ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2p22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, co... 527 e-146
2gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 48 0.035
3gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, part... 48 0.035
4gb|AY110047.1| Zea mays CL878_1 mRNA sequence 46 0.14
5ref|XM_470991.1| Oryza sativa (japonica cultivar-group), predic... 44 0.55
6emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on ch... 44 0.55
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
8dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 44 0.55
9dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.55
10gb|AY110563.1| Zea mays CL897_1 mRNA sequence 44 0.55
11emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 44 0.55
12gb|AY688678.1| Mus musculus plexin D1 (Plxnd1) mRNA, complete cds 42 2.2
13ref|XM_953325.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.2
14ref|XM_327702.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.2
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.2
16emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chro... 42 2.2
17gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, co... 42 2.2
18ref|NM_026376.1| Mus musculus plexin D1 (Plxnd1), mRNA 42 2.2
19dbj|AK147513.1| Mus musculus cDNA, RIKEN full-length enriched li... 42 2.2
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
21dbj|AK129175.1| Mus musculus mRNA for mKIAA0620 protein 42 2.2
22gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.2
23gb|AC139761.4| Mus musculus BAC clone RP23-223C23 from 6, comple... 42 2.2
24gb|AE010354.1| Methanopyrus kandleri AV19 section 53 of 157 of t... 40 8.6
25ref|XM_479798.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
26ref|XM_466764.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
27ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
28ref|NM_001024510.1| Bos taurus coronin, actin binding protein, 1... 40 8.6
29gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.6
30ref|XM_545531.2| PREDICTED: Canis familiaris similar to Wiskott-... 40 8.6
31ref|XM_533732.2| PREDICTED: Canis familiaris similar to plexin D... 40 8.6
32ref|XM_571678.1| Cryptococcus neoformans var. neoformans JEC21 4... 40 8.6
33ref|XM_808517.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.6
34emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 40 8.6
35gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, co... 40 8.6
36gb|BC030202.1| Homo sapiens, clone IMAGE:5200695, mRNA 40 8.6
37gb|BC103376.1| Bos taurus coronin, actin binding protein, 1B, mR... 40 8.6
38gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 8.6
39dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.6
43dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
44dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
45dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
46dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
47dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
48gb|BT021806.1| Bos taurus coronin, actin binding protein, 1B (CO... 40 8.6
49dbj|AK100696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
50gb|AF184956.1|AF184956 Bacillus subtilis mycosubtilin operon, co... 40 8.6
51emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 8.6
52dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
53gb|AY110841.1| Zea mays CL908_1 mRNA sequence 40 8.6
54gb|AY944523.1| Unidentified soil organism clone XIX-33 from Aust... 40 8.6
55dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 8.6 
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds
          Length = 1260

 Score =  527 bits (266), Expect = e-146
 Identities = 386/426 (90%)
 Strand = Plus / Plus

                                                                       
Query: 179 ggtggagccggtgctggtggtggtctcatcactactttggccggagatgtcgtggaaggg 238
           ||||||||||||| |||||||||||||||||||||||| || |||||||| || || |||
Sbjct: 367 ggtggagccggtgatggtggtggtctcatcactactttagctggagatgttgtcgagggg 426

                                                                       
Query: 239 gtggtatcatccaagaacactatcgaggggggcggtaatttgacgatgtccacctccgac 298
           | || ||||||||||||| | ||||||| ||   |||||||||||||| |  |||| |||
Sbjct: 427 gcggcatcatccaagaacgccatcgaggaggatcgtaatttgacgatgactgcctctgac 486

                                                                       
Query: 299 cctcctcggcagtttgactggagggagcatggcgctgtcacgcctgcaaagcaacaaggg 358
           ||||| |||||||| ||||||||||| ||||| |  ||||||||||| ||||||||||| 
Sbjct: 487 cctccccggcagttcgactggagggaacatggtgtcgtcacgcctgctaagcaacaagga 546

                                                                       
Query: 359 gcatgcggatgctgctgggcgtttgctgcggcggcgacggtggagagcttgaacaagata 418
           ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 547 gcatgtggatgctgctgggcatttgctgcagcggcgacggtggagagcttgaacaagata 606

                                                                       
Query: 419 aatggcggggagctggtggacctgtcggtgcaagagctggtggactgcagcacgggtgtg 478
           ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 607 aatggcggggagctggttgacctgtccgtgcaggagctggtggactgcagcacgggcgtg 666

                                                                       
Query: 479 ttcagctcgccgtgcggctacgggtggcccaagagcgcactccagtggatcaaatcaaaa 538
           ||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 667 ttcagctcgccatgcggctacgggtggcccaagagcgcactcgcatggatcaaatcaaaa 726

                                                                       
Query: 539 ggtggcctcctcacggaggccgagtacccctacgtggccaagcgaggcagatgcacggtg 598
           || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 727 gggggcctcctcacggaggccgagtacccctacatggccaagcgaggcagatgcgcggtg 786

                 
Query: 599 cacgac 604
           ||||||
Sbjct: 787 cacgac 792



 Score =  220 bits (111), Expect = 4e-54
 Identities = 163/178 (91%), Gaps = 2/178 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   gcatggccggacgtatccgagtgccgccganaagctgcggcggtttgaggcgtaccgtcg 66
           ||||||||||||||| |  |||||||| || ||| ||||||||||||||| |||||||||
Sbjct: 183 gcatggccggacgtaccatagtgccgctgagaag-tgcggcggtttgaggtgtaccgtcg 241

                                                                       
Query: 67  caacgtggacctcatcgacgcctccaacagggacgccgagagg-ctgggctatgagctcg 125
           ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 242 caacgtggacctcatcgacgcctccaacagggacgccgagaggcctcggctatgagctcg 301

                                                                     
Query: 126 gtgagaacgagttcaccgaccttaccaacgaggagttcatgacacggtatatcggtgg 183
           | |||||||||||||||||||| || ||||||||||||||| | |||||| |||||||
Sbjct: 302 gcgagaacgagttcaccgacctcactaacgaggagttcatggcgcggtatgtcggtgg 359
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 465     gcagcacgggtgtgttcagctcgc 488
               ||||||||||||||||||||||||
Sbjct: 3667548 gcagcacgggtgtgttcagctcgc 3667525
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>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence
          Length = 268433

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 119    gagctcggtgagaacgagttcaccgaccttaccaacgaggagttcatg 166
              |||||||||||||  |||| ||||||||| |||| ||| |||||||||
Sbjct: 152275 gagctcggtgagacggagtacaccgacctcaccaccgacgagttcatg 152322
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>gb|AY110047.1| Zea mays CL878_1 mRNA sequence
          Length = 1403

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 424 cggggagctggtggacctgtcggtgcaagagctggtggactgc 466
           |||| ||||||||  |||||||| ||| |||||||||||||||
Sbjct: 584 cgggaagctggtgtccctgtcggagcaggagctggtggactgc 626
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>ref|XM_470991.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1152

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 440 ctgtcggtgcaagagctggtggactg 465
           ||||||| ||||||||||||||||||
Sbjct: 619 ctgtcggagcaagagctggtggactg 644



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 136 gttcaccgaccttaccaacgaggagttc 163
           |||||||||||| ||| |||||||||||
Sbjct: 312 gttcaccgacctcacccacgaggagttc 339
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>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23,
              complete sequence
          Length = 190837

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 317    tggagggagcatggcgctgtca 338
              ||||||||||||||||||||||
Sbjct: 185682 tggagggagcatggcgctgtca 185661
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 440    ctgtcggtgcaagagctggtggactg 465
              ||||||| ||||||||||||||||||
Sbjct: 462410 ctgtcggagcaagagctggtggactg 462385



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 136    gttcaccgaccttaccaacgaggagttc 163
              |||||||||||| ||| |||||||||||
Sbjct: 463088 gttcaccgacctcacccacgaggagttc 463061
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 182     ggagccggtgctggtggtggtc 203
               ||||||||||||||||||||||
Sbjct: 2310159 ggagccggtgctggtggtggtc 2310180
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>dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C02, full
           insert sequence
          Length = 1377

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 440 ctgtcggtgcaagagctggtggactg 465
           ||||||| ||||||||||||||||||
Sbjct: 644 ctgtcggagcaagagctggtggactg 669



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 136 gttcaccgaccttaccaacgaggagttc 163
           |||||||||||| ||| |||||||||||
Sbjct: 337 gttcaccgacctcacccacgaggagttc 364
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>gb|AY110563.1| Zea mays CL897_1 mRNA sequence
          Length = 794

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 429 agctggtggacctgtcggtgcaagagctggtggactgc 466
           ||||||||  |||||||| ||| |||||||||||||||
Sbjct: 115 agctggtgtccctgtcggagcaggagctggtggactgc 152
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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
              complete sequence
          Length = 130249

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 440    ctgtcggtgcaagagctggtggactg 465
              ||||||| ||||||||||||||||||
Sbjct: 101162 ctgtcggagcaagagctggtggactg 101137



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 136    gttcaccgaccttaccaacgaggagttc 163
              |||||||||||| ||| |||||||||||
Sbjct: 101840 gttcaccgacctcacccacgaggagttc 101813
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>gb|AY688678.1| Mus musculus plexin D1 (Plxnd1) mRNA, complete cds
          Length = 5938

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   cgtggacctcatcgacgcctc 90
            |||||||||||||||||||||
Sbjct: 4561 cgtggacctcatcgacgcctc 4581
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>ref|XM_953325.1| Neurospora crassa OR74A hypothetical protein (NCU07417.1) partial
           mRNA
          Length = 1371

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 381 ttgctgcggcggcgacggtgg 401
           |||||||||||||||||||||
Sbjct: 644 ttgctgcggcggcgacggtgg 664
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>ref|XM_327702.1| Neurospora crassa OR74A hypothetical protein (NCU07417.1) partial
           mRNA
          Length = 1371

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 381 ttgctgcggcggcgacggtgg 401
           |||||||||||||||||||||
Sbjct: 644 ttgctgcggcggcgacggtgg 664
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 178      cggtggagccggtgctggtggtggt 202
                |||||||||||||| ||||||||||
Sbjct: 11004629 cggtggagccggtggtggtggtggt 11004653



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 178      cggtggagccggtgctggtggtggt 202
                |||||||||||||| ||||||||||
Sbjct: 11004479 cggtggagccggtggtggtggtggt 11004503
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>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete
             sequence
          Length = 201265

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 118   tgagctcggtgagaacgagttcacc 142
             |||||||||||||||| ||||||||
Sbjct: 68197 tgagctcggtgagaacaagttcacc 68173
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>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 178    cggtggagccggtgctggtggtggt 202
              |||||||||||||| ||||||||||
Sbjct: 128643 cggtggagccggtggtggtggtggt 128619



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 178    cggtggagccggtgctggtggtggt 202
              |||||||||||||| ||||||||||
Sbjct: 128493 cggtggagccggtggtggtggtggt 128469
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>ref|NM_026376.1| Mus musculus plexin D1 (Plxnd1), mRNA
          Length = 5938

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   cgtggacctcatcgacgcctc 90
            |||||||||||||||||||||
Sbjct: 4561 cgtggacctcatcgacgcctc 4581
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>dbj|AK147513.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1058N16 product:plexin D1, full insert sequence
          Length = 6907

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   cgtggacctcatcgacgcctc 90
            |||||||||||||||||||||
Sbjct: 4602 cgtggacctcatcgacgcctc 4622
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 178      cggtggagccggtgctggtggtggt 202
                |||||||||||||| ||||||||||
Sbjct: 11001392 cggtggagccggtggtggtggtggt 11001416



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 178      cggtggagccggtgctggtggtggt 202
                |||||||||||||| ||||||||||
Sbjct: 11001242 cggtggagccggtggtggtggtggt 11001266
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>dbj|AK129175.1| Mus musculus mRNA for mKIAA0620 protein
          Length = 6178

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   cgtggacctcatcgacgcctc 90
            |||||||||||||||||||||
Sbjct: 3866 cgtggacctcatcgacgcctc 3886
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>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 178   cggtggagccggtgctggtggtggt 202
             |||||||||||||| ||||||||||
Sbjct: 48114 cggtggagccggtggtggtggtggt 48138



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 178   cggtggagccggtgctggtggtggt 202
             |||||||||||||| ||||||||||
Sbjct: 47964 cggtggagccggtggtggtggtggt 47988
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>gb|AC139761.4| Mus musculus BAC clone RP23-223C23 from 6, complete sequence
          Length = 187169

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    cgtggacctcatcgacgcctc 90
             |||||||||||||||||||||
Sbjct: 16149 cgtggacctcatcgacgcctc 16129
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>gb|AE010354.1| Methanopyrus kandleri AV19 section 53 of 157 of the complete genome
          Length = 10290

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 220  cggagatgtcgtggaagggg 239
            ||||||||||||||||||||
Sbjct: 3112 cggagatgtcgtggaagggg 3093
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>ref|XM_479798.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2807

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  gcggcggcgacggtggagag 405
            ||||||||||||||||||||
Sbjct: 2003 gcggcggcgacggtggagag 1984
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>ref|XM_466764.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 386 gcggcggcgacggtggagag 405
           ||||||||||||||||||||
Sbjct: 308 gcggcggcgacggtggagag 289
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>ref|XM_476390.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 67  caacgtggacctcatcgacgcctccaac 94
           |||||||||||||||||||  |||||||
Sbjct: 204 caacgtggacctcatcgaccgctccaac 231
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>ref|NM_001024510.1| Bos taurus coronin, actin binding protein, 1B (CORO1B), mRNA
          Length = 1865

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  acagggacgccgagaggctg 112
           ||||||||||||||||||||
Sbjct: 47  acagggacgccgagaggctg 28
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 142     cgaccttaccaacgaggagttcat 165
               ||||||| ||||||||||||||||
Sbjct: 1124381 cgacctttccaacgaggagttcat 1124404
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>ref|XM_545531.2| PREDICTED: Canis familiaris similar to Wiskott-Aldrich syndrome
           protein interacting protein (LOC488409), mRNA
          Length = 1690

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 ggagccggtgctggtggtgg 201
           ||||||||||||||||||||
Sbjct: 235 ggagccggtgctggtggtgg 254
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>ref|XM_533732.2| PREDICTED: Canis familiaris similar to plexin D1 (LOC476526), mRNA
          Length = 5781

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   gtggacctcatcgacgcctc 90
            ||||||||||||||||||||
Sbjct: 4405 gtggacctcatcgacgcctc 4424
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>ref|XM_571678.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein
           s15 (CNF03840) partial mRNA
          Length = 740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 cgaccttaccaacgaggagttcat 165
           ||||||| ||||||||||||||||
Sbjct: 138 cgacctttccaacgaggagttcat 161
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>ref|XM_808517.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506975.20) partial mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ggacctcatcgacgcctccaacag 96
           ||||||||||||||||||| ||||
Sbjct: 111 ggacctcatcgacgcctccgacag 88
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 430    gctggtggacctgtcggtgc 449
              ||||||||||||||||||||
Sbjct: 113613 gctggtggacctgtcggtgc 113594
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>gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, complete sequence
          Length = 201027

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gatgtcgtggaaggggtggt 243
             ||||||||||||||||||||
Sbjct: 15154 gatgtcgtggaaggggtggt 15173
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>gb|BC030202.1| Homo sapiens, clone IMAGE:5200695, mRNA
          Length = 298

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 383 gctgcggcggcgacggtggagagc 406
           ||||||||||||| ||||||||||
Sbjct: 276 gctgcggcggcgaaggtggagagc 253
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>gb|BC103376.1| Bos taurus coronin, actin binding protein, 1B, mRNA (cDNA clone
           MGC:127322 IMAGE:7952173), complete cds
          Length = 1951

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  acagggacgccgagaggctg 112
           ||||||||||||||||||||
Sbjct: 59  acagggacgccgagaggctg 40
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     cctgtcggtgcaagagctgg 458
               ||||||||||||||||||||
Sbjct: 2398627 cctgtcggtgcaagagctgg 2398608
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    gcggcggcgacggtggagag 405
              ||||||||||||||||||||
Sbjct: 976952 gcggcggcgacggtggagag 976933
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 67     caacgtggacctcatcgacgcctccaac 94
              |||||||||||||||||||  |||||||
Sbjct: 463486 caacgtggacctcatcgaccgctccaac 463513
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 386      gcggcggcgacggtggagag 405
                ||||||||||||||||||||
Sbjct: 24559101 gcggcggcgacggtggagag 24559120
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 430     gctggtggacctgtcggtgc 449
               ||||||||||||||||||||
Sbjct: 6289475 gctggtggacctgtcggtgc 6289494
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>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    gcggcggcgacggtggagag 405
              ||||||||||||||||||||
Sbjct: 139690 gcggcggcgacggtggagag 139671
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 67    caacgtggacctcatcgacgcctccaac 94
             |||||||||||||||||||  |||||||
Sbjct: 65650 caacgtggacctcatcgaccgctccaac 65677
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>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1014_H03
          Length = 132696

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   gcggcggcgacggtggagag 405
             ||||||||||||||||||||
Sbjct: 73202 gcggcggcgacggtggagag 73221
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>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1212_C01
          Length = 124548

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  gcggcggcgacggtggagag 405
            ||||||||||||||||||||
Sbjct: 3650 gcggcggcgacggtggagag 3669
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>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  gcggcggcgacggtggagag 405
            ||||||||||||||||||||
Sbjct: 5479 gcggcggcgacggtggagag 5460
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>gb|BT021806.1| Bos taurus coronin, actin binding protein, 1B (CORO1B), mRNA,
           complete cds
          Length = 1865

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  acagggacgccgagaggctg 112
           ||||||||||||||||||||
Sbjct: 47  acagggacgccgagaggctg 28
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>dbj|AK100696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114J05, full
            insert sequence
          Length = 2807

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  gcggcggcgacggtggagag 405
            ||||||||||||||||||||
Sbjct: 2003 gcggcggcgacggtggagag 1984
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>gb|AF184956.1|AF184956 Bacillus subtilis mycosubtilin operon, complete sequence
          Length = 46860

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gtatatcggtggagccggtg 191
             ||||||||||||||||||||
Sbjct: 12997 gtatatcggtggagccggtg 13016
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     gccggtgctggtggtggtct 204
               ||||||||||||||||||||
Sbjct: 1271088 gccggtgctggtggtggtct 1271069
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>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1567_G09
          Length = 121388

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 67    caacgtggacctcatcgacgcctccaac 94
             |||||||||||||||||||  |||||||
Sbjct: 17398 caacgtggacctcatcgaccgctccaac 17425
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>gb|AY110841.1| Zea mays CL908_1 mRNA sequence
          Length = 916

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 136 gttcaccgaccttaccaacgaggagttc 163
           |||||||||||| |||| ||||||||||
Sbjct: 23  gttcaccgacctcaccagcgaggagttc 50
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>gb|AY944523.1| Unidentified soil organism clone XIX-33 from Australia
           environmental-sample
          Length = 696

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 463 ctgcagcacgggtgtgttcagctcgccg 490
           ||||||||| |||||| |||||||||||
Sbjct: 86  ctgcagcaccggtgtgatcagctcgccg 113
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    catgcggatgctgctgggcg 379
              ||||||||||||||||||||
Sbjct: 630755 catgcggatgctgctgggcg 630774


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,588,455
Number of Sequences: 3902068
Number of extensions: 3588455
Number of successful extensions: 79641
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78839
Number of HSP's gapped (non-prelim): 800
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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