ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3f03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U84268.1|HVU84268 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1012 Score = 1183 bits (597), Expect = 0.0 Identities = 597/597 (100%) Strand = Plus / Plus Query: 2 tcgcgccctccctcctcctgtcgtgtcctcccaccccctcgcgcggtggtcgccgggagc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 tcgcgccctccctcctcctgtcgtgtcctcccaccccctcgcgcggtggtcgccgggagc 86 Query: 62 agagcaccacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 agagcaccacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacac 146 Query: 122 cgatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 cgatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaa 206 Query: 182 ggctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgt 266 Query: 242 tgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 tgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgt 326 Query: 302 tcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 tcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggc 386 Query: 362 ccaggatgacctggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 ccaggatgacctggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcag 446 Query: 422 cagcaaccaccatgaatacaggaatctgttgaaagaacttgttgttcagggcttgcttcg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cagcaaccaccatgaatacaggaatctgttgaaagaacttgttgttcagggcttgcttcg 506 Query: 482 gttgaaagagccagctgtactgctccgctgccgcaaagaagatcaccataatgtggaatc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 gttgaaagagccagctgtactgctccgctgccgcaaagaagatcaccataatgtggaatc 566 Query: 542 tgtactgcattcagcaaagaatgaatatgcatcaaaagcagatgtccatgagccaga 598 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 tgtactgcattcagcaaagaatgaatatgcatcaaaagcagatgtccatgagccaga 623
>gb|U84269.1|HVU84269 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1057 Score = 1176 bits (593), Expect = 0.0 Identities = 596/597 (99%) Strand = Plus / Plus Query: 2 tcgcgccctccctcctcctgtcgtgtcctcccaccccctcgcgcggtggtcgccgggagc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 tcgcgccctccctcctcctgtcgtgtcctcccaccccctcgcgcggtggtcgccgggagc 86 Query: 62 agagcaccacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 agagcaccacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacac 146 Query: 122 cgatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 cgatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaa 206 Query: 182 ggctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgt 266 Query: 242 tgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 tgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgt 326 Query: 302 tcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 tcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggc 386 Query: 362 ccaggatgacctggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 ccaggatgacctggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcag 446 Query: 422 cagcaaccaccatgaatacaggaatctgttgaaagaacttgttgttcagggcttgcttcg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cagcaaccaccatgaatacaggaatctgttgaaagaacttgttgttcagggcttgcttcg 506 Query: 482 gttgaaagagccagctgtactgctccgctgccgcaaagaagatcaccataatgtggaatc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 gttgaaagagccagctgtactgctccgctgccgcaaagaagatcaccataatgtggaatc 566 Query: 542 tgtactgcattcagcaaagaatgaatatgcatcaaaagcagatgtccatgagccaga 598 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 567 tgtactgcattcagcaaagaatgaatatgcatcaaaagcagatgtccctgagccaga 623
>emb|Z33632.1|HVATPAX H.vulgare (Gerbel) mRNA for adenosine triphosphatase Length = 1034 Score = 1114 bits (562), Expect = 0.0 Identities = 574/578 (99%) Strand = Plus / Plus Query: 21 gtcgtgtcctcccaccccctcgcgcggtggtcgccgggagcagagcaccacagtcgaacg 80 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6 gtcgtgtcctcccaccccctcacgcggtggtcgccgggagcagagcaccacagtcgaacg 65 Query: 81 atcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtctccaggcagatc 140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 atcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtctccaggcagatc 125 Query: 141 cagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagatctccgtc 200 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 126 cagcagatggtgcggttcatccgccaggaggccgaggagccggccggcgagatctccgtc 185 Query: 201 tccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaag 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 tccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaag 245 Query: 261 atcagacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtac 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 atcagacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtac 305 Query: 321 tctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacctggttaac 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 tctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacctggttaac 365 Query: 381 aaaatgaaagaggatgcaatgaaggagctcctcaatatcagcagcaaccaccatgaatac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aaaatgaaagaggatgcaatgaaggagctcctcaatatcagcagcaaccaccatgaatac 425 Query: 441 aggaatctgttgaaagaacttgttgttcagggcttgcttcggttgaaagagccagctgta 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aggaatctgttgaaagaacttgttgttcagggcttgcttcggttgaaagagccagctgta 485 Query: 501 ctgctccgctgccgcaaagaagatcaccataatgtggaatctgtactgcattcagcaaag 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 ctgctccgctgccgcaaagaagatcaccataatgtggaatctgtactgcattcagcaaag 545 Query: 561 aatgaatatgcatcaaaagcagatgtccatgagccaga 598 |||||||||||||||||||||||||||||||||||||| Sbjct: 546 aatgaatatgcatcaaaagcagatgtccatgagccaga 583
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA, complete cds Length = 1970 Score = 1011 bits (510), Expect = 0.0 Identities = 573/594 (96%) Strand = Plus / Plus Query: 2 tcgcgccctccctcctcctgtcgtgtcctcccaccccctcgcgcggtggtcgccgggagc 61 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 36 tcgcgccctccctcctcctgtcgtgtcctcccacacccccgcgcggtggtcgccggaagc 95 Query: 62 agagcaccacagtcgaacgatcgtcagatccgccgccgccgacgccaagatgaacgacac 121 || || ||||||||| || |||||||||||||||||||||||||||| |||||||||||| Sbjct: 96 agcgccccacagtcggacaatcgtcagatccgccgccgccgacgccacgatgaacgacac 155 Query: 122 cgatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaa 181 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 cgatgtctccaagcagatccagcagatggtgcggttcatccgccaggaggccgaggagaa 215 Query: 182 ggctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgt 241 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 216 ggctggcgagatctccgtctccgctgaggaggaattcaacattgagaagctgcaacttgt 275 Query: 242 tgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgt 301 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 276 tgaagctgagaaaaagaagatcaggcaagaatatgagcggaaagagaagcaggttgatgt 335 Query: 302 tcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggc 361 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 336 tcggaagaaaattgagtactctatgcagctgaatgcttctcgcatcaaagtgcttcaggc 395 Query: 362 ccaggatgacctggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcag 421 |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 396 ccaggatgacctggttaataaaatgaaagaggatgcaatgaaggaactcctgaatatcag 455 Query: 422 cagcaaccaccatgaatacaggaatctgttgaaagaacttgttgttcagggcttgcttcg 481 |||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||| Sbjct: 456 cagcaaccaccatgaatacaagaatctgttaaaagaactcgttgttcagggcctgcttcg 515 Query: 482 gttgaaagagccagctgtactgctccgctgccgcaaagaagatcaccataatgtggaatc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 gttgaaagagccagctgtactgctccgctgccgcaaagaagatcaccataatgtggaatc 575 Query: 542 tgtactgcattcagcaaagaatgaatatgcatcaaaagcagatgtccatgagcc 595 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 576 tgtactgcattcagcaaagaatgagtatgcatcaaaagcagatgtccatgagcc 629
>gb|DQ272489.1| Triticum aestivum vacuolar proton ATPase subunit E mRNA, complete cds Length = 742 Score = 924 bits (466), Expect = 0.0 Identities = 505/518 (97%) Strand = Plus / Plus Query: 81 atcgtcagatccgccgccgccgacgccaagatgaacgacaccgatgtctccaggcagatc 140 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 4 atcgtcagatccgccgccgcgtacgccaagatgaacgacaccgatgtctccaagcagatc 63 Query: 141 cagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagatctccgtc 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 cagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagatctccgtc 123 Query: 201 tccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaag 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 tccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaag 183 Query: 261 atcagacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtac 320 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 atcaggcaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagtac 243 Query: 321 tctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacctggttaac 380 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 244 tctatgcagctgaatgcttctcgcatcaaagtgcttcaggcccaggatgacctggttaat 303 Query: 381 aaaatgaaagaggatgcaatgaaggagctcctcaatatcagcagcaaccaccatgaatac 440 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 304 aaaatgaaagaggatgcaatgaaggaactcctgaatatcagcagcaaccaccatgaatac 363 Query: 441 aggaatctgttgaaagaacttgttgttcagggcttgcttcggttgaaagagccagctgta 500 ||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 364 aggaatctgttaaaagaactcgttgttcagggcctgcttcggttgaaagagccagctgta 423 Query: 501 ctgctccgctgccgcaaagaagatcaccataatgtggaatctgtactgcattcagcaaag 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 ctgctccgctgccgcaaagaagatcaccataatgtggaatctgtactgcattcagcaaag 483 Query: 561 aatgaatatgcatcaaaagcagatgtccatgagccaga 598 ||||| |||||||||||||||||||||||||||||||| Sbjct: 484 aatgagtatgcatcaaaagcagatgtccatgagccaga 521
>dbj|AK071200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K07, full insert sequence Length = 1134 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%) Strand = Plus / Plus Query: 97 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggt 156 |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||| Sbjct: 187 ccgccgccgccaagatgaacgacgccgatgtcgccaagcagatccagcagatggtgcggt 246 Query: 157 tcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaat 216 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct: 247 tcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggaggagt 306 Query: 217 tcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatg 276 |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 307 tcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaagaatatg 366 Query: 277 agcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatg 336 | |||||||||||||| || || ||| | ||||||||||||||||||||||||||||||| Sbjct: 367 aacggaaagagaagcaagtcgaagttagaaagaaaattgagtactctatgcagctgaatg 426 Query: 337 cttcccgtatcaaagtgcttcaggcccaggatgacctggttaacaaaatgaaagaggatg 396 |||| || |||||||||||||| || |||||||| ||||||| ||||||||||||| Sbjct: 427 cttctcgcatcaaagtgcttcaagctcaggatgatttggttaattccatgaaagaggatg 486 Query: 397 caatgaaggagctcctcaatatcagcagcaaccaccatgaatacaggaatctgttgaaag 456 | | ||| | ||||| | ||||| ||||||||||||||||| ||| || ||||||| Sbjct: 487 ctacaaagcaactcctgcgtgtcagccacaaccaccatgaatacaagaaccttttgaaag 546 Query: 457 aacttgttgttcagggcttgcttcggttgaaagagccagctgtactgctccgctgccgca 516 |||| || |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 547 aactcgtcgttcagggtttgcttcggttgaaagagccagcggtacttctccgttgccgca 606 Query: 517 aagaagatcaccataatgtggaatctgtactgcattcagcaaagaatgaatatgcatcaa 576 ||||||| || ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 607 aagaagaccatcatcatgtggaatctgtactgcattcagcaaagaatgaatatgcgtcaa 666 Query: 577 aagcaga 583 ||||||| Sbjct: 667 aagcaga 673
>ref|NM_192458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 549 bits (277), Expect = e-153 Identities = 424/473 (89%) Strand = Plus / Plus Query: 111 atgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccaggag 170 ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgaacgacgccgatgtcgccaagcagatccagcagatggtgcggttcatccgccaggag 60 Query: 171 gccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 230 |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 61 gccgaggagaaggccagcgagatctccgtctccgccgaggaggagttcaatattgagaag 120 Query: 231 ctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaag 290 || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 121 cttcaacttgttgaagctgagaaaaagaagatcaggcaagaatatgaacggaaagagaag 180 Query: 291 caggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaa 350 || || || ||| | ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 181 caagtcgaagttagaaagaaaattgagtactctatgcagctgaatgcttctcgcatcaaa 240 Query: 351 gtgcttcaggcccaggatgacctggttaacaaaatgaaagaggatgcaatgaaggagctc 410 |||||||| || |||||||| ||||||| |||||||||||||| | ||| | ||| Sbjct: 241 gtgcttcaagctcaggatgatttggttaattccatgaaagaggatgctacaaagcaactc 300 Query: 411 ctcaatatcagcagcaaccaccatgaatacaggaatctgttgaaagaacttgttgttcag 470 || | ||||| ||||||||||||||||| ||| || ||||||||||| || |||||| Sbjct: 301 ctgcgtgtcagccacaaccaccatgaatacaagaaccttttgaaagaactcgtcgttcag 360 Query: 471 ggcttgcttcggttgaaagagccagctgtactgctccgctgccgcaaagaagatcaccat 530 || ||||||||||||||||||||||| ||||| ||||| |||||||||||||| || ||| Sbjct: 361 ggtttgcttcggttgaaagagccagcggtacttctccgttgccgcaaagaagaccatcat 420 Query: 531 aatgtggaatctgtactgcattcagcaaagaatgaatatgcatcaaaagcaga 583 |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 421 catgtggaatctgtactgcattcagcaaagaatgaatatgcgtcaaaagcaga 473
>gb|AY104382.1| Zea mays PCO079851 mRNA sequence Length = 1233 Score = 527 bits (266), Expect = e-146 Identities = 443/502 (88%) Strand = Plus / Plus Query: 97 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggt 156 |||||| |||||||||||| ||| ||||||| ||| ||||||||||||||||||||||| Sbjct: 177 ccgccgccgccaagatgaatgacgccgatgtagccaagcagatccagcagatggtgcggt 236 Query: 157 tcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaat 216 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 237 tcatccgccaggaggccgacgagaaggccaacgagatctccgtctccgccgaggaggaat 296 Query: 217 tcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatg 276 |||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 297 tcaacattgagaagttgcagcttgttgaagctgagaaaaagaagattagacaagagtatg 356 Query: 277 agcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatg 336 | || ||||||||||||||||| || || |||||||||||||||||||||||| |||||| Sbjct: 357 aacgcaaagagaagcaggttgaagtacgcaagaaaattgagtactctatgcagttgaatg 416 Query: 337 cttcccgtatcaaagtgcttcaggcccaggatgacctggttaacaaaatgaaagaggatg 396 |||| || |||||||| ||||| || |||||||| || || |||||||||||||| |||| Sbjct: 417 cttctcgcatcaaagttcttcaagctcaggatgatctagtaaacaaaatgaaagacgatg 476 Query: 397 caatgaaggagctcctcaatatcagcagcaaccaccatgaatacaggaatctgttgaaag 456 | |||||||| || ||| | ||||| ||||||||||||||||| ||| || ||||||| Sbjct: 477 ccatgaaggaacttctccttgtcagccacaaccaccatgaatacaagaaccttttgaaag 536 Query: 457 aacttgttgttcagggcttgcttcggttgaaagagccagctgtactgctccgctgccgca 516 | || | ||||||| ||||| || |||||||||||||| ||| ||||||| ||||||| Sbjct: 537 acctaatcattcagggtttgctccgtttgaaagagccagcagtattgctccgttgccgca 596 Query: 517 aagaagatcaccataatgtggaatctgtactgcattcagcaaagaatgaatatgcatcaa 576 | || ||||||||| |||||||||| || ||||||||||||||| |||| |||||||||| Sbjct: 597 aggatgatcaccatcatgtggaatcagtgctgcattcagcaaagcatgagtatgcatcaa 656 Query: 577 aagcagatgtccatgagccaga 598 |||||||||||||||| ||||| Sbjct: 657 aagcagatgtccatgaaccaga 678
>gb|AF152600.1|AF152600 Zea mays unknown mRNA Length = 497 Score = 458 bits (231), Expect = e-125 Identities = 357/399 (89%) Strand = Plus / Plus Query: 97 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggt 156 |||||| |||||||||||| ||| ||||||| ||| ||||||||||||||||||||||| Sbjct: 99 ccgccgccgccaagatgaatgacgccgatgtagccaagcagatccagcagatggtgcggt 158 Query: 157 tcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaat 216 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 159 tcatccgccaggaggccgacgagaaggccaacgagatctccgtctccgccgaggaggaat 218 Query: 217 tcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatg 276 ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 219 tcaacattgagaagctgcagcttgttgaagctgagaaaaagaagattagacaagagtatg 278 Query: 277 agcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatg 336 | || ||||||||||||||||| || ||||||||||||||||||||||||||| |||||| Sbjct: 279 aacgcaaagagaagcaggttgaagtacggaagaaaattgagtactctatgcagttgaatg 338 Query: 337 cttcccgtatcaaagtgcttcaggcccaggatgacctggttaacaaaatgaaagaggatg 396 |||| || |||||||| ||||| || |||||||| || || |||||||||||||| |||| Sbjct: 339 cttctcgcatcaaagttcttcaagctcaggatgatctagtaaacaaaatgaaagacgatg 398 Query: 397 caatgaaggagctcctcaatatcagcagcaaccaccatgaatacaggaatctgttgaaag 456 | |||||||| |||||| | ||||| ||||||||||||||||| ||| || ||||||| Sbjct: 399 cgatgaaggaactcctccttgtcagccacaaccaccatgaatacaagaaccttttgaaag 458 Query: 457 aacttgttgttcagggcttgcttcggttgaaagagccag 495 | || |||||||||||||||| || ||||||||||||| Sbjct: 459 atctaattgttcagggcttgctccgtttgaaagagccag 497
>gb|BT018259.1| Zea mays clone EL01T0202A06.c mRNA sequence Length = 684 Score = 234 bits (118), Expect = 3e-58 Identities = 295/354 (83%) Strand = Plus / Plus Query: 245 agctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgttcg 304 |||||||||||||||||| || | ||| ||||| | || |||||||||||||| | || Sbjct: 1 agctgagaaaaagaagattagtctagagtatgaacccaaggagaagcaggttgaattccg 60 Query: 305 gaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggccca 364 |||||||||||||| |||||||||| |||||||||| || |||||||| ||||| || || Sbjct: 61 gaagaaaattgagtcctctatgcagttgaatgcttctcgcatcaaagttcttcaagctca 120 Query: 365 ggatgacctggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcagcag 424 ||| || | || ||||||||||||| ||||| |||||||| ||| || | ||||| Sbjct: 121 ggaggatgtagtaaacaaaatgaaaggcgatgcgatgaaggaactcttccttgtcagcca 180 Query: 425 caaccaccatgaatacaggaatctgttgaaagaacttgttgttcagggcttgcttcggtt 484 || || ||||||| ||||| || |||||||| || ||||||||||||| || || || Sbjct: 181 catcctccatgaaggcaggacccttttgaaagatctaattgttcagggcttcctccgttt 240 Query: 485 gaaagagccagctgtactgctccgctgccgcaaagaagatcaccataatgtggaatctgt 544 ||||||||||| || | ||||||| |||||||| ||||||| |||| |||||||||| || Sbjct: 241 gaaagagccaggtgaattgctccgttgccgcaaggaagatccccatcatgtggaatcagt 300 Query: 545 actgcattcagcaaagaatgaatatgcatcaaaagcagatgtccatgagccaga 598 |||||||||||||||| | || ||||||||||||||||| |||||||| ||||| Sbjct: 301 actgcattcagcaaagcacgagtatgcatcaaaagcagaggtccatgaaccaga 354
>emb|X92118.1|MCVATPASE M.crystallinum mRNA for vacuolar proton ATPase subunit E Length = 1070 Score = 200 bits (101), Expect = 4e-48 Identities = 224/265 (84%) Strand = Plus / Plus Query: 106 ccaagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgcc 165 |||| |||||||||||||||||| | ||||||||||||||||| | ||||| |||| Sbjct: 71 ccaaaatgaacgacaccgatgtccaaaaccagatccagcagatggtcagattcatgcgcc 130 Query: 166 aggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattg 225 | || || ||||||||||| ||||||||| ||||| ||||| || ||||||||||||| Sbjct: 131 aagaagcggaggagaaggccaacgagatctctgtctctgccgaagaagaattcaacattg 190 Query: 226 agaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaag 285 ||||| ||||| | |||||||| ||||| ||||||||||| ||||| |||||||| || | Sbjct: 191 agaagttgcaattagttgaagcggagaagaagaagatcaggcaagagtatgagcgcaagg 250 Query: 286 agaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgta 345 |||||| || || ||||||| |||||||||||||||||||||||| |||||||| || | Sbjct: 251 cgaagcaagtggacgttcggaggaaaattgagtactctatgcagctcaatgcttctcgga 310 Query: 346 tcaaagtgcttcaggcccaggatga 370 |||| || ||||| || |||||||| Sbjct: 311 tcaaggttcttcaagctcaggatga 335
>gb|AF165939.1|AF165939 Citrus limon vacuolar V-H+ATPase subunit E mRNA, complete cds Length = 1057 Score = 198 bits (100), Expect = 1e-47 Identities = 220/260 (84%) Strand = Plus / Plus Query: 111 atgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccaggag 170 ||||||||| ||||||| || | |||||||||||||||||||||||| |||||||| || Sbjct: 123 atgaacgacgccgatgtttcgaagcagatccagcagatggtgcggtttatccgccaagaa 182 Query: 171 gccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 230 ||||| ||||| || ||||||||| || || ||||| || ||||||||||| |||||| Sbjct: 183 gccgaagagaaagccaacgagatctcagtttctgccgaagaagaattcaacatagagaag 242 Query: 231 ctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaag 290 |||| || || ||||| ||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 243 ttgcagctggtggaagcagagaagaagaagatcagacaagagtacgagcggaaagagaag 302 Query: 291 caggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaa 350 || || || | | ||||| ||||||||||| ||||||||||||||||| || |||||| Sbjct: 303 caagtcgaaatcagaaagaagattgagtactccatgcagctgaatgcttctcggatcaaa 362 Query: 351 gtgcttcaggcccaggatga 370 || ||||| || |||||||| Sbjct: 363 gttcttcaagctcaggatga 382
>dbj|AB037106.1| Citrus unshiu Cit-VATP E-1 mRNA for vacuolar H+-ATPase E subunit-1, complete cds Length = 990 Score = 190 bits (96), Expect = 4e-45 Identities = 219/260 (84%) Strand = Plus / Plus Query: 111 atgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccaggag 170 ||||||||| | ||||| || | |||||||||||||||||||||||| |||||||| || Sbjct: 61 atgaacgacgctgatgtttcgaagcagatccagcagatggtgcggtttatccgccaagaa 120 Query: 171 gccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 230 ||||| ||||| || ||||||||| || || ||||| || ||||||||||| |||||| Sbjct: 121 gccgaagagaaagccaacgagatctcagtttctgccgaagaagaattcaacatagagaag 180 Query: 231 ctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaag 290 |||| || || ||||| ||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 181 ttgcagctggtggaagcagagaagaagaagatcagacaagagtacgagcggaaagagaag 240 Query: 291 caggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaa 350 || || || | | ||||| ||||||||||| ||||||||||||||||| || |||||| Sbjct: 241 caagtcgaaatcagaaagaagattgagtactccatgcagctgaatgcttctcggatcaaa 300 Query: 351 gtgcttcaggcccaggatga 370 || ||||| || |||||||| Sbjct: 301 gttcttcaagctcaggatga 320
>gb|BT014457.1| Lycopersicon esculentum clone 133804F, mRNA sequence Length = 1142 Score = 184 bits (93), Expect = 2e-43 Identities = 225/269 (83%) Strand = Plus / Plus Query: 108 aagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccag 167 ||||||||||| | ||||| || | |||||||||||||||||| | |||||||| ||| Sbjct: 163 aagatgaacgatgcagatgtatcaaagcagatccagcagatggtcagattcatccgtcag 222 Query: 168 gaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgag 227 || || || || || || |||||||||||||||||||| || ||||||||||||||| Sbjct: 223 gaagctgaagaaaaagccaatgagatctccgtctccgccgaagaagaattcaacattgag 282 Query: 228 aagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaagag 287 ||| |||| || || ||||| |||||||||||||||||||| ||||| ||||| || ||| Sbjct: 283 aagttgcagctagtggaagcagagaaaaagaagatcagacaggaatacgagcgtaaggag 342 Query: 288 aagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatc 347 || || ||||||||||| ||||||||||||||||| ||||| || ||||| || || ||| Sbjct: 343 aaacaagttgatgttcgcaagaaaattgagtactccatgcaactcaatgcctctcgaatc 402 Query: 348 aaagtgcttcaggcccaggatgacctggt 376 || || ||||| || ||||||||| |||| Sbjct: 403 aaggttcttcaagctcaggatgacttggt 431
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 184 bits (93), Expect = 2e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 97 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggt 156 |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||| Sbjct: 26805315 ccgccgccgccaagatgaacgacgccgatgtcgccaagcagatccagcagatggtgcggt 26805374 Query: 157 tcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggagg 213 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 26805375 tcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggagg 26805431 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 468 cagggcttgcttcggttgaaagagccagctgtactgctccgctgccgcaaagaagatcac 527 ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| || Sbjct: 26808383 cagggtttgcttcggttgaaagagccagcggtacttctccgttgccgcaaagaagaccat 26808442 Query: 528 cataatgtggaatctgtactgcattcagcaaagaatgaatatgcatcaaaagcaga 583 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 26808443 catcatgtggaatctgtactgcattcagcaaagaatgaatatgcgtcaaaagcaga 26808498 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 211 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaag 270 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 26807128 aggagttcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaag 26807187 Query: 271 aatatgagcggaaagagaagcaggttgatgttcggaagaaaat 313 ||||||| |||||||||||||| || || ||| | |||||||| Sbjct: 26807188 aatatgaacggaaagagaagcaagtcgaagttagaaagaaaat 26807230 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 314 tgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacct 373 ||||||||||||||||||||||||||| || |||||||||||||| || |||||||| | Sbjct: 26807876 tgagtactctatgcagctgaatgcttctcgcatcaaagtgcttcaagctcaggatgattt 26807935 Query: 374 ggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcagcagcaaccacca 433 |||||| |||||||||||||| | ||| | ||||| | ||||| ||||||||| Sbjct: 26807936 ggttaattccatgaaagaggatgctacaaagcaactcctgcgtgtcagccacaaccacca 26807995 Query: 434 tgaatacaggaatctgttgaaagaacttgttgttcagg 471 |||||||| ||| || ||||||||||| || ||||||| Sbjct: 26807996 tgaatacaagaaccttttgaaagaactcgtcgttcagg 26808033 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 156 ttcatccgccaggaggccgaggagaaggctggcgagatc 194 ||||||||||||||||||| |||||||| | ||||||| Sbjct: 6702203 ttcatccgccaggaggccgtcgagaaggccgccgagatc 6702165
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 184 bits (93), Expect = 2e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 97 ccgccgacgccaagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggt 156 |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||| Sbjct: 40964 ccgccgccgccaagatgaacgacgccgatgtcgccaagcagatccagcagatggtgcggt 41023 Query: 157 tcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggagg 213 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 41024 tcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggagg 41080 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 468 cagggcttgcttcggttgaaagagccagctgtactgctccgctgccgcaaagaagatcac 527 ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| || Sbjct: 44032 cagggtttgcttcggttgaaagagccagcggtacttctccgttgccgcaaagaagaccat 44091 Query: 528 cataatgtggaatctgtactgcattcagcaaagaatgaatatgcatcaaaagcaga 583 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 44092 catcatgtggaatctgtactgcattcagcaaagaatgaatatgcgtcaaaagcaga 44147 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 211 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaag 270 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 42777 aggagttcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaag 42836 Query: 271 aatatgagcggaaagagaagcaggttgatgttcggaagaaaat 313 ||||||| |||||||||||||| || || ||| | |||||||| Sbjct: 42837 aatatgaacggaaagagaagcaagtcgaagttagaaagaaaat 42879 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 314 tgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacct 373 ||||||||||||||||||||||||||| || |||||||||||||| || |||||||| | Sbjct: 43525 tgagtactctatgcagctgaatgcttctcgcatcaaagtgcttcaagctcaggatgattt 43584 Query: 374 ggttaacaaaatgaaagaggatgcaatgaaggagctcctcaatatcagcagcaaccacca 433 |||||| |||||||||||||| | ||| | ||||| | ||||| ||||||||| Sbjct: 43585 ggttaattccatgaaagaggatgctacaaagcaactcctgcgtgtcagccacaaccacca 43644 Query: 434 tgaatacaggaatctgttgaaagaacttgttgttcagg 471 |||||||| ||| || ||||||||||| || ||||||| Sbjct: 43645 tgaatacaagaaccttttgaaagaactcgtcgttcagg 43682
>gb|AF499722.1| Thellungiella halophila vacuolar ATPase subunit E-like protein mRNA, complete cds Length = 1023 Score = 167 bits (84), Expect = 5e-38 Identities = 207/248 (83%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaag 182 ||||| || ||||||||||||||||||||| | || |||||||| ||||| ||||||||| Sbjct: 95 gatgtgtcgaggcagatccagcagatggtgagatttatccgccaagaggcggaggagaag 154 Query: 183 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 242 || ||||||||| |||||||| || || ||||||||||| ||||| ||||| || ||| Sbjct: 155 gcaaacgagatctcggtctccgctgaagaagaattcaacatcgagaaactgcagctagtt 214 Query: 243 gaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgtt 302 || || ||||| ||||||||||| ||||| |||||| ||| |||||||| | ||| || Sbjct: 215 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgacgtg 274 Query: 303 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcc 362 || ||||| ||||| ||||| |||||||| |||||||| | |||||||| ||||| || Sbjct: 275 cgcaagaagattgattactcgatgcagctaaatgcttcaaggatcaaagttcttcaagcg 334 Query: 363 caggatga 370 |||||||| Sbjct: 335 caggatga 342 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaagagccagctgt 499 |||||||| | ||||||||||||||||| ||| |||| Sbjct: 435 ttgttcagtgtttgcttcggttgaaagaaccatctgt 471
>emb|AJ245933.1|BVU245933 Beta vulgaris partial mRNA for V-type H(+)-ATPase subunit E Length = 558 Score = 155 bits (78), Expect = 2e-34 Identities = 204/246 (82%) Strand = Plus / Plus Query: 134 gcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagat 193 |||||||||||||||||| | ||||||||||| || || |||||||| ||| ||||| Sbjct: 3 gcagatccagcagatggttagattcatccgccaagaagcggaggagaaagctaatgagat 62 Query: 194 ctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgagaa 253 ||| || | || || ||||| || |||||||||||| |||| | |||||||| ||||| Sbjct: 63 ctctgttgctgctgaagaggagtttaacattgagaagttgcagttagttgaagcggagaa 122 Query: 254 aaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaat 313 ||||||||||| || || |||||||||||||||||||| |||||| |||| | |||||| Sbjct: 123 gaagaagatcaggcaggagtatgagcggaaagagaagcaagttgatattcgcaggaaaat 182 Query: 314 tgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacct 373 |||||||||||||||||| ||||| || | ||||| || ||||| || |||||||| || Sbjct: 183 tgagtactctatgcagctcaatgcatctaggatcaaggtccttcaagctcaggatgatct 242 Query: 374 ggttaa 379 ||||| Sbjct: 243 agttaa 248 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 450 ttgaaagaacttgttgttcagggcttgcttcggttgaaagagccagctgtactgctccgc 509 |||||||| |||||||||||| | |||||| | |||||||| || ||||| || | ||| Sbjct: 319 ttgaaagagcttgttgttcagagtttgcttagattgaaagaacctgctgtgttgttgcgc 378 Query: 510 tgccgcaaaga 520 ||||| ||||| Sbjct: 379 tgccggaaaga 389
>ref|NM_105094.1| Arabidopsis thaliana VHA-E3; hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT1G64200 (VHA-E3) mRNA, complete cds Length = 714 Score = 151 bits (76), Expect = 3e-33 Identities = 187/224 (83%) Strand = Plus / Plus Query: 111 atgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccaggag 170 ||||||||| |||||| |||| ||||||||||||||||| |||| ||||||||||| Sbjct: 1 atgaacgacgccgatgcttccatccagatccagcagatggttaggtttatccgccaggaa 60 Query: 171 gccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgagaag 230 ||||| || |||||| |||||||||| ||||| | || || ||||||||||||||||| Sbjct: 61 gccgaagaaaaggctaacgagatctccatctcctctgaagaagaattcaacattgagaaa 120 Query: 231 ctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaag 290 |||| ||||||||||| ||||| |||||||| |||||||| |||||| ||| ||||| Sbjct: 121 ttgcagcttgttgaagcagagaagaagaagattagacaagagtatgagaagaaggagaaa 180 Query: 291 caggttgatgttcggaagaaaattgagtactctatgcagctgaa 334 ||||| ||||| | ||||| ||||| ||||| ||||| ||||| Sbjct: 181 caggtcgatgtcagaaagaagattgattactcaatgcaactgaa 224
>ref|NM_117185.3| Arabidopsis thaliana TUF (TUFF) AT4G11150 (TUF) mRNA, complete cds Length = 1057 Score = 143 bits (72), Expect = 8e-31 Identities = 195/236 (82%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaag 182 ||||| || ||||||||||||||||||||| | || |||||||| || || || ||||| Sbjct: 142 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 201 Query: 183 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 242 || ||||||||| || || || || || ||||||||||||||||| || || |||||| Sbjct: 202 gcaaacgagatctcggtttctgctgaagaagaattcaacattgagaaactccagcttgtt 261 Query: 243 gaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgtt 302 || || ||||| ||||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 262 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 321 Query: 303 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 358 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 322 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 377 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaaga 490 |||||||| | ||||||||||||||||| Sbjct: 482 ttgttcagtgtttgcttcggttgaaaga 509
>gb|AY081632.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 876 Score = 143 bits (72), Expect = 8e-31 Identities = 195/236 (82%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaag 182 ||||| || ||||||||||||||||||||| | || |||||||| || || || ||||| Sbjct: 13 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 72 Query: 183 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 242 || ||||||||| || || || || || ||||||||||||||||| || || |||||| Sbjct: 73 gcaaacgagatctcggtttctgctgaagaagaattcaacattgagaaactccagcttgtt 132 Query: 243 gaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgtt 302 || || ||||| ||||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 133 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 192 Query: 303 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 358 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 193 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 248 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaaga 490 |||||||| | ||||||||||||||||| Sbjct: 353 ttgttcagtgtttgcttcggttgaaaga 380
>gb|AY065119.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 1033 Score = 143 bits (72), Expect = 8e-31 Identities = 195/236 (82%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaag 182 ||||| || ||||||||||||||||||||| | || |||||||| || || || ||||| Sbjct: 142 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 201 Query: 183 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 242 || ||||||||| || || || || || ||||||||||||||||| || || |||||| Sbjct: 202 gcaaacgagatctcggtttctgctgaagaagaattcaacattgagaaactccagcttgtt 261 Query: 243 gaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgtt 302 || || ||||| ||||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 262 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 321 Query: 303 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 358 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 322 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 377 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaaga 490 |||||||| | ||||||||||||||||| Sbjct: 482 ttgttcagtgtttgcttcggttgaaaga 509
>gb|AF009338.1|AF009338 Gossypium hirsutum vacuolar H+-ATPase subunit E mRNA, complete cds Length = 989 Score = 141 bits (71), Expect = 3e-30 Identities = 224/275 (81%) Strand = Plus / Plus Query: 105 gccaagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgc 164 ||||| |||| |||| | ||||| |||| ||||||||||||||||||| | ||||||||| Sbjct: 18 gccaaaatgagcgacgctgatgtatccaagcagatccagcagatggtgagattcatccgc 77 Query: 165 caggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacatt 224 ||||| || ||||| |||||| ||||||||| || ||||| || ||||| |||||||| Sbjct: 78 caggaagcggaggaaaaggctaacgagatctctgtttccgctgaagaggagttcaacatc 137 Query: 225 gagaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaa 284 |||||||| ||| | || ||||| ||||| |||||||| || || || || ||| ||| Sbjct: 138 gagaagcttcaattggtggaagcggagaagaagaagattaggcaggagtacgagaagaag 197 Query: 285 gagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgt 344 |||||||| ||||| | || |||||||||||||| || |||||||| ||||| || | Sbjct: 198 gagaagcaagttgaaatccgaaagaaaattgagtattcgatgcagcttaatgcatctagg 257 Query: 345 atcaaagtgcttcaggcccaggatgacctggttaa 379 ||||| || |||||||| || ||||| ||||||| Sbjct: 258 atcaaggtccttcaggctcaagatgatgtggttaa 292
>gb|BT013542.1| Lycopersicon esculentum clone 132262F, mRNA sequence Length = 936 Score = 137 bits (69), Expect = 5e-29 Identities = 204/249 (81%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaag 182 ||||| |||| ||||||||| |||||||| | ||||||||||| || || ||||||||| Sbjct: 104 gatgtgtccaagcagatccatcagatggtcagattcatccgccaagaagcggaggagaag 163 Query: 183 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 242 || ||||| || || ||||| || || |||||||||||||||||| |||| | || Sbjct: 164 gccaatgagatttctgtttccgctgaagaagaattcaacattgagaagttgcagttagtg 223 Query: 243 gaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgtt 302 ||||| ||||| |||||||| |||| ||||| ||||| |||||||| || ||||| ||| Sbjct: 224 gaagcggagaagaagaagattagactggaatacgagcgtaaagagaaacaagttgacgtt 283 Query: 303 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcc 362 || |||||||| |||||||| ||||| || ||||| || || |||||||| ||||| || Sbjct: 284 cgtaagaaaatagagtactccatgcaactcaatgcctctcggatcaaagttcttcaagct 343 Query: 363 caggatgac 371 ||||||||| Sbjct: 344 caggatgac 352
>gb|AF282970.1|AF282970 Lycopersicon esculentum putative vacuolar proton ATPase subunit E mRNA, partial cds Length = 844 Score = 137 bits (69), Expect = 5e-29 Identities = 213/261 (81%) Strand = Plus / Plus Query: 121 ccgatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggaga 180 ||||||| |||| |||||||||||| ||||| || ||||||| ||||| || || || | Sbjct: 1 ccgatgtatccaagcagatccagcaaatggtccgattcatccttcaggaagcggaagaaa 60 Query: 181 aggctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttg 240 | ||| ||||| ||||| || || || || ||||||||||| |||||| |||| || | Sbjct: 61 aagctaatgagatttccgtttctgctgaagaagaattcaacatcgagaagttgcagctag 120 Query: 241 ttgaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatg 300 | ||||| ||||| ||||||||||||||||| || || || |||||||| || || |||| Sbjct: 121 tggaagcagagaagaagaagatcagacaagagtacgaacgcaaagagaaacaagtggatg 180 Query: 301 ttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcagg 360 |||| ||||| ||||||||||| ||||| || ||||| || || |||||||| ||||| | Sbjct: 181 ttcgcaagaagattgagtactccatgcaactcaatgcctctcgaatcaaagttcttcaag 240 Query: 361 cccaggatgacctggttaaca 381 | ||||| ||| ||||||||| Sbjct: 241 ctcaggacgacttggttaaca 261
>gb|AY220098.1| Phaseolus acutifolius vacuolar ATPase subunit E mRNA, partial cds Length = 931 Score = 135 bits (68), Expect = 2e-28 Identities = 197/240 (82%) Strand = Plus / Plus Query: 132 aggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgag 191 ||||| |||||||||||||||||||||||||||||||| || ||||| || || |||| Sbjct: 5 aggcaaatccagcagatggtgcggttcatccgccaggaagcagaggaaaaagccaacgag 64 Query: 192 atctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgttgaagctgag 251 ||||| ||||||||||| ||||||||||| || ||||||||||| | || ||||| || Sbjct: 65 atctctgtctccgccgaagaggaattcaatatcgagaagctgcagttggtcgaagccgaa 124 Query: 252 aaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaa 311 || ||||||||||| ||||| || || || |||||| || || || |||| ||||| Sbjct: 125 aagaagaagatcaggcaagagtacgaacgcaaagagcgccaagtcgaaattcgcaagaag 184 Query: 312 attgagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgac 371 || ||||| || ||||||||||||||||| || || ||||| ||||| || || |||||| Sbjct: 185 atcgagtattcgatgcagctgaatgcttctcgaattaaagttcttcaagctcaagatgac 244
>emb|X92117.1|ATVATPASE A.thaliana mRNA for vacuolar proton ATPase subunit E Length = 949 Score = 135 bits (68), Expect = 2e-28 Identities = 194/236 (82%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaag 182 ||||| || ||||||||||||||||||||| | || |||||||| || || || ||||| Sbjct: 119 gatgtatcgaggcagatccagcagatggtgagatttatccgccaagaagcggaagagaaa 178 Query: 183 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 242 || ||||||||| || | || || || ||||||||||||||||| || || |||||| Sbjct: 179 gcaaacgagatctcggttcctgctgaagaagaattcaacattgagaaactccagcttgtt 238 Query: 243 gaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgtt 302 || || ||||| ||||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 239 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 298 Query: 303 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 358 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 299 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 354 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaaga 490 |||||||| | ||||||||||||||||| Sbjct: 459 ttgttcagtgtttgcttcggttgaaaga 486
>emb|X96785.1|SOVHATP S.oleracea mRNA for vacuolar H(+)-ATPase Length = 1030 Score = 133 bits (67), Expect = 7e-28 Identities = 205/251 (81%) Strand = Plus / Plus Query: 108 aagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccag 167 |||||||| ||||||||||| | |||||||||||||||||| | ||||||||||| Sbjct: 91 aagatgaatgacaccgatgttcagaagcagatccagcagatggttagattcatccgccaa 150 Query: 168 gaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacattgag 227 || || |||||||| ||| ||||||||||||| | || || ||||| ||||| |||||| Sbjct: 151 gaagcggaggagaaagctaacgagatctccgtcgctgctgaagaggagttcaatattgag 210 Query: 228 aagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatatgagcggaaagag 287 ||| |||| | |||||||| ||||| ||||||||||| | ||| || ||||| || ||| Sbjct: 211 aagttgcagttagttgaagcggagaagaagaagatcaggccagagtacgagcgcaaggag 270 Query: 288 aagcaggttgatgttcggaagaaaattgagtactctatgcagctgaatgcttcccgtatc 347 ||||| ||| | ||||| |||||| |||||||| |||||||||||||| || || ||| Sbjct: 271 aagcaagttcaagttcgccggaaaatagagtactccatgcagctgaatgcatctcggatc 330 Query: 348 aaagtgcttca 358 || || ||||| Sbjct: 331 aaggtccttca 341
>emb|BX826893.1|CNS0A2D0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 127 bits (64), Expect = 5e-26 Identities = 193/236 (81%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgccaggaggccgaggagaag 182 ||||| || ||||| ||||||||||||||| | || |||||||| || || || ||||| Sbjct: 102 gatgtatcgaggcaaatccagcagatggtgagatttatccgccaagaagcggaagagaaa 161 Query: 183 gctggcgagatctccgtctccgccgaggaggaattcaacattgagaagctgcaacttgtt 242 || ||||||||| || || || || || |||||||||||| |||| || || |||||| Sbjct: 162 gcgaacgagatctcggtttctgctgaagaagaattcaacatttagaaactccagcttgtt 221 Query: 243 gaagctgagaaaaagaagatcagacaagaatatgagcggaaagagaagcaggttgatgtt 302 || || ||||| ||||||||||| ||||| |||||| ||| |||||||| | ||||||| Sbjct: 222 gaggcggagaagaagaagatcaggcaagattatgagaagaaggagaagcaagctgatgtt 281 Query: 303 cggaagaaaattgagtactctatgcagctgaatgcttcccgtatcaaagtgcttca 358 || ||||| ||||| |||||||||||||| ||||| || | |||||||| ||||| Sbjct: 282 cgcaagaagattgattactctatgcagctaaatgcatcaaggatcaaagttcttca 337 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaaga 490 |||||||| | ||||||||||||||||| Sbjct: 442 ttgttcagtgtttgcttcggttgaaaga 469
>gb|AY106923.1| Zea mays PCO133385 mRNA sequence Length = 1211 Score = 101 bits (51), Expect = 3e-18 Identities = 174/215 (80%) Strand = Plus / Plus Query: 156 ttcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaa 215 ||||||||||||||||||| |||||||| | ||||||| | | |||||| ||||| Sbjct: 252 ttcatccgccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgaggag 311 Query: 216 ttcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatat 275 ||| | || || ||| |||| || || |||||||| || ||||||||||| || |||||| Sbjct: 312 ttccaaatagaaaagttgcagctggtggaagctgaaaagaagaagatcaggcaggaatat 371 Query: 276 gagcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaat 335 || |||||||||||||| |||| | |||||||||||| ||||| |||||||| ||| Sbjct: 372 gaccggaaagagaagcaagttggcatcaagaagaaaattgattactcgatgcagctcaat 431 Query: 336 gcttcccgtatcaaagtgcttcaggcccaggatga 370 |||||| | || ||||| ||||| || |||||||| Sbjct: 432 gcttccagaattaaagtccttcaagctcaggatga 466
>dbj|AK100850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123I11, full insert sequence Length = 1060 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 134 gcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagat 193 |||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| Sbjct: 124 gcagatccagcagatggtcaggttcatcctgcaggaggccgaggagaaagccagcgagat 183 Query: 194 ctccgtctccgccgaggaggaattcaacattgagaagctgca 235 ||| || |||| |||||||| |||||||| ||||||||||| Sbjct: 184 ctcggtggccgcggaggaggagttcaacatagagaagctgca 225
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 211 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaag 270 ||||||||||||||||||| || || |||||||| || ||||| ||||||||||| |||| Sbjct: 44543 aggaattcaacattgagaaactccagcttgttgaggcggagaagaagaagatcaggcaag 44602 Query: 271 aatatgagcggaaagagaagcaggttgatgttcggaagaa 310 | |||||| ||| |||||||| | ||||||||| ||||| Sbjct: 44603 attatgagaagaaggagaagcaagctgatgttcgcaagaa 44642 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgcca 166 ||||| || ||||||||||||||||||||| | || |||||||| Sbjct: 44340 gatgtatcgaggcagatccagcagatggtgagatttatccgcca 44383
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 211 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaag 270 ||||||||||||||||||| || || |||||||| || ||||| ||||||||||| |||| Sbjct: 72076 aggaattcaacattgagaaactccagcttgttgaggcggagaagaagaagatcaggcaag 72135 Query: 271 aatatgagcggaaagagaagcaggttgatgttcggaagaa 310 | |||||| ||| |||||||| | ||||||||| ||||| Sbjct: 72136 attatgagaagaaggagaagcaagctgatgttcgcaagaa 72175 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgcca 166 ||||| || ||||||||||||||||||||| | || |||||||| Sbjct: 71873 gatgtatcgaggcagatccagcagatggtgagatttatccgcca 71916
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 108 aagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccag 167 ||||||||||| | ||||| || | |||||| ||||||||||| ||||||||||| || Sbjct: 11050 aagatgaacgatgcggatgtgtcaaagcagatacagcagatggtccggttcatccggcaa 11109 Query: 168 gaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaattcaacat 223 || || || ||||| || |||||||||| ||||||||||||||||||||||||| Sbjct: 11110 gaagcagaagagaaagcaaacgagatctccatctccgccgaggaggaattcaacat 11165
>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 Length = 74406 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 211 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaag 270 ||||||||||||||||||| || || |||||||| || ||||| ||||||||||| |||| Sbjct: 21279 aggaattcaacattgagaaactccagcttgttgaggcggagaagaagaagatcaggcaag 21220 Query: 271 aatatgagcggaaagagaagcaggttgatgttcggaagaa 310 | |||||| ||| |||||||| | ||||||||| ||||| Sbjct: 21219 attatgagaagaaggagaagcaagctgatgttcgcaagaa 21180 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 123 gatgtctccaggcagatccagcagatggtgcggttcatccgcca 166 ||||| || ||||||||||||||||||||| | || |||||||| Sbjct: 21482 gatgtatcgaggcagatccagcagatggtgagatttatccgcca 21439
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 211 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaag 270 ||||||||||||||||||| |||| ||||||||||| ||||| |||||||| ||||||| Sbjct: 21208 aggaattcaacattgagaaattgcagcttgttgaagcagagaagaagaagattagacaag 21267 Query: 271 aatatgagcggaaagagaagcaggttgatgt 301 | |||||| ||| ||||| ||||| ||||| Sbjct: 21268 agtatgagaagaaggagaaacaggtcgatgt 21298 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 108 aagatgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccag 167 |||||||||||| |||||| |||| ||||||||||||||||| |||| ||||||||| Sbjct: 20889 aagatgaacgacgccgatgcttccatccagatccagcagatggttaggtttatccgccag 20948 Query: 168 gaggccgaggagaaggctggcgagatctccgtctcc 203 || ||||| || |||||| |||||||||| ||||| Sbjct: 20949 gaagccgaagaaaaggctaacgagatctccatctcc 20984
>ref|NM_111690.1| Arabidopsis thaliana VHA-E2; hydrogen-exporting ATPase, phosphorylative mechanism / hydrogen-transporting ATP synthase, rotational mechanism / hydro> AT3G08560 (VHA-E2) mRNA, complete cds Length = 708 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 134 gcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagat 193 |||||| ||||||||||| ||||||||||| || || || || ||||| || |||||| Sbjct: 24 gcagatacagcagatggtccggttcatccggcaagaagcagaagagaaagcaaacgagat 83 Query: 194 ctccgtctccgccgaggaggaattcaacat 223 |||| ||||||||||||||||||||||||| Sbjct: 84 ctccatctccgccgaggaggaattcaacat 113
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 134 gcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagat 193 |||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| Sbjct: 23488611 gcagatccagcagatggtcaggttcatcctgcaggaggccgaggagaaagccagcgagat 23488670 Query: 194 ctccgtctccgccgaggagg 213 ||| || |||| ||||||| Sbjct: 23488671 ctcggtggccgcggaggagg 23488690 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 1669785 cgtcagatccgccgccgccg 1669804
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 211 aggaattcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaag 270 |||||||||| || |||||| | || | ||||||||||| || ||||||||| | |||| Sbjct: 23437 aggaattcaatatcgagaagttacagttggttgaagctgataagaagaagatccgtcaag 23378 Query: 271 aatatgagcggaaagagaagcaggttgatgttcggaagaa 310 | |||||||| |||||||| || ||||||||||| ||||| Sbjct: 23377 agtatgagcgcaaagagaaacaagttgatgttcgtaagaa 23338 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 111 atgaacgacaccgatgtctccaggcagatccagcagatggtgcggttcatccgccaggag 170 ||||||||| | |||||||||| ||| |||||||||||||||||||| ||||| || || Sbjct: 23667 atgaacgacgcagatgtctccaagcaaatccagcagatggtgcggtttatccgtcaagaa 23608 Query: 171 gccgaggagaa 181 ||||| ||||| Sbjct: 23607 gccgaagagaa 23597 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 315 gagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacctg 374 ||||||||||||||| |||||||||| || | || || ||||| ||||| |||||| || Sbjct: 22498 gagtactctatgcagttgaatgcttcacggttgaaggttcttcaagcccaagatgacgtg 22439 Query: 375 gttaacaaaatgaaagag 392 ||||| |||||||||||| Sbjct: 22438 gttaataaaatgaaagag 22421
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 134 gcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggctggcgagat 193 |||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| Sbjct: 24335 gcagatccagcagatggtcaggttcatcctgcaggaggccgaggagaaagccagcgagat 24394 Query: 194 ctccgtctccgccgaggagg 213 ||| || |||| ||||||| Sbjct: 24395 ctcggtggccgcggaggagg 24414
>emb|BX827529.1|CNS0A2RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 770 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 260 gatcagacaagaatatgagcggaaagagaagcaggttgatgttcggaagaaaattgagta 319 |||||| ||||| |||||| ||| |||||||| | ||||||||| ||||| ||||| || Sbjct: 1 gatcaggcaagattatgagaagaaggagaagcaagctgatgttcgcaagaagattgatta 60 Query: 320 ctctatgcagctgaatgcttcccgtatcaaagtgcttca 358 |||||||||||| ||||| || | |||||||| ||||| Sbjct: 61 ctctatgcagctaaatgcatcaaggatcaaagttcttca 99 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaaga 490 |||||||| | ||||||||||||||||| Sbjct: 204 ttgttcagtgtttgcttcggttgaaaga 231
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence Length = 124828 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 315 gagtactctatgcagctgaatgcttcccgtatcaaagtgcttcaggcccaggatgacctg 374 ||||||||||||||| |||||||||| || | || || ||||| ||||| |||||| || Sbjct: 648 gagtactctatgcagttgaatgcttcacggttgaaggttcttcaagcccaagatgacgtg 707 Query: 375 gttaacaaaatgaaagag 392 ||||| |||||||||||| Sbjct: 708 gttaataaaatgaaagag 725
>ref|NM_188514.1| Oryza sativa (japonica cultivar-group), Ozsa8183 predicted mRNA Length = 693 Score = 56.0 bits (28), Expect = 1e-04 Identities = 148/188 (78%) Strand = Plus / Plus Query: 156 ttcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaa 215 ||||||||||||||||||| |||||||| | ||||||| | | |||||| |||||| Sbjct: 46 ttcatccgccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgaggaa 105 Query: 216 ttcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatat 275 || | || ||||| || || || || |||||||| || |||| |||||| |||| | Sbjct: 106 tttcaaatcgagaaactacagctggtggaagctgaaaagaagaggatcaggttggaattt 165 Query: 276 gagcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaat 335 || ||||| |||||||| | |||| | |||||||||||| ||||| | |||||| ||| Sbjct: 166 gaacggaacgagaagcaaggtgatatcaagaagaaaattgaatactcaaagcagctcaat 225 Query: 336 gcttcccg 343 |||||||| Sbjct: 226 gcttcccg 233 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaagagccagctgt 499 |||||||| ||||||| || ||||| ||||||||||| Sbjct: 353 ttgttcagagcttgctgcgtttgaaggagccagctgt 389
>dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P14, full insert sequence Length = 1162 Score = 56.0 bits (28), Expect = 1e-04 Identities = 148/188 (78%) Strand = Plus / Plus Query: 156 ttcatccgccaggaggccgaggagaaggctggcgagatctccgtctccgccgaggaggaa 215 ||||||||||||||||||| |||||||| | ||||||| | | |||||| |||||| Sbjct: 170 ttcatccgccaggaggccgtcgagaaggccgccgagatcgaggccgccgccgccgaggaa 229 Query: 216 ttcaacattgagaagctgcaacttgttgaagctgagaaaaagaagatcagacaagaatat 275 || | || ||||| || || || || |||||||| || |||| |||||| |||| | Sbjct: 230 tttcaaatcgagaaactacagctggtggaagctgaaaagaagaggatcaggttggaattt 289 Query: 276 gagcggaaagagaagcaggttgatgttcggaagaaaattgagtactctatgcagctgaat 335 || ||||| |||||||| | |||| | |||||||||||| ||||| | |||||| ||| Sbjct: 290 gaacggaacgagaagcaaggtgatatcaagaagaaaattgaatactcaaagcagctcaat 349 Query: 336 gcttcccg 343 |||||||| Sbjct: 350 gcttcccg 357 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaagagccagctgt 499 |||||||| ||||||| || ||||| ||||||||||| Sbjct: 477 ttgttcagagcttgctgcgtttgaaggagccagctgt 513
>ref|NM_001012316.1| Danio rerio ribosomal protein S24 (rps24), transcript variant 1, mRNA Length = 533 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 gccgacgccaagatgaacgacac 121 ||||||||||||||||||||||| Sbjct: 22 gccgacgccaagatgaacgacac 44
>gb|BC081494.1| Danio rerio ribosomal protein S24, transcript variant 1, mRNA (cDNA clone MGC:103596 IMAGE:7247764), complete cds Length = 533 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 gccgacgccaagatgaacgacac 121 ||||||||||||||||||||||| Sbjct: 22 gccgacgccaagatgaacgacac 44
>ref|NM_169073.1| Drosophila melanogaster Vacuolar H+-ATPase 26kD E subunit CG1088-RA, transcript variant A (Vha26), mRNA Length = 2276 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 342 gccgaggaggagttcaacattgagaag 368
>ref|NM_079513.2| Drosophila melanogaster Vacuolar H+-ATPase 26kD E subunit CG1088-RB, transcript variant B (Vha26), mRNA Length = 2211 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 277 gccgaggaggagttcaacattgagaag 303
>ref|XM_684875.1| PREDICTED: Danio rerio similar to Ribosomal protein S24, isoform 1 (LOC573098), mRNA Length = 506 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 gccgacgccaagatgaacgacac 121 ||||||||||||||||||||||| Sbjct: 32 gccgacgccaagatgaacgacac 54
>gb|BC094973.1| Danio rerio ribosomal protein S24, mRNA (cDNA clone MGC:109740 IMAGE:7244009), complete cds Length = 532 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 gccgacgccaagatgaacgacac 121 ||||||||||||||||||||||| Sbjct: 22 gccgacgccaagatgaacgacac 44
>gb|AC009538.4|AC009538 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone BACR24O24, complete sequence Length = 173927 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 136961 gccgaggaggagttcaacattgagaag 136987
>gb|AC009346.5|AC009346 Drosophila melanogaster, chromosome 3R, region 83A-83B, BAC clone BACR03P13, complete sequence Length = 168448 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 21951 gccgaggaggagttcaacattgagaag 21977
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 156 ttcatccgccaggaggccgaggagaaggctggcgagatc 194 ||||||||||||||||||| |||||||| | ||||||| Sbjct: 54355 ttcatccgccaggaggccgtcgagaaggccgccgagatc 54317
>gb|AF145618.1|AF145618 Drosophila melanogaster clone GH03683 BcDNA.GH03683 (BcDNA.GH03683) mRNA, complete cds Length = 2232 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 288 gccgaggaggagttcaacattgagaag 314
>gb|AE003602.4| Drosophila melanogaster chromosome 3R, section 6 of 118 of the complete sequence Length = 326091 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 182022 gccgaggaggagttcaacattgagaag 182048
>gb|U38951.1|DMU38951 Drosophila melanogaster vacuolar ATPase subunit E (vha26) gene, complete cds Length = 3076 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 908 gccgaggaggagttcaacattgagaag 934
>gb|U38198.1|DMU38198 Drosophila melanogaster V-ATPase subunit E (vha26) mRNA, complete cds Length = 2096 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 177 gccgaggaggagttcaacattgagaag 203
>emb|AJ223042.1|DME223042 Drosophila melanogaster noisette gene Length = 3578 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 204 gccgaggaggaattcaacattgagaag 230 ||||||||||| ||||||||||||||| Sbjct: 102 gccgaggaggagttcaacattgagaag 76
>gb|AY423012.1| Danio rerio ribosomal protein S24 (RPS24) mRNA, complete cds Length = 1571 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 ccgacgccaagatgaacgacac 121 |||||||||||||||||||||| Sbjct: 1 ccgacgccaagatgaacgacac 22
>ref|NM_201216.1| Danio rerio ribosomal protein S24 (rps24), transcript variant 2, mRNA Length = 1571 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 ccgacgccaagatgaacgacac 121 |||||||||||||||||||||| Sbjct: 1 ccgacgccaagatgaacgacac 22
>gb|AC117227.3| Mus musculus BAC clone RP23-380C5 from 13, complete sequence Length = 190816 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 ttgagtactctatgcagctgaa 334 |||||||||||||||||||||| Sbjct: 118927 ttgagtactctatgcagctgaa 118906
>gb|AF045642.2| Caenorhabditis elegans cosmid C17H12, complete sequence Length = 47345 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaa 229 |||||||| ||||||||||||||||| Sbjct: 13117 gccgaggaagaattcaacattgagaa 13142
>ref|NM_068639.2| Caenorhabditis elegans C17H12.14 (ATPase) mRNA, complete cds Length = 1245 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 gccgaggaggaattcaacattgagaa 229 |||||||| ||||||||||||||||| Sbjct: 126 gccgaggaagaattcaacattgagaa 151
>gb|AC096628.14| Mus musculus strain C57BL/6J chromosome 13 clone rp23-81n4, complete sequence Length = 194818 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 313 ttgagtactctatgcagctgaa 334 |||||||||||||||||||||| Sbjct: 120891 ttgagtactctatgcagctgaa 120912
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 cgccgccgccgacgccaagat 112 ||||||||||||||||||||| Sbjct: 775582 cgccgccgccgacgccaagat 775602
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gaagatcagacaagaatatga 277 ||||||||||||||||||||| Sbjct: 303006 gaagatcagacaagaatatga 303026
>ref|XM_445921.1| Candida glabrata CBS138, CAGL0E05346g partial mRNA Length = 702 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 156 ttcatccgccaggaggccgaggagaaggc 184 |||||||| ||||||||||||||||||| Sbjct: 64 ttcatccggaaggaggccgaggagaaggc 92
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 156 ttcatccgccaggaggccgaggagaaggc 184 |||||||| ||||||||||||||||||| Sbjct: 521821 ttcatccggaaggaggccgaggagaaggc 521849
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 cgccgccgccgacgccaagat 112 ||||||||||||||||||||| Sbjct: 89335 cgccgccgccgacgccaagat 89355
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 cgccgccgccgacgccaagat 112 ||||||||||||||||||||| Sbjct: 108377 cgccgccgccgacgccaagat 108397
>gb|AF521878.1| Streptomyces narbonensis desosamine biosynthetic gene cluster, partial sequence Length = 17665 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 ggttcatccgccaggaggccg 174 ||||||||||||||||||||| Sbjct: 16068 ggttcatccgccaggaggccg 16048
>dbj|AB183875.1| Cyanophora paradoxa CpFtsZ-cy mRNA for plastid division protein FtsZ, complete cds Length = 1517 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 ccgccgccgccgacgccaaga 111 ||||||||||||||||||||| Sbjct: 398 ccgccgccgccgacgccaaga 378
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 tccgccgccgccgacgccaagatga 114 |||||||||||||||||||| |||| Sbjct: 1109331 tccgccgccgccgacgccaacatga 1109307
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 atgacctggttaacaaaatga 387 ||||||||||||||||||||| Sbjct: 94067 atgacctggttaacaaaatga 94047
>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence Length = 122302 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gccctccctcctcctgtcgtg 26 ||||||||||||||||||||| Sbjct: 103392 gccctccctcctcctgtcgtg 103372
>gb|AF079139.1|AF079139 Streptomyces venezuelae pikCD operon, complete sequence Length = 4342 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 ggttcatccgccaggaggccg 174 ||||||||||||||||||||| Sbjct: 2798 ggttcatccgccaggaggccg 2778
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 cgccgccgccgacgccaagat 112 ||||||||||||||||||||| Sbjct: 4613867 cgccgccgccgacgccaagat 4613887
>dbj|D11038.1|TBAPS3COI Thermophilic bacterium gene for cytochrome oxidase subunit I (COI), complete cds Length = 1844 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 tccgccgccgccgacgccaagatga 114 |||||||||||||||||||| |||| Sbjct: 1310 tccgccgccgccgacgccaacatga 1286
>dbj|D13955.1|TBACYC Thermophilic bacterium PS3, caaA, caaB, caaC, caaD genes coding for cytochrome c oxidase subunit 1-4, (EC 1.9.3.1.) Length = 4736 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 tccgccgccgccgacgccaagatga 114 |||||||||||||||||||| |||| Sbjct: 2888 tccgccgccgccgacgccaacatga 2864
>ref|XM_525250.1| PREDICTED: Pan troglodytes similar to KIAA0552 protein (LOC469865), mRNA Length = 2733 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agaaggctggcgagatctcc 197 |||||||||||||||||||| Sbjct: 2360 agaaggctggcgagatctcc 2379
>ref|XM_483309.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 aggaggccgaggagaaggctggcg 189 ||||| |||||||||||||||||| Sbjct: 74 aggagaccgaggagaaggctggcg 51
>ref|XM_468640.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ccgccgccgccgacgccaag 110 |||||||||||||||||||| Sbjct: 541 ccgccgccgccgacgccaag 560
>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map C12819S, complete sequence Length = 113266 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgccgccgccgacgccaag 110 |||||||||||||||||||| Sbjct: 25259 ccgccgccgccgacgccaag 25240
>gb|U23139.1| Caenorhabditis elegans cosmid F13H8, complete sequence Length = 37794 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tcaatatcagcagcaaccac 431 |||||||||||||||||||| Sbjct: 2372 tcaatatcagcagcaaccac 2353
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 121945 cgtcagatccgccgccgccg 121964
>ref|XM_362267.1| Magnaporthe grisea 70-15 hypothetical protein (MG04712.4) partial cds Length = 1746 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 cctcaatatcagcagcaaccacca 433 |||||||||||||| ||||||||| Sbjct: 1084 cctcaatatcagcaacaaccacca 1107
>ref|XM_460952.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F14685g) partial mRNA Length = 3144 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 aatgaatatgcatcaaaagc 580 |||||||||||||||||||| Sbjct: 1789 aatgaatatgcatcaaaagc 1808
>gb|BC067071.1| Mus musculus RIKEN cDNA 4930519N13 gene, mRNA (cDNA clone MGC:91335 IMAGE:30615484), complete cds Length = 4222 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcaggcccaggatgacct 373 |||||||||||||||||||| Sbjct: 2192 cttcaggcccaggatgacct 2173
>ref|NM_172239.1| Homo sapiens REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1 (REXO1L1), mRNA Length = 6609 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 502 caggaggccgaggagaaggc 521
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgccgccgccgacgccaag 110 |||||||||||||||||||| Sbjct: 16787409 ccgccgccgccgacgccaag 16787390
>gb|AY198279.1| Peronospora alsinearum internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 797 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aatatcagcagcaaccacca 433 |||||||||||||||||||| Sbjct: 77 aatatcagcagcaaccacca 58
>ref|XM_386878.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06702.1) partial mRNA Length = 744 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ctggcgagatctccgtctcc 203 |||||||||||||||||||| Sbjct: 221 ctggcgagatctccgtctcc 240
>gb|AC122051.2| Mus musculus BAC clone RP24-459B17 from 18, complete sequence Length = 177747 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 ttaacaaaatgaaagaggatgcaa 399 |||||||||| ||||||||||||| Sbjct: 135955 ttaacaaaataaaagaggatgcaa 135978
>emb|AL357034.18| Human DNA sequence from clone RP11-560I21 on chromosome 6 Contains the 3' end of the STX7 gene for syntaxin 7, the 5' end of the MOXD1 gene for monooxygenase DBH-like 1 and two CpG islands, complete sequence Length = 127703 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 agaaaattgagtactctatgcagctgaa 334 |||||||||||| ||||||||| ||||| Sbjct: 62930 agaaaattgagtcctctatgcaactgaa 62903
>emb|AL121891.22|HS1187M17 Human DNA sequence from clone RP5-1187M17 on chromosome 20 Contains the 5' end of the AVP gene for arginine vasopressin (neurophysin II), the gene KIAA0860 for a likely ortholog of mouse ubiquitin conjugating enzyme a novel gene 7 interacting protein 5, a novel gene (FLJ3149), a novel gene (KIAA0552), the C20orf116 gene, the 5' end of the ITPA gene for inosine triphosphatase (nucleoside triphosphate pyrophosphatase), a novel transcript and nine CpG islands, complete sequence Length = 125856 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 agaaggctggcgagatctcc 197 |||||||||||||||||||| Sbjct: 80251 agaaggctggcgagatctcc 80232
>gb|AC093331.9| Homo sapiens chromosome 8, clone RP11-59O2, complete sequence Length = 170974 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 169304 caggaggccgaggagaaggc 169285 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 162467 caggaggccgaggagaaggc 162448 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 150559 caggaggccgaggagaaggc 150540
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 aatctgtactgcattcagcaaaga 561 ||||| |||||||||||||||||| Sbjct: 2828558 aatctatactgcattcagcaaaga 2828535
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 aatgaatatgcatcaaaagc 580 |||||||||||||||||||| Sbjct: 1177233 aatgaatatgcatcaaaagc 1177214
>ref|NM_014731.2| Homo sapiens ProSAPiP1 protein (ProSAPiP1), mRNA Length = 5247 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agaaggctggcgagatctcc 197 |||||||||||||||||||| Sbjct: 2729 agaaggctggcgagatctcc 2748
>gb|BC038860.1| Homo sapiens ProSAPiP1 protein, mRNA (cDNA clone MGC:33747 IMAGE:5260571), complete cds Length = 4061 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agaaggctggcgagatctcc 197 |||||||||||||||||||| Sbjct: 1529 agaaggctggcgagatctcc 1548
>emb|CR762461.7| Zebrafish DNA sequence from clone DKEY-32H6 in linkage group 13, complete sequence Length = 86411 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 aaaatgaaagaggatgcaatgaag 404 |||||||||||||||||| ||||| Sbjct: 77732 aaaatgaaagaggatgcattgaag 77755
>emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 in linkage group 13, complete sequence Length = 205873 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 aaaatgaaagaggatgcaatgaag 404 |||||||||||||||||| ||||| Sbjct: 70613 aaaatgaaagaggatgcattgaag 70636
>gb|AF402832.1| Ictalurus punctatus 40S ribosomal protein S24 mRNA, complete cds Length = 481 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgacgccaagatgaacgaca 120 |||||||||||||||||||| Sbjct: 10 cgacgccaagatgaacgaca 29
>emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on chromosome 2, complete sequence Length = 236619 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cttcaggcccaggatgacct 373 |||||||||||||||||||| Sbjct: 119495 cttcaggcccaggatgacct 119514
>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194589 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ccgccgccgacgccaagatgaacg 117 ||||||||||| |||||||||||| Sbjct: 159940 ccgccgccgactccaagatgaacg 159917
>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156142 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ccgccgccgacgccaagatgaacg 117 ||||||||||| |||||||||||| Sbjct: 84445 ccgccgccgactccaagatgaacg 84468
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 71607 cgtcagatccgccgccgccg 71588
>ref|NM_168179.1| Drosophila melanogaster CG32394-PA (CG32394) mRNA, complete cds Length = 8274 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ccgccgccgacgccaagatgaacg 117 ||||||||||| |||||||||||| Sbjct: 1315 ccgccgccgactccaagatgaacg 1338
>gb|AY075420.1| Drosophila melanogaster LD41761 full length cDNA Length = 1511 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ccgccgccgacgccaagatgaacg 117 ||||||||||| |||||||||||| Sbjct: 1315 ccgccgccgactccaagatgaacg 1338
>ref|XM_926387.1| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC653185), mRNA Length = 1824 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 742 caggaggccgaggagaaggc 761
>ref|XM_496985.2| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC441363), mRNA Length = 6768 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 664 caggaggccgaggagaaggc 683
>ref|XM_376784.3| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC401467), mRNA Length = 6912 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 946 caggaggccgaggagaaggc 965
>ref|XM_496984.2| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC441362), mRNA Length = 6774 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 670 caggaggccgaggagaaggc 689
>ref|XM_496983.2| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC441361), mRNA Length = 7142 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 946 caggaggccgaggagaaggc 965
>ref|XM_496981.2| PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC441359), mRNA Length = 6913 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 946 caggaggccgaggagaaggc 965
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atccgccgccgccgacgcca 108 |||||||||||||||||||| Sbjct: 3737073 atccgccgccgccgacgcca 3737092
>gb|AC018902.8| Homo sapiens chromosome 15 clone RP11-327C2 map 15Q21.2, complete sequence Length = 157226 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 gaattcaacattgagaagctgcaa 236 |||||||||||| ||||||||||| Sbjct: 8349 gaattcaacattaagaagctgcaa 8372
>gb|AC010674.11| Homo sapiens chromosome 15 clone RP11-430B1 map 15q21.1, complete sequence Length = 214415 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 gaattcaacattgagaagctgcaa 236 |||||||||||| ||||||||||| Sbjct: 185569 gaattcaacattaagaagctgcaa 185592
>ref|NM_062850.2| Caenorhabditis elegans F13H8.5 (F13H8.5) mRNA, complete cds Length = 1808 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 tcaatatcagcagcaaccac 431 |||||||||||||||||||| Sbjct: 371 tcaatatcagcagcaaccac 390
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tcgtcagatccgccgccgcc 101 |||||||||||||||||||| Sbjct: 4603796 tcgtcagatccgccgccgcc 4603815
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 17603024 cgtcagatccgccgccgccg 17603043
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 tcagatccgccgccgccgacgcca 108 |||||||||||||||||| ||||| Sbjct: 1001114 tcagatccgccgccgccgtcgcca 1001137
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 aggaggccgaggagaaggctggcg 189 ||||| |||||||||||||||||| Sbjct: 25384973 aggagaccgaggagaaggctggcg 25384996
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgccgccgccgacgccaag 110 |||||||||||||||||||| Sbjct: 16781042 ccgccgccgccgacgccaag 16781023
>emb|BX826920.1|CNS0A38B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 731 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttgttcagggcttgcttcggttgaaaga 490 |||||||| | ||||||||||||||||| Sbjct: 139 ttgttcagtgtttgcttcggttgaaaga 166
>gb|AF323785.1|AF323785 Oryza sativa subsp. indica KNOX class homeodomain protein (Oskn2) gene, partial cds Length = 3589 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 2855 cgtcagatccgccgccgccg 2836
>gb|AC084683.1|CBRG47P01 Caenorhabditis briggsae cosmid G47P01, complete sequence Length = 37515 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 gaagctgagaaaaagaagatcaga 266 ||||| |||||||||||||||||| Sbjct: 33425 gaagcggagaaaaagaagatcaga 33402
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ccgccaggaggccgaggaga 180 |||||||||||||||||||| Sbjct: 3270931 ccgccaggaggccgaggaga 3270912
>gb|AF279874.3| Homo sapiens chromosome 8 clone CTD-2351C9 map q21-q23, complete sequence Length = 109808 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 99793 caggaggccgaggagaaggc 99812 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 87602 caggaggccgaggagaaggc 87621 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 75412 caggaggccgaggagaaggc 75431 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 63498 caggaggccgaggagaaggc 63517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 51308 caggaggccgaggagaaggc 51327
>ref|XM_230778.3| PREDICTED: Rattus norvegicus similar to KIAA0980 protein (predicted) (LOC311529), mRNA Length = 5358 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcaggcccaggatgacct 373 |||||||||||||||||||| Sbjct: 3165 cttcaggcccaggatgacct 3146
>gb|AF495523.1| Homo sapiens exonuclease GOR mRNA, complete cds Length = 6609 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 caggaggccgaggagaaggc 184 |||||||||||||||||||| Sbjct: 502 caggaggccgaggagaaggc 521
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 tcagatccgccgccgccgacgcca 108 |||||||||||||||||| ||||| Sbjct: 165241 tcagatccgccgccgccgtcgcca 165264
>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1134_E08 Length = 153002 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 tcagatccgccgccgccgacgcca 108 |||||||||||||||||| ||||| Sbjct: 38807 tcagatccgccgccgccgtcgcca 38830
>dbj|AB011124.1| Homo sapiens mRNA for KIAA0552 protein, partial cds Length = 5257 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 agaaggctggcgagatctcc 197 |||||||||||||||||||| Sbjct: 2739 agaaggctggcgagatctcc 2758
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 aggaggccgaggagaaggctggcg 189 ||||| |||||||||||||||||| Sbjct: 16289 aggagaccgaggagaaggctggcg 16312
>dbj|AK111878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046I12, full insert sequence Length = 1785 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 656 cgtcagatccgccgccgccg 637
>gb|AF050180.1|AF050180 Oryza sativa strain Indica IR58 KNOX class homeodomain protein (Oskn2) mRNA, complete cds Length = 1521 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 471 cgtcagatccgccgccgccg 452
>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete sequence Length = 274289 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ccgccgccgacgccaagatgaacg 117 ||||||||||| |||||||||||| Sbjct: 87528 ccgccgccgactccaagatgaacg 87505
>emb|AL355835.3|CNS05TCP Human chromosome 14 DNA sequence BAC R-196N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172374 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 caggatgacctggttaacaaaatg 386 ||||||| |||||||||||||||| Sbjct: 76267 caggatgtcctggttaacaaaatg 76244
>dbj|AP003783.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-598K3, complete sequence Length = 172763 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cttgttgaagctgagaaaaa 256 |||||||||||||||||||| Sbjct: 109601 cttgttgaagctgagaaaaa 109582
>emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-96D24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184692 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 caggatgacctggttaacaaaatg 386 ||||||| |||||||||||||||| Sbjct: 112422 caggatgtcctggttaacaaaatg 112399
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 17612064 cgtcagatccgccgccgccg 17612083
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tcgtcagatccgccgccgcc 101 |||||||||||||||||||| Sbjct: 4603777 tcgtcagatccgccgccgcc 4603796
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcgtcagatccgccgccgcc 101 |||||||||||||||||||| Sbjct: 982 tcgtcagatccgccgccgcc 963
>ref|NM_207204.1| Mus musculus RIKEN cDNA 4930519N13 gene (4930519N13Rik), mRNA Length = 4222 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cttcaggcccaggatgacct 373 |||||||||||||||||||| Sbjct: 2192 cttcaggcccaggatgacct 2173
>dbj|AB028885.1| Oryza sativa mRNA for knotted1-type homeobox protein OSH71, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 451 cgtcagatccgccgccgccg 432
>dbj|AB007624.1| Oryza sativa (japonica cultivar-group) HOS9 mRNA, partial cds Length = 1346 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtcagatccgccgccgccg 102 |||||||||||||||||||| Sbjct: 217 cgtcagatccgccgccgccg 198 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,968,801 Number of Sequences: 3902068 Number of extensions: 6968801 Number of successful extensions: 161998 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 159801 Number of HSP's gapped (non-prelim): 2180 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
