Clone Name | basd2p22 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 Score = 527 bits (266), Expect = e-146 Identities = 386/426 (90%) Strand = Plus / Plus Query: 179 ggtggagccggtgctggtggtggtctcatcactactttggccggagatgtcgtggaaggg 238 ||||||||||||| |||||||||||||||||||||||| || |||||||| || || ||| Sbjct: 367 ggtggagccggtgatggtggtggtctcatcactactttagctggagatgttgtcgagggg 426 Query: 239 gtggtatcatccaagaacactatcgaggggggcggtaatttgacgatgtccacctccgac 298 | || ||||||||||||| | ||||||| || |||||||||||||| | |||| ||| Sbjct: 427 gcggcatcatccaagaacgccatcgaggaggatcgtaatttgacgatgactgcctctgac 486 Query: 299 cctcctcggcagtttgactggagggagcatggcgctgtcacgcctgcaaagcaacaaggg 358 ||||| |||||||| ||||||||||| ||||| | ||||||||||| ||||||||||| Sbjct: 487 cctccccggcagttcgactggagggaacatggtgtcgtcacgcctgctaagcaacaagga 546 Query: 359 gcatgcggatgctgctgggcgtttgctgcggcggcgacggtggagagcttgaacaagata 418 ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 547 gcatgtggatgctgctgggcatttgctgcagcggcgacggtggagagcttgaacaagata 606 Query: 419 aatggcggggagctggtggacctgtcggtgcaagagctggtggactgcagcacgggtgtg 478 ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 607 aatggcggggagctggttgacctgtccgtgcaggagctggtggactgcagcacgggcgtg 666 Query: 479 ttcagctcgccgtgcggctacgggtggcccaagagcgcactccagtggatcaaatcaaaa 538 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 667 ttcagctcgccatgcggctacgggtggcccaagagcgcactcgcatggatcaaatcaaaa 726 Query: 539 ggtggcctcctcacggaggccgagtacccctacgtggccaagcgaggcagatgcacggtg 598 || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 727 gggggcctcctcacggaggccgagtacccctacatggccaagcgaggcagatgcgcggtg 786 Query: 599 cacgac 604 |||||| Sbjct: 787 cacgac 792 Score = 220 bits (111), Expect = 4e-54 Identities = 163/178 (91%), Gaps = 2/178 (1%) Strand = Plus / Plus Query: 7 gcatggccggacgtatccgagtgccgccganaagctgcggcggtttgaggcgtaccgtcg 66 ||||||||||||||| | |||||||| || ||| ||||||||||||||| ||||||||| Sbjct: 183 gcatggccggacgtaccatagtgccgctgagaag-tgcggcggtttgaggtgtaccgtcg 241 Query: 67 caacgtggacctcatcgacgcctccaacagggacgccgagagg-ctgggctatgagctcg 125 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 242 caacgtggacctcatcgacgcctccaacagggacgccgagaggcctcggctatgagctcg 301 Query: 126 gtgagaacgagttcaccgaccttaccaacgaggagttcatgacacggtatatcggtgg 183 | |||||||||||||||||||| || ||||||||||||||| | |||||| ||||||| Sbjct: 302 gcgagaacgagttcaccgacctcactaacgaggagttcatggcgcggtatgtcggtgg 359
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 465 gcagcacgggtgtgttcagctcgc 488 |||||||||||||||||||||||| Sbjct: 3667548 gcagcacgggtgtgttcagctcgc 3667525
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 119 gagctcggtgagaacgagttcaccgaccttaccaacgaggagttcatg 166 ||||||||||||| |||| ||||||||| |||| ||| ||||||||| Sbjct: 152275 gagctcggtgagacggagtacaccgacctcaccaccgacgagttcatg 152322
>gb|AY110047.1| Zea mays CL878_1 mRNA sequence Length = 1403 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 424 cggggagctggtggacctgtcggtgcaagagctggtggactgc 466 |||| |||||||| |||||||| ||| ||||||||||||||| Sbjct: 584 cgggaagctggtgtccctgtcggagcaggagctggtggactgc 626
>ref|XM_470991.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 440 ctgtcggtgcaagagctggtggactg 465 ||||||| |||||||||||||||||| Sbjct: 619 ctgtcggagcaagagctggtggactg 644 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 gttcaccgaccttaccaacgaggagttc 163 |||||||||||| ||| ||||||||||| Sbjct: 312 gttcaccgacctcacccacgaggagttc 339
>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23, complete sequence Length = 190837 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 317 tggagggagcatggcgctgtca 338 |||||||||||||||||||||| Sbjct: 185682 tggagggagcatggcgctgtca 185661
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 440 ctgtcggtgcaagagctggtggactg 465 ||||||| |||||||||||||||||| Sbjct: 462410 ctgtcggagcaagagctggtggactg 462385 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 gttcaccgaccttaccaacgaggagttc 163 |||||||||||| ||| ||||||||||| Sbjct: 463088 gttcaccgacctcacccacgaggagttc 463061
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagccggtgctggtggtggtc 203 |||||||||||||||||||||| Sbjct: 2310159 ggagccggtgctggtggtggtc 2310180
>dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C02, full insert sequence Length = 1377 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 440 ctgtcggtgcaagagctggtggactg 465 ||||||| |||||||||||||||||| Sbjct: 644 ctgtcggagcaagagctggtggactg 669 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 gttcaccgaccttaccaacgaggagttc 163 |||||||||||| ||| ||||||||||| Sbjct: 337 gttcaccgacctcacccacgaggagttc 364
>gb|AY110563.1| Zea mays CL897_1 mRNA sequence Length = 794 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 agctggtggacctgtcggtgcaagagctggtggactgc 466 |||||||| |||||||| ||| ||||||||||||||| Sbjct: 115 agctggtgtccctgtcggagcaggagctggtggactgc 152
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 440 ctgtcggtgcaagagctggtggactg 465 ||||||| |||||||||||||||||| Sbjct: 101162 ctgtcggagcaagagctggtggactg 101137 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 136 gttcaccgaccttaccaacgaggagttc 163 |||||||||||| ||| ||||||||||| Sbjct: 101840 gttcaccgacctcacccacgaggagttc 101813
>gb|AY688678.1| Mus musculus plexin D1 (Plxnd1) mRNA, complete cds Length = 5938 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cgtggacctcatcgacgcctc 90 ||||||||||||||||||||| Sbjct: 4561 cgtggacctcatcgacgcctc 4581
>ref|XM_953325.1| Neurospora crassa OR74A hypothetical protein (NCU07417.1) partial mRNA Length = 1371 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 ttgctgcggcggcgacggtgg 401 ||||||||||||||||||||| Sbjct: 644 ttgctgcggcggcgacggtgg 664
>ref|XM_327702.1| Neurospora crassa OR74A hypothetical protein (NCU07417.1) partial mRNA Length = 1371 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 ttgctgcggcggcgacggtgg 401 ||||||||||||||||||||| Sbjct: 644 ttgctgcggcggcgacggtgg 664
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 11004629 cggtggagccggtggtggtggtggt 11004653 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 11004479 cggtggagccggtggtggtggtggt 11004503
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 tgagctcggtgagaacgagttcacc 142 |||||||||||||||| |||||||| Sbjct: 68197 tgagctcggtgagaacaagttcacc 68173
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 128643 cggtggagccggtggtggtggtggt 128619 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 128493 cggtggagccggtggtggtggtggt 128469
>ref|NM_026376.1| Mus musculus plexin D1 (Plxnd1), mRNA Length = 5938 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cgtggacctcatcgacgcctc 90 ||||||||||||||||||||| Sbjct: 4561 cgtggacctcatcgacgcctc 4581
>dbj|AK147513.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1058N16 product:plexin D1, full insert sequence Length = 6907 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cgtggacctcatcgacgcctc 90 ||||||||||||||||||||| Sbjct: 4602 cgtggacctcatcgacgcctc 4622
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 11001392 cggtggagccggtggtggtggtggt 11001416 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 11001242 cggtggagccggtggtggtggtggt 11001266
>dbj|AK129175.1| Mus musculus mRNA for mKIAA0620 protein Length = 6178 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cgtggacctcatcgacgcctc 90 ||||||||||||||||||||| Sbjct: 3866 cgtggacctcatcgacgcctc 3886
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 48114 cggtggagccggtggtggtggtggt 48138 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 cggtggagccggtgctggtggtggt 202 |||||||||||||| |||||||||| Sbjct: 47964 cggtggagccggtggtggtggtggt 47988
>gb|AC139761.4| Mus musculus BAC clone RP23-223C23 from 6, complete sequence Length = 187169 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 cgtggacctcatcgacgcctc 90 ||||||||||||||||||||| Sbjct: 16149 cgtggacctcatcgacgcctc 16129
>gb|AE010354.1| Methanopyrus kandleri AV19 section 53 of 157 of the complete genome Length = 10290 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cggagatgtcgtggaagggg 239 |||||||||||||||||||| Sbjct: 3112 cggagatgtcgtggaagggg 3093
>ref|XM_479798.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2807 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 2003 gcggcggcgacggtggagag 1984
>ref|XM_466764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2949 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 308 gcggcggcgacggtggagag 289
>ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1059 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 67 caacgtggacctcatcgacgcctccaac 94 ||||||||||||||||||| ||||||| Sbjct: 204 caacgtggacctcatcgaccgctccaac 231
>ref|NM_001024510.1| Bos taurus coronin, actin binding protein, 1B (CORO1B), mRNA Length = 1865 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 acagggacgccgagaggctg 112 |||||||||||||||||||| Sbjct: 47 acagggacgccgagaggctg 28
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cgaccttaccaacgaggagttcat 165 ||||||| |||||||||||||||| Sbjct: 1124381 cgacctttccaacgaggagttcat 1124404
>ref|XM_545531.2| PREDICTED: Canis familiaris similar to Wiskott-Aldrich syndrome protein interacting protein (LOC488409), mRNA Length = 1690 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ggagccggtgctggtggtgg 201 |||||||||||||||||||| Sbjct: 235 ggagccggtgctggtggtgg 254
>ref|XM_533732.2| PREDICTED: Canis familiaris similar to plexin D1 (LOC476526), mRNA Length = 5781 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gtggacctcatcgacgcctc 90 |||||||||||||||||||| Sbjct: 4405 gtggacctcatcgacgcctc 4424
>ref|XM_571678.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein s15 (CNF03840) partial mRNA Length = 740 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cgaccttaccaacgaggagttcat 165 ||||||| |||||||||||||||| Sbjct: 138 cgacctttccaacgaggagttcat 161
>ref|XM_808517.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506975.20) partial mRNA Length = 1125 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 ggacctcatcgacgcctccaacag 96 ||||||||||||||||||| |||| Sbjct: 111 ggacctcatcgacgcctccgacag 88
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gctggtggacctgtcggtgc 449 |||||||||||||||||||| Sbjct: 113613 gctggtggacctgtcggtgc 113594
>gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, complete sequence Length = 201027 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gatgtcgtggaaggggtggt 243 |||||||||||||||||||| Sbjct: 15154 gatgtcgtggaaggggtggt 15173
>gb|BC030202.1| Homo sapiens, clone IMAGE:5200695, mRNA Length = 298 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 gctgcggcggcgacggtggagagc 406 ||||||||||||| |||||||||| Sbjct: 276 gctgcggcggcgaaggtggagagc 253
>gb|BC103376.1| Bos taurus coronin, actin binding protein, 1B, mRNA (cDNA clone MGC:127322 IMAGE:7952173), complete cds Length = 1951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 acagggacgccgagaggctg 112 |||||||||||||||||||| Sbjct: 59 acagggacgccgagaggctg 40
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cctgtcggtgcaagagctgg 458 |||||||||||||||||||| Sbjct: 2398627 cctgtcggtgcaagagctgg 2398608
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 976952 gcggcggcgacggtggagag 976933
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 67 caacgtggacctcatcgacgcctccaac 94 ||||||||||||||||||| ||||||| Sbjct: 463486 caacgtggacctcatcgaccgctccaac 463513
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 24559101 gcggcggcgacggtggagag 24559120
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gctggtggacctgtcggtgc 449 |||||||||||||||||||| Sbjct: 6289475 gctggtggacctgtcggtgc 6289494
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 139690 gcggcggcgacggtggagag 139671
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 67 caacgtggacctcatcgacgcctccaac 94 ||||||||||||||||||| ||||||| Sbjct: 65650 caacgtggacctcatcgaccgctccaac 65677
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 73202 gcggcggcgacggtggagag 73221
>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C01 Length = 124548 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 3650 gcggcggcgacggtggagag 3669
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 5479 gcggcggcgacggtggagag 5460
>gb|BT021806.1| Bos taurus coronin, actin binding protein, 1B (CORO1B), mRNA, complete cds Length = 1865 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 acagggacgccgagaggctg 112 |||||||||||||||||||| Sbjct: 47 acagggacgccgagaggctg 28
>dbj|AK100696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114J05, full insert sequence Length = 2807 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gcggcggcgacggtggagag 405 |||||||||||||||||||| Sbjct: 2003 gcggcggcgacggtggagag 1984
>gb|AF184956.1|AF184956 Bacillus subtilis mycosubtilin operon, complete sequence Length = 46860 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gtatatcggtggagccggtg 191 |||||||||||||||||||| Sbjct: 12997 gtatatcggtggagccggtg 13016
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gccggtgctggtggtggtct 204 |||||||||||||||||||| Sbjct: 1271088 gccggtgctggtggtggtct 1271069
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 67 caacgtggacctcatcgacgcctccaac 94 ||||||||||||||||||| ||||||| Sbjct: 17398 caacgtggacctcatcgaccgctccaac 17425
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 gttcaccgaccttaccaacgaggagttc 163 |||||||||||| |||| |||||||||| Sbjct: 23 gttcaccgacctcaccagcgaggagttc 50
>gb|AY944523.1| Unidentified soil organism clone XIX-33 from Australia environmental-sample Length = 696 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ctgcagcacgggtgtgttcagctcgccg 490 ||||||||| |||||| ||||||||||| Sbjct: 86 ctgcagcaccggtgtgatcagctcgccg 113
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 catgcggatgctgctgggcg 379 |||||||||||||||||||| Sbjct: 630755 catgcggatgctgctgggcg 630774 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,588,455 Number of Sequences: 3902068 Number of extensions: 3588455 Number of successful extensions: 79641 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78839 Number of HSP's gapped (non-prelim): 800 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)