291 Score = 224 bits (113), Expect = 3e-55 Identities = 242/283 (85%), Gaps = 4/283 (1%) Strand = Plus / Plus Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 4605 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcat 4648
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 236 bits (119), Expect = 7e-59 Identities = 206/234 (88%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| || ||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 26 ggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 | ||||| | |||||||||||||||||||| ||| || |||| || |||||| |||| Sbjct: 86 tcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctg 144 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||||||| || | |||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 145 aatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagaggaaa 204 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 245 | |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 205 aaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 224 bits (113), Expect = 3e-55 Identities = 242/283 (85%), Gaps = 4/283 (1%) Strand = Plus / Plus Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 572 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcat 615
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 234 bits (118), Expect = 3e-58 Identities = 199/225 (88%), Gaps = 7/225 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 575 aag----ccctgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 148 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 207 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 208 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||||||| ||||| ||||||||||| || |||||||| ||||||||||| || Sbjct: 17 acctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggggagctgg 76 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 77 aaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 234 bits (118), Expect = 3e-58 Identities = 199/225 (88%), Gaps = 7/225 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2344 aag----ccctgaccgcgtgcctgttgaagaatgagccggcgact 2384 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 148 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 207 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 208 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 105 bits (53), Expect = 2e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| ||||||||||| || |||||||| ||||||||||| Sbjct: 1779 ggatacctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggggag 1838 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaacct 115 || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1839 ctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 234 bits (118), Expect = 3e-58 Identities = 131/134 (97%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 461 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 520 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 521 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 580 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 107932 Query: 581 agccggcgactcat 594 |||||||||||||| Sbjct: 107931 agccggcgactcat 107918
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 314 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 373 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 374 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 433 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 434 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 493 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 494 gtagtgaaatagaacgtgaaa 514 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 190 bits (96), Expect = 4e-45 Identities = 215/251 (85%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| || || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggatgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||||| Sbjct: 84 ttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctgctt 142 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||||||||| Sbjct: 143 attccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagaggaaa 200 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 | |||||||||| ||| || |||||| |||||| |||| |||| |||||||||||| | Sbjct: 201 ataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaaccgcta 260 Query: 252 aaacggggttg 262 ||| ||||||| Sbjct: 261 aaatggggttg 271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcat 606
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 228 bits (115), Expect = 2e-56 Identities = 205/234 (87%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| || ||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 26 ggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 | ||||| | |||||||||||||||||||| ||| || |||| || |||||| |||| Sbjct: 86 tcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctg 144 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| || | |||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 145 aatacataggcggataagagagaacctggtgaactgaaacatcttagtagccagaggaaa 204 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 245 | |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 205 aaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 224 bits (113), Expect = 3e-55 Identities = 242/283 (85%), Gaps = 4/283 (1%) Strand = Plus / Plus Query: 312 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 371 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 372 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 431 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 432 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 491 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 492 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 551 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 572 Query: 552 atctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcat 615
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 224 bits (113), Expect = 3e-55 Identities = 198/225 (88%), Gaps = 6/225 (2%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 -cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 170 bits (86), Expect = 3e-39 Identities = 199/237 (83%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||||| || ||||| ||||||||| | | |||||| | ||| ||||||| Sbjct: 13 ggatacctaggcacctagagacgaagaagggcgtcactaccgacgatacgctccggggag 72 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||||| | ||||||||||||||| ||| || |||||| ||| ||||||| Sbjct: 73 ctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccctgctg 132 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||| |||| |||| || |||||||||||||||||||||| ||||||| Sbjct: 133 aattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggaggaaa 192 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 193 agaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaaccg 249
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 220 bits (111), Expect = 4e-54 Identities = 221/258 (85%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||| |||| ||||| ||||||||||| |||||||||||||||| |||||| Sbjct: 3060 ggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgctttggggag 3119 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| Sbjct: 3120 ctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctgtaa 3179 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| ||||||| Sbjct: 3180 aatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaat 3239 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||| Sbjct: 3240 aaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtga 3299 Query: 252 aaacggggttgtgggaga 269 || ||||||||||||||| Sbjct: 3300 aagcggggttgtgggaga 3317 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 491 tgggtagtgaaatagaacgtgaaacc 516 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgact 3635
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 165 bits (83), Expect = 2e-37 Identities = 200/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | ||| ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggtcgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 509 gtgaaa 514 ||||| Sbjct: 503 atgaaa 508 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 581
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||| ||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 193/226 (85%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 236 || |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 509 gtgaaa 514 ||||| Sbjct: 503 atgaaa 508 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 581
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 165 bits (83), Expect = 2e-37 Identities = 200/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggcgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 149 bits (75), Expect = 1e-32 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||| ||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctagacacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 244 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 216 bits (109), Expect = 6e-53 Identities = 205/235 (87%), Gaps = 4/235 (1%) Strand = Plus / Plus Query: 360 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 419 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 420 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 479 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 480 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 539 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 540 agggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 | | ||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 557 a-gaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcat 610 Score = 206 bits (104), Expect = 6e-50 Identities = 204/235 (86%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| || ||| ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 26 ggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaacgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaacct-tttaaactgcctgct 130 | ||||| | | ||||||||||||||||| ||| || |||| ||| |||||| ||| Sbjct: 86 tcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgcc-gct 144 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 |||| ||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 145 gaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccagaggaa 204 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 245 |||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 205 aagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 216 bits (109), Expect = 6e-53 Identities = 219/256 (85%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||| Sbjct: 26 ggatacctaggcatccagagacgaagaagggcgtagtcagcgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||||||| ||||| |||||||| |||||| ||||| || ||| |||| | Sbjct: 86 ctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacctgtag 145 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||||||| Sbjct: 146 aattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaaa 205 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 |||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||| || Sbjct: 206 agaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaaccgcga 265 Query: 252 aaacggggttgtggga 267 || ||||||||||||| Sbjct: 266 aagcggggttgtggga 281 Score = 196 bits (99), Expect = 6e-47 Identities = 192/221 (86%), Gaps = 4/221 (1%) Strand = Plus / Plus Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 491 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 550 ||| ||||||||||||| ||||||| | |||| |||||||||||||| ||| | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattg- 560 Query: 551 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | || ||||||||||||||||||||||||||||||||||| Sbjct: 561 aacctttgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccg 517 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 52 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 111 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 112 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 171 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 172 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 231 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 232 gggagcagcctaaacc 247 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 329 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 388 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 389 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 448 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 449 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 508 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 509 gtgaaa 514 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 193/226 (85%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 72 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 130 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 131 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 190 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 191 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 236 || |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 554 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 208 bits (105), Expect = 2e-50 Identities = 161/180 (89%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| |||||||||| || |||||||| ||||||||||| Sbjct: 727 ggatacctaggcacccagagacgaagaagggcgtactaaccgacgaaacgcttcggggag 786 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 |||||| |||||| ||||||||||||||| |||||| |||||| || |||| ||||||| Sbjct: 787 ctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcctgctg 846 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 aattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccagaggaaa 906
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 208 bits (105), Expect = 2e-50 Identities = 196/225 (87%), Gaps = 6/225 (2%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 546 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga---gga 690 Query: 547 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 691 ttttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 147 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 206 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 207 ttcccgtagtagcggcgagcgaaatggga 235 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 153 bits (77), Expect = 8e-34 Identities = 193/232 (83%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||||||| ||||| |||||||| | | || ||||| ||||||||||| || Sbjct: 10 acctaggcacccagagacgaagaagggcgcaaataccggcgaaacgcttcggggagctgg 69 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 ||| ||| | |||||| |||| ||| |||||| |||||| | ||| ||| | ||| Sbjct: 70 caatgagctttgatccgaagatccccgaatagggcaacctctagcactacctccataatt 129 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 ||| | |||||||||| |||| || |||||||||||||| ||||||| ||||||||||| Sbjct: 130 catagggaggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaa 189 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 |||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 190 agcaaaagcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 166 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 225 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 226 cgaaatgggagcagcctaaacc 247 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 555 tctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/100 (82%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||||||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 10 acctaggcacccagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 69 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 70 caacaagctttgatccgaagatccccgaatagggcaacct 109
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 486 cc 487 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 145 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 204 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 205 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 77.8 bits (39), Expect = 4e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||| | || ||||||||||||||| | | |||||||||||||||||||| Sbjct: 26 ggatacctaggcatctagagacgaggaagggcgtggttaccgacgaaatgcttcggggag 85 Query: 72 ttgaaaataagcatagatccggagat 97 ||| ||| | || |||||||||||| Sbjct: 86 ttggaaagaggctgagatccggagat 111 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 558 gaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgact 595
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 371 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 430 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 431 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 490 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 491 tgggtagtgaaatagaacgtgaaacc 516 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 200 bits (101), Expect = 4e-48 Identities = 217/256 (84%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1793 ggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggggag 1852 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||| ||| ||||| |||||||| |||||| ||||| || ||| |||| Sbjct: 1853 ctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacctgtat 1912 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 |||| || | |||| ||||| ||||| | ||||||||||||||||||||| ||||||| Sbjct: 1913 aatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagaggaat 1972 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 251 | |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||||| | Sbjct: 1973 aaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaaccgtta 2032 Query: 252 aaacggggttgtggga 267 || ||||||||||||| Sbjct: 2033 aagcggggttgtggga 2048
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 200 bits (101), Expect = 4e-48 Identities = 200/226 (88%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 485 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 ||| || || ||||||||||||| ||||||||| | ||| ||||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggg 616 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 617 --tttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 192/233 (82%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||||||| ||||| |||||||| || | || ||| | ||| ||||||| || Sbjct: 10 acctaggcacccagagacgatgaagggcgcagataccggcgatacgctccggggagctgg 69 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 || |||| | ||||||||||| ||| |||||| ||||| || |||| ||| ||| Sbjct: 70 caacaagctttgatccggagatccccgaatagggcaaccacttgaactacctatataatt 129 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 ||| ||| ||||| ||||| || ||| |||||||||||||||||| ||||||||||| Sbjct: 130 catagttaggtaagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaa 189 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 ||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 190 agcaaaagcgattcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 198 bits (100), Expect = 1e-47 Identities = 196/226 (86%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 |||| ||| ||||||||||| |||||||| | |||| |||||||||||| | | Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtggga-gaag 959 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 || | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 960 aatctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 182 bits (92), Expect = 9e-43 Identities = 203/238 (85%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| | Sbjct: 429 ggatacctagacacctagaaacgatgaagggcgtagaaagcgacgaaatgcttcggttaa 488 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || ||| || | |||||||||||| |||||| |||||| | ||||||| ||||| Sbjct: 489 ctgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgcttgctg 545 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| || | |||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 546 aattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagaggaac 605 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 249 |||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||||| Sbjct: 606 agaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 166 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 225 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 226 cgaaatgggagcagcctaaacc 247 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgact 780 Score = 44.1 bits (22), Expect = 0.52 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcg 44 |||||||||||||| ||||| |||||||| Sbjct: 10 acctaggcacccagagacgatgaagggcg 38
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 222 cgagcgaaatgggagcagcctaaac 246 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/100 (82%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 28 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| ||||||||||||||| |||||| Sbjct: 88 caacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/100 (82%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 28 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | ||||||||||||||| |||||| |||||| Sbjct: 88 caacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 166 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 225 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 226 cgaaatgggagcagcctaaacc 247 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgact 151772 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgact 42431 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Minus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 152353 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 152294 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152293 caacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 41850 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 41909 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41910 caacaagctttgatccgaagattcccgaatagggcaacct 41949
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/100 (82%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 28 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | ||||||||||||||| |||||| |||||| Sbjct: 88 caacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 222 cgagcgaaatgggagcagcctaaac 246 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/100 (82%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 28 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| ||||||||||||||| |||||| Sbjct: 88 caacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 22 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 81 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 82 caacaagctttgatccgaagattcccgaatagggcaacct 121
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgact 688 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 107 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 166 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 167 caacaagctttgatccgaagattcccgaatagggcaacct 206
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 487 ccagtgggtagtgaaatagaacgtgaaacc 516 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||||||| ||||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagagacgatgaagggcgtggaaaccgacgaaacgcttcggggagctgg 68 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 69 aaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 194 bits (98), Expect = 2e-46 Identities = 197/227 (86%), Gaps = 11/227 (4%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 544 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 629 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 683 Query: 545 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | || | | |||||||||||||||||||||||||||||||||||| Sbjct: 684 gtaa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgact 726 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 361 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 420 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 421 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 480 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 481 gaacccccagtgggtagtgaaataga 506 ||||||||| |||| ||||||||||| Sbjct: 458 gaacccccactggggagtgaaataga 483 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 154 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 213 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 214 agtagcggcgagcgaaatgggagcagcctaaacc 247 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 555 tctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgact 564 Score = 54.0 bits (27), Expect = 5e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 26 ccagngacgaggaagggcgtagcaagcgacgaaatgcttcgg 67 |||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1 ccagagacgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 487 ccagtgggtagtgaaatagaacgtgaaacc 516 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||||||| || ||||| ||||||||| | || |||||||| ||||||||||| Sbjct: 24815 ggatacctaggcacctagagacgatgaagggcgtgg-aaccgacgaaacgcttcggggag 24873 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaacct 115 || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24874 ctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 370 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 429 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 430 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 489 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 490 gtgggtagtgaaatagaacgtgaaaccgt 518 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 564 gtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgact 218
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/100 (82%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 10 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 69 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | ||||||||||||||| |||||| |||||| Sbjct: 70 caacaagctttgatccggagattcccgaatagggcaacct 109
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 190 bits (96), Expect = 4e-45 Identities = 196/227 (86%), Gaps = 8/227 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||| Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaaccc 544 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 544 | |||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 545 ctgttggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggca 599 Query: 545 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| || | |||||||||||||| ||||||||||||||||||||| Sbjct: 600 aaaaaagagc-ctgaccgcgtgcctattgaagaatgagccggcgact 645 Score = 125 bits (63), Expect = 2e-25 Identities = 193/234 (82%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 10 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 69 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttt-ta-aactgcctgctgaa 133 || |||| | |||||| |||| |||||||||| |||||| | || |||||||| ||| Sbjct: 70 caacaagcgttgatccgaagatccccaaatagggcaacctctatagaactgcctagagaa 129 Query: 134 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 193 | ||| ||| ||||| | ||| || |||||||||||||| ||||||| ||||||||| Sbjct: 130 ttcatatttaggaaagaggccacccggtgaactgaaacatctaagtagccggaggaaaag 189 Query: 194 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 |||||||| ||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 190 aaagcaaacgcgattcccgtagtagcggcgagcgaaccgggaagagcctaaacc 243
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||| |||||||||||||||||||||||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 28 acctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 88 caacaagctttgatccgaagattcccgaatagggcaacct 127
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 188 bits (95), Expect = 1e-44 Identities = 197/228 (86%), Gaps = 11/228 (4%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 427 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 543 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 544 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 109 bits (55), Expect = 1e-20 Identities = 174/214 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||||| |||||| |||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcgaggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 || |||| | |||||| |||| ||| |||||| |||||| | ||||| || | |||| Sbjct: 88 caacaagctttgatccgaagatccccgaatagggcaacctgtaaaacttccaacagaatt 147 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 ||| | || ||||| ||||| | ||| ||||||||||||||||| ||||||||||| Sbjct: 148 catatgttggaaagaggcaacccagtgaattgaaacatcttagtagctggaggaaaagaa 207 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaa 229 |||||| ||||||||||||||||||||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagcggcgagcgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 188 bits (95), Expect = 1e-44 Identities = 197/228 (86%), Gaps = 11/228 (4%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 427 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 543 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 544 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 166 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 225 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 226 cgaa 229 |||| Sbjct: 219 cgaa 222
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 188 bits (95), Expect = 1e-44 Identities = 158/177 (89%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 485 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 153 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 212 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 213 tagtagcggcgagcgaaatgggagcagcctaaac 246 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 555 tctgaccgcgtgcctgttgaagaatgagccggcgactc 592 |||||||||||||||||||||||||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactc 575
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 188 bits (95), Expect = 1e-44 Identities = 197/228 (86%), Gaps = 11/228 (4%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 427 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 543 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 544 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 109 bits (55), Expect = 1e-20 Identities = 174/214 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||||| |||||| |||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcgaggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 || |||| | |||||| |||| ||| |||||| |||||| | ||||| || | |||| Sbjct: 88 caacaagctttgatccgaagatccccgaatagggcaacctgtaaaacttccaacagaatt 147 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 ||| | || ||||| ||||| | ||| ||||||||||||||||| ||||||||||| Sbjct: 148 catatgttggaaagaggcaacccagtgaattgaaacatcttagtagctggaggaaaagaa 207 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaa 229 |||||| ||||||||||||||||||||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagcggcgagcgaa 241
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 148 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 207 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 208 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 148 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 207 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 208 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 89.7 bits (45), Expect = 1e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 171493 ggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggggag 171434 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaacct 115 || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171433 ctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 89.7 bits (45), Expect = 1e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 121433 ggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggggag 121492 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaacct 115 || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121493 ctggaagcaagctctgatccggagattcccgaatagggcaacct 121536 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 186 bits (94), Expect = 6e-44 Identities = 195/226 (86%), Gaps = 7/226 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 545 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 88 caacaagctttgatccgaagatccccgaatagggcaacct 127
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 186 bits (94), Expect = 6e-44 Identities = 200/233 (85%), Gaps = 2/233 (0%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| ||||||||| | || | |||||||||||||||||| || Sbjct: 17 acctaggcactcagagacgaagaagggcgtggaaaccaacgaaatgcttcggggagctgg 76 Query: 76 aaataagc-atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 134 ||| |||| ||| |||||||||||||| |||||| |||||| || ||| ||| ||||| Sbjct: 77 aaacaagctata-atccggagattcccgaatagggcaacctcttgtactacctattgaat 135 Query: 135 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 194 ||| ||| ||||||||||| || ||| |||||||||||||||||| |||||||||| Sbjct: 136 tcatagataggaaagagacaacccggtgaattgaaacatcttagtagccggaggaaaaga 195 Query: 195 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 196 aagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaacc 248 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 485 |||||||||||| |||||| |||||||| |||||||| |||||||||||| ||||||||| Sbjct: 437 taaatactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacc 496 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgt 518 || ||| ||||||| ||||| ||||||||| Sbjct: 497 cctgtaggggagtgaaaaagaacatgaaaccgt 529 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||| ||||||||||||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgact 600
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 542 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 148 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 207 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 208 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 89.7 bits (45), Expect = 1e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 |||||||||||||||||| ||||| |||||||||||||| |||||||| || ||||||| Sbjct: 24 ggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggggag 83 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaacct 115 || || |||| ||||||||||||||| |||||| |||||| Sbjct: 84 ctggaagcaagctctgatccggagattcccgaatagggcaacct 127 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 186 bits (94), Expect = 6e-44 Identities = 197/226 (87%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 485 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 545 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 | || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 ta---ga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 147 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 206 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 207 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 186 bits (94), Expect = 6e-44 Identities = 195/226 (86%), Gaps = 7/226 (3%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 545 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 546 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 88 caacaagctttgatccgaagatccccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 485 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 486 cccagtgggtagtgaaatagaacgtgaaaccgt 518 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 149 bits (75), Expect = 1e-32 Identities = 196/234 (83%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 17 acctaggcactcagagacgatgaagggcgtggtaaccgacgaaacgcttcggggagctgg 76 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 | | ||| | |||||| |||||||| |||||| |||||| || ||| | | ||||| Sbjct: 77 atacgagctttgatccgaagattcccgaatagggcaacctcttggactccttagtgaatt 136 Query: 136 catgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 194 ||| ||| | | |||||| |||| || ||| ||||||||||||||| || |||||||||| Sbjct: 137 cat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccggaggaaaaga 195 Query: 195 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 196 aagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgt 518 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 170 bits (86), Expect = 3e-39 Identities = 199/237 (83%) Strand = Plus / Plus Query: 12 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 71 ||||||||||| || ||| | ||| ||||||||||| | |||||| | ||||||||||| Sbjct: 13 ggatacctagggactcagagtcgatgaagggcgtagttaccgacgatacgcttcggggag 72 Query: 72 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 131 || || |||| | |||||| |||||||| |||||| ||||||| || ||| |||| || Sbjct: 73 ctggaatcaagctttgatccgaagattcccgaatagggcaaccttatatacttcctgttg 132 Query: 132 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 191 ||| ||| |||| ||||||||||| |||||| |||||||||||||||||| | ||||| Sbjct: 133 aattcatagacaggtaagagacaacccggcgaattgaaacatcttagtagccggtggaaa 192 Query: 192 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||||||||| ||||||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 193 agaaagcaaacgcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 555 tctgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||||||||||||||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgact 592
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 180 bits (91), Expect = 3e-42 Identities = 107/111 (96%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 475 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 534 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 535 gtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 585 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 487 ccagtgggtagtgaaatagaacgtgaaacc 516 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 105 bits (53), Expect = 2e-19 Identities = 187/232 (80%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| ||| Sbjct: 88 caacaagctttgatccggagattcccgaatagggcaacctataaaactacctatataatt 147 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 ||| ||| ||||| ||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 148 catagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggaggaaaagaa 207 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 |||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 487 ccagtgggtagtgaaatagaacgtgaaacc 516 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 162 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 221 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 222 cgagcgaaatgggagcagcctaaacc 247 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 487 ccagtgggtagtgaaatagaacgtgaaacc 516 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 105 bits (53), Expect = 2e-19 Identities = 187/232 (80%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||| ||| ||||| |||||||| || | || ||| | ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggggagctgg 87 Query: 76 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 135 || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| ||| Sbjct: 88 caacaagctttgatccggagattcccgaatagggcaacctataaaactacctatataatt 147 Query: 136 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 195 ||| ||| ||||| ||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 148 catagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggaggaaaagaa 207 Query: 196 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 247 |||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 370 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 429 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 430 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 489 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 490 gtgggtagtgaaatagaacgtgaaaccgt 518 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 555 tctgaccgcgtgcctgttgaagaatgagccggcga 589 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 487 ccagt-gggtagtgaaatagaacgtgaaaccgt 518 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 147 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 206 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 207 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 248 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 73.8 bits (37), Expect = 6e-10 Identities = 84/100 (84%) Strand = Plus / Plus Query: 16 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 75 |||||||||||||| ||||| ||||||||| | || |||||||| |||||||| || || Sbjct: 17 acctaggcacccagagacgaagaagggcgtggaaaccgacgaaacgcttcgggaagctgg 76 Query: 76 aaataagcatagatccggagattcccaaataggtcaacct 115 ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 77 aaacaagctatgatccgaagattcccgaatagggcaacct 116 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 219 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 220 ggcgagcgaaatgggagcagcctaaacc 247 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 219 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 220 ggcgagcgaaatgggagcagcctaaacc 247 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 163 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 222 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 223 gagcgaaatgggagcagcctaaacc 247 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 219 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 220 ggcgagcgaaatgggagcagcctaaacc 247 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 219 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 220 ggcgagcgaaatgggagcagcctaaacc 247 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 219 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 220 ggcgagcgaaatgggagcagcctaaacc 247 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 219 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 220 ggcgagcgaaatgggagcagcctaaacc 247 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 367 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 426 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 427 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 486 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 487 ccagtgggtagtgaaatagaacgtgaaaccgtg 519 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 160 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 219 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 220 ggcgagcgaaatgggagcagcctaaacc 247 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 557 tgaccgcgtgcctgttgaagaatgagccggcgact 591 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 486 c 486 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 153 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 212 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 213 tagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 589 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 289 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 338 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 486 c 486 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 153 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 212 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 213 tagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 602 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 289 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 338 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 425 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 486 c 486 | Sbjct: 5072 c 5072 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 153 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 212 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 213 tagtagcggcgagcgaaatgggagcagcctaaaccg 248 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 556 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 594 ||||||||||||||||||||||||||||||||||||||| Sbjct: 5138 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 5176 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 289 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 338 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,049,497 Number of Sequences: 3902068 Number of extensions: 4049497 Number of successful extensions: 118645 Number of sequences better than 10.0: 26622 Number of HSP's better than 10.0 without gapping: 26446 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74357 Number of HSP's gapped (non-prelim): 42238 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
