ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2p21 |
|---|---|
| Clone Library Name | barley_pub |
>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1| precursor Length = 102 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Frame = +1 Query: 94 CCNNCR-SFSGVDVCDDAHPQCPTGCSACRVVT----TNPQTFRCADMKATVDGTCGGPC 258 CC NC SFSG+ CDD C C C V + FRC D T G CG C Sbjct: 46 CCTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPKC 102
>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:| Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk type proteinase inhibitor B-I; Bowman-Birk type proteinase inhibitor B-III] Length = 70 Score = 36.2 bits (82), Expect = 0.020 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 5/47 (10%) Frame = +1 Query: 94 CCNNCRSFSGVD-----VCDDAHPQCPTGCSACRVVTTNPQTFRCAD 219 CCN C VC D CP C++C +NP RC D Sbjct: 11 CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSCVCTRSNPPQCRCTD 57
>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)| Length = 5045 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = -2 Query: 245 QVPSTVAFMSAQRNVWGFVV---TTRHAEQPVGHCGWASSQTST 123 Q+P T FMSA N + ++ TT E P G+ W +Q+ T Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912
>IBBA_PEA (Q41065) Seed trypsin/chymotrypsin inhibitor IVA precursor (PSTI| IVA) (TI12-36) [Contains: Seed trypsin/chymotrypsin inhibitor I (PSTI I)] (Fragment) Length = 96 Score = 30.8 bits (68), Expect = 0.82 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +1 Query: 136 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 246 DD C C C +NP T RC D++ T C Sbjct: 26 DDVKSAC---CDTCLCTKSNPPTCRCVDVRETCHSAC 59 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%) Frame = +1 Query: 79 DYFPTCCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCAD 219 D CC+ C +S C D C + C +C +NP +C D Sbjct: 27 DVKSACCDTCLCTKSNPPTCRCVDVRETCHSACDSCICAYSNPPKCQCFD 76
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 30.8 bits (68), Expect = 0.82 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 8/59 (13%) Frame = +1 Query: 103 NCRSFS-GVDVCDDAHPQC-------PTGCSACRVVTTNPQTFRCADMKATVDGTCGGP 255 NCR G +CD+ QC P C C+ PQTF C + + C GP Sbjct: 1480 NCRPCDCGARLCDELTGQCICPPRTIPPDCLLCQ-----PQTFGCHPLVGCEECNCSGP 1533
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.8 bits (68), Expect = 0.82 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 15 ARGDSDPPGRPGHGSPLARERRLFPH 92 A G PPG PG G+ L ++ +FPH Sbjct: 1753 APGGYGPPGMPGGGAQLVKKELIFPH 1778
>MT_ASTFL (P55951) Metallothionein (MT)| Length = 58 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = +1 Query: 94 CCNNCRSFSGVDVCDDAHPQCPTG--CSACRVVTTNPQTFRC-ADMKATVDGTCGGPCK 261 CCN DVC+ A C TG C++CR + T C K TC PC+ Sbjct: 5 CCN--------DVCECAAGGCKTGCVCTSCRCSPCDKCTSGCKCPSKEECAKTCSKPCE 55
>IBB_MEDSC (P80321) Bowman-Birk type proteinase inhibitor (MSTI)| Length = 62 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Frame = +1 Query: 94 CCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADM 222 CC+ C RS C D +C + C +C + P RC D+ Sbjct: 8 CCDFCPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFPPQCRCYDI 53
>IBB_DOLBI (Q9S9E3) Horsegram inhibitor 1 (Horsegram inhibitor I) (Bowman-Birk| type proteinase inhibitor HGI-I) [Contains: Horsegram germinated inhibitor 1 (Horsegram germinated inhibitor I) (HGGI-I); Horsegram germinated inhibitor 2 (Horsegram germinated Length = 76 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Frame = +1 Query: 94 CCNNCRSFSGVDV---CDDAH-PQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPCK 261 CC+ C + C D C + CS+C + P C DMK C PCK Sbjct: 16 CCDQCTCTKSIPPQCRCTDVRLNSCHSACSSCVCTFSIPAQCVCVDMK----DFCYAPCK 71
>IBB3_DOLAX (P01057) Bowman-Birk type proteinase inhibitor DE-3| Length = 76 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Frame = +1 Query: 94 CCNNCRSFSGVDV---CDDAH-PQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPCK 261 CC+ C + C D C + CS+C + P C DMK C PCK Sbjct: 16 CCDECACTKSIPPQCRCTDVRLNSCHSACSSCVCTFSIPAQCVCVDMK----DFCYAPCK 71
>PRIA_LENED (Q01200) Protein priA precursor| Length = 258 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 142 AHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGG 252 A P CP G AC + ++ + C D A ++ +CGG Sbjct: 176 AVPACPKGLDACPIAGSSLGDYECLDTSAELE-SCGG 211
>IBB_LENCU (Q8W4Y8) Bowman-Birk type proteinase inhibitor precursor| (Trypsin/chymotrypsin inhibitor) Length = 110 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 3/50 (6%) Frame = +1 Query: 79 DYFPTCCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCAD 219 D CC+ C RS C D C + C C +NP +C D Sbjct: 45 DVKSACCDTCLCTRSQPPTCRCVDVRESCHSACDKCVCAYSNPPQCQCYD 94
>IBBWT_MEDSA (P16346) Bowman-Birk type wound-induced trypsin inhibitor| Length = 58 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 3/46 (6%) Frame = +1 Query: 94 CCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADM 222 CCN C RS C D C + C C + P CAD+ Sbjct: 4 CCNFCPCTRSIPPQCRCTDIGETCHSACKTCLCTKSIPPQCHCADI 49
>MVHD_METTH (Q50781) F420-non-reducing hydrogenase iron-sulfur subunit D (EC| 1.12.99.-) (Methyl viologen-reducing hydrogenase delta subunit) (MVH subunit D) Length = 140 Score = 29.6 bits (65), Expect = 1.8 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 11/86 (12%) Frame = +1 Query: 94 CCNNCRSFSGVDVCDDAHPQCPTGCSACRVVTT---NPQ----TFRCADMKATVDGTCGG 252 CCN C S+ G D A Q PT RV+ + PQ FR V G G Sbjct: 11 CCNWC-SYGGADTAGTARMQYPTNIRVIRVMCSGRIEPQFVLKAFREGADGVLVTGCHHG 69 Query: 253 PCK----KY*SAQAHMRLLFRLAPKI 318 C Y MRL+++LA ++ Sbjct: 70 DCHYDAGNY-KLDRRMRLIYKLADEL 94
>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor| Length = 3718 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 8/59 (13%) Frame = +1 Query: 103 NCRSFS-GVDVCDDAHPQC-------PTGCSACRVVTTNPQTFRCADMKATVDGTCGGP 255 NCR G +CD+ QC P C C+ PQ+F C + + C GP Sbjct: 1485 NCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQ-----PQSFGCHPLVGCEECNCSGP 1538
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC6-like) (aPC6) Length = 1696 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/55 (32%), Positives = 20/55 (36%) Frame = +1 Query: 82 YFPTCCNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 246 Y TC C D D C GC AC N T C + +A DG C Sbjct: 954 YQGTCHVTCPPGLYGDTTDQVCKACAPGCIACDGPADNQCTL-CEEERAPTDGRC 1007
>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) Length = 4543 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +1 Query: 97 CNNCRSFSGVDVCDDAHPQCPTGC---SACRVVTTNPQTFRC 213 CNN R S + VCD A C G S CR+ T + +F+C Sbjct: 2739 CNNHRCISKLWVCDGA-DDCGDGSDEDSRCRLTTCSTGSFQC 2779
>IBBB_PEA (P56679) Seed trypsin/chymotrypsin inhibitor IVB (PSTI-IVB)| [Contains: Seed trypsin/chymotrypsin inhibitor II (PSTI II)] Length = 72 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/37 (35%), Positives = 15/37 (40%) Frame = +1 Query: 136 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTC 246 DD C C C +NP T RC D+ T C Sbjct: 2 DDVKSAC---CDTCLCTKSNPPTCRCVDVGETCHSAC 35 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%) Frame = +1 Query: 79 DYFPTCCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCAD 219 D CC+ C +S C D C + C +C +NP +C D Sbjct: 3 DVKSACCDTCLCTKSNPPTCRCVDVGETCHSACLSCICAYSNPPKCQCFD 52
>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ| protein-like 5) (RecQ5) Length = 991 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Frame = +1 Query: 79 DYFPTCCNN--CRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGG 252 D T C CR + DA P C GC C+ T + + ++ TC G Sbjct: 400 DALVTFCEELGCRHAAIAKYFGDALPACAKGCDHCQNPTAVRRRLEALERSSSWSKTCIG 459 Query: 253 P 255 P Sbjct: 460 P 460
>IBB_VICFA (P24661) Bowman-Birk type proteinase inhibitor (FBI)| Length = 63 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Frame = +1 Query: 79 DYFPTCCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCAD 219 D CC+ C +S C D +C + C++C +NP +C D Sbjct: 3 DVKSACCDTCLCTKSEPPTCRCVDVGERCHSACNSCVCRYSNPPKCQCFD 52
>IBB_VICAN (P01065) Bowman-Birk type proteinase inhibitor (VAI)| Length = 72 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Frame = +1 Query: 79 DYFPTCCNNC---RSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCAD 219 D CC+ C RS C D +C + C+ C +NP +C D Sbjct: 3 DVKSACCDTCLCTRSQPPTCRCVDVGERCHSACNHCVCNYSNPPQCQCFD 52
>IBB2_ARAHY (P01067) Bowman-Birk type proteinase inhibitor B-II| Length = 63 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/29 (34%), Positives = 12/29 (41%) Frame = +1 Query: 133 CDDAHPQCPTGCSACRVVTTNPQTFRCAD 219 C D CP C+ C + P RC D Sbjct: 23 CGDTFDHCPAACNKCVCTRSIPPQCRCTD 51
>D11_DICDI (P05817) Prestalk D11 protein precursor| Length = 282 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Frame = +1 Query: 67 HVNADYFPTCCNNCRSFSGV------DVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKA 228 H + +CC C + V C D + PTGC C + T P C+ +K Sbjct: 40 HYRLNMTDSCCGRCEPCTDVACTLQVKYCQDG--EVPTGCCPCTLPPTKPD---CSLVK- 93 Query: 229 TVDGTCGGP-CKKY 267 C P CK Y Sbjct: 94 -----CATPVCKPY 102
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +3 Query: 21 GDSDPPGRPGHGSP 62 G S PPG+PG+GSP Sbjct: 75 GPSGPPGKPGYGSP 88
>COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor| Length = 680 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +3 Query: 21 GDSDPPGRPGHGSP 62 G S PPG+PG+GSP Sbjct: 75 GPSGPPGKPGYGSP 88
>OX1R_HUMAN (O43613) Orexin receptor type 1 (Ox1r) (Hypocretin receptor type 1)| Length = 425 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 144 PSAVPHRLLGVPRGDHEPPDVP 209 PSA P +GVP G EP VP Sbjct: 3 PSATPGAQMGVPPGSREPSPVP 24
>MTB_CARCW (Q8AWG1) Metallothionein B (MT-B)| Length = 60 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Frame = +1 Query: 91 TC-CNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPC 258 TC C NC+ + C P CP+GCS +CA D +CG C Sbjct: 17 TCKCTNCQCKTCKKSCC---PCCPSGCS------------KCASGCVCKDNSCGSSC 58
>YOW6_CAEEL (P30652) Hypothetical protein ZK643.6 precursor| Length = 180 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = +1 Query: 88 PTCCNNCRSF-SGVDVCDDAHPQCPTGCSACRVVTTNPQ 201 P C N ++ + V+ D QCP+ C+ C TNP+ Sbjct: 55 PDICVNLKTLCNSVEFYDKLSEQCPSTCNRCPHNGTNPE 93
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 28.1 bits (61), Expect = 5.3 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 28/99 (28%) Frame = -2 Query: 242 VPSTVAFM--SAQRNVWGFVVTT------RHAEQPVGHCGWASSQTSTPEK--------- 114 +PS + M SA N+ +V R A++ + +CGWA T T Sbjct: 20 LPSAITTMLFSADFNIQQIIVELSWVPHQRAAQRRIAYCGWAGGITKTSSSNPVIEIDRS 79 Query: 113 -----DLQ------LLQHVGK*SAFTCERTPMTRTAWRI 30 DLQ + H+ A T E P+T W I Sbjct: 80 LASAIDLQENVNVTVNVHIDAVKAITVELEPVTSNDWEI 118
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/53 (33%), Positives = 22/53 (41%) Frame = +1 Query: 94 CCNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGG 252 C +N +G D C D + P +AC V FRC DGTC G Sbjct: 2578 CVSNMLWCNGADDCGDGSDEIPCNKTACGV-----GEFRCR------DGTCIG 2619
>RET_HUMAN (P07949) Proto-oncogene tyrosine-protein kinase receptor ret| precursor (EC 2.7.10.1) (C-ret) Length = 1114 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 Query: 94 CCNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQT 204 C NC++FSG++V H CS VVT+ T Sbjct: 426 CVENCQAFSGINVQYKLH-SSGANCSTLGVVTSAEDT 461
>IBB1_SOYBN (P01055) Bowman-Birk type proteinase inhibitor precursor (BBI)| Length = 110 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/42 (30%), Positives = 19/42 (45%) Frame = +1 Query: 136 DDAHPQCPTGCSACRVVTTNPQTFRCADMKATVDGTCGGPCK 261 D++ C C C +NP RC+DM+ +C CK Sbjct: 41 DESSKPC---CDQCACTKSNPPQCRCSDMRL---NSCHSACK 76
>EMBA_MYCSM (Q50394) Probable arabinosyltransferase A (EC 2.4.2.-)| Length = 1092 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Frame = -3 Query: 358 RIGKMSPVISSELLF*APSGTIVSCEPEPIST---XXXXXXXXXXXXXXXXXSGTSGGSW 188 R G P+ + + PSG EPEP+ T +G +GG + Sbjct: 755 RFGDYGPLGGEDPVGFTPSGVSEHLEPEPVGTNPGTPNSEGPVDKPNIGIAYAGDTGGGY 814 Query: 187 SPRGTPSSR 161 +P G SR Sbjct: 815 APEGVNGSR 823
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/15 (66%), Positives = 10/15 (66%) Frame = +3 Query: 18 RGDSDPPGRPGHGSP 62 RG PPG PGHG P Sbjct: 129 RGPPGPPGLPGHGMP 143
>QUTA_EMENI (P10563) Quinic acid utilization activator| Length = 825 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +1 Query: 97 CNNCRSFSGVDVCDDAHPQCPTGCSACRVVT--TNPQ 201 C++CRS D CD A P C T S R T NP+ Sbjct: 49 CDSCRSKK--DKCDGAQPICSTCASLSRPCTYRANPK 83
>ITI6_ARATH (O22869) Putative trypsin inhibitor At2g43550 precursor| Length = 89 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 5/41 (12%) Frame = +1 Query: 73 NADYFPTCCN-NCRSFSGVD----VCDDAHPQCPTGCSACR 180 N +FPT C NCRSF G V H C C+ Sbjct: 47 NPKFFPTLCRQNCRSFKGAKGGKCVKQPKHKHIKCFCDYCK 87
>CRVP2_NAJAT (Q7ZZN8) Natrin-2 precursor (Cysteine-rich venom protein 2)| (NA-CRVP2) (Protein G2b) Length = 238 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Frame = +1 Query: 106 CRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQTFRCADM-KATVDGTCGGPCKKY 267 C S + VC CPTG + T C D A V+G C PCK + Sbjct: 153 CSSSKYLYVCQ----YCPTGNIIGSIATPYKSGPPCGDCPSACVNGLCTNPCKHH 203
>RET_MOUSE (P35546) Proto-oncogene tyrosine-protein kinase receptor ret| precursor (EC 2.7.10.1) (C-ret) Length = 1115 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +1 Query: 94 CCNNCRSFSGVDVCDDAHPQCPTGCSACRVVTTNPQT 204 C NC+ FSGV + P C+A VVT+ T Sbjct: 428 CVENCQEFSGVSIQYKLQPS-SINCTALGVVTSPEDT 463 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,742,162 Number of Sequences: 219361 Number of extensions: 1012519 Number of successful extensions: 3343 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2934 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3340 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
