Clone Information

BLAST Search Result

Clone Name	basd2p19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SKU5_ARATH (Q9SU40) Putative monocopper oxidase precursor (Skewe...	310	2e-84
2	SKS1_ARATH (Q8VXX5) Monocopper oxidase-like protein SKS1 precursor	271	2e-72
3	NTP3_TOBAC (P29162) Pollen-specific protein NTP303 precursor	167	3e-41
4	ASO_BRANA (Q00624) L-ascorbate oxidase homolog precursor (EC 1.1...	163	5e-40
5	ASO_CUCPM (P37064) L-ascorbate oxidase (EC 1.10.3.3) (Ascorbase)...	76	8e-14
6	ASO_CUCMA (P24792) L-ascorbate oxidase precursor (EC 1.10.3.3) (...	75	2e-13
7	ASO_CUCSA (P14133) L-ascorbate oxidase precursor (EC 1.10.3.3) (...	68	2e-11
8	ASO_TOBAC (Q40588) L-ascorbate oxidase precursor (EC 1.10.3.3) (...	58	2e-08
9	FIO1_SCHPO (Q09920) Iron transport multicopper oxidase fio1 prec...	54	4e-07
10	LAC3_TRAVI (Q99049) Laccase 3 precursor (EC 1.10.3.2) (Benzenedi...	52	2e-06
11	LAC1_PHLRA (Q01679) Laccase precursor (EC 1.10.3.2) (Benzenediol...	51	3e-06
12	LAC1_TRAVI (Q99044) Laccase 1 precursor (EC 1.10.3.2) (Benzenedi...	49	1e-05
13	LAC2_PLEOS (Q12739) Laccase 2 precursor (EC 1.10.3.2) (Benzenedi...	49	2e-05
14	LAC4_TRAVI (Q99055) Laccase 4 precursor (EC 1.10.3.2) (Benzenedi...	45	1e-04
15	LAC4_TRAVE (Q12719) Laccase 4 precursor (EC 1.10.3.2) (Benzenedi...	45	1e-04
16	COPA1_TRAVI (Q99056) Laccase 5 precursor (EC 1.10.3.2) (Benzened...	44	5e-04
17	LAC1_PLEOS (Q12729) Laccase 1 precursor (EC 1.10.3.2) (Benzenedi...	43	7e-04
18	LAC2_TRAVI (Q99046) Laccase 2 precursor (EC 1.10.3.2) (Benzenedi...	43	0.001
19	LAC2_TRAVE (Q12718) Laccase 2 precursor (EC 1.10.3.2) (Benzenedi...	43	0.001
20	LAC1_PYCCI (O59896) Laccase precursor (EC 1.10.3.2) (Benzenediol...	43	0.001
21	LAC5_TRAVE (Q12717) Laccase 5 precursor (EC 1.10.3.2) (Benzenedi...	42	0.002
22	LAC1_TRAHI (Q02497) Laccase precursor (EC 1.10.3.2) (Benzenediol...	41	0.003
23	LAC2_THACU (Q02075) Laccase 2 precursor (EC 1.10.3.2) (Benzenedi...	40	0.006
24	FET3_KLULA (Q6CII3) Iron transport multicopper oxidase FET3 prec...	40	0.008
25	FET3_CANGA (Q96WT3) Iron transport multicopper oxidase FET3 prec...	38	0.030
26	LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol...	36	0.088
27	LAC3_THACU (Q02079) Laccase 3 precursor (EC 1.10.3.2) (Benzenedi...	36	0.088
28	FET5_YEAST (P43561) Iron transport multicopper oxidase FET5 prec...	35	0.20
29	LAC2_PODAN (P78722) Laccase-2 precursor (EC 1.10.3.2) (Laccase I...	33	0.74
30	UL06_HHV7J (P52455) Virion protein U76	33	0.74
31	FET3_YEAST (P38993) Iron transport multicopper oxidase FET3 prec...	33	0.74
32	PSBB_POPDE (O03061) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
33	PSBB_WHEAT (P24065) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
34	PSBB_TOBAC (P06411) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
35	PSBB_SPIOL (P04160) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
36	PSBB_SECCE (P09447) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
37	PSBB_SACOF (Q6ENT8) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
38	PSBB_SACHY (Q6L376) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
39	PSBB_ORYSA (P12157) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
40	PSBB_ORYNI (Q6ENE8) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
41	PSBB_OENHO (Q9MTJ7) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
42	PSBB_OENAR (P19819) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
43	PSBB_MAIZE (P05641) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
44	PSBB_LOTJA (Q9BBQ8) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
45	PSBB_ARATH (P56777) Photosystem II P680 chlorophyll A apoprotein...	33	0.74
46	ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop...	32	1.7
47	PSBB_HORVU (P10900) Photosystem II P680 chlorophyll A apoprotein...	32	1.7
48	ATKC_BRAJA (Q89FC4) Potassium-transporting ATPase C chain (EC 3....	32	2.2
49	YHBG_SHIFL (P0A9V4) Probable ABC transporter ATP-binding protein...	31	2.8
50	YHBG_ECOLI (P0A9V1) Probable ABC transporter ATP-binding protein...	31	2.8
51	YHBG_ECOL6 (P0A9V2) Probable ABC transporter ATP-binding protein...	31	2.8
52	YHBG_ECO57 (P0A9V3) Probable ABC transporter ATP-binding protein...	31	2.8
53	TAF6L_HUMAN (Q9Y6J9) TAF6-like RNA polymerase II p300/CBP-associ...	31	3.7
54	UREE_RALSO (Q8XXT2) Urease accessory protein ureE	31	3.7
55	NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleop...	30	4.8
56	DSBA_HAEIN (P31810) Thiol:disulfide interchange protein dsbA pre...	30	4.8
57	HCY2_LIMPO (P04253) Hemocyanin II	30	4.8
58	PER_DROEQ (P92203) Period circadian protein (Fragment)	30	6.3
59	PER_DROWI (Q03297) Period circadian protein (Fragment)	30	6.3
60	PER_DROTP (P91716) Period circadian protein (Fragment)	30	6.3
61	PER_DROIN (P91613) Period circadian protein (Fragment)	30	6.3
62	JUN_CHICK (P18870) Transcription factor AP-1 (Proto-oncogene c-jun)	30	6.3
63	JUN_COTJA (P12981) Transcription factor AP-1 (Proto-oncogene c-jun)	30	6.3
64	PER_DROPV (P91698) Period circadian protein (Fragment)	30	6.3
65	PER_DROPU (P91697) Period circadian protein (Fragment)	30	6.3
66	KNG1_BOVIN (P01044) Kininogen-1 precursor (Kininogen I) (Thiol p...	30	8.2
67	BCSB_XANAC (P58933) Cyclic di-GMP-binding protein precursor (Cel...	30	8.2
68	HCYF_EURCA (Q9NFL5) Hemocyanin F chain (HcF)	30	8.2
69	PER_DRONE (P91686) Period circadian protein (Fragment)	30	8.2

>SKU5_ARATH (Q9SU40) Putative monocopper oxidase precursor (Skewed roots)|
          Length = 587

 Score =  310 bits (794), Expect = 2e-84
 Identities = 149/209 (71%), Positives = 173/209 (82%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R RV NVG+STSLN RIQGHN+ + E+EGSYT++QN+T+LDIHVGQSYSFLVTMDQNASS
Sbjct: 222 RLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASS 281

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           DYYIVAS R VNE++W RVTGV IL Y+NSKGKA G LP  P DE+DK+FSMNQARSIR 
Sbjct: 282 DYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRW 341

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRLAD 541
           NV+   ARPNPQGSF YG INVT VY LRNMPPVTI+GK+RTTLNGIS+  P+TP+RLAD
Sbjct: 342 NVSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLAD 401

Query: 542 LYEKKEVYTLDFPMMPSDGPPVIGSSVIN 628
             + K+VY LDFP  P  GP  + +S+IN
Sbjct: 402 KLKVKDVYKLDFPKRPLTGPAKVATSIIN 430

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>SKS1_ARATH (Q8VXX5) Monocopper oxidase-like protein SKS1 precursor|
          Length = 589

 Score =  271 bits (692), Expect = 2e-72
 Identities = 132/209 (63%), Positives = 158/209 (75%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R RVHNVG+STSLN RIQ H++ +VETEG YT + NFT+ D+HVGQSYSFLVTMDQ+A+S
Sbjct: 225 RIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATS 284

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           DYYIVAS RFVNE++W RVTGVAILHYSNSKG  SGPLP P  D      +M+Q ++IR 
Sbjct: 285 DYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQ 344

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRLAD 541
           N +   ARPNPQGSFHYGQIN+T  Y LR++PP  ING  R TLNGIS+  P+TP+RLAD
Sbjct: 345 NTSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLAD 404

Query: 542 LYEKKEVYTLDFPMMPSDGPPVIGSSVIN 628
             + K  Y LDFP  P + P  +  S+IN
Sbjct: 405 RNKVKGAYKLDFPDRPFNRPLRLDRSMIN 433

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>NTP3_TOBAC (P29162) Pollen-specific protein NTP303 precursor|
          Length = 554

 Score =  167 bits (423), Expect = 3e-41
 Identities = 89/183 (48%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R+R  N+G+ +S+N+R QGH M +VE EGS+T++  + +LD+HVGQ  S LVT DQ    
Sbjct: 216 RYRFCNLGMRSSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQE-PK 274

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDK-SFSMNQARSIR 358
           DYY+V S RF+ ++L    + VAI+ Y+N KG AS  LP PP +  +  ++SMNQ RS R
Sbjct: 275 DYYLVVSSRFLKQAL----SSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFR 330

Query: 359 MNVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRLA 538
            N+T  AARPNPQGS+HYGQIN+T+  K+ N     + GK R  LNGIS++   TPL+L 
Sbjct: 331 WNLTASAARPNPQGSYHYGQINITRTIKIFNSMS-QVGGKLRYGLNGISHTNGETPLKLV 389

Query: 539 DLY 547
           + +
Sbjct: 390 EYF 392

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>ASO_BRANA (Q00624) L-ascorbate oxidase homolog precursor (EC 1.10.3.3)|
           (Ascorbase)
          Length = 555

 Score =  163 bits (412), Expect = 5e-40
 Identities = 87/182 (47%), Positives = 119/182 (65%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R+ NVGV TS+N RIQ H M +VE EGS+ ++ ++ +LD+HVGQ +  +VT +Q    
Sbjct: 218 RVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQE-PK 276

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           DYY+VAS RF    L T +T   +L Y   KG AS  LP  P      ++S+NQ RS R 
Sbjct: 277 DYYMVASSRF----LKTVITTTGLLRYEGGKGPASSQLPAGP---VGWAWSLNQFRSFRW 329

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRLAD 541
           N+T  AARPNPQGS+HYG+IN+T+  KL N     ++GK R  LNG+S++ P TPL+LA+
Sbjct: 330 NLTASAARPNPQGSYHYGKINITRTIKLVNTQG-KVDGKLRFALNGVSHTEPETPLKLAE 388

Query: 542 LY 547
            +
Sbjct: 389 YF 390

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>ASO_CUCPM (P37064) L-ascorbate oxidase (EC 1.10.3.3) (Ascorbase) (ASO)|
          Length = 552

 Score = 76.3 bits (186), Expect = 8e-14
 Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 14/229 (6%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R+ +     +LN  I  H + +VE +G+Y      +++DI+ G+SYS L+T DQN S 
Sbjct: 215 RIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE 274

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y++    R  + +    +T +  L  S SK   S P   P  D++D+S      ++   
Sbjct: 275 NYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRS------KNFTY 328

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATP----- 526
            +T     P P   F+       +++ L       ING  +  +N +S + P TP     
Sbjct: 329 RITAAMGSPKPPVKFN------RRIFLLNTQN--VINGYVKWAINDVSLALPPTPYLGAM 380

Query: 527 ----LRLADLYEKKEVYTLDFPMMPSDGPPV-----IGSSVINFDVQEL 646
               L   D     EV+  D+ +   D PP      IG+ V  F + E+
Sbjct: 381 KYNLLHAFDQNPPPEVFPEDYDI---DTPPTNEKTRIGNGVYQFKIGEV 426

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>ASO_CUCMA (P24792) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)|
           (ASO)
          Length = 579

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 11/226 (4%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R+ +     +LN  I  H + +VE +G+Y      +++DI+ G+SYS L+T DQN S 
Sbjct: 245 RIRIASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE 304

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y++    R  + +    +T +  L  S SK   S P   P  D++D+S +     + R+
Sbjct: 305 NYWVSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPPPETPAWDDFDRSKNF----TYRI 360

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATP----- 526
               G+ +P  + +     +N   V          ING  +  +N +S + P TP     
Sbjct: 361 TAAMGSPKPPVKSNRRIFLLNTQNV----------INGYVKWAINDVSLALPPTPYLGAM 410

Query: 527 ----LRLADLYEKKEVYTLDFPM--MPSDGPPVIGSSVINFDVQEL 646
               L   D     EV+  D+ +   P++    IG+ V  F + E+
Sbjct: 411 KFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEI 456

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>ASO_CUCSA (P14133) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)|
           (ASO)
          Length = 587

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R+ +     SLN  I  H + +VE +G+Y      +++DI+ G+SYS L+T DQN   
Sbjct: 250 RIRIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLE 309

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHY-SNSKGKASGPLPDPPNDEYDKSFSMNQARSIR 358
           +Y++      V   L     G+ +L+Y  NS  K   P+  PP   + + F  ++  + R
Sbjct: 310 NYWVSIG---VRARLPKTPPGLTLLNYLPNSASKL--PISPPPETPHWEDFDRSKNFTFR 364

Query: 359 MNVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATP---- 526
           +    G+ +P  + +     +N              ING  +  +N +S + P TP    
Sbjct: 365 IFAAMGSPKPPVRYNRRLFLLNTQN----------RINGFMKWAINNVSLALPPTPYLAA 414

Query: 527 --LRLADLYEKK---EVYTLDFPM--MPSDGPPVIGSSVINFDVQE 643
             +RL   + +    E + L++ +   P +     G+ V  F++ E
Sbjct: 415 MKMRLNTAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYKFNMGE 460

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>ASO_TOBAC (Q40588) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase)|
           (ASO)
          Length = 578

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 38/132 (28%), Positives = 66/132 (50%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R RV +     SL+L I GH M +VE +G+Y    +  ++DI+ G+SYS L   DQ+ + 
Sbjct: 243 RLRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTK 302

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y+I  + R           G+ +L+Y  +       LP PP       ++ +++ S ++
Sbjct: 303 NYWISINVRGREPK---TPQGLTLLNYLPNSASKFPTLP-PPIAPLWNDYNHSKSFSNKI 358

Query: 362 NVTTGAARPNPQ 397
               G+ +P PQ
Sbjct: 359 FALMGSPKPPPQ 370

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>FIO1_SCHPO (Q09920) Iron transport multicopper oxidase fio1 precursor (EC|
           1.-.-.-)
          Length = 622

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R  N+G   + ++ I+ HNM ++E +G YT  Q  +++ + V Q YS LVT   +   
Sbjct: 214 RLRFINIGAFNNYDVMIEDHNMTIIEVDGEYTEPQEVSSIHLTVAQRYSVLVTAKNSTDR 273

Query: 182 DYYIVASPRFVNESLWTRVTG------VAILHYSNSKGKASGPLPDPPNDEYD 322
           +Y I A   +++ESL+  +         A L Y++      GP  D   D YD
Sbjct: 274 NYAITA---YMDESLFDTIPDNYNPNVTAWLSYNSDASYDLGPDID-EIDSYD 322

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>LAC3_TRAVI (Q99049) Laccase 3 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 473

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 30/105 (28%), Positives = 50/105 (47%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ +     + N  I GH M ++E +G  T       L I   Q YSF++  +Q A +
Sbjct: 213 RFRLVSTSCDPNYNFTIDGHTMTIIEADGQNTQPHQVDGLQIFAAQRYSFVLNANQ-AVN 271

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDE 316
           +Y+I A+P   N + +      AIL Y  +      P+ +P  ++
Sbjct: 272 NYWIRANPNRANTTGFANGINSAILRYKGA------PIKEPTTNQ 310

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>LAC1_PHLRA (Q01679) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Ligninolytic
           phenoloxidase)
          Length = 520

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++   +     I GH++ ++E + +         L I+ GQ YSF++T DQ+   
Sbjct: 219 RFRLVSISCDSFFTFSIDGHSLNVIEVDATNHQPLTVDELTIYAGQRYSFILTADQDV-D 277

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y+I A+P     + +      AIL Y  +       + +P   +      ++++    +
Sbjct: 278 NYWIRANPGIGITTGFAGGINSAILRYDGA------DVVEPTTTQATSPVVLSES---NL 328

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKK-RTTLNGISYSPPATPLRL- 535
              T AA P   G    G +++   + L      T +G   +  +NG+++ PP  P+ L 
Sbjct: 329 APLTNAAAP---GLPEVGGVDLALNFNL------TFDGPSLKFQINGVTFVPPTVPVLLQ 379

Query: 536 --------ADLYEKKEVYTL 571
                   ADL     VY L
Sbjct: 380 ILSGAQSAADLLPSGSVYAL 399

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>LAC1_TRAVI (Q99044) Laccase 1 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 520

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 9/199 (4%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GHNM ++ET+   T      ++ I   Q YSF++  +Q A  
Sbjct: 218 RFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQ-AVD 276

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y+I A+P F N   +T     AIL Y  +         +P   +   +  +N+  ++  
Sbjct: 277 NYWIRANPNFGNVG-FTGGINSAILRYDGAAA------VEPTTTQTTSTAPLNEV-NLHP 328

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRL-- 535
            VTT        G      IN+   +   N             +NG S++PP  P+ L  
Sbjct: 329 LVTTAVPGSPVAGGVDLA-INMAFNFNGTNF-----------FINGTSFTPPTVPVLLQI 376

Query: 536 -------ADLYEKKEVYTL 571
                   DL     VY+L
Sbjct: 377 ISGAQNAQDLLPSGSVYSL 395

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>LAC2_PLEOS (Q12739) Laccase 2 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 533

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 40/178 (22%), Positives = 72/178 (40%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GH++ ++E +    +     ++ I  GQ YSF++T +Q A  
Sbjct: 230 RFRLVSMSCDPNFTFSIDGHSLLVIEADAVNIVPITVDSIQIFAGQRYSFVLTANQ-AVD 288

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y+I A+P   +      +   AIL Y       +G   D P      S  + +   + +
Sbjct: 289 NYWIRANPNLGSTGFVGGINS-AILRY-------AGATEDDPTTTSSTSTPLLETNLVPL 340

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRL 535
                   P P G+     IN+   +                T+NG+ + PP  P+ L
Sbjct: 341 ENPGAPGPPVPGGADI--NINLAMAFDFTTF---------ELTINGVPFLPPTAPVLL 387

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>LAC4_TRAVI (Q99055) Laccase 4 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 520

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLN--LRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNA 175
           R+R+  + +S   N    I GHNM ++E +          ++ I+ GQ YSF++T DQ+ 
Sbjct: 217 RYRMRLLSLSCDPNYVFSIDGHNMTIIEADAVNHEPLTVDSIQIYAGQRYSFVLTADQDI 276

Query: 176 SSDYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSI 355
             +Y+I A P     S    +   AIL YS +         DP   E      +++A  +
Sbjct: 277 -DNYFIRALPSAGTTSFDGGINS-AILRYSGASE------VDPTTTETTSVLPLDEANLV 328

Query: 356 RMNVTTGAARPNPQG 400
            ++       PN  G
Sbjct: 329 PLDSPAAPGDPNIGG 343

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>LAC4_TRAVE (Q12719) Laccase 4 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 520

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLN--LRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNA 175
           R+R+  + +S   N    I GHNM ++E +          ++ I+ GQ YSF++T DQ+ 
Sbjct: 217 RYRMRLLSLSCDPNYVFSIDGHNMTIIEADAVNHEPLTVDSIQIYAGQRYSFVLTADQDI 276

Query: 176 SSDYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSI 355
             +Y+I A P     S    +   AIL YS +         DP   E      +++A  +
Sbjct: 277 -DNYFIRALPSAGTTSFDGGINS-AILRYSGASE------VDPTTTETTSVLPLDEANLV 328

Query: 356 RMNVTTGAARPNPQG 400
            ++       PN  G
Sbjct: 329 PLDSPAAPGDPNIGG 343

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>COPA1_TRAVI (Q99056) Laccase 5 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase)
          Length = 527

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GHNM ++E +G      +  ++ I  GQ YSF++  +Q+   
Sbjct: 222 RFRLVSISCDPNFTFSIDGHNMTIIEVDGVNHEALDVDSIQIFAGQRYSFILNANQSI-D 280

Query: 182 DYYIVASPRFVNESLWTRVTGV--AILHYSNSK 274
           +Y+I A P   N        GV  AIL Y  ++
Sbjct: 281 NYWIRAIP---NTGTTDTTGGVNSAILRYDTAE 310

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>LAC1_PLEOS (Q12729) Laccase 1 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 529

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 9/200 (4%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GH++ ++E +    +     ++ I  GQ YSF++  +Q    
Sbjct: 228 RFRLISMSCDPNFTFSIDGHSLQVIEADAVNIVPIVVDSIQIFAGQRYSFVLNANQTV-D 286

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y+I A P   +      +   AIL Y       +G   D P      S  + +   + +
Sbjct: 287 NYWIRADPNLGSTGFDGGINS-AILRY-------AGATEDDPTTTSSTSTPLEETNLVPL 338

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRL-- 535
               GA  P   G      IN+   + + N            T+NG  +  P  P+ L  
Sbjct: 339 E-NPGAPGPAVPGGADI-NINLAMAFDVTNF---------ELTINGSPFKAPTAPVLLQI 387

Query: 536 -------ADLYEKKEVYTLD 574
                  A L     +Y+L+
Sbjct: 388 LSGATTAASLLPSGSIYSLE 407

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>LAC2_TRAVI (Q99046) Laccase 2 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 519

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 41/178 (23%), Positives = 72/178 (40%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GHN+ ++E +G  +      ++ I   Q YSF++  +Q    
Sbjct: 217 RFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTV-G 275

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y++ A+P F        +   AIL Y  +      P+ +P   +      +     I  
Sbjct: 276 NYWVRANPNFGTVGFAGGINS-AILRYQGA------PVAEPTTTQTPSVIPL-----IET 323

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRL 535
           N+   A  P P      G      V K  N+     NG     +N  +++PP  P+ L
Sbjct: 324 NLHPLARMPVP------GSPTPGGVDKALNL-AFNFNG-TNFFINNATFTPPTVPVLL 373

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>LAC2_TRAVE (Q12718) Laccase 2 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
           (Laccase I)
          Length = 519

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 20/122 (16%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GHN+ ++E +G  +      ++ I   Q YSF++  +Q    
Sbjct: 217 RFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTV-G 275

Query: 182 DYYIVASPRF--------------------VNESLWTRVTGVAILHYSNSKGKASGPLPD 301
           +Y++ A+P F                    V E   T+ T V  L  +N    A  P+P 
Sbjct: 276 NYWVRANPNFGTVGFAGGINSAILRYQGAPVAEPTTTQTTSVIPLIETNLHPLARMPVPG 335

Query: 302 PP 307
            P
Sbjct: 336 SP 337

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>LAC1_PYCCI (O59896) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Ligninolytic
           phenoloxidase)
          Length = 518

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 44/178 (24%), Positives = 70/178 (39%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GH M ++E +   T      ++ I   Q YSF++   Q    
Sbjct: 218 RFRLVSLSCDPNHTFSIDGHTMTVIEADSVNTQPLEVDSIQIFAAQRYSFVLDASQPV-D 276

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRM 361
           +Y+I A+P F N      +   AIL Y  +      P  +P   +   +  +N+A    +
Sbjct: 277 NYWIRANPAFGNVGFAGGINS-AILRYDGA------PEVEPTTTQTTSTKPLNEADLHPL 329

Query: 362 NVTTGAARPNPQGSFHYGQINVTQVYKLRNMPPVTINGKKRTTLNGISYSPPATPLRL 535
                  RP   G           V K  NM     NG     +N  S+ PP+ P+ L
Sbjct: 330 TPMPVPGRPEAGG-----------VDKPLNM-VFNFNG-TNFFINNHSFVPPSVPVLL 374

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>LAC5_TRAVE (Q12717) Laccase 5 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
           (Laccase IV)
          Length = 527

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GHNM ++E  G      +  ++ I  GQ YSF++  +Q+   
Sbjct: 222 RFRLVSISCDPNFTFSIDGHNMTIIEVGGVNHEALDVDSIQIFAGQRYSFILNANQSI-D 280

Query: 182 DYYIVASPRFVNESLWTRVTGV--AILHYSNSK 274
           +Y+I A P   N        GV  AIL Y  ++
Sbjct: 281 NYWIRAIP---NTGTTDTTGGVNSAILRYDTAE 310

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>LAC1_TRAHI (Q02497) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Ligninolytic
           phenoloxidase)
          Length = 520

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           RFR+ ++    +    I GH++ ++E +   +      ++ I   Q YSF++  DQ+   
Sbjct: 218 RFRLVSLSCDPNHTFSIDGHDLTIIEVDSINSQPLVVDSIQIFAAQRYSFVLNADQDV-G 276

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNS---KGKASGPLPDPPNDEYD 322
           +Y+I A+P F N      +   AIL Y  +   +   +   P  P +E D
Sbjct: 277 NYWIRANPNFGNVGFAGGINS-AILRYDGADPVEPTTTQTTPTKPLNEVD 325

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>LAC2_THACU (Q02075) Laccase 2 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 599

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 29/91 (31%), Positives = 41/91 (45%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R+ N     S    +QGH   ++E +G  T        DI  GQ YS ++  DQ+  S
Sbjct: 226 RLRIINASAIASFRFGVQGHKCTIIEADGVLTKPIEVDAFDILAGQRYSCILKADQDPDS 285

Query: 182 DYYIVASPRFVNESLWTRVTGVAILHYSNSK 274
            Y+I A    +   L T V   A+L Y + K
Sbjct: 286 -YWINAP---ITNVLNTNVQ--ALLVYEDDK 310



 Score = 30.4 bits (67), Expect = 4.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 488 TLNGISYSPPATPLRLADLYEKKEVYTLDF 577
           T+N +SYSPP  P  L  L +K +V   DF
Sbjct: 440 TINNVSYSPPDVPTLLKILTDKDKVDASDF 469

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>FET3_KLULA (Q6CII3) Iron transport multicopper oxidase FET3 precursor (EC|
           1.-.-.-)
          Length = 631

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = +2

Query: 8   RVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASSDY 187
           R+ N G   S    I+ H+M +VE +G Y  K   + L I V Q YS L+    + S +Y
Sbjct: 217 RIVNTGGFVSQYFWIEDHDMTVVEVDGVYVEKNTTSMLYITVAQRYSVLIHTKNDTSKNY 276

Query: 188 YIV 196
            I+
Sbjct: 277 AIM 279

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>FET3_CANGA (Q96WT3) Iron transport multicopper oxidase FET3 precursor (EC|
           1.-.-.-)
          Length = 635

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = +2

Query: 8   RVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASSDY 187
           R+ NVG   S    I+ H M +VE +G Y  K     L I V Q Y+ LV    + S ++
Sbjct: 212 RIVNVGGFVSQYFWIEDHEMEVVEVDGVYVEKNTTNMLYITVAQRYAVLVHTKNDTSKNF 271

Query: 188 YIV 196
            I+
Sbjct: 272 AIM 274

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>LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase)
          Length = 591

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 18/63 (28%), Positives = 34/63 (53%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R+ N  V  +  + I GH+M ++E++  +    +FT   + VG    + VT+D + ++
Sbjct: 260 RLRIINTSVENNFQVSIVGHSMTVIESD--FVPVDSFTTDSLFVGIGQRYDVTIDASQAT 317

Query: 182 DYY 190
           D Y
Sbjct: 318 DNY 320

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>LAC3_THACU (Q02079) Laccase 3 precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase) (Diphenol oxidase)
          Length = 572

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R RV N     S  + IQGH M ++  +G  T      + DI  GQ    +V  + N   
Sbjct: 223 RLRVINSSAIASFRMSIQGHKMTVIAADGVSTKPYQVDSFDILAGQRIDAVV--EANQEP 280

Query: 182 DYYIVASP 205
           D Y + +P
Sbjct: 281 DTYWINAP 288

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>FET5_YEAST (P43561) Iron transport multicopper oxidase FET5 precursor (EC|
           1.-.-.-)
          Length = 622

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +2

Query: 5   FRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFT-NLDIHVGQSYSFLV 157
           FR  NVG+  S  + ++ H M++VE +G Y +K NFT ++ +  GQ  S L+
Sbjct: 213 FRFLNVGLFVSQYIILEDHEMSIVEVDGVY-VKPNFTDSIYLSAGQRMSVLI 263

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>LAC2_PODAN (P78722) Laccase-2 precursor (EC 1.10.3.2) (Laccase II)|
           (Benzenediol:oxygen oxidoreductase) (Urishiol oxidase)
           (Diphenol oxidase) (Laccase C)
          Length = 621

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 2   RFRVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASS 181
           R R+ N        L++Q H M ++  +      Q   +L + VGQ Y   VT+D N S 
Sbjct: 271 RLRIINTSTHDHFQLKLQNHTMTIIAADMVPVQAQTVDSLFLAVGQRYD--VTIDANKSV 328

Query: 182 DYY 190
             Y
Sbjct: 329 GNY 331

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>UL06_HHV7J (P52455) Virion protein U76|
          Length = 640

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +2

Query: 80  TEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASSDYYIVASPRFVNESL 226
           T+ S T   +FTN++I+  +S   +  +  N   +Y++ ++P F+N  L
Sbjct: 217 TQISSTSIADFTNINIYRNKSDGNITCLSNNKELEYFVYSAPYFINNQL 265

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>FET3_YEAST (P38993) Iron transport multicopper oxidase FET3 precursor (EC|
           1.-.-.-)
          Length = 636

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +2

Query: 8   RVHNVGVSTSLNLRIQGHNMAMVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASSDY 187
           R+ NVG   S    I+ H M +VE +G  T K     L I V Q Y+ LV    +   ++
Sbjct: 212 RIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNF 271

Query: 188 YIV 196
            I+
Sbjct: 272 AIM 274

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>PSBB_POPDE (O03061) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 509

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 407 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 442

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>PSBB_WHEAT (P24065) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRSQLGEIFELDRATLKSDG 441

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>PSBB_TOBAC (P06411) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_SPIOL (P04160) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein) (cp47 protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_SECCE (P09447) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRSQLGEIFELDRATLKSDG 441

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>PSBB_SACOF (Q6ENT8) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_SACHY (Q6L376) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_ORYSA (P12157) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRSQLGEIFELDRATLKSDG 441

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>PSBB_ORYNI (Q6ENE8) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRSQLGEIFELDRATLKSDG 441

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>PSBB_OENHO (Q9MTJ7) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_OENAR (P19819) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_MAIZE (P05641) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_LOTJA (Q9BBQ8) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>PSBB_ARATH (P56777) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG+SYS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDG 441

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>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 257 HYSNSKGKASGPLPDPPNDEYDKSFSMNQARSIRMNVTTGAARPNPQGSFH----YGQIN 424
           H+ NS     G  P P      +S + + A    M+ + G+ RP P G  H    +GQ++
Sbjct: 496 HHGNSGPPPPGAYPHPL-----ESSNSHHAHPYNMSPSLGSLRPYPPGPAHLPPSHGQVS 550

Query: 425 VTQVYKLRNMPPVTINGKKRTTLNGISYS 511
            +Q     N PPV+ +     + +  +YS
Sbjct: 551 YSQAGP--NGPPVSSSSNSSGSSSQAAYS 577

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>PSBB_HORVU (P10900) Photosystem II P680 chlorophyll A apoprotein (CP-47|
           protein)
          Length = 508

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 491 LNGISYSPPATPLRLADLYEKKEVYTLDFPMMPSDG 598
           LNG++YS PAT  + A   +  E++ LD   + SDG
Sbjct: 406 LNGVNYSDPATVKKYARRSQLGEIFELDRATLKSDG 441

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>ATKC_BRAJA (Q89FC4) Potassium-transporting ATPase C chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase C chain) (ATP
           phosphohydrolase [potassium-transporting] C chain)
           (Potassium-binding and translocating subunit C)
          Length = 201

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = +2

Query: 263 SNSKGKASGP----LPDPPNDEYDKSFSMNQARSIRMN-VTTGAARPNPQGSFHYGQINV 427
           +NS G   GP    L D   ++ DK  + N   ++ ++ VTT A+  +P  S    Q  V
Sbjct: 92  ANSGGSNLGPTSKALADRLKEDVDKLKAENPNAAVPVDLVTTSASGLDPDISPEAAQFQV 151

Query: 428 TQVYKLRNMPPVTINGKKRTTLNG 499
            +V K RNMP   +     + + G
Sbjct: 152 PRVAKARNMPEEAVKQLVASNVQG 175

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>YHBG_SHIFL (P0A9V4) Probable ABC transporter ATP-binding protein yhbG|
          Length = 240

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -3

Query: 220 LVHEPRAGHD---VIVTACILVHGDQKGVGLPHMDVEVGEILLHRVRALCLHHGHVVALD 50
           L+ EP AG D   VI    I+ H    G+G+   D  V E L    RA  +  GH++A  
Sbjct: 159 LLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHG 218

Query: 49  PQVQARRDSHI 17
              +  +D H+
Sbjct: 219 TPTEILQDEHV 229

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>YHBG_ECOLI (P0A9V1) Probable ABC transporter ATP-binding protein yhbG|
          Length = 240

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -3

Query: 220 LVHEPRAGHD---VIVTACILVHGDQKGVGLPHMDVEVGEILLHRVRALCLHHGHVVALD 50
           L+ EP AG D   VI    I+ H    G+G+   D  V E L    RA  +  GH++A  
Sbjct: 159 LLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHG 218

Query: 49  PQVQARRDSHI 17
              +  +D H+
Sbjct: 219 TPTEILQDEHV 229

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>YHBG_ECOL6 (P0A9V2) Probable ABC transporter ATP-binding protein yhbG|
          Length = 240

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -3

Query: 220 LVHEPRAGHD---VIVTACILVHGDQKGVGLPHMDVEVGEILLHRVRALCLHHGHVVALD 50
           L+ EP AG D   VI    I+ H    G+G+   D  V E L    RA  +  GH++A  
Sbjct: 159 LLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHG 218

Query: 49  PQVQARRDSHI 17
              +  +D H+
Sbjct: 219 TPTEILQDEHV 229

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>YHBG_ECO57 (P0A9V3) Probable ABC transporter ATP-binding protein yhbG|
          Length = 240

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = -3

Query: 220 LVHEPRAGHD---VIVTACILVHGDQKGVGLPHMDVEVGEILLHRVRALCLHHGHVVALD 50
           L+ EP AG D   VI    I+ H    G+G+   D  V E L    RA  +  GH++A  
Sbjct: 159 LLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHG 218

Query: 49  PQVQARRDSHI 17
              +  +D H+
Sbjct: 219 TPTEILQDEHV 229

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>TAF6L_HUMAN (Q9Y6J9) TAF6-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 6L
           (PCAF-associated factor 65 alpha) (PAF65-alpha)
          Length = 622

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 205 RAGHDVIVTACILVHGDQKGVGLPHMDVEVGEILLHRVRALCLHHGHVVAL 53
           R G  ++++     HGD       H+ + + +IL   VR LC H+G VV L
Sbjct: 264 RDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGL 314

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>UREE_RALSO (Q8XXT2) Urease accessory protein ureE|
          Length = 211

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = +1

Query: 64  HGHGGDRGLVHDEAEFHQPRHPCGAVLLLSGHHGPECKQ*LLHR 195
           HGH  DRG  H  +  H   H  G V      HGP C     HR
Sbjct: 172 HGHSHDRGCDHSHSHSHDHDHDHGHV------HGPGCGHAPHHR 209

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>NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 753

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +2

Query: 152 LVTMDQNA--SSDYYIVASPRFV-NESLWTRVTGVAILHYSNSKGKASGPLPDPPNDE 316
           LVT+ +N     D  +VA P ++  E+  T +T V++LH   + GK  GPLP  P  E
Sbjct: 248 LVTVSKNIFEQKDRDVVAYPLYILYENGETFLTYVSLLHSPGNIGKLLGPLPMHPAAE 305

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>DSBA_HAEIN (P31810) Thiol:disulfide interchange protein dsbA precursor|
          Length = 205

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 416 QINVTQVYKLRNMPPVTINGKKRTTLNGISY 508
           Q+N  + +K+R +P   +NGK R    G++Y
Sbjct: 158 QVNAAEQFKVRGVPDFYVNGKFRVNPEGLNY 188

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>HCY2_LIMPO (P04253) Hemocyanin II|
          Length = 628

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +2

Query: 209 FVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYDKSFSMNQA 346
           FVNE L+     VA+LH  + KG    P+ +   D++  S ++N+A
Sbjct: 83  FVNEGLFAFAAEVAVLHRDDCKGLYVPPVQEIFPDKFIPSAAINEA 128

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>PER_DROEQ (P92203) Period circadian protein (Fragment)|
          Length = 395

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 37  LEPEDPGPQHGHGGDRGLVHD-EAEFHQPR 123
           LE   PGP HGHG  RG  H  E E ++P+
Sbjct: 164 LEYSGPGPGHGHGIKRGGSHSWEGEANKPK 193

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>PER_DROWI (Q03297) Period circadian protein (Fragment)|
          Length = 1093

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 37  LEPEDPGPQHGHGGDRGLVHD-EAEFHQPR 123
           LE   PGP HGHG  RG  H  E E ++P+
Sbjct: 681 LEYSGPGPGHGHGIKRGGSHSWEGEANKPK 710

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>PER_DROTP (P91716) Period circadian protein (Fragment)|
          Length = 390

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 37  LEPEDPGPQHGHGGDRGLVHD-EAEFHQPR 123
           LE   PGP HGHG  RG  H  E E ++P+
Sbjct: 164 LEYSGPGPGHGHGIKRGGSHSWEGEANKPK 193

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>PER_DROIN (P91613) Period circadian protein (Fragment)|
          Length = 391

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 37  LEPEDPGPQHGHGGDRGLVHD-EAEFHQPR 123
           LE   PGP HGHG  RG  H  E E ++P+
Sbjct: 164 LEYSGPGPGHGHGIKRGGSHSWEGEANKPK 193

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>JUN_CHICK (P18870) Transcription factor AP-1 (Proto-oncogene c-jun)|
          Length = 314

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +2

Query: 398 GSFHYGQINVTQVY-KLRNMPPVTINGKKRTTLNGISYSP-----PATPLRLADLYEKKE 559
           GSF+    +   VY  L N  P  +N       NG+ Y+P     P  P++   L   KE
Sbjct: 151 GSFNTSLHSEPPVYANLSNFNPNALNSAPNYNANGMGYAPQHHINPQMPVQHPRLQALKE 210

Query: 560 VYTLDFPMMPSDGPPVIGSSVINFDVQE 643
                 P MP + PP+   S I+ + QE
Sbjct: 211 -EPQTVPEMPGETPPL---SPIDMESQE 234

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>JUN_COTJA (P12981) Transcription factor AP-1 (Proto-oncogene c-jun)|
          Length = 313

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +2

Query: 398 GSFHYGQINVTQVY-KLRNMPPVTINGKKRTTLNGISYSP-----PATPLRLADLYEKKE 559
           GSF+    +   VY  L N  P  +N       NG+ Y+P     P  P++   L   KE
Sbjct: 150 GSFNTSLHSEPPVYANLSNFNPNALNSAPNYNANGMGYAPQHHINPQMPVQHPRLQALKE 209

Query: 560 VYTLDFPMMPSDGPPVIGSSVINFDVQE 643
                 P MP + PP+   S I+ + QE
Sbjct: 210 -EPQTVPEMPGETPPL---SPIDMESQE 233

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>PER_DROPV (P91698) Period circadian protein (Fragment)|
          Length = 396

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 37  LEPEDPGPQHGHGGDRGLVHD-EAEFHQPR 123
           LE   PGP HGHG  RG  H  E E ++P+
Sbjct: 164 LEYSGPGPGHGHGIKRGGSHSWEGEANKPK 193

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>PER_DROPU (P91697) Period circadian protein (Fragment)|
          Length = 396

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 37  LEPEDPGPQHGHGGDRGLVHD-EAEFHQPR 123
           LE   PGP HGHG  RG  H  E E ++P+
Sbjct: 164 LEYSGPGPGHGHGIKRGGSHSWEGEANKPK 193

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>KNG1_BOVIN (P01044) Kininogen-1 precursor (Kininogen I) (Thiol proteinase|
           inhibitor) [Contains: Kininogen-1 heavy chain;
           Bradykinin (Kallidin I); Lysyl-bradykinin (Kallidin II);
           Kininogen-1 light chain]
          Length = 621

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +1

Query: 46  EDPGPQHGHGGDRG---LVHDEAEFHQPRHPCGAVLLLSGHHG 165
           ++ GP HGHG D G    +H     H+ +H  G      GHHG
Sbjct: 420 KEQGPTHGHGWDHGKQIKLHGLGLGHKHKHDQG-----HGHHG 457

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>BCSB_XANAC (P58933) Cyclic di-GMP-binding protein precursor (Cellulose|
           synthase regulatory subunit)
          Length = 788

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -1

Query: 153 RKE*DCPTWMS--RLVKFCFIVYEPSVSTMAMLWPWILRFKLVETPTLWTRKR 1
           R+  D P+W+S  R V+F  +V +PS   +A   P ++R  L   P L+  KR
Sbjct: 358 RRPYDAPSWVSSERPVRFGDLVTQPSQLNVAGYHPDLIRIGLQLPPDLFVWKR 410

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>HCYF_EURCA (Q9NFL5) Hemocyanin F chain (HcF)|
          Length = 628

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +2

Query: 143 YSFLVTMDQNASSDYYIVASPRFVNESLWTRVTGVAILHYSNSKGKASGPLPDPPNDEYD 322
           Y  L   D  A   +    +   VNE L+     VAILH  + +G    P+ +   D + 
Sbjct: 60  YQILYKADSFADFIHLAQQARDIVNEGLFVYSVSVAILHRDDCRGVTVPPIQEIFPDRFV 119

Query: 323 KSFSMNQA 346
            + ++NQA
Sbjct: 120 PAETVNQA 127

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>PER_DRONE (P91686) Period circadian protein (Fragment)|
          Length = 385

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 25  SLDELEPEDPGPQHGHGGDRGLVHD-EAEFHQPR 123
           +L  +E   PGP HGHG  RG  H  E E ++P+
Sbjct: 161 TLKMVEYSGPGPGHGHGIKRGGSHSWEGEANKPK 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,178,520
Number of Sequences: 219361
Number of extensions: 2405433
Number of successful extensions: 6726
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 6428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6704
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result