ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd2p17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 301 bits (152), Expect = 8e-79 Identities = 303/358 (84%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 71 agaccctgac-gggcaagaccatcacactggaggtggagtcctctgacaccatcgacaac 129 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||||||||||||| |||||||||||||| | |||||||||||||| ||||||||| Sbjct: 130 gtcaaggcgaagatccaggacaaggagggcatccctccggaccagcagcgcctcatcttt 189 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || |||||||| || || |||||||| |||||||| ||||||||| Sbjct: 190 gctggcaagcagctcgaggatggccgcaccctggctgactataacatccagaaggagtcc 249 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||||| |||| | |||| |||||||| || ||||| ||||| | Sbjct: 250 actctccacctggtgctcaggcttcgtggaggcatgcagattttcgtgaagaccctcacc 309 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| ||| |||||||||| | | ||||||||| ||| ||| ||||||||| Sbjct: 310 ggcaagaccatcacactggaggtggagtcctctgacaccatcgacaacgtcaaggcgaag 369 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| || ||||| |||||||||||| ||||||| ||||| ||||| Sbjct: 370 atccaggacaa-ggagggcatccctccggaccagcagc-gcctcattttcgccggcaa 425 Score = 204 bits (103), Expect = 1e-49 Identities = 160/181 (88%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 310 ggcaagaccatcacactggaggtggagtcctctgacaccatcgacaacgtcaaggcgaag 369 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | |||||||||||||| ||||| || || |||||||| Sbjct: 370 atccaggacaaggagggcatccctccggaccagcagcgcctcattttcgccggcaagcag 429 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 430 ctcgaggatggccgcactctggcagactacaacatccagaaggagtctacccttcacctg 489 Query: 193 g 193 | Sbjct: 490 g 490 Score = 161 bits (81), Expect = 2e-36 Identities = 166/199 (83%), Gaps = 2/199 (1%) Strand = Plus / Plus Query: 160 tacaacatccanaaggagtccaccctncacctggagctccgncttcnnnnnnnnatgcag 219 ||||||||||| |||||||||||||| ||||||| |||||| |||| |||||| Sbjct: 1 tacaacatccagaaggagtccacccttcacctggtgctccgccttcgtggtggcatgcag 60 Query: 220 atctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctggacacc 279 ||||| ||||| |||||| ||||||||||||| ||| |||||||||| | | |||||| Sbjct: 61 atcttcgtgaagaccctgacgggcaagaccatcacactggaggtggagtcctctgacacc 120 Query: 280 atccacancgtnaaggcgaagatccaggacanggganggtntccctncggaccagcagca 339 ||| ||| ||| ||||||||||||||||||| ||| || ||||| |||||||||||| Sbjct: 121 atcgacaacgtcaaggcgaagatccaggacaa-ggagggcatccctccggaccagcagc- 178 Query: 340 gcctcatcttcgctggcaa 358 |||||||||| |||||||| Sbjct: 179 gcctcatctttgctggcaa 197
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 270 bits (136), Expect = 3e-69 Identities = 252/298 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 794 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 853 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 854 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 913 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 914 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 973 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 974 gtgctccgccttcgtggtggtatgcagatctttgtcaagaccctcacaggcaagaccatc 1033 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 1034 accctggaggttgagagctcggacaccatcgacaacgtcaaggccaagatccaggaca 1091 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 338 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 397 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 398 atccaggacaaagagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 457 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 458 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 517 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 518 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 577 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 578 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 635 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 566 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 625 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 626 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 685 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 686 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 744 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 110 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 169 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 170 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 229 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 230 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 289 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 290 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 349 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 350 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 407 Score = 192 bits (97), Expect = 6e-46 Identities = 208/251 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||| ||| Sbjct: 1022 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1081 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 1082 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 1141 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 1142 ctcgaggatggccgcaccctcgccgactacaacatccagaaggagtctaccctccacctg 1201 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || | ||||||||||| ||||| ||| || | || |||||||| Sbjct: 1202 gtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccttgactgggaagaccatc 1261 Query: 253 acattggaggt 263 || |||||||| Sbjct: 1262 actttggaggt 1272 Score = 141 bits (71), Expect = 2e-30 Identities = 155/185 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||| ||| ||| |||||||| || || | ||||| |||||| Sbjct: 1253 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1312 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1313 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1372 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| || || || || |||||||||||||| |||||||||||||| ||||||| | Sbjct: 1373 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctccacctggtg 1432 Query: 196 ctccg 200 ||||| Sbjct: 1433 ctccg 1437 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 195 cggaccagcagc-gtctcatcttcgctggcaa 225
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 270 bits (136), Expect = 3e-69 Identities = 252/298 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 791 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 850 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 851 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 910 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 911 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 970 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 971 gtgctccgccttcgtggtggtatgcagatctttgtcaagaccctcacaggcaagaccatc 1030 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 1031 accctggaggttgagagctcggacaccatcgacaacgtcaaggccaagatccaggaca 1088 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 335 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 394 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 395 atccaggacaaagagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 454 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 455 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 514 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 515 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 574 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 575 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 632 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 563 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 622 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 623 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 682 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 683 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 741 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 107 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 166 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 167 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 226 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 227 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 286 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 287 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 346 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 347 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 404 Score = 192 bits (97), Expect = 6e-46 Identities = 208/251 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||| ||| Sbjct: 1019 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1078 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 1079 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 1138 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 1139 ctcgaggatggccgcaccctcgccgactacaacatccagaaggagtctaccctccacctg 1198 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || | ||||||||||| ||||| ||| || | || |||||||| Sbjct: 1199 gtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccttgactgggaagaccatc 1258 Query: 253 acattggaggt 263 || |||||||| Sbjct: 1259 actttggaggt 1269 Score = 141 bits (71), Expect = 2e-30 Identities = 155/185 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||| ||| ||| |||||||| || || | ||||| |||||| Sbjct: 1250 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1309 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1310 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1369 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| || || || || |||||||||||||| |||||||||||||| ||||||| | Sbjct: 1370 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctccacctggtg 1429 Query: 196 ctccg 200 ||||| Sbjct: 1430 ctccg 1434 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 192 cggaccagcagc-gtctcatcttcgctggcaa 222
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 270 bits (136), Expect = 3e-69 Identities = 252/298 (84%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 3341304 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 3341245 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 3341244 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 3341185 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 3341184 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 3341125 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 3341124 gtgctccgccttcgtggtggtatgcagatctttgtcaagaccctcacaggcaagaccatc 3341065 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3341064 accctggaggttgagagctcggacaccatcgacaacgtcaaggccaagatccaggaca 3341007 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 3341760 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 3341701 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 3341700 atccaggacaaagagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 3341641 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 3341640 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 3341581 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 3341580 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 3341521 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3341520 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 3341463 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 3341532 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 3341473 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 3341472 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 3341413 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 3341412 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 3341354 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 3341988 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 3341929 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 3341928 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 3341869 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 3341868 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 3341809 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 3341808 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 3341749 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3341748 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 3341691 Score = 192 bits (97), Expect = 6e-46 Identities = 208/251 (82%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||| ||| Sbjct: 3341076 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 3341017 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 3341016 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 3340957 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 3340956 ctcgaggatggccgcaccctcgccgactacaacatccagaaggagtctaccctccacctg 3340897 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || | ||||||||||| ||||| ||| || | || |||||||| Sbjct: 3340896 gtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccttgactgggaagaccatc 3340837 Query: 253 acattggaggt 263 || |||||||| Sbjct: 3340836 actttggaggt 3340826 Score = 141 bits (71), Expect = 2e-30 Identities = 119/137 (86%) Strand = Plus / Minus Query: 64 aaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgct 123 ||||| |||||||| ||||||||||| ||| |||| |||||||||||||| ||||| ||| Sbjct: 3340797 aaggccaagatccaggacaaggaggggattcccccagaccagcagcgtctgatcttcgct 3340738 Query: 124 ggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtccacc 183 |||||||| || || ||||| || || || || |||||||||||||| |||||||||||| Sbjct: 3340737 ggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaaggagtccacc 3340678 Query: 184 ctncacctggagctccg 200 || ||||||| |||||| Sbjct: 3340677 ctccacctggtgctccg 3340661 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 3341903 cggaccagcagc-gtctcatcttcgctggcaa 3341873
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 270 bits (136), Expect = 3e-69 Identities = 252/298 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 3497 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 3556 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 3557 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 3616 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 3617 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 3676 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 3677 gtgctccgccttcgtggtggtatgcagatctttgtcaagaccctcacaggcaagaccatc 3736 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3737 accctggaggttgagagctcggacaccatcgacaacgtcaaggccaagatccaggaca 3794 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 3041 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 3100 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 3101 atccaggacaaagagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 3160 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 3161 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 3220 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 3221 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 3280 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3281 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 3338 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 3269 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 3328 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 3329 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 3388 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 3389 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 3447 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 2813 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 2872 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 2873 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 2932 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 2933 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 2992 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 2993 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 3052 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3053 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 3110 Score = 200 bits (101), Expect = 2e-48 Identities = 209/251 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||| ||| Sbjct: 3725 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 3784 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 3785 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 3844 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| |||||||| ||||| |||||| Sbjct: 3845 ctcgaggatggccgcacccttgccgactacaacatccagaaggagtctaccctccacctg 3904 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || | ||||||||||| ||||| ||| || | || |||||||| Sbjct: 3905 gtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccttgactgggaagaccatc 3964 Query: 253 acattggaggt 263 || |||||||| Sbjct: 3965 actttggaggt 3975 Score = 141 bits (71), Expect = 2e-30 Identities = 155/185 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||| ||| ||| |||||||| || || | ||||| |||||| Sbjct: 3956 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 4015 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||| |||||||||||||| ||||| ||||||||||| || Sbjct: 4016 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 4075 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| || || || || |||||||||||||| |||||||||||||| ||||||| | Sbjct: 4076 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctccacctggtg 4135 Query: 196 ctccg 200 ||||| Sbjct: 4136 ctccg 4140 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 2898 cggaccagcagc-gtctcatcttcgctggcaa 2928
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 270 bits (136), Expect = 3e-69 Identities = 252/298 (84%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 90164 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 90105 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 90104 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 90045 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 90044 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 89985 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 89984 gtgctccgccttcgtggtggtatgcagatctttgtcaagaccctcacaggcaagaccatc 89925 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 89924 accctggaggttgagagctcggacaccatcgacaacgtcaaggccaagatccaggaca 89867 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 90620 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 90561 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 90560 atccaggacaaagagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 90501 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 90500 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 90441 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 90440 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 90381 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 90380 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 90323 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 90392 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 90333 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 90332 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 90273 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 90272 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 90214 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 90848 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 90789 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 90788 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 90729 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 90728 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 90669 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 90668 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 90609 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 90608 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 90551 Score = 192 bits (97), Expect = 6e-46 Identities = 208/251 (82%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||| ||| Sbjct: 89936 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 89877 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 89876 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 89817 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 89816 ctcgaggatggccgcaccctcgccgactacaacatccagaaggagtctaccctccacctg 89757 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || | ||||||||||| ||||| ||| || | || |||||||| Sbjct: 89756 gtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccttgactgggaagaccatc 89697 Query: 253 acattggaggt 263 || |||||||| Sbjct: 89696 actttggaggt 89686 Score = 141 bits (71), Expect = 2e-30 Identities = 119/137 (86%) Strand = Plus / Minus Query: 64 aaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgct 123 ||||| |||||||| ||||||||||| ||| |||| |||||||||||||| ||||| ||| Sbjct: 89657 aaggccaagatccaggacaaggaggggattcccccagaccagcagcgtctgatcttcgct 89598 Query: 124 ggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtccacc 183 |||||||| || || ||||| || || || || |||||||||||||| |||||||||||| Sbjct: 89597 ggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaaggagtccacc 89538 Query: 184 ctncacctggagctccg 200 || ||||||| |||||| Sbjct: 89537 ctccacctggtgctccg 89521 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 90763 cggaccagcagc-gtctcatcttcgctggcaa 90733
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 270 bits (136), Expect = 3e-69 Identities = 252/298 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 794 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 853 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 854 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 913 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 914 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 973 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 974 gtgctccgccttcgtggtggtatgcagatctttgtcaagaccctcacaggcaagaccatc 1033 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 1034 accctggaggttgagagctcggacaccatcgacaacgtcaaggccaagatccaggaca 1091 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 338 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 397 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 398 atccaggacaaagagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 457 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 458 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 517 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 518 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 577 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 578 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 635 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 566 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 625 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 626 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 685 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 686 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 744 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 110 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 169 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 170 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 229 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 230 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 289 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 290 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 349 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 350 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 407 Score = 192 bits (97), Expect = 6e-46 Identities = 208/251 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||| ||| Sbjct: 1022 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1081 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 1082 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 1141 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 1142 ctcgaggatggccgcaccctcgccgactacaacatccagaaggagtctaccctccacctg 1201 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || | ||||||||||| ||||| ||| || | || |||||||| Sbjct: 1202 gtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccttgactgggaagaccatc 1261 Query: 253 acattggaggt 263 || |||||||| Sbjct: 1262 actttggaggt 1272 Score = 141 bits (71), Expect = 2e-30 Identities = 155/185 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||| ||| ||| |||||||| || || | ||||| |||||| Sbjct: 1253 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1312 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1313 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1372 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| || || || || |||||||||||||| |||||||||||||| ||||||| | Sbjct: 1373 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctccacctggtg 1432 Query: 196 ctccg 200 ||||| Sbjct: 1433 ctccg 1437 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 195 cggaccagcagc-gtctcatcttcgctggcaa 225
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 270 bits (136), Expect = 3e-69 Identities = 252/298 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 791 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 850 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 851 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 910 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 911 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 970 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 971 gtgctccgccttcgtggtggtatgcagatctttgtcaagaccctcacaggcaagaccatc 1030 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 1031 accctggaggttgagagctcggacaccatcgacaacgtcaaggccaagatccaggaca 1088 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 563 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 622 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 623 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 682 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 683 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 741 Score = 222 bits (112), Expect = 6e-55 Identities = 246/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 335 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 394 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| ||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 395 atccaggacaaagagggcacccccccagaccagcagcgtctcatcttcgccggcaagcag 454 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 455 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 514 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 515 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 574 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 575 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 632 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 107 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 166 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 167 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 226 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 227 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 286 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 287 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 346 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 347 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 404 Score = 192 bits (97), Expect = 6e-46 Identities = 208/251 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| ||| |||||||||||||||| |||||| ||| Sbjct: 1019 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1078 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 1079 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 1138 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 1139 ctcgaggatggccgcaccctcgccgactacaacatccagaaggagtctaccctccacctg 1198 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || | ||||||||||| ||||| ||| || | || |||||||| Sbjct: 1199 gtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccttgactgggaagaccatc 1258 Query: 253 acattggaggt 263 || |||||||| Sbjct: 1259 actttggaggt 1269 Score = 141 bits (71), Expect = 2e-30 Identities = 155/185 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||| ||| ||| |||||||| || || | ||||| |||||| Sbjct: 1250 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1309 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||| |||||||||||||| ||||| ||||||||||| || Sbjct: 1310 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1369 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| || || || || |||||||||||||| |||||||||||||| ||||||| | Sbjct: 1370 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctccacctggtg 1429 Query: 196 ctccg 200 ||||| Sbjct: 1430 ctccg 1434 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 192 cggaccagcagc-gtctcatcttcgctggcaa 222
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 264 bits (133), Expect = 2e-67 Identities = 287/346 (82%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||||||||||||||| ||||| | ||||||||| Sbjct: 4400 ggcaagaccatcaccctggaggtggagtcctctgacaccattgacaatgtgaaggcgaag 4459 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 4460 atccaggataaggagggcatccccccggaccagcagcgtyttatctttgctggcaagcag 4519 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || || || || ||||||||||| |||||||||||||| |||||| Sbjct: 4520 cttgaggatggccgcaccctggcagantacaacatccagaaggagtccacccttcacctg 4579 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||| || || || ||||| | ||||||||||| Sbjct: 4580 gtgctccgccttcgcggtggtatgcagatyttcgtcaagaccctcaccggcaagaccatc 4639 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||||| | | ||||||||| ||| || ||||||||||||||||||| Sbjct: 4640 accctggaggtggagtcctctgacaccatcgacaatgtgaaggcgaagatccaggacaa- 4698 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || |||| |||||||||||| | ||||||||||| ||||| Sbjct: 4699 ggagggcatccccccggaccagcagc-gtctcatcttcgccggcaa 4743 Score = 228 bits (115), Expect = 1e-56 Identities = 244/296 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | |||||||||||||| |||||||| ||||| | ||||||||| Sbjct: 4172 ggcaagaccatcaccttggaggtggagtcctcggacaccattgacaatgtgaaggcgaag 4231 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||||||||||||||||||||| || || |||||||| Sbjct: 4232 atccaggacaaggagggcatccccccggaccagcagcgtctcatyttcgccggcaagcar 4291 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || ||||| || ||||||||||| || ||||||||||| |||||| Sbjct: 4292 cttgaggatggccgcacccttgcggantacaacatccagaargagtccacccttcacctg 4351 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| |||| |||||||| || || || ||||| | ||||||||||| Sbjct: 4352 gtgctccgccttcgtggtggtatgcagattttcgtcaagaccctcaccggcaagaccatc 4411 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccagga 308 || |||||||||| | | |||||||| ||| || ||||||||||||||||| Sbjct: 4412 accctggaggtggagtcctctgacaccattgacaatgtgaaggcgaagatccagga 4467 Score = 226 bits (114), Expect = 4e-56 Identities = 168/188 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| Sbjct: 4628 ggcaagaccatcaccctggaggtggagtcctctgacaccatcgacaatgtgaaggcgaag 4687 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||| Sbjct: 4688 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgccggcaagcag 4747 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| ||||||||||| || |||||| Sbjct: 4748 ctggaggatggccgcaccctggcagactacaacatccagaaggagtccactctccacctg 4807 Query: 193 gagctccg 200 | |||||| Sbjct: 4808 gtgctccg 4815 Score = 206 bits (104), Expect = 4e-50 Identities = 291/361 (80%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||| |||||||| ||||| |||||||| |||||||||| ||||| ||| Sbjct: 3944 ggcaagactatcacgcttgaggtcgagtcttctgacacgatcgacaacgtgaaggccaag 4003 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || ||||||||||||||||| |||| || ||||||||||| Sbjct: 4004 atccaggacaaggagggaatccccccggaccagcagcgtytcattttcgctggcaagcag 4063 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || ||||||||||||||||| |||||||| || || ||||| Sbjct: 4064 ctcgaggatggccgcaccctcgctgactacaacatccagaaggagtcgactctccacctt 4123 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||| | || ||||||||||| || || ||||| | ||||||||||| Sbjct: 4124 gtgctcaggctcaggggtggcatgcagatcttcgtcaagaccctcactggcaagaccatc 4183 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||||||| | | ||||||||| ||| || ||||||||||||||||||| Sbjct: 4184 accttggaggtggagtcctcggacaccattgacaatgtgaaggcgaagatccaggacaa- 4242 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatg 372 ||| || |||| |||||||||||| | ||||| ||||| ||||| || ||||||||| Sbjct: 4243 ggagggcatccccccggaccagcagc-gtctcatyttcgccggcaagcarcttgaggatg 4301 Query: 373 g 373 | Sbjct: 4302 g 4302 Score = 186 bits (94), Expect = 3e-44 Identities = 161/186 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| |||||||| ||||| || ||||| | |||||| ||| Sbjct: 3716 ggcaagaccatcacccttgaggttgagtcctcagacactattgacaatgtcaaggctaag 3775 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| |||||| | || || |||||| | || || |||||||||||||| Sbjct: 3776 atccaggacaaggaaggcattcctccagatcagcagaggctgatytttgctggcaagcag 3835 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| || ||||||||||||||||| |||||||||||||| |||||| Sbjct: 3836 ctcgaggatggccgtaccctagctgactacaacatccagaaggagtccaccctccacctg 3895 Query: 193 gagctc 198 | |||| Sbjct: 3896 gtgctc 3901
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 252 bits (127), Expect = 7e-64 Identities = 166/181 (91%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||| Sbjct: 321 ggcaagaccatcacgcttgaggtggagtcctcggacaccatcgacaacgtgaaggccaag 380 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| Sbjct: 381 atccaggacaaggagggcattcccccggaccagcagcgtctcatcttcgctgggaagcag 440 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || |||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 441 cttgaggacggccgtacccttgctgactacaacatccagaaggagtccaccctccacctg 500 Query: 193 g 193 | Sbjct: 501 g 501 Score = 240 bits (121), Expect = 3e-60 Identities = 163/179 (91%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| Sbjct: 777 ggcaagaccatcacccttgaggtggagtcctcggacaccatcgacaacgtgaaggccaag 836 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 837 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 896 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 897 cttgaggatggccgcaccctcgccgactacaacatccagaaggagtccaccctccacct 955 Score = 216 bits (109), Expect = 4e-53 Identities = 160/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||| Sbjct: 549 ggcaagaccatcacgcttgaggtggagtcctcggacaccatcgacaacgtgaaggccaag 608 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| ||||| | ||||||||||||||||||||||| ||||| ||||| Sbjct: 609 atccaggacaaggaaggcatccctccggaccagcagcgtctcatcttcgctgggaagcag 668 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || |||||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 669 cttgaggacggccgtacccttgctgattacaacatccagaaggagtccaccctccacct 727 Score = 208 bits (105), Expect = 9e-51 Identities = 159/179 (88%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| |||||||| || ||||| ||||||| |||||| ||| Sbjct: 93 ggcaagaccatcaccctcgaggttgagtcctcggataccattgacaacgtcaaggcaaag 152 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || ||||||||||||||||||||||||| ||||| ||||| Sbjct: 153 atccaggacaaggagggaatccccccggaccagcagcgtctcatcttcgctgggaagcag 212 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || |||||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 213 cttgaggacggccgtacccttgctgattacaacatccagaaggagtccaccctccacct 271 Score = 204 bits (103), Expect = 1e-49 Identities = 160/181 (88%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||| ||| Sbjct: 1005 ggcaagaccatcaccctggaggtggagtcatctgacaccatcgacaatgttaaggcaaag 1064 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| Sbjct: 1065 atccaggacaaggagggcatcccgccggaccagcagcgtctgatctttgctggcaagcag 1124 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || || ||||||||||| |||||||||||||| |||||| Sbjct: 1125 ctggaggatggccgcaccctggcggattacaacatccagaaggagtccaccctccacctg 1184 Query: 193 g 193 | Sbjct: 1185 g 1185 Score = 103 bits (52), Expect = 4e-19 Identities = 132/160 (82%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | ||||||||||| || | |||||||| | | | Sbjct: 750 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggtggagtcctcg 809 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 810 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggagggcatccccccggacca 868 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | ||||||||||||||||| || |||||||||| Sbjct: 869 gcagc-gtctcatcttcgctggcaagcagcttgaggatgg 907 Score = 89.7 bits (45), Expect = 6e-15 Identities = 117/142 (82%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| ||||| | ||||||||||| || | |||||||| | | | Sbjct: 522 atgcagatcttcgtgaagaccctcaccggcaagaccatcacgcttgaggtggagtcctcg 581 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || ||||| ||||||| Sbjct: 582 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggaaggcatccctccggacca 640 Query: 334 gcagcagcctcatcttcgctgg 355 ||||| | |||||||||||||| Sbjct: 641 gcagc-gtctcatcttcgctgg 661 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/142 (80%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| ||||| | ||||||||||| || | |||||||| | | | Sbjct: 294 atgcagatcttcgtgaagaccctcaccggcaagaccatcacgcttgaggtggagtcctcg 353 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || | || ||||||| Sbjct: 354 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggagggcattcccccggacca 412 Query: 334 gcagcagcctcatcttcgctgg 355 ||||| | |||||||||||||| Sbjct: 413 gcagc-gtctcatcttcgctgg 433 Score = 50.1 bits (25), Expect = 0.005 Identities = 112/142 (78%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| || || ||||| | ||||||||||| || | ||||| || | | | Sbjct: 66 atgcagatcttcgtaaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg 125 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 || ||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 126 gataccattgacaacgtcaaggcaaagatccaggacaa-ggagggaatccccccggacca 184 Query: 334 gcagcagcctcatcttcgctgg 355 ||||| | |||||||||||||| Sbjct: 185 gcagc-gtctcatcttcgctgg 205 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||| ||||| || ||||| | ||||||||||| || |||||||||| | Sbjct: 978 atgcagatttttgtcaagaccctcactggcaagaccatcaccctggaggtggagtcatct 1037 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||| ||||||||||||| Sbjct: 1038 gacaccatcgacaatgttaaggcaaagatccaggaca 1074
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 240 bits (121), Expect = 3e-60 Identities = 295/358 (82%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 745 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctcggacacgatcgacaac 803 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 804 gtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttt 863 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || |||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 864 gctggcaagcagctggaggatggccgcacccttgccgactacaacatccagaaggagtcc 923 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | |||| | || ||||||||||| || || |||||| | Sbjct: 924 accctccaccttgtgctcaggctcaggggtggtatgcagatcttcgtcaagaccctgacc 983 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | |||||| ||| ||| || ||||| ||| Sbjct: 984 ggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaatgtgaaggccaag 1043 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| |||| |||||||||||| | ||||||||||| ||||| Sbjct: 1044 atccaggacaa-ggagggtatccccccggaccagcagc-gtctcatcttcgccggcaa 1099 Score = 232 bits (117), Expect = 6e-58 Identities = 162/179 (90%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 300 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 359 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 360 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 419 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 420 cttgaggatggccgcaccctggctgactacaacatccagaaggagtccaccctccacct 478 Score = 230 bits (116), Expect = 3e-57 Identities = 284/346 (82%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 528 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 587 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 588 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 647 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 648 ctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacctt 707 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||| | || ||||||||||| || || |||||| | ||||||||||| Sbjct: 708 gtgctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatc 767 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | ||||| || | | |||||| ||| ||| ||| ||||| ||||||||||||| Sbjct: 768 accctcgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaa- 826 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || |||| |||||||||||| | |||||||| |||||||| Sbjct: 827 ggagggcatccccccggaccagcagc-gtctcatctttgctggcaa 871 Score = 218 bits (110), Expect = 1e-53 Identities = 161/180 (89%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 |||||||||||||||||| ||||| |||||||| |||||||| ||||| | |||||| || Sbjct: 71 gggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggccaa 130 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 131 gatccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagca 190 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 191 gcttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacct 250 Score = 190 bits (96), Expect = 2e-45 Identities = 168/193 (87%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 973 agaccctgaccgg-caagaccatcacgcttgaggtcgagtcctcggacacgatcgacaat 1031 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct: 1032 gtgaaggccaagatccaggacaaggagggtatccccccggaccagcagcgtctcatcttc 1091 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 1092 gccggcaagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtcc 1151 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1152 acccttcacctgg 1164 Score = 182 bits (92), Expect = 5e-43 Identities = 167/193 (86%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 1201 agaccctgactgg-caagaccattacccttgaggttgagtcgtccgacactattgacaac 1259 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 1260 gtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctgatcttt 1319 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| |||||||| || | || || ||||||||||| ||||||||| Sbjct: 1320 gctggtaagcagcttgaggatggccgcaccttggcggattacaacatccagaaggagtcc 1379 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 1380 acactccacctgg 1392 Score = 87.7 bits (44), Expect = 2e-14 Identities = 130/160 (81%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| ||||||||||||| || | ||||| || | | | Sbjct: 45 atgcagatctttgtgaagaccctcacgggcaagaccatcaccctcgaggttgagtcctcg 104 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 105 gacaccattgacaatgtcaaggccaagatccaggacaa-ggagggcatccccccggacca 163 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | ||||||||||||||||| || |||||||||| Sbjct: 164 gcagc-gtctcatcttcgctggcaagcagcttgaggatgg 202 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 292 aaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctcatcttcg 351 ||||| ||||||||||||| || | || |||| |||||||||||| | |||||||||| Sbjct: 351 aaggccaagatccaggacaagg-agggcatccccccggaccagcagc-gtctcatcttcg 408 Query: 352 ctggcaancattttgaggatgg 373 ||||||| || |||||||||| Sbjct: 409 ctggcaagcagcttgaggatgg 430 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | ||||| || | Sbjct: 1185 atgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtcc 1244 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||| || ||| ||| ||||||||||||||||||| Sbjct: 1245 gacactattgacaacgtgaaggcgaagatccaggaca 1281
>gb|BT016665.1| Zea mays clone Contig498 mRNA sequence Length = 1012 Score = 232 bits (117), Expect = 6e-58 Identities = 245/295 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 337 aagactatcaccctcgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatc 396 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| | |||||||||||||| || ||||||||||||||||| || Sbjct: 397 caggacaaggagggcatccctccggaccagcagcgcctgatctttgctggcaagcagctg 456 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||||||||| || || |||||||||||||| |||||| |||||| ||||||| | Sbjct: 457 gaggatggccgtaccctcgccgactacaacatccagaaggagagcaccctccacctggtg 516 Query: 196 ctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnaca 255 ||||| | | ||||||||||||||||| ||| || | ||||||||||| || Sbjct: 517 ctccgcttgcgaggtggtatgcagatctttgtgaagaccttgactggcaagaccataacc 576 Query: 256 ttggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||| || | ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 577 ctggaggttgagagctccgacaccatcgacaacgtgaaggcgaagatccaggaca 631 Score = 194 bits (98), Expect = 1e-46 Identities = 155/176 (88%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| Sbjct: 109 aagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatc 168 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| |||||||||||||||| |||||||| ||||||||||| || Sbjct: 169 caggacaaggaaggcattcccccggaccagcagcggctcatcttcgctggcaagcagctc 228 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || || |||||||| |||||||||||||| |||||| |||||| ||||| Sbjct: 229 gaggacgggcgcacacttgccgactacaacatccagaaggagagcaccctccacct 284 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| ||| |||||||||||||||| ||||||||| Sbjct: 562 ggcaagaccataaccctggaggttgagagctccgacaccatcgacaacgtgaaggcgaag 621 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||| ||||| || |||||||| Sbjct: 622 atccaggacaaagagggcatccccccagaccagcagcgtctgatcttcgccggcaagcag 681 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| ||| || |||||| Sbjct: 682 ctggaggatggccgcaccctagcagactacaacatccagaaggagagcactctccacctg 741 Query: 193 gagctccg 200 | |||||| Sbjct: 742 gtgctccg 749 Score = 61.9 bits (31), Expect = 1e-06 Identities = 72/85 (84%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || ||||| ||||||| Sbjct: 367 gacaccatcgacaacgtcaaggccaagatccaggacaa-ggagggcatccctccggacca 425 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| |||| ||||| |||||||| Sbjct: 426 gcagc-gcctgatctttgctggcaa 449 Score = 46.1 bits (23), Expect = 0.081 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| || | | |||| ||||||| Sbjct: 139 gacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattccc-ccggacca 197 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| || |||||||||||||||| Sbjct: 198 gcagcggc-tcatcttcgctggcaa 221
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 232 bits (117), Expect = 6e-58 Identities = 294/358 (82%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 28019860 agaccctgactgg-caagaccatcacacttgaggtcgagtcctcggacacgatcgacaat 28019918 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 28019919 gtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttc 28019978 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || || ||||| || ||||| |||||||||||||| ||||||||| Sbjct: 28019979 gctggcaagcagctggaggacggccgcacccttgccgactacaacatccagaaggagtcc 28020038 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | |||| | || ||||||||||| || || |||||| | Sbjct: 28020039 accctccaccttgtgctcaggctcaggggtggtatgcagatcttcgtcaagaccctgacc 28020098 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | |||||| ||| ||| ||| ||||| ||| Sbjct: 28020099 ggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaacgtgaaggccaag 28020158 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| |||| |||||||||||| ||||||||||||| ||||| Sbjct: 28020159 atccaggacaa-ggagggtatccccccggaccagcagc-gcctcatcttcgccggcaa 28020214 Score = 230 bits (116), Expect = 3e-57 Identities = 284/346 (82%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 28019415 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 28019474 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 28019475 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 28019534 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 28019535 ctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacctt 28019594 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||| | || ||||||||||| || || |||||| | ||||||||||| Sbjct: 28019595 gtgctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatc 28019654 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | ||||| || | | |||||| ||| ||| ||| ||||| ||||||||||||| Sbjct: 28019655 accctcgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaa- 28019713 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || |||| |||||||||||| | ||||||||||| ||||| Sbjct: 28019714 ggagggcatccccccggaccagcagc-gtctcatcttcgccggcaa 28019758 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| |||||||| |||||||| ||||| | |||||| ||| Sbjct: 28018959 ggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggccaag 28019018 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 28019019 atccaggacaaggagggcatccccccggaccagcagcgtctcatctttgctggcaagcag 28019078 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 28019079 cttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacct 28019137 Score = 216 bits (109), Expect = 4e-53 Identities = 160/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 28019187 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 28019246 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 28019247 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 28019306 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||| ||||| ||||| Sbjct: 28019307 cttgaggatggccgcaccctggccgactacaacatccagaaggagtctaccctccacct 28019365 Score = 204 bits (103), Expect = 1e-49 Identities = 175/200 (87%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 28020316 agaccctgactgg-caagaccattacccttgaggttgagtcgtccgacactattgacaac 28020374 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 28020375 gtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctgatcttt 28020434 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| |||||||| || ||||| || ||||||||||| ||||||||| Sbjct: 28020435 gctggtaagcagcttgaggatggccgcacccttgcggattacaacatccagaaggagtcc 28020494 Query: 181 accctncacctggagctccg 200 || || ||||||| |||||| Sbjct: 28020495 acactccacctggtgctccg 28020514 Score = 194 bits (98), Expect = 1e-46 Identities = 167/191 (87%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 28019632 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctcggacacgatcgacaac 28019690 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 28019691 gtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttc 28019750 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || ||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 28019751 gccggcaagcagctggaggacggccgcacccttgccgactacaacatccagaaggaatcc 28019810 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 28019811 accctccacct 28019821 Score = 190 bits (96), Expect = 2e-45 Identities = 168/193 (87%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| ||||||||| Sbjct: 28020088 agaccctgaccgg-caagaccatcacgcttgaggtcgagtcctcggacacgatcgacaac 28020146 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||| || |||||||||||||||| |||||||| Sbjct: 28020147 gtgaaggccaagatccaggacaaggagggtatccccccggaccagcagcgcctcatcttc 28020206 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 28020207 gccggcaagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtcc 28020266 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 28020267 acccttcacctgg 28020279 Score = 168 bits (85), Expect = 8e-39 Identities = 154/179 (86%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||||||||| || || ||||| | ||||| ||| Sbjct: 27575647 ggcaagaccatcaccctcgaggttgagtcctctgatacaattgacaatgtgaaggccaag 27575588 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || ||||||||||||||| | || |||||||| ||||||||||||||||||||||| Sbjct: 27575587 attcaggacaaggagggcattccacctgaccagcaacgtctcatctttgctggcaagcaa 27575528 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || || || || ||||||||||| |||||||||||||| ||||| Sbjct: 27575527 ctagaggatggccgcaccctcgcggattacaacatccagaaggagtccaccctccacct 27575469 Score = 165 bits (83), Expect = 1e-37 Identities = 158/185 (85%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| |||| ||| |||||||| |||| |||||||| | ||||||||||| Sbjct: 27575416 aagaccatcactcttgcggtcgagtcctcggacaagatcgacaatgtgaaggcgaagatt 27575357 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||||||||||||||| ||||||||||| | |||||| || Sbjct: 27575356 caggacaaggagggaattcccccggaccagcagcgcctcatctttgcagacaagcagctc 27575297 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| |||||||| ||||| |||||||| || |||||||||||| | ||||||| | Sbjct: 27575296 gaggatggacgtacactggctgattacaacattcagaaggagtccaccttgcacctggtg 27575237 Query: 196 ctccg 200 ||||| Sbjct: 27575236 ctccg 27575232 Score = 71.9 bits (36), Expect = 1e-09 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| || || |||||| | ||||||||||| ||| | ||||| || | | | Sbjct: 28019844 atgcagatcttcgtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcg 28019903 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 28019904 gacacgatcgacaatgtgaaggccaagatccaggacaa-ggagggcatccccccggacca 28019962 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||||||||| Sbjct: 28019963 gcagc-gtctcatcttcgctggcaa 28019986 Score = 71.9 bits (36), Expect = 1e-09 Identities = 128/160 (80%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | ||||||||||| || | ||||| || | | | Sbjct: 28018932 atgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg 28018991 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 28018992 gacaccattgacaatgtcaaggccaagatccaggacaa-ggagggcatccccccggacca 28019050 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||| |||||||| || |||||||||| Sbjct: 28019051 gcagc-gtctcatctttgctggcaagcagcttgaggatgg 28019089 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 292 aaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctcatcttcg 351 ||||| ||||||||||||| || | || |||| |||||||||||| | |||||||||| Sbjct: 28019238 aaggccaagatccaggacaagg-agggcatccccccggaccagcagc-gtctcatcttcg 28019295 Query: 352 ctggcaancattttgaggatgg 373 ||||||| || |||||||||| Sbjct: 28019296 ctggcaagcagcttgaggatgg 28019317 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | ||||| || | Sbjct: 28020300 atgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtcc 28020359 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||| || ||| ||| ||||||||||||||||||| Sbjct: 28020360 gacactattgacaacgtgaaggcgaagatccaggaca 28020396 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| || || | ||||||||||| Sbjct: 27575674 atgcagatctttgtgaagacactcactggcaagaccat 27575637 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| ||| || | || |||||||| Sbjct: 27575446 atgcagatctttgtgaagaccttgacaggaaagaccat 27575409 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 46 gacaccatcgacaacgacaaggcgaagatcca 77 |||||||||||||| | |||||| |||||||| Sbjct: 26202113 gacaccatcgacaatgtcaaggccaagatcca 26202144 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| || ||| |||| |||||||| Sbjct: 26202053 atgcagatcttcgtgaagacgctgacggggaagaccat 26202090
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 232 bits (117), Expect = 6e-58 Identities = 305/373 (81%), Gaps = 3/373 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 2402 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctcggacacgatcgacaat 2460 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | || || |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 2461 gtgaaagccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttt 2520 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || |||||||| || ||||| |||||||||||||| ||||||||| Sbjct: 2521 gctggcaagcagctggaggatggccgcacccttgccgactacaacatccagaaggagtcc 2580 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | |||| | || ||||||||||| || || |||||| | Sbjct: 2581 accctccaccttgtgctcaggctcaggggtggtatgcagatcttcgtcaagaccctgacc 2640 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | |||||| ||| ||| || ||||| ||| Sbjct: 2641 ggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaatgtgaaggccaag 2700 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaanc 360 |||||||||| ||| ||| |||| |||||||||||| | ||||||||||| ||||| | Sbjct: 2701 atccaggacaa-ggagggtatccccccggaccagcagc-gtctcatcttcgccggcaagc 2758 Query: 361 attttgaggatgg 373 | |||||||||| Sbjct: 2759 agcttgaggatgg 2771 Score = 232 bits (117), Expect = 6e-58 Identities = 162/179 (90%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 1957 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 2016 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 2017 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 2076 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 2077 cttgaggatggccgcaccctggctgactacaacatccagaaggagtccaccctccacct 2135 Score = 216 bits (109), Expect = 4e-53 Identities = 160/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| |||||||| |||||||| ||||| | |||||| ||| Sbjct: 1729 ggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggccaag 1788 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 1789 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 1848 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 1849 cttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacct 1907 Score = 208 bits (105), Expect = 9e-51 Identities = 159/179 (88%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 2185 ggcaagaccatcaccctcgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 2244 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 2245 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 2304 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 2305 ctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacct 2363 Score = 198 bits (100), Expect = 9e-48 Identities = 169/193 (87%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 2630 agaccctgaccgg-caagaccatcacgcttgaggtcgagtcctcggacacgatcgacaat 2688 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct: 2689 gtgaaggccaagatccaggacaaggagggtatccccccggaccagcagcgtctcatcttc 2748 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| ||||| |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 2749 gccggcaagcagcttgaggatggccgcaccttggctgactacaacatccagaaggagtcc 2808 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2809 acccttcacctgg 2821 Score = 182 bits (92), Expect = 5e-43 Identities = 167/193 (86%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 2858 agaccctgactgg-caagaccattacccttgaggttgagtcgtccgacactattgacaac 2916 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 2917 gtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctgatcttt 2976 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| |||||||| || | || || ||||||||||| ||||||||| Sbjct: 2977 gctggtaagcagcttgaggatggccgcaccttggcggattacaacatccagaaggagtcc 3036 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 3037 acactccacctgg 3049 Score = 79.8 bits (40), Expect = 6e-12 Identities = 129/160 (80%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | ||||||||||| || | ||||| || | | | Sbjct: 1702 atgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg 1761 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 1762 gacaccattgacaatgtcaaggccaagatccaggacaa-ggagggcatccccccggacca 1820 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | ||||||||||||||||| || |||||||||| Sbjct: 1821 gcagc-gtctcatcttcgctggcaagcagcttgaggatgg 1859 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 292 aaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctcatcttcg 351 ||||| ||||||||||||| || | || |||| |||||||||||| | |||||||||| Sbjct: 2008 aaggccaagatccaggacaagg-agggcatccccccggaccagcagc-gtctcatcttcg 2065 Query: 352 ctggcaancattttgaggatgg 373 ||||||| || |||||||||| Sbjct: 2066 ctggcaagcagcttgaggatgg 2087 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | ||||| || | Sbjct: 2842 atgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtcc 2901 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||| || ||| ||| ||||||||||||||||||| Sbjct: 2902 gacactattgacaacgtgaaggcgaagatccaggaca 2938
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 232 bits (117), Expect = 6e-58 Identities = 294/358 (82%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 64679 agaccctgactgg-caagaccatcacacttgaggtcgagtcctcggacacgatcgacaat 64737 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 64738 gtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttc 64797 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || || ||||| || ||||| |||||||||||||| ||||||||| Sbjct: 64798 gctggcaagcagctggaggacggccgcacccttgccgactacaacatccagaaggagtcc 64857 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | |||| | || ||||||||||| || || |||||| | Sbjct: 64858 accctccaccttgtgctcaggctcaggggtggtatgcagatcttcgtcaagaccctgacc 64917 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | |||||| ||| ||| ||| ||||| ||| Sbjct: 64918 ggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaacgtgaaggccaag 64977 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| |||| |||||||||||| ||||||||||||| ||||| Sbjct: 64978 atccaggacaa-ggagggtatccccccggaccagcagc-gcctcatcttcgccggcaa 65033 Score = 230 bits (116), Expect = 3e-57 Identities = 284/346 (82%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 64234 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 64293 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64294 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 64353 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 64354 ctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacctt 64413 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||| | || ||||||||||| || || |||||| | ||||||||||| Sbjct: 64414 gtgctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatc 64473 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | ||||| || | | |||||| ||| ||| ||| ||||| ||||||||||||| Sbjct: 64474 accctcgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaa- 64532 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || |||| |||||||||||| | ||||||||||| ||||| Sbjct: 64533 ggagggcatccccccggaccagcagc-gtctcatcttcgccggcaa 64577 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| |||||||| |||||||| ||||| | |||||| ||| Sbjct: 63778 ggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggccaag 63837 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 63838 atccaggacaaggagggcatccccccggaccagcagcgtctcatctttgctggcaagcag 63897 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 63898 cttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacct 63956 Score = 216 bits (109), Expect = 4e-53 Identities = 160/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 64006 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 64065 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 64066 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 64125 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||| ||||| ||||| Sbjct: 64126 cttgaggatggccgcaccctggccgactacaacatccagaaggagtctaccctccacct 64184 Score = 204 bits (103), Expect = 1e-49 Identities = 175/200 (87%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 65135 agaccctgactgg-caagaccattacccttgaggttgagtcgtccgacactattgacaac 65193 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 65194 gtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctgatcttt 65253 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| |||||||| || ||||| || ||||||||||| ||||||||| Sbjct: 65254 gctggtaagcagcttgaggatggccgcacccttgcggattacaacatccagaaggagtcc 65313 Query: 181 accctncacctggagctccg 200 || || ||||||| |||||| Sbjct: 65314 acactccacctggtgctccg 65333 Score = 194 bits (98), Expect = 1e-46 Identities = 167/191 (87%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 64451 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctcggacacgatcgacaac 64509 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 64510 gtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttc 64569 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || ||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 64570 gccggcaagcagctggaggacggccgcacccttgccgactacaacatccagaaggaatcc 64629 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 64630 accctccacct 64640 Score = 190 bits (96), Expect = 2e-45 Identities = 168/193 (87%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| ||||||||| Sbjct: 64907 agaccctgaccgg-caagaccatcacgcttgaggtcgagtcctcggacacgatcgacaac 64965 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||| || |||||||||||||||| |||||||| Sbjct: 64966 gtgaaggccaagatccaggacaaggagggtatccccccggaccagcagcgcctcatcttc 65025 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 65026 gccggcaagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtcc 65085 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 65086 acccttcacctgg 65098 Score = 71.9 bits (36), Expect = 1e-09 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| || || |||||| | ||||||||||| ||| | ||||| || | | | Sbjct: 64663 atgcagatcttcgtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcg 64722 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 64723 gacacgatcgacaatgtgaaggccaagatccaggacaa-ggagggcatccccccggacca 64781 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||||||||| Sbjct: 64782 gcagc-gtctcatcttcgctggcaa 64805 Score = 71.9 bits (36), Expect = 1e-09 Identities = 128/160 (80%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | ||||||||||| || | ||||| || | | | Sbjct: 63751 atgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg 63810 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 63811 gacaccattgacaatgtcaaggccaagatccaggacaa-ggagggcatccccccggacca 63869 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||| |||||||| || |||||||||| Sbjct: 63870 gcagc-gtctcatctttgctggcaagcagcttgaggatgg 63908 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 292 aaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctcatcttcg 351 ||||| ||||||||||||| || | || |||| |||||||||||| | |||||||||| Sbjct: 64057 aaggccaagatccaggacaagg-agggcatccccccggaccagcagc-gtctcatcttcg 64114 Query: 352 ctggcaancattttgaggatgg 373 ||||||| || |||||||||| Sbjct: 64115 ctggcaagcagcttgaggatgg 64136 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | ||||| || | Sbjct: 65119 atgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtcc 65178 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||| || ||| ||| ||||||||||||||||||| Sbjct: 65179 gacactattgacaacgtgaaggcgaagatccaggaca 65215
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 232 bits (117), Expect = 6e-58 Identities = 162/179 (90%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 309 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 368 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 369 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 428 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 429 cttgaggatggccgcaccctggctgactacaacatccagaaggagtccaccctccacct 487 Score = 216 bits (109), Expect = 4e-53 Identities = 160/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| |||||||| |||||||| ||||| | |||||| ||| Sbjct: 81 ggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggccaag 140 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 141 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 200 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 201 cttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacct 259 Score = 214 bits (108), Expect = 2e-52 Identities = 282/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 537 ggcaagaccatcaccctcgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 596 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 597 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 656 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 657 ctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacctt 716 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||| | || ||||||||||| || || |||||| | ||||||||||| Sbjct: 717 gtgctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatc 776 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | ||||| || | | |||||| ||| ||| || || || ||||||||||||| Sbjct: 777 accctcgaggtcgagtcctcggacacgatcgacaatgtgaaagccaagatccaggacaa- 835 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| ||| |||| |||||||||||| | ||||||||||| ||||| Sbjct: 836 ggagggtatccccccggaccagcagc-gtctcatcttcgccggcaa 880 Score = 198 bits (100), Expect = 9e-48 Identities = 169/193 (87%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 982 agaccctgactgg-caagaccattacccttgaggttgagtcgtccgacactattgacaac 1040 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1041 gtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttc 1100 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 1101 gccggcaagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtcc 1160 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1161 acccttcacctgg 1173 Score = 182 bits (92), Expect = 5e-43 Identities = 167/193 (86%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 1210 agaccctgactgg-caagaccattacccttgaggttgagtcgtccgacactattgacaac 1268 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 1269 gtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctgatcttt 1328 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| |||||||| || | || || ||||||||||| ||||||||| Sbjct: 1329 gctggtaagcagcttgaggatggccgcaccttggcggattacaacatccagaaggagtcc 1388 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 1389 acactccacctgg 1401 Score = 182 bits (92), Expect = 5e-43 Identities = 167/193 (86%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 754 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctcggacacgatcgacaat 812 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | || || |||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct: 813 gtgaaagccaagatccaggacaaggagggtatccccccggaccagcagcgtctcatcttc 872 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 873 gccggcaagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtcc 932 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 933 acccttcacctgg 945 Score = 79.8 bits (40), Expect = 6e-12 Identities = 129/160 (80%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | ||||||||||| || | ||||| || | | | Sbjct: 54 atgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg 113 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 114 gacaccattgacaatgtcaaggccaagatccaggacaa-ggagggcatccccccggacca 172 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | ||||||||||||||||| || |||||||||| Sbjct: 173 gcagc-gtctcatcttcgctggcaagcagcttgaggatgg 211 Score = 56.0 bits (28), Expect = 8e-05 Identities = 115/145 (79%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | ||||| || | Sbjct: 966 atgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtcc 1025 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| || ||| ||| ||||||||||||||||||| ||| || |||| ||||||| Sbjct: 1026 gacactattgacaacgtgaaggcgaagatccaggacaa-ggagggcatccccccggacca 1084 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||| ||||| Sbjct: 1085 gcagc-gtctcatcttcgccggcaa 1108 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 292 aaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctcatcttcg 351 ||||| ||||||||||||| || | || |||| |||||||||||| | |||||||||| Sbjct: 360 aaggccaagatccaggacaagg-agggcatccccccggaccagcagc-gtctcatcttcg 417 Query: 352 ctggcaancattttgaggatgg 373 ||||||| || |||||||||| Sbjct: 418 ctggcaagcagcttgaggatgg 439 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | ||||| || | Sbjct: 1194 atgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtcc 1253 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||| || ||| ||| ||||||||||||||||||| Sbjct: 1254 gacactattgacaacgtgaaggcgaagatccaggaca 1290
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 230 bits (116), Expect = 3e-57 Identities = 284/346 (82%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 555 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 614 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 615 atccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 674 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 675 ctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacctt 734 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||| | || ||||||||||| || || |||||| | ||||||||||| Sbjct: 735 gtgctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatc 794 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | ||||| || | | |||||| ||| ||| ||| ||||| ||||||||||||| Sbjct: 795 accctcgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaa- 853 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || |||| |||||||||||| | ||||||||||| ||||| Sbjct: 854 ggagggcatccccccggaccagcagc-gtctcatcttcgccggcaa 898 Score = 224 bits (113), Expect = 2e-55 Identities = 293/358 (81%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 1000 agaccctgactgg-caagaccatcacacttgaggtcgagtcctcggacacgatcgacaat 1058 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1059 gtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttc 1118 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || || ||||| || ||||| ||||||||| |||| ||||||||| Sbjct: 1119 gctggcaagcagctggaggacggccgcacccttgccgactacaacgtccagaaggagtcc 1178 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | |||| | || ||||||||||| || || |||||| | Sbjct: 1179 accctccaccttgtgctcaggctcaggggtggtatgcagatcttcgtcaagaccctgacc 1238 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | |||||| ||| ||| ||| ||||| ||| Sbjct: 1239 ggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaacgtgaaggccaag 1298 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| |||| |||||||||||| ||||||||||||| ||||| Sbjct: 1299 atccaggacaa-ggagggtatccccccggaccagcagc-gcctcatcttcgccggcaa 1354 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| |||||||| |||||||| ||||| | |||||| ||| Sbjct: 99 ggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggccaag 158 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 159 atccaggacaaggagggcatccccccggaccagcagcgtctcatctttgctggcaagcag 218 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 219 cttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacct 277 Score = 216 bits (109), Expect = 4e-53 Identities = 160/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 327 ggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaag 386 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 387 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 446 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || || |||||||||||||| |||||||| ||||| ||||| Sbjct: 447 cttgaggatggccgcaccctggccgactacaacatccagaaggagtctaccctccacct 505 Score = 204 bits (103), Expect = 1e-49 Identities = 175/200 (87%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 1456 agaccctgactgg-caagaccattacccttgaggttgagtcgtccgacactattgacaac 1514 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 1515 gtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgtctgatcttt 1574 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| |||||||| || ||||| || ||||||||||| ||||||||| Sbjct: 1575 gctggtaagcagcttgaggatggccgcacccttgcggattacaacatccagaaggagtcc 1634 Query: 181 accctncacctggagctccg 200 || || ||||||| |||||| Sbjct: 1635 acactccacctggtgctccg 1654 Score = 194 bits (98), Expect = 1e-46 Identities = 167/191 (87%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 772 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctcggacacgatcgacaac 830 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 831 gtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttc 890 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || ||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 891 gccggcaagcagctggaggacggccgcacccttgccgactacaacatccagaaggaatcc 950 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 951 accctccacct 961 Score = 190 bits (96), Expect = 2e-45 Identities = 168/193 (87%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||| |||||||| ||||| ||||||||| Sbjct: 1228 agaccctgaccgg-caagaccatcacgcttgaggtcgagtcctcggacacgatcgacaac 1286 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||| || |||||||||||||||| |||||||| Sbjct: 1287 gtgaaggccaagatccaggacaaggagggtatccccccggaccagcagcgcctcatcttc 1346 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || | ||||||||||||||||| ||||||||| Sbjct: 1347 gccggcaagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtcc 1406 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1407 acccttcacctgg 1419 Score = 71.9 bits (36), Expect = 1e-09 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| || || |||||| | ||||||||||| ||| | ||||| || | | | Sbjct: 984 atgcagatcttcgtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcg 1043 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 1044 gacacgatcgacaatgtgaaggccaagatccaggacaa-ggagggcatccccccggacca 1102 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||||||||| Sbjct: 1103 gcagc-gtctcatcttcgctggcaa 1126 Score = 71.9 bits (36), Expect = 1e-09 Identities = 128/160 (80%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | ||||||||||| || | ||||| || | | | Sbjct: 72 atgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg 131 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 132 gacaccattgacaatgtcaaggccaagatccaggacaa-ggagggcatccccccggacca 190 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||| |||||||| || |||||||||| Sbjct: 191 gcagc-gtctcatctttgctggcaagcagcttgaggatgg 229 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 292 aaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctcatcttcg 351 ||||| ||||||||||||| || | || |||| |||||||||||| | |||||||||| Sbjct: 378 aaggccaagatccaggacaagg-agggcatccccccggaccagcagc-gtctcatcttcg 435 Query: 352 ctggcaancattttgaggatgg 373 ||||||| || |||||||||| Sbjct: 436 ctggcaagcagcttgaggatgg 457 Score = 42.1 bits (21), Expect = 1.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 284 acancgtnaaggcgaagatccaggaca 310 ||| ||| ||||||||||||||||||| Sbjct: 1510 acaacgtgaaggcgaagatccaggaca 1536 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 |||||||| || ||||| |||||| | ||||||||||| Sbjct: 1440 atgcagatattcgtgaagaccctgactggcaagaccat 1477
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 338 ggcaagactatcacccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaag 397 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 398 atccaggacaaagagggcatccccccagaccagcagcgtctcatcttcgccggcaagcag 457 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 458 ctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctccacctt 517 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | ||||||||||| Sbjct: 518 gtcctccgcctccgtggtggcatgcagatctttgtcaagacactgaccggcaagaccatc 577 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 578 accctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaagatccaggaca 635 Score = 224 bits (113), Expect = 2e-55 Identities = 161/179 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| ||| Sbjct: 566 ggcaagaccatcaccctcgaggtggaatcttctgacaccatcgacaacgtcaaggccaag 625 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 626 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggcaagcag 685 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||| | || |||||||||||||||||||| |||||||| || || ||||| Sbjct: 686 cttgaggacggcaggacccttgctgactacaacatccagaaggagtcaacgcttcacct 744 Score = 214 bits (108), Expect = 2e-52 Identities = 151/167 (90%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| Sbjct: 794 ggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaaggccaag 853 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 854 atccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggcaagcag 913 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtc 179 || || |||||| | || |||||||||||||||||||| |||||||| Sbjct: 914 ctggaggatggcaggacccttgctgactacaacatccagaaggagtc 960 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||||||||||||||||||| || | |||||| ||| Sbjct: 110 ggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaaggctaag 169 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 170 atccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggcaagcag 229 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 230 ctggaggatggcaggacccttgctgactacaacatccagaaggagtcgacccttcacctt 289 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || | |||||||||||||| || || ||| | |||||||| || Sbjct: 290 gtcctccgcctccgtggtggcatgcagatctttgtcaagactctgaccggcaagactatc 349 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 350 acccttgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatccaggaca 407 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| | ||||||||||||||||| Sbjct: 195 cggaccagcagc-gtctcatcttcgctggcaa 225
>gb|L41658.1|SCFPOLY Saccharum hybrid (clone SCUBI561) polyubiquitin mRNA, complete cds Length = 1187 Score = 230 bits (116), Expect = 3e-57 Identities = 247/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 554 ggcaagacgatcacccttgaggtggagtcctctgacaccatcgacaacgtcaaggccaag 613 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | |||||||||||||| |||||||| ||||||||||| Sbjct: 614 atccaggacaaggagggcatccctccggaccagcagcggctcatcttcgctggcaagcag 673 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || |||||||| ||||||||||| |||||| |||||| |||||| Sbjct: 674 ctggaggacgggcgcactcttgctgattacaacatccagaaggagagcaccctccacctg 733 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||||||||| ||| || | ||||||||||| Sbjct: 734 gtgctgcgcctcaggggaggaatgcagatctttgtgaagaccttgactggcaagaccata 793 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 ||| ||||||| || | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 794 acactggaggttgagagctccgacaccatcgacaacgtgaaggccaagatccaggaca 851 Score = 222 bits (112), Expect = 6e-55 Identities = 283/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 326 ggcaagacgatcacccttgaggtggagtcctctgacaccatcgacaacgtcaaggccaag 385 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | |||||||||||||| |||||||| || |||||||| Sbjct: 386 atccaggacaaggagggcatccctccggaccagcagcggctcatcttcgccggcaagcag 445 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || |||||||| ||||||||||| |||||| |||||| ||| || Sbjct: 446 ctggaggacgggcgcactcttgctgattacaacatccagaaggagagcaccctccacttg 505 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| ||||| | |||||||| || Sbjct: 506 gtgctgcgcctcaggggaggcatgcagatcttcgtgaagacccttactggcaagacgatc 565 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 566 acccttgaggtggagtcctctgacaccatcgacaacgtcaaggccaagatccaggacaa- 624 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| |||||||||||| | ||||||||||||||||| Sbjct: 625 ggagggcatccctccggaccagcagc-ggctcatcttcgctggcaa 669 Score = 210 bits (106), Expect = 2e-51 Identities = 281/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||||| |||||| ||| Sbjct: 98 ggcaagactatcaccctcgaggtggagtcttctgacaccattgacaacgtcaaggctaag 157 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||| Sbjct: 158 atccaggacaaggagggcattcccccggaccagcagcggctcatcttcgccggcaagcag 217 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || |||||||| ||||||||||| |||||| |||||| ||| || Sbjct: 218 ctggaggacgggcgcactcttgctgattacaacatccagaaggagagcaccctccacttg 277 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || ||||||||||||||||| ||||| | |||||||| || Sbjct: 278 gtkctgcgcctcaggggaggcatgcagatctttgtgaagacccttactggcaagacgatc 337 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 338 acccttgaggtggagtcctctgacaccatcgacaacgtcaaggccaagatccaggacaa- 396 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| |||||||||||| | ||||||||||| ||||| Sbjct: 397 ggagggcatccctccggaccagcagc-ggctcatcttcgccggcaa 441 Score = 159 bits (80), Expect = 8e-36 Identities = 163/193 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| || || ||||| ||| ||| |||||||||||||||| ||||| ||| Sbjct: 782 ggcaagaccataacactggaggttgagagctccgacaccatcgacaacgtgaaggccaag 841 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||||||||| |||||||| ||||| || |||||||| Sbjct: 842 atccaggacaaggaggggatccccccggaccaacagcgtctgatcttcgccggcaagcag 901 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| |||||| |||||| |||||| Sbjct: 902 ctggaggatggccgcacccttgcagactacaacatccagaaggagagcaccctccacctg 961 Query: 193 gagctccgncttc 205 | |||||| |||| Sbjct: 962 gtgctccgtcttc 974 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | |||||||| || || | |||||||| | Sbjct: 71 atgcagatctttgtgaagaccctcaccggcaagactatcaccctcgaggtggagtcttct 130 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 |||||||| ||| ||| ||||| ||||||||||||| Sbjct: 131 gacaccattgacaacgtcaaggctaagatccaggaca 167
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 226 bits (114), Expect = 4e-56 Identities = 168/188 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct: 30 ggcaagaccatcaccctggaggtggagtcatctgacaccattgacaacgtgaaggcgaag 89 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 90 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggtaagcag 149 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || | || |||||||||||||| |||||||||||||| ||| || Sbjct: 150 cttgaggatggccgcaccttggcggactacaacatccagaaggagtccacccttcacttg 209 Query: 193 gagctccg 200 | |||||| Sbjct: 210 gtgctccg 217 Score = 63.9 bits (32), Expect = 3e-07 Identities = 79/97 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||| |||||||| ||||| | ||||||||||| || |||||||||| | Sbjct: 3 atgcagatatttgtgaagaccctcaccggcaagaccatcaccctggaggtggagtcatct 62 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 |||||||| ||| ||| ||||||||||||||||||| Sbjct: 63 gacaccattgacaacgtgaaggcgaagatccaggaca 99
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 226 bits (114), Expect = 4e-56 Identities = 168/188 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct: 30 ggcaagaccatcaccctggaggtggagtcatctgacaccattgacaacgtgaaggcgaag 89 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 90 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggtaagcag 149 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || | || |||||||||||||| |||||||||||||| ||| || Sbjct: 150 cttgaggatggccgcaccttggcggactacaacatccagaaggagtccacccttcacttg 209 Query: 193 gagctccg 200 | |||||| Sbjct: 210 gtgctccg 217 Score = 63.9 bits (32), Expect = 3e-07 Identities = 79/97 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||| |||||||| ||||| | ||||||||||| || |||||||||| | Sbjct: 3 atgcagatatttgtgaagaccctcaccggcaagaccatcaccctggaggtggagtcatct 62 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 |||||||| ||| ||| ||||||||||||||||||| Sbjct: 63 gacaccattgacaacgtgaaggcgaagatccaggaca 99
>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds Length = 400 Score = 226 bits (114), Expect = 4e-56 Identities = 168/188 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| Sbjct: 11 ggcaagaccatcaccctggaggtggagtcatctgacaccattgacaacgtgaaggcgaag 70 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 71 atccaggacaaggagggcattcccccggaccagcagcgtctcatctttgccggtaagcag 130 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || | || |||||||||||||| |||||||||||||| ||| || Sbjct: 131 cttgaggatggccgcaccttggcggactacaacatccagaaggagtccacccttcacttg 190 Query: 193 gagctccg 200 | |||||| Sbjct: 191 gtgctccg 198 Score = 46.1 bits (23), Expect = 0.081 Identities = 57/70 (81%) Strand = Plus / Plus Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | |||||||| ||| ||| ||||||||| Sbjct: 11 ggcaagaccatcaccctggaggtggagtcatctgacaccattgacaacgtgaaggcgaag 70 Query: 301 atccaggaca 310 |||||||||| Sbjct: 71 atccaggaca 80
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 226 bits (114), Expect = 4e-56 Identities = 168/188 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| Sbjct: 2514 ggcaagaccatcaccctggaggtggagtcctctgacaccatcgacaatgtgaaggcgaag 2573 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||| Sbjct: 2574 atccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgccggcaagcag 2633 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| ||||||||||| || |||||| Sbjct: 2634 ctggaggatggccgcaccctggcagactacaacatccagaaggagtccactctccacctg 2693 Query: 193 gagctccg 200 | |||||| Sbjct: 2694 gtgctccg 2701 Score = 212 bits (107), Expect = 6e-52 Identities = 281/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||||| || |||||||| ||||| | |||| |||| Sbjct: 2286 ggcaagaccatcaccttggaggtggagtcttcggacaccatngacaatgtgaaggngaag 2345 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || |||| |||||||||||||| || |||||||||||||| Sbjct: 2346 atccaggacaaggaaggaatccccccagaccagcagcgtcttatttttgctggcaagcag 2405 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || || || |||||||||||||| |||||||||||||| |||||| Sbjct: 2406 cttgaggatggccgcaccctagcagactacaacatccagaaggagtccacccttcacctg 2465 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| | | ||||||||||| || || ||||| | ||||||||||| Sbjct: 2466 gtgctccgcttncgcggtggtatgcagatcttcgtcaagaccctcaccggcaagaccatc 2525 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||||| | | ||||||||| ||| || ||||||||||||||||||| Sbjct: 2526 accctggaggtggagtcctctgacaccatcgacaatgtgaaggcgaagatccaggacaa- 2584 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || |||| |||||||||||| | ||||||||||| ||||| Sbjct: 2585 ggagggcatccccccggaccagcagc-gtctcatcttcgccggcaa 2629 Score = 176 bits (89), Expect = 3e-41 Identities = 146/167 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||| |||||||| ||||| |||||||| |||||||||| ||||| ||| Sbjct: 2058 ggcaagactatcacgcttgaggtcgagtcttctgacacgatcgacaacgtgaaggccaag 2117 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||||| Sbjct: 2118 atccaggacaaggagggaatccccccggaccagcagcgtctcatcttcgctggcaagcag 2177 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtc 179 || || |||||||| || || ||||||||||||||||| | |||||| Sbjct: 2178 ctcgaggatggccgcaccctcgctgactacaacatccaganggagtc 2224 Score = 163 bits (82), Expect = 5e-37 Identities = 156/186 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||||| || |||| || ||| | | | |||| ||| Sbjct: 1830 ggcaagaccatcacccttgaggttgagtcttcagacamtattgacmatgtcmaggctaag 1889 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||| |||||| | ||||| |||||| | || ||||||||||||||||| Sbjct: 1890 atacaggacaaggaaggcattcctccggatcagcagaggctgatctttgctggcaagcag 1949 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| || | ||||||||||||||| |||||||||||| | |||||| Sbjct: 1950 ctcgaggatggccgtaccctagytgactacaacatccagaaggagtccaccstccacctg 2009 Query: 193 gagctc 198 | |||| Sbjct: 2010 gtgctc 2015 Score = 54.0 bits (27), Expect = 3e-04 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||| ||||| || ||| | | ||||||||||| || ||||||||||| | | Sbjct: 2259 atgcagatttttgtcaagaccttnactggcaagaccatcaccttggaggtggagtcttcg 2318 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 |||||||| ||| || |||| |||||||||||||| Sbjct: 2319 gacaccatngacaatgtgaaggngaagatccaggaca 2355 Score = 54.0 bits (27), Expect = 3e-04 Identities = 71/85 (83%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 2091 gacacgatcgacaacgtgaaggccaagatccaggacaa-ggagggaatccccccggacca 2149 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||||||||| Sbjct: 2150 gcagc-gtctcatcttcgctggcaa 2173
>gb|M60176.1|BLYMUB2 Barley ubiquitin (mub2) gene, complete cds Length = 1730 Score = 222 bits (112), Expect = 6e-55 Identities = 181/205 (88%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 766 agaccctgac-gggcaagaccatcacgctggaggtggagtcctcggacaccatcgacaac 824 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | ||||||||||| || |||||||| Sbjct: 825 gtcaaggccaagatccaggacaaggagggcatcccgccggaccagcaacgcctcatcttc 884 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || ||||||||||| || || |||||||||||||| ||||||||| Sbjct: 885 gccggcaagcagctcgaggatggccgtactctcgccgactacaacatccagaaggagtcc 944 Query: 181 accctncacctggagctccgncttc 205 ||||| ||||||| |||||| |||| Sbjct: 945 accctccacctggtgctccgccttc 969 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| ||||||||||||| || |||||||||| | | | Sbjct: 750 atgcagatcttcgtgaagaccctgacgggcaagaccatcacgctggaggtggagtcctcg 809 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 810 gacaccatcgacaacgtcaaggccaagatccaggacaa-ggagggcatcccgccggacca 868 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||| | ||||||||||||| ||||| Sbjct: 869 gcaac-gcctcatcttcgccggcaa 892
>gb|BT016436.1| Zea mays clone Contig269 mRNA sequence Length = 990 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||||| |||||||| ||||| || | ||| || ||| Sbjct: 293 ggcaagaccatcaccttggaggtggagtcgtctgacacaatcgataatgtcaaagccaag 352 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct: 353 atccaggacaaggagggcattccaccggaccagcagcgcctgatctttgctggcaagcag 412 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| || || |||||||||||||| |||||| |||||| |||||| Sbjct: 413 ctggaggatggccgtaccctcgccgactacaacatccagaaggagagcaccctccacctg 472 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| | | ||||||||||||||||| ||| || | ||||||||||| Sbjct: 473 gtgctccgcttgcgaggtggtatgcagatctttgtgaagaccttgactggcaagaccata 532 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 533 accctggaggttgagagctccgacaccatcgacaacgtgaaggcgaagatccaggaca 590 Score = 182 bits (92), Expect = 5e-43 Identities = 209/254 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||| ||||||| ||| || ||| Sbjct: 65 ggcaagacgatcacccttgaggtggagtcctcagacaccattgacaacgtcaatgccaag 124 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | |||||||||||||| |||||||| || |||||||| Sbjct: 125 atccaggacaaggagggcatcccaccggaccagcagcggctcatcttcgccggcaagcag 184 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || | ||||||||||||||||| |||||| |||||| ||| || Sbjct: 185 ctggaggatggtcgcaccttggctgactacaacatccagaaggagagcaccctccacttg 244 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||||||||| || || | ||||||||||| Sbjct: 245 gtgctccgcctcaggggtggcatgcagatctttgtgaagacattgactggcaagaccatc 304 Query: 253 acattggaggtgga 266 || ||||||||||| Sbjct: 305 accttggaggtgga 318 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| ||| |||||||||||||||| ||||||||| Sbjct: 521 ggcaagaccataaccctggaggttgagagctccgacaccatcgacaacgtgaaggcgaag 580 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||| ||||| || |||||||| Sbjct: 581 atccaggacaaagagggcatccccccagaccagcagcgtctgatcttcgccggcaagcag 640 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| ||| || |||||| Sbjct: 641 ctggaggatggccgcaccctagcagactacaacatccagaaggagagcactctccacctg 700 Query: 193 gagctccg 200 | |||||| Sbjct: 701 gtgctccg 708
>gb|S94466.1| polyubiquitin [maize, Genomic, 3439 nt] Length = 3439 Score = 214 bits (108), Expect = 2e-52 Identities = 245/298 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||||| |||||||| ||||| || | ||| || ||| Sbjct: 2817 ggcaagaccatcaccttggaggtggagtcgtctgacacaatcgataatgtcaaagccaag 2876 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct: 2877 atccaggacaaggagggcattccaccggaccagcagcgcctgatctttgctggcaagcag 2936 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| || || |||||||||||||| |||||| |||||| |||||| Sbjct: 2937 ctggaggatggccgtaccctcgccgactacaacatccagaaggagagcaccctccacctg 2996 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| | | ||||||||||||||||| ||| || | ||||||||||| Sbjct: 2997 gtgctccgcttgcgaggtggtatgcagatctttgtgaagaccttgactggcaagaccata 3056 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 3057 accctggaggttgagagctccgacaccatcgacaacgtgaaggcgaagatccaggaca 3114 Score = 212 bits (107), Expect = 6e-52 Identities = 158/177 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| ||| Sbjct: 2361 ggcaagacgatcacccttgaggtggagtcctcggacaccatcgacaatgtcaaggccaag 2420 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 2421 atccaggacaaggagggcattccaccggaccagcagcggctcatctttgctggcaagcag 2480 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || || ||||||||||| ||||| || ||||||||||| |||||| |||||| ||| Sbjct: 2481 ctggaggatggccgtacccttgcagattacaacatccagaaggagagcaccctccac 2537 Score = 194 bits (98), Expect = 1e-46 Identities = 155/176 (88%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| Sbjct: 1680 aagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatc 1739 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| |||||||||||||||| |||||||| ||||||||||| || Sbjct: 1740 caggacaaggaaggcattcccccggaccagcagcggctcatcttcgctggcaagcagctc 1799 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || || |||||||| |||||||||||||| |||||| |||||| ||||| Sbjct: 1800 gaggacgggcgcacacttgccgactacaacatccagaaggagagcaccctccacct 1855 Score = 190 bits (96), Expect = 2e-45 Identities = 210/254 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||| ||| Sbjct: 2589 ggcaagacgatcacccttgaggtggagtcctcagacaccattgacaacgtcaaggccaag 2648 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||||| || ||||| || |||||||| Sbjct: 2649 atccaggacaaggagggcattccaccggaccagcagcggctgatcttcgccggcaagcag 2708 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || | ||||||||||||||||| |||||| |||||| ||| || Sbjct: 2709 ctggaggatggtcgcaccttggctgactacaacatccagaaggagagcaccctccacttg 2768 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||||||||| || || | ||||||||||| Sbjct: 2769 gtgctccgcctcaggggtggcatgcagatctttgtgaagacattgactggcaagaccatc 2828 Query: 253 acattggaggtgga 266 || ||||||||||| Sbjct: 2829 accttggaggtgga 2842 Score = 159 bits (80), Expect = 8e-36 Identities = 149/174 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1908 aagactatcaccctcgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatc 1967 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| | |||||||||||||| ||||| |||||||||||||| || Sbjct: 1968 caggacaaggagggcatccctccggaccagcagcggctcatttttgctggcaagcagctc 2027 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || || || || || || || ||||||||||| || |||||| |||||| ||| Sbjct: 2028 gaggacgggcgcacgctggccgactacaacattcagaaggagagcaccctccac 2081 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| ||| |||||||||||||||| ||||||||| Sbjct: 3045 ggcaagaccataaccctggaggttgagagctccgacaccatcgacaacgtgaaggcgaag 3104 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||| ||||| || |||||||| Sbjct: 3105 atccaggacaaagagggcatccccccagaccagcagcgtctgatcttcgccggcaagcag 3164 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| ||| || |||||| Sbjct: 3165 ctggaggatggccgcaccctagcagactacaacatccagaaggagagcactctccacctg 3224 Query: 193 gagctccg 200 | |||||| Sbjct: 3225 gtgctccg 3232 Score = 143 bits (72), Expect = 5e-31 Identities = 236/298 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||| ||||| ||||| ||||| ||||| | |||||| ||| Sbjct: 2133 ggcaagactatcacccttgaggtcgagtcttctgataccattgacaatgtcaaggccaag 2192 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | |||||||||||||| ||||| ||||| |||||||| Sbjct: 2193 atccaggacaaggagggcatccctccggaccagcagcggctcatttttgccggcaagcag 2252 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || ||||| ||||||||||| || |||||| |||||| ||| || Sbjct: 2253 ctcgaggacgggcgcacgcttgccgactacaacattcagaaggagagcaccctccacttg 2312 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| || || | |||||||| || Sbjct: 2313 gtgctgcgtctcaggggtggcatgcagatcttcgtgaagacacttactggcaagacgatc 2372 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | | |||||||||| ||| || ||||| ||||||||||||| Sbjct: 2373 acccttgaggtggagtcctcggacaccatcgacaatgtcaaggccaagatccaggaca 2430 Score = 54.0 bits (27), Expect = 3e-04 Identities = 55/65 (84%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || ||||| ||||||| Sbjct: 1938 gacaccatcgacaacgtcaaggccaagatccaggacaa-ggagggcatccctccggacca 1996 Query: 334 gcagc 338 ||||| Sbjct: 1997 gcagc 2001 Score = 46.1 bits (23), Expect = 0.081 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| || | | |||| ||||||| Sbjct: 1710 gacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattccc-ccggacca 1768 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| || |||||||||||||||| Sbjct: 1769 gcagcggc-tcatcttcgctggcaa 1792
>gb|BT016403.1| Zea mays clone Contig236 mRNA sequence Length = 1019 Score = 212 bits (107), Expect = 6e-52 Identities = 158/177 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| ||| Sbjct: 417 ggcaagacgatcacccttgaggtggagtcctcggacaccatcgacaatgtcaaggccaag 476 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 477 atccaggacaaggagggcattccaccggaccagcagcggctcatctttgctggcaagcag 536 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || || ||||||||||| ||||| || ||||||||||| |||||| |||||| ||| Sbjct: 537 ctggaggatggccgtacccttgcagattacaacatccagaaggagagcaccctccac 593 Score = 178 bits (90), Expect = 8e-42 Identities = 162/188 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||| ||| Sbjct: 645 ggcaagacgatcacccttgaggtggagtcctcagacaccattgacaacgtcaaggccaag 704 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||||| || ||||| || |||||||| Sbjct: 705 atccaggacaaggagggcattccaccggaccagcagcggctgatcttcgccggcaagcag 764 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || | ||||||||||||||||| |||||| |||||| ||| || Sbjct: 765 ctggaggatggtcgcaccttggctgactacaacatccagaaggagagcaccctccacttg 824 Query: 193 gagctccg 200 | |||||| Sbjct: 825 gtgctccg 832 Score = 172 bits (87), Expect = 5e-40 Identities = 197/241 (81%) Strand = Plus / Plus Query: 70 aagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaag 129 |||||||| ||||||||||||||| | |||||||||||||| || ||||||||||||||| Sbjct: 18 aagatccaggacaaggagggcattccaccggaccagcagcgcctgatctttgctggcaag 77 Query: 130 cancttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || || || ||||||||||| || || |||||||||||||| |||||| |||||| ||| Sbjct: 78 cagctggaggatggccgtaccctcgccgactacaacatccagaaggagagcaccctccac 137 Query: 190 ctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagacc 249 |||| |||||| | | ||||||||||||||||| ||| || | ||||||||| Sbjct: 138 ctggtgctccgcttgcgaggtggtatgcagatctttgtgaagaccttgactggcaagacc 197 Query: 250 atnacattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggac 309 || || ||||||| || | ||||||||| ||| ||| |||||||||||||||||| Sbjct: 198 ataaccctggaggttgagagctccgacaccatcgacaacgtgaaggcgaagatccaggac 257 Query: 310 a 310 | Sbjct: 258 a 258 Score = 151 bits (76), Expect = 2e-33 Identities = 237/298 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| ||| |||||||||||||||| ||||||||| Sbjct: 189 ggcaagaccataaccctggaggttgagagctccgacaccatcgacaacgtgaaggcgaag 248 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| |||||||||||||| ||||| || |||||||| Sbjct: 249 atccaggacaaagagggcatccccccagaccagcagcgtctgatcttcgccggcaagcag 308 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| |||||| ||| || Sbjct: 309 ctggaggatggccgcaccctagcagactacaacatccagaaggagagcaccctccacttg 368 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| || || | |||||||| || Sbjct: 369 gtgctgcgtctcaggggtggcatgcagatcttcgtgaagacacttactggcaagacgatc 428 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | | |||||||||| ||| || ||||| ||||||||||||| Sbjct: 429 acccttgaggtggagtcctcggacaccatcgacaatgtcaaggccaagatccaggaca 486
>gb|U29158.1|ZMU29158 Zea mays polyubiquitin (MubC5) mRNA, complete cds Length = 1381 Score = 212 bits (107), Expect = 6e-52 Identities = 161/181 (88%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| ||| Sbjct: 738 ggcaagacgatcacccttgaggtggagtcctcggacaccatcgacaatgtcaaggccaag 797 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct: 798 atccaggacaaggagggcattccaccggaccagcagcgcctgatctttgctggcaagcag 857 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| || || |||||||||||||| |||||| |||||| |||||| Sbjct: 858 ctggaggatggccgtaccctcgccgactacaacatccagaaggagagcaccctccacctg 917 Query: 193 g 193 | Sbjct: 918 g 918 Score = 194 bits (98), Expect = 1e-46 Identities = 155/176 (88%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| Sbjct: 57 aagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatc 116 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| |||||||||||||||| |||||||| ||||||||||| || Sbjct: 117 caggacaaggaaggcattcccccggaccagcagcggctcatcttcgctggcaagcagctc 176 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || || |||||||| |||||||||||||| |||||| |||||| ||||| Sbjct: 177 gaggacgggcgcacacttgccgactacaacatccagaaggagagcaccctccacct 232 Score = 159 bits (80), Expect = 8e-36 Identities = 149/174 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 285 aagactatcaccctcgaggtggagtcttctgacaccatcgacaacgtcaaggccaagatc 344 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| | |||||||||||||| || ||||||||||||||||| || Sbjct: 345 caggacaaggaggggattcctccggaccagcagcgcctgatctttgctggcaagcagctc 404 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || || || || || || || ||||||||||| || |||||| |||||| ||| Sbjct: 405 gaggacgggcgcacgctggccgactacaacattcagaaggagagcaccctccac 458 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| ||| |||||||||||||||| ||||||||| Sbjct: 966 ggcaagaccataaccctggaggttgagagctccgacaccatcgacaacgtgaaggcgaag 1025 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| | || |||||||||||||| |||||||| |||||||| Sbjct: 1026 atccaggacaaagagggcatccctccagaccagcagcgtctgatctttgccggcaagcag 1085 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| ||| || |||||| Sbjct: 1086 ctggaggatggccgcaccctagcagactacaacatccagaaggagagcactctccacctg 1145 Query: 193 gagctccg 200 | |||||| Sbjct: 1146 gtgctccg 1153 Score = 143 bits (72), Expect = 5e-31 Identities = 236/298 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||| ||||| ||||| ||||| ||||| | |||||| ||| Sbjct: 510 ggcaagactatcacccttgaggtcgagtcttctgataccattgacaatgtcaaggccaag 569 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | |||||||||||||| ||||| ||||| |||||||| Sbjct: 570 atccaggacaaggagggcatccctccggaccagcagcggctcatttttgccggcaagcag 629 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || ||||| ||||||||||| || |||||| |||||| ||| || Sbjct: 630 ctcgaggacgggcgcacgcttgccgactacaacattcagaaggagagcaccctccacttg 689 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| || || | |||||||| || Sbjct: 690 gtgctgcgtctcaggggtggcatgcagatcttcgtgaagacacttactggcaagacgatc 749 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | | |||||||||| ||| || ||||| ||||||||||||| Sbjct: 750 acccttgaggtggagtcctcggacaccatcgacaatgtcaaggccaagatccaggaca 807 Score = 71.9 bits (36), Expect = 1e-09 Identities = 80/97 (82%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||| || | ||||||||||| || ||||||| || | Sbjct: 939 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctcc 998 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 999 gacaccatcgacaacgtgaaggcgaagatccaggaca 1035 Score = 54.0 bits (27), Expect = 3e-04 Identities = 71/85 (83%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || | ||| ||||||| Sbjct: 315 gacaccatcgacaacgtcaaggccaagatccaggacaa-ggaggggattcctccggacca 373 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| |||| ||||| |||||||| Sbjct: 374 gcagc-gcctgatctttgctggcaa 397 Score = 46.1 bits (23), Expect = 0.081 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| || | | |||| ||||||| Sbjct: 87 gacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattccc-ccggacca 145 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| || |||||||||||||||| Sbjct: 146 gcagcggc-tcatcttcgctggcaa 169
>emb|Z24723.1|PCUBIQGNA P.chrysosporium ubiquitin gene, complete CDS Length = 2054 Score = 210 bits (106), Expect = 2e-51 Identities = 160/180 (88%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 |||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| || Sbjct: 399 gggcaagaccatcaccctcgaggtcgagtcctctgacaccatcgacaacgtcaaggccaa 458 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| |||||||||||||| | || ||||||||||||||||||||||| |||||||| Sbjct: 459 gatccaggacaaggagggcatcccaccagaccagcagcgtctcatctttgccggcaagca 518 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || | || ||||||||||| |||||||||||||| ||||| Sbjct: 519 gcttgaggatggccgcaccctctccgattacaacatccagaaggagtccaccctccacct 578 Score = 145 bits (73), Expect = 1e-31 Identities = 151/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||| || ||||| ||||| || |||||||| ||||||| |||||||||| Sbjct: 1186 ggcaagacgatcacgctcgaggtcgagtcttcggacaccattgacaacgtcaaggcgaag 1245 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| |||| ||||||||||| |||||||| ||||| ||||| Sbjct: 1246 atccaagacaaggagggtattcccccagaccagcagcgcctcatcttcgctggtaagcag 1305 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || || || || ||| | ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1306 ctggaggacggtcgcactctttcggactataacatccagaaggagtctacccttcacct 1364 Score = 143 bits (72), Expect = 5e-31 Identities = 152/179 (84%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||||||||||||||| || ||||| ||||| || |||||||| || || Sbjct: 669 agaccctgac-gggcaagaccatcacgctcgaggtcgagtcttccgacaccattgataat 727 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct: 728 gtgaaggccaagatccaggacaaggaaggcattcctccggaccagcagcgtctcatcttt 787 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtc 179 ||||||||||| || || || |||||||| | | || ||||||||||| |||||||| Sbjct: 788 gctggcaagcagctcgaggacggccgtacgttgtccgattacaacatccagaaggagtc 846 Score = 115 bits (58), Expect = 1e-22 Identities = 137/165 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| || ||||| ||||| ||||| || ||||| |||||||||| |||||| ||| Sbjct: 1466 ggcaagacgattaccctcgaggttgagtcttccgacacgatcgacaacgtcaaggcaaag 1525 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| ||||| | || |||||||||||||| ||||| || |||||||| Sbjct: 1526 atccaagacaaggaaggcatcccgcccgaccagcagcgtctgatcttcgccggcaagcaa 1585 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggag 177 || || || || ||||| || | |||||||||||||| |||||| Sbjct: 1586 ctcgaggacgggcgtaccctctccgactacaacatccagaaggag 1630 Score = 115 bits (58), Expect = 1e-22 Identities = 265/340 (77%), Gaps = 2/340 (0%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| ||||| |||||||| ||||| || ||||| |||||||||| |||||| ||||| Sbjct: 961 aagacgatcactcttgaggtcgagtcgtcggacacgatcgacaacgtcaaggccaagatt 1020 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| | ||||| |||||||| || ||||| || |||||||| || Sbjct: 1021 caggacaaggagggcatccctccggatcagcagcgcctgatcttcgccggcaagcagctc 1080 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || |||||||| || ||| | || ||||| ||||| || ||||| ||||| ||||| | Sbjct: 1081 gaagatggccgcacgctttcggattacaatatccagaaagagtctaccctccaccttgtc 1140 Query: 196 ctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnaca 255 || || |||| ||||||||||| ||||| || || | |||||||| || || Sbjct: 1141 cttcgtcttcgtggtggtatgcagatcttcgtgaagacgttgaccggcaagacgatcacg 1200 Query: 256 ttggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacanggga 315 | ||||| || | ||||||||| ||| ||| |||||||||||||| |||| ||| Sbjct: 1201 ctcgaggtcgagtcttcggacaccattgacaacgtcaaggcgaagatccaagacaa-gga 1259 Query: 316 nggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| | || | |||||||||| |||||||||||||||| Sbjct: 1260 gggtattcccccagaccagcagc-gcctcatcttcgctgg 1298 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 |||||||||||||| || |||||| ||||||||||||| Sbjct: 653 atgcagatctttgtcaagaccctgacgggcaagaccat 690 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| || || ||||||||||||| || | ||||| || | | Sbjct: 373 atgcagatcttcgtgaagactctcacgggcaagaccatcaccctcgaggtcgagtcctct 432 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 433 gacaccatcgacaacgtcaaggccaagatccaggaca 469
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 210 bits (106), Expect = 2e-51 Identities = 166/188 (88%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| ||||||||||| ||||| | ||||| ||| Sbjct: 288 ggcaagaccatcaccctggaggttgagtcgtctgacaccattgacaatgtgaaggccaag 347 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||| Sbjct: 348 atccaggacaaggagggcattcccccggaccagcagcgcctgatctttgctggtaagcag 407 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || ||||| |||||||||||||| |||||||||||||| ||| || Sbjct: 408 cttgaggatggccgcacccttgcggactacaacatccagaaggagtccaccctccacttg 467 Query: 193 gagctccg 200 | |||||| Sbjct: 468 gtgctccg 475 Score = 202 bits (102), Expect = 6e-49 Identities = 165/188 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| ||||| ||||||||||| ||||| | ||||| ||| Sbjct: 744 ggcaagaccatcaccttagaggttgagtcgtctgacaccattgacaatgtgaaggccaag 803 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||| Sbjct: 804 atccaggacaaggagggcatccccccggaccagcagcgcctcatctttgccggcaagcag 863 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 864 ctcgaggatggccgcacccttgccgactacaacatccagaaggagtccacccttcacctg 923 Query: 193 gagctccg 200 | |||||| Sbjct: 924 gtgctccg 931 Score = 194 bits (98), Expect = 1e-46 Identities = 164/188 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| |||||||| ||||| ||||||||||| ||||| | |||||| ||| Sbjct: 60 ggcaagaccatcacacttgaggtcgagtcttctgacaccattgacaatgtcaaggcaaag 119 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| ||||| | ||||| |||||||| ||||| |||||||||||||| Sbjct: 120 atccaggacaaggaaggcatccctccggatcagcagcgcctcatatttgctggcaagcaa 179 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || ||||| || |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 180 ctagaggacggccgcacccttgctgactacaacatccagaaggagtccaccctccacctg 239 Query: 193 gagctccg 200 | |||||| Sbjct: 240 gtgctccg 247 Score = 184 bits (93), Expect = 1e-43 Identities = 276/343 (80%), Gaps = 2/343 (0%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||||| || ||||| |||||||| | |||||||||||| Sbjct: 519 aagaccatcaccctggaggttgagtcttcagacacaatcgacaatgtgaaggcgaagatc 578 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| ||||| | || |||||||||||||||||||||||||| ||||| ||| Sbjct: 579 caggacaaggaaggcatccctccagaccagcagcgtctcatctttgctggaaagcaactt 638 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || ||||| || || || |||||||||||||| |||||||||||||| ||||||| | Sbjct: 639 gaggacggccgcactctcgccgactacaacatccagaaggagtccaccctccacctggtg 698 Query: 196 ctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnaca 255 ||||| || | ||||||||||| || || ||||| | ||||||||||| || Sbjct: 699 ctccgcctccgtggtggcatgcagatcttcgtcaagaccctcactggcaagaccatcacc 758 Query: 256 ttggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacanggga 315 || ||||| || | |||||||| ||| || ||||| ||||||||||||| ||| Sbjct: 759 ttagaggttgagtcgtctgacaccattgacaatgtgaaggccaagatccaggacaa-gga 817 Query: 316 nggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 || |||| |||||||||||| |||||||||| || ||||| Sbjct: 818 gggcatccccccggaccagcagc-gcctcatctttgccggcaa 859 Score = 56.0 bits (28), Expect = 8e-05 Identities = 115/145 (79%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| ||||| | ||||||||||| ||| | ||||| || | Sbjct: 33 atgcagatctttgtgaagaccctcactggcaagaccatcacacttgaggtcgagtcttct 92 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || ||||| |||| || Sbjct: 93 gacaccattgacaatgtcaaggcaaagatccaggacaa-ggaaggcatccctccggatca 151 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||| || |||||||| Sbjct: 152 gcagc-gcctcatatttgctggcaa 175
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 208 bits (105), Expect = 9e-51 Identities = 279/343 (81%), Gaps = 2/343 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||||| ||||| ||| Sbjct: 2021 ggcaagactatcaccctcgaggtggagtcgtctgacaccattgacaacgttaaggccaag 2080 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||| || Sbjct: 2081 atccaggacaaggagggcatccccccagaccagcagcggctcatctttgctggcaaacag 2140 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || |||||||||||||||||||| |||||| |||||| ||||| Sbjct: 2141 cttgaggacgggcgcacgcttgctgactacaacatccagaaggagagcaccctccacctt 2200 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||||||||| |||||| | |||||||| || Sbjct: 2201 gtgctccgtctcaggggaggcatgcagatctttgtgaaaaccctgaccggcaagactatc 2260 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | | |||||||| ||| ||| ||||| ||||||||||||| Sbjct: 2261 accctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatccaggacaa- 2319 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| || ||||| | |||||||||| | |||||||| ||||| Sbjct: 2320 ggagggcatccctccagaccagcagc-ggctcatctttgctgg 2361 Score = 192 bits (97), Expect = 6e-46 Identities = 252/310 (81%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 2466 agaccctgaccgg-caagactatcaccctcgaggtggagtcttcagacaccatcgacaac 2524 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||||||| |||| ||||||||||| ||||||||| Sbjct: 2525 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcggctcatcttt 2584 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| || || || || ||||| |||||||||||||| |||||| | Sbjct: 2585 gctggaaagcagcttgaggacgggcgcacgcttgccgactacaacatccagaaggagagc 2644 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||| ||| ||| || || ||||||||||| ||||| |||||| | Sbjct: 2645 accctccacttggtgctgcgcctcaggggaggcatgcagatcttcgtgaagaccctgacc 2704 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 |||||||| || || | |||||||| | ||||||||| ||| || ||||| ||| Sbjct: 2705 ggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaatgtcaaggccaag 2764 Query: 301 atccaggaca 310 |||||||||| Sbjct: 2765 atccaggaca 2774 Score = 190 bits (96), Expect = 2e-45 Identities = 242/298 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 2249 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaag 2308 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||||||||| ||||| Sbjct: 2309 atccaggacaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 2368 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || ||||| |||||||||||||| |||||| |||||| ||| || Sbjct: 2369 cttgaggacgggcgcacgcttgccgactacaacatccagaaggagagcaccctccacttg 2428 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| |||||| | |||||||| || Sbjct: 2429 gtgctgcgcctcaggggaggcatgcagatcttcgtgaagaccctgaccggcaagactatc 2488 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 2489 accctcgaggtggagtcttcagacaccatcgacaacgtcaaggccaagatccaggaca 2546 Score = 180 bits (91), Expect = 2e-42 Identities = 172/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 2694 agaccctgaccgg-caagactatcaccctcgaggtggagtcttcagacaccatcgacaat 2752 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | ||||||||||||||| | ||||| Sbjct: 2753 gtcaaggccaagatccaggacaaggagggcatcccaccggaccagcagcgtttgatcttc 2812 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || |||||||| || ||||| || ||||||||||| |||||| | Sbjct: 2813 gctggcaagcagctggaggatggccgcacccttgcggattacaacatccagaaggagagc 2872 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 2873 accctccacctggtgctccg 2892 Score = 174 bits (88), Expect = 1e-40 Identities = 240/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| |||||||||||| ||||| | ||||| ||| Sbjct: 3161 ggcaagaccatcaccttggaggtggagagctctgacaccattgacaatgtgaaggccaag 3220 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| |||||||||||||| |||||||| |||||||| Sbjct: 3221 atccaggacaaggagggcattcccccagaccagcagcgtctgatctttgcgggcaagcag 3280 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| |||||| ||||| Sbjct: 3281 ctggaggatggccgcactctcgcggactacaacatccagaaggagagcacccttcacctt 3340 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || |||||||||||||| || |||||| | || || ||||| Sbjct: 3341 gttctccgcctcagaggtggtatgcagatctttgtaaagaccctgactggaaaaaccata 3400 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| || ||||||||||||||||||| Sbjct: 3401 accctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccaggaca 3458 Score = 151 bits (76), Expect = 2e-33 Identities = 237/298 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || || ||||| ||||| | |||||| ||| Sbjct: 2933 ggcaagacaatcacccttgaggtggagtcttcggataccattgacaatgtcaaggccaag 2992 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 2993 atccaggacaaggagggcatcccacccgaccagcagcgcctcatcttcgccggcaagcag 3052 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || || ||||||||||| |||||| ||| || |||||| Sbjct: 3053 ctggaggatggccgcaccctggcggattacaacatccagaaggagagcactctccacctg 3112 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || |||||||| |||||||| || || | ||||||||||| Sbjct: 3113 gtgctccgcctcaggggtggcatgcagatttttgtgaagacattgactggcaagaccatc 3172 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||||||| | |||||||| ||| || ||||| ||||||||||||| Sbjct: 3173 accttggaggtggagagctctgacaccattgacaatgtgaaggccaagatccaggaca 3230 Score = 143 bits (72), Expect = 5e-31 Identities = 153/182 (84%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 ||||| ||||| ||||| ||| ||| |||||||||||||| | |||||||||||||| Sbjct: 3395 accataaccctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccag 3454 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 |||||||||||||| ||||||||||||||||||| ||||| || ||||| || || || Sbjct: 3455 gacaaggagggcatccccccggaccagcagcgtctgatcttcgccggcaaacagctggag 3514 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || || |||||||||||||| |||||| |||||| ||||| | |||| Sbjct: 3515 gatggccgcaccctagcagactacaacatccaaaaggagagcaccctccaccttgtgctc 3574 Query: 199 cg 200 || Sbjct: 3575 cg 3576 Score = 58.0 bits (29), Expect = 2e-05 Identities = 124/157 (78%), Gaps = 2/157 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||||| || || | |||||||| | Sbjct: 1994 atgcagatctttgtgaaaaccctgactggcaagactatcaccctcgaggtggagtcgtct 2053 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| || |||| | ||||| Sbjct: 2054 gacaccattgacaacgttaaggccaagatccaggacaa-ggagggcatccccccagacca 2112 Query: 334 gcagcagcctcatcttcgctggcaancattttgagga 370 ||||| | |||||||| |||||||| || ||||||| Sbjct: 2113 gcagc-ggctcatctttgctggcaaacagcttgagga 2148
>ref|XM_473982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 206 bits (104), Expect = 4e-50 Identities = 281/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| |||||||| |||||||| | ||||| ||| Sbjct: 712 ggcaagaccatcaccctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaag 771 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 772 atccaggacaaggagggtattccaccagaccagcagcgcctcatcttcgctggcaagcag 831 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 832 cttgaggatggtcgcacccttgcagattacaacatccagaaggagtccaccctgcacctt 891 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 892 gtcctgcgccttcgtggaggtatgcagatcttcgtgaagaccctcactggcaagaccatc 951 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | | ||||||||| ||| ||| ||||| ||||||||||| | Sbjct: 952 actctggaggttgagtcctctgacaccatcgacaacgtgaaggccaagatccaggataa- 1010 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| | |||||||||| ||||||||||||| ||||| Sbjct: 1011 ggagggcatccctccagaccagcagc-gcctcatcttcgccggcaa 1055 Score = 198 bits (100), Expect = 9e-48 Identities = 291/361 (80%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||| |||||||||||||| |||||||| | ||||| ||| Sbjct: 484 ggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggccaag 543 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 544 atccaggacaaggagggtattccaccagaccagcagcggctcatcttcgctggcaagcag 603 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || ||||||||||| |||||||| |||||||||||| | ||| || Sbjct: 604 cttgaggacggccgcacccttgctgactataacatccagaaggagtccaccttgcacttg 663 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 664 gtcctccgccttcgtggaggtatgcagatcttcgtgaagaccctcaccggcaagaccatc 723 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 724 accctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaagatccaggacaa- 782 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatg 372 ||| ||| | || | |||||||||| ||||||||||||||||||| || ||||||||| Sbjct: 783 ggagggtattccaccagaccagcagc-gcctcatcttcgctggcaagcagcttgaggatg 841 Query: 373 g 373 | Sbjct: 842 g 842 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| Sbjct: 940 ggcaagaccatcactctggaggttgagtcctctgacaccatcgacaacgtgaaggccaag 999 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 1000 atccaggataaggagggcatccctccagaccagcagcgcctcatcttcgccggcaagcag 1059 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 1060 ctcgaggatggccgcacccttgccgactataacatccagaaggagtccaccctgcacct 1118 Score = 176 bits (89), Expect = 3e-41 Identities = 286/358 (79%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct: 256 ggcaagaccattaccctggaggtcgagtcctccgacacgatcgataatgtgaaggccaag 315 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || |||||||||||||||||||||||||| ||||| Sbjct: 316 atccaggacaaggagggaatcccaccagaccagcagcgtctcatctttgctgggaagcag 375 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 376 ctcgaggatggccgcacccttgcagactacaacatccaaaaggaatccaccctgcacctt 435 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || | ||||||||||||||||| ||||| | |||||||| || Sbjct: 436 gtcctgcgcctccggggcggtatgcagatctttgtgaagacccttactggcaagacgatc 495 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||| || | | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 496 accttggaggttgagtcctctgacacgatcgacaatgtgaaggccaagatccaggacaa- 554 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgagga 370 ||| ||| | || | |||||||||| | ||||||||||||||||| || ||||||| Sbjct: 555 ggagggtattccaccagaccagcagc-ggctcatcttcgctggcaagcagcttgagga 611 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||| ||| || || || ||||| | ||||| ||| Sbjct: 28 ggcaagaccatcaccttggaggttgagttctccgatacgattgacaatgtgaaggctaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||||||||| | ||||||||||| || || ||||| ||||||||||| Sbjct: 88 attcaggacaaggagggcatccctccggaccagcaacgccttatcttcgctggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| ||||| || || || || |||||||| |||||||||||| | ||||| Sbjct: 148 cttgaggatgggcgtactctcgcggattataacatccagaaggagtccaccttgcacct 206 Score = 46.1 bits (23), Expect = 0.081 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 321 tccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 107 tccctccggaccagcaac-gccttatcttcgctggcaagcagcttgaggatgg 158
>gb|BT016596.1| Zea mays clone Contig429 mRNA sequence Length = 980 Score = 206 bits (104), Expect = 4e-50 Identities = 244/298 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 322 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaag 381 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||||||||| ||||| Sbjct: 382 atccaggacaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 441 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || ||||| |||||||||||||| |||||| |||||| |||||| Sbjct: 442 cttgaggacgggcgcacgcttgccgactacaacatccagaaggagagcaccctccacctg 501 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || || |||||||||||||| |||||| | || || ||||| Sbjct: 502 gtgctccgcctcaggggtggtatccagatctttgtgaagaccctgactggaaaaaccata 561 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| || ||||||||||||||||||| Sbjct: 562 accctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccaggaca 619 Score = 200 bits (101), Expect = 2e-48 Identities = 278/343 (81%), Gaps = 2/343 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||||| ||||| ||| Sbjct: 94 ggcaagactatcaccctcgaggtggagtcgtctgacaccattgacaacgttaaggccaag 153 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| |||||||| |||||||| || Sbjct: 154 atccaggacaaggagggcatccccccagaccagcagcggctcatcttcgctggcaaacag 213 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || |||||||||||||||||||| |||||| |||||| ||||| Sbjct: 214 cttgaggacgggcgcacgcttgctgactacaacatccagaaggagagcaccctccacctt 273 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||||||||| |||||| | |||||||| || Sbjct: 274 gtgctccgcctcaggggaggcatgcagatctttgtgaaaaccctgaccggcaagactatc 333 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | | |||||||| ||| ||| ||||| ||||||||||||| Sbjct: 334 accctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatccaggacaa- 392 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| || ||||| | |||||||||| | |||||||| ||||| Sbjct: 393 ggagggcatccctccagaccagcagc-ggctcatctttgctgg 434 Score = 135 bits (68), Expect = 1e-28 Identities = 152/182 (83%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 ||||| ||||| ||||| ||| ||| |||||||||||||| | |||||||||||||| Sbjct: 556 accataaccctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccag 615 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 |||||||||||||| ||||||||||||||||||| ||||| || ||||| || || || Sbjct: 616 gacaaggagggcatccccccggaccagcagcgtctgatcttcgccggcaaacagctggag 675 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || | || |||||||||||||| |||||| |||||| ||||| | |||| Sbjct: 676 gatggccgcaccttagcagactacaacatccaaaaggagagcaccctccaccttgtgctc 735 Query: 199 cg 200 || Sbjct: 736 cg 737 Score = 65.9 bits (33), Expect = 9e-08 Identities = 125/157 (79%), Gaps = 2/157 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||||| || || | |||||||| | Sbjct: 67 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcgtct 126 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| || |||| | ||||| Sbjct: 127 gacaccattgacaacgttaaggccaagatccaggacaa-ggagggcatccccccagacca 185 Query: 334 gcagcagcctcatcttcgctggcaancattttgagga 370 ||||| | ||||||||||||||||| || ||||||| Sbjct: 186 gcagc-ggctcatcttcgctggcaaacagcttgagga 221
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 206 bits (104), Expect = 4e-50 Identities = 281/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| |||||||| |||||||| | ||||| ||| Sbjct: 31998382 ggcaagaccatcaccctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaag 31998441 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 31998442 atccaggacaaggagggtattccaccagaccagcagcgcctcatcttcgctggcaagcag 31998501 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 31998502 cttgaggatggtcgcacccttgcagattacaacatccagaaggagtccaccctgcacctt 31998561 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 31998562 gtcctgcgccttcgtggaggtatgcagatcttcgtgaagaccctcactggcaagaccatc 31998621 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | | ||||||||| ||| ||| ||||| ||||||||||| | Sbjct: 31998622 actctggaggttgagtcctctgacaccatcgacaacgtgaaggccaagatccaggataa- 31998680 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| | |||||||||| ||||||||||||| ||||| Sbjct: 31998681 ggagggcatccctccagaccagcagc-gcctcatcttcgccggcaa 31998725 Score = 198 bits (100), Expect = 9e-48 Identities = 291/361 (80%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||| |||||||||||||| |||||||| | ||||| ||| Sbjct: 31998154 ggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggccaag 31998213 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 31998214 atccaggacaaggagggtattccaccagaccagcagcggctcatcttcgctggcaagcag 31998273 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || ||||||||||| |||||||| |||||||||||| | ||| || Sbjct: 31998274 cttgaggacggccgcacccttgctgactataacatccagaaggagtccaccttgcacttg 31998333 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 31998334 gtcctccgccttcgtggaggtatgcagatcttcgtgaagaccctcaccggcaagaccatc 31998393 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 31998394 accctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaagatccaggacaa- 31998452 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatg 372 ||| ||| | || | |||||||||| ||||||||||||||||||| || ||||||||| Sbjct: 31998453 ggagggtattccaccagaccagcagc-gcctcatcttcgctggcaagcagcttgaggatg 31998511 Query: 373 g 373 | Sbjct: 31998512 g 31998512 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| Sbjct: 31998610 ggcaagaccatcactctggaggttgagtcctctgacaccatcgacaacgtgaaggccaag 31998669 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 31998670 atccaggataaggagggcatccctccagaccagcagcgcctcatcttcgccggcaagcag 31998729 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 31998730 ctcgaggatggccgcacccttgccgactataacatccagaaggagtccaccctgcacct 31998788 Score = 176 bits (89), Expect = 3e-41 Identities = 286/358 (79%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct: 31997926 ggcaagaccattaccctggaggtcgagtcctccgacacgatcgataatgtgaaggccaag 31997985 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || |||||||||||||||||||||||||| ||||| Sbjct: 31997986 atccaggacaaggagggaatcccaccagaccagcagcgtctcatctttgctgggaagcag 31998045 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 31998046 ctcgaggatggccgcacccttgcagactacaacatccaaaaggaatccaccctgcacctt 31998105 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || | ||||||||||||||||| ||||| | |||||||| || Sbjct: 31998106 gtcctgcgcctccggggcggtatgcagatctttgtgaagacccttactggcaagacgatc 31998165 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||| || | | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 31998166 accttggaggttgagtcctctgacacgatcgacaatgtgaaggccaagatccaggacaa- 31998224 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgagga 370 ||| ||| | || | |||||||||| | ||||||||||||||||| || ||||||| Sbjct: 31998225 ggagggtattccaccagaccagcagc-ggctcatcttcgctggcaagcagcttgagga 31998281 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||| ||| || || || ||||| | ||||| ||| Sbjct: 31997698 ggcaagaccatcaccttggaggttgagttctccgatacgattgacaatgtgaaggctaag 31997757 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||||||||| | ||||||||||| || || ||||| ||||||||||| Sbjct: 31997758 attcaggacaaggagggcatccctccggaccagcaacgccttatcttcgctggcaagcag 31997817 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| ||||| || || || || |||||||| |||||||||||| | ||||| Sbjct: 31997818 cttgaggatgggcgtactctcgcggattataacatccagaaggagtccaccttgcacct 31997876 Score = 46.1 bits (23), Expect = 0.081 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 321 tccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 31997777 tccctccggaccagcaac-gccttatcttcgctggcaagcagcttgaggatgg 31997828
>dbj|AK102389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E11, full insert sequence Length = 2497 Score = 206 bits (104), Expect = 4e-50 Identities = 281/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| |||||||| |||||||| | ||||| ||| Sbjct: 1921 ggcaagaccatcaccctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaag 1980 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 1981 atccaggacaaggagggtattccaccagaccagcagcgcctcatcttcgctggcaagcag 2040 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 2041 cttgaggatggtcgcacccttgcagattacaacatccagaaggagtccaccctgcacctt 2100 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 2101 gtcctgcgccttcgtggaggtatgcagatcttcgtgaagaccctcactggcaagaccatc 2160 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | | ||||||||| ||| ||| ||||| ||||||||||| | Sbjct: 2161 actctggaggttgagtcctctgacaccatcgacaacgtgaaggccaagatccaggataa- 2219 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| | |||||||||| ||||||||||||| ||||| Sbjct: 2220 ggagggcatccctccagaccagcagc-gcctcatcttcgccggcaa 2264 Score = 198 bits (100), Expect = 9e-48 Identities = 291/361 (80%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||| |||||||||||||| |||||||| | ||||| ||| Sbjct: 1693 ggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggccaag 1752 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 1753 atccaggacaaggagggtattccaccagaccagcagcggctcatcttcgctggcaagcag 1812 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || ||||||||||| |||||||| |||||||||||| | ||| || Sbjct: 1813 cttgaggacggccgcacccttgctgactataacatccagaaggagtccaccttgcacttg 1872 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1873 gtcctccgccttcgtggaggtatgcagatcttcgtgaagaccctcaccggcaagaccatc 1932 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 1933 accctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaagatccaggacaa- 1991 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatg 372 ||| ||| | || | |||||||||| ||||||||||||||||||| || ||||||||| Sbjct: 1992 ggagggtattccaccagaccagcagc-gcctcatcttcgctggcaagcagcttgaggatg 2050 Query: 373 g 373 | Sbjct: 2051 g 2051 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| Sbjct: 2149 ggcaagaccatcactctggaggttgagtcctctgacaccatcgacaacgtgaaggccaag 2208 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 2209 atccaggataaggagggcatccctccagaccagcagcgcctcatcttcgccggcaagcag 2268 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 2269 ctcgaggatggccgcacccttgccgactataacatccagaaggagtccaccctgcacct 2327 Score = 161 bits (81), Expect = 2e-36 Identities = 285/358 (79%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct: 1466 ggcaagaccattaccctggaggtcgagtcctccgacacgatcgataatgtgaaggccaag 1525 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || ||| |||||||||||||||||||||| ||||| Sbjct: 1526 atccaggacaaggagggaatcccaccagac-agcagcgtctcatctttgctgggaagcag 1584 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 1585 ctcgaggatggccgcacccttgcagactacaacatccaaaaggaatccaccctgcacctt 1644 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || | ||||||||||||||||| ||||| | |||||||| || Sbjct: 1645 gtcctgcgcctccggggcggtatgcagatctttgtgaagacccttactggcaagacgatc 1704 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||| || | | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 1705 accttggaggttgagtcctctgacacgatcgacaatgtgaaggccaagatccaggacaa- 1763 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgagga 370 ||| ||| | || | |||||||||| | ||||||||||||||||| || ||||||| Sbjct: 1764 ggagggtattccaccagaccagcagc-ggctcatcttcgctggcaagcagcttgagga 1820 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||| ||| || || || ||||| | ||||| ||| Sbjct: 1238 ggcaagaccatcaccttggaggttgagttctccgatacgattgacaatgtgaaggctaag 1297 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||||||||| | ||||||||||| || || ||||| ||||||||||| Sbjct: 1298 attcaggacaaggagggcatccctccggaccagcaacgccttatcttcgctggcaagcag 1357 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| ||||| || || || || |||||||| |||||||||||| | ||||| Sbjct: 1358 cttgaggatgggcgtactctcgcggattataacatccagaaggagtccaccttgcacct 1416 Score = 46.1 bits (23), Expect = 0.081 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 321 tccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 1317 tccctccggaccagcaac-gccttatcttcgctggcaagcagcttgaggatgg 1368
>dbj|D12776.1|RICPOLYUBI Oryza sativa (japonica cultivar-group) mRNA for poly-ubiquitin, partial cds Length = 744 Score = 206 bits (104), Expect = 4e-50 Identities = 281/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| |||||||| |||||||| | ||||| ||| Sbjct: 136 ggcaagaccatcaccctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaag 195 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 196 atccaggacaaggagggtattccaccagaccagcagcgcctcatcttcgctggcaagcag 255 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 256 cttgaggatggtcgcacccttgcagattacaacatccagaaggagtccaccctgcacctt 315 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 316 gtcctgcgccttcgtggaggtatgcagatcttcgtgaagaccctcactggcaagaccatc 375 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | | ||||||||| ||| ||| ||||| ||||||||||| | Sbjct: 376 actctggaggttgagtcctctgacaccatcgacaacgtgaaggccaagatccaggataa- 434 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| | |||||||||| ||||||||||||| ||||| Sbjct: 435 ggagggcatccctccagaccagcagc-gcctcatcttcgccggcaa 479 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| Sbjct: 364 ggcaagaccatcactctggaggttgagtcctctgacaccatcgacaacgtgaaggccaag 423 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 424 atccaggataaggagggcatccctccagaccagcagcgcctcatcttcgccggcaagcag 483 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 484 ctcgaggatggccgcacccttgccgactataacatccagaaggagtccaccctgcacct 542 Score = 121 bits (61), Expect = 2e-24 Identities = 212/268 (79%), Gaps = 2/268 (0%) Strand = Plus / Plus Query: 106 cagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaac 165 ||||| |||||||| ||||||||||| ||||| || ||||| || ||||||||||| ||| Sbjct: 1 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 60 Query: 166 atccanaaggagtccaccctncacctggagctccgncttcnnnnnnnnatgcagatcttt 225 ||||| |||||||||||| | ||| ||| ||||| |||| ||||||||||| Sbjct: 61 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 120 Query: 226 gtgaanaccctgncgggcaagaccatnacattggaggtggantncctggacaccatccac 285 ||||| ||||| | ||||||||||| || ||||||| || | ||||| ||| || Sbjct: 121 gtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacacgatcgac 180 Query: 286 ancgtnaaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctca 345 | || ||||| ||||||||||||| ||| ||| | || | |||||||||| |||||| Sbjct: 181 aatgtgaaggccaagatccaggacaa-ggagggtattccaccagaccagcagc-gcctca 238 Query: 346 tcttcgctggcaancattttgaggatgg 373 ||||||||||||| || |||||||||| Sbjct: 239 tcttcgctggcaagcagcttgaggatgg 266
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 206 bits (104), Expect = 4e-50 Identities = 281/346 (81%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| |||||||| |||||||| | ||||| ||| Sbjct: 19089 ggcaagaccatcaccctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaag 19148 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 19149 atccaggacaaggagggtattccaccagaccagcagcgcctcatcttcgctggcaagcag 19208 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 19209 cttgaggatggtcgcacccttgcagattacaacatccagaaggagtccaccctgcacctt 19268 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 19269 gtcctgcgccttcgtggaggtatgcagatcttcgtgaagaccctcactggcaagaccatc 19328 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | | ||||||||| ||| ||| ||||| ||||||||||| | Sbjct: 19329 actctggaggttgagtcctctgacaccatcgacaacgtgaaggccaagatccaggataa- 19387 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| | |||||||||| ||||||||||||| ||||| Sbjct: 19388 ggagggcatccctccagaccagcagc-gcctcatcttcgccggcaa 19432 Score = 198 bits (100), Expect = 9e-48 Identities = 291/361 (80%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||| |||||||||||||| |||||||| | ||||| ||| Sbjct: 18861 ggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggccaag 18920 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 18921 atccaggacaaggagggtattccaccagaccagcagcggctcatcttcgctggcaagcag 18980 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || ||||||||||| |||||||| |||||||||||| | ||| || Sbjct: 18981 cttgaggacggccgcacccttgctgactataacatccagaaggagtccaccttgcacttg 19040 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 19041 gtcctccgccttcgtggaggtatgcagatcttcgtgaagaccctcaccggcaagaccatc 19100 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 19101 accctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaagatccaggacaa- 19159 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatg 372 ||| ||| | || | |||||||||| ||||||||||||||||||| || ||||||||| Sbjct: 19160 ggagggtattccaccagaccagcagc-gcctcatcttcgctggcaagcagcttgaggatg 19218 Query: 373 g 373 | Sbjct: 19219 g 19219 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| Sbjct: 19317 ggcaagaccatcactctggaggttgagtcctctgacaccatcgacaacgtgaaggccaag 19376 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 19377 atccaggataaggagggcatccctccagaccagcagcgcctcatcttcgccggcaagcag 19436 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 19437 ctcgaggatggccgcacccttgccgactataacatccagaaggagtccaccctgcacct 19495 Score = 176 bits (89), Expect = 3e-41 Identities = 286/358 (79%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct: 18633 ggcaagaccattaccctggaggtcgagtcctccgacacgatcgataatgtgaaggccaag 18692 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || |||||||||||||||||||||||||| ||||| Sbjct: 18693 atccaggacaaggagggaatcccaccagaccagcagcgtctcatctttgctgggaagcag 18752 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 18753 ctcgaggatggccgcacccttgcagactacaacatccaaaaggaatccaccctgcacctt 18812 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || | ||||||||||||||||| ||||| | |||||||| || Sbjct: 18813 gtcctgcgcctccggggcggtatgcagatctttgtgaagacccttactggcaagacgatc 18872 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||| || | | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 18873 accttggaggttgagtcctctgacacgatcgacaatgtgaaggccaagatccaggacaa- 18931 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgagga 370 ||| ||| | || | |||||||||| | ||||||||||||||||| || ||||||| Sbjct: 18932 ggagggtattccaccagaccagcagc-ggctcatcttcgctggcaagcagcttgagga 18988 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||| ||| || || || ||||| | ||||| ||| Sbjct: 18405 ggcaagaccatcaccttggaggttgagttctccgatacgattgacaatgtgaaggctaag 18464 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||||||||| | ||||||||||| || || ||||| ||||||||||| Sbjct: 18465 attcaggacaaggagggcatccctccggaccagcaacgccttatcttcgctggcaagcag 18524 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| ||||| || || || || |||||||| |||||||||||| | ||||| Sbjct: 18525 cttgaggatgggcgtactctcgcggattataacatccagaaggagtccaccttgcacct 18583 Score = 46.1 bits (23), Expect = 0.081 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 321 tccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 18484 tccctccggaccagcaac-gccttatcttcgctggcaagcagcttgaggatgg 18535
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 202 bits (102), Expect = 6e-49 Identities = 175/200 (87%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 182 agaccctgac-gggcaagaccatcacgctggaggtggagtcctcggacaccatcgacaac 240 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 241 gtcaaggccaagatccaggacaaggagggcatcccgccggaccagcagcgcctcatcttc 300 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || || ||||| || || || ||||| || || || |||||||||||||| ||||||||| Sbjct: 301 gccggtaagcagctcgaggacggccgcaccctcgccgactacaacatccagaaggagtcc 360 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 361 accctccacctggtgctccg 380 Score = 107 bits (54), Expect = 3e-20 Identities = 117/139 (84%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| ||||||||||||| || |||||||||| | | | Sbjct: 166 atgcagatcttcgtgaagaccctgacgggcaagaccatcacgctggaggtggagtcctcg 225 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 226 gacaccatcgacaacgtcaaggccaagatccaggacaa-ggagggcatcccgccggacca 284 Query: 334 gcagcagcctcatcttcgc 352 ||||| ||||||||||||| Sbjct: 285 gcagc-gcctcatcttcgc 302
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 202 bits (102), Expect = 6e-49 Identities = 165/188 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||||||||||||||||||||| | |||||||| Sbjct: 28 ggcaagaccatcaccctggaggttgagtcctctgacaccatcgacaatgtgaaggcgaaa 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||||||||||||||| || ||||| ||||| ||||| Sbjct: 88 atccaggacaaggagggcattcccccggaccagcagcgcctgatcttcgctggtaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || || || ||||| |||||||| |||||||||||||| ||| || Sbjct: 148 cttgaggatggccgcaccctggcggactataacatccagaaggagtccacccttcacttg 207 Query: 193 gagctccg 200 | |||||| Sbjct: 208 gtgctccg 215 Score = 56.0 bits (28), Expect = 8e-05 Identities = 126/160 (78%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||| || |||||||| ||||| | ||||||||||| || ||||||| || | | Sbjct: 1 atgcaaatttttgtgaagaccctcaccggcaagaccatcaccctggaggttgagtcctct 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| || |||||||| |||||||||| ||| || | || ||||||| Sbjct: 61 gacaccatcgacaatgtgaaggcgaaaatccaggacaa-ggagggcattcccccggacca 119 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||| ||||||||||| || || |||||||||| Sbjct: 120 gcagc-gcctgatcttcgctggtaagcagcttgaggatgg 158
>gb|M60175.1|BLYMUB1 Barley ubiquitin (mub1) gene, complete cds Length = 1815 Score = 202 bits (102), Expect = 6e-49 Identities = 175/200 (87%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||||||||||||||| || ||||||||||| || ||||||||||||||| Sbjct: 575 agaccctgac-gggcaagaccatcacgctggaggtggagtcgtcggacaccatcgacaac 633 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 634 gtcaaggccaagatccaggacaaggagggcatcccgccggaccagcagcgcctcatcttc 693 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || ||||| || || || |||||||||||||| ||||||||| Sbjct: 694 gccggcaagcagctcgaggacggccgcaccctcgccgactacaacatccagaaggagtcc 753 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 754 accctccacctggtgctccg 773 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| ||||||||||||| || |||||||||| | | Sbjct: 559 atgcagatcttcgtgaagaccctgacgggcaagaccatcacgctggaggtggagtcgtcg 618 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 619 gacaccatcgacaacgtcaaggccaagatccaggacaa-ggagggcatcccgccggacca 677 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 678 gcagc-gcctcatcttcgccggcaa 701
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 200 bits (101), Expect = 2e-48 Identities = 253/310 (81%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||| |||||||| ||||||||||| ||||||||||| |||||| Sbjct: 2815 agaccctgaccgg-caagactatcaccctcgaggtggagtcgtctgacaccattgacaac 2873 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| |||| ||||||||||| ||||||||| Sbjct: 2874 gttaaggccaagatccaggacaaggagggcatccccccagaccagcagcggctcatcttt 2933 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 |||||||| || ||||| || || || || |||||||||||||||||||| |||||| | Sbjct: 2934 gctggcaaacagcttgaggacgggcgcacgcttgctgactacaacatccagaaggagagc 2993 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | |||||| || ||||||||||||||||| |||||| | Sbjct: 2994 accctccaccttgtgctccgtctcaggggaggcatgcagatctttgtgaaaaccctgacc 3053 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 |||||||| || || | |||||||| | ||||||||| ||| || ||||| ||| Sbjct: 3054 ggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaatgtcaaggccaag 3113 Query: 301 atccaggaca 310 |||||||||| Sbjct: 3114 atccaggaca 3123 Score = 198 bits (100), Expect = 9e-48 Identities = 243/298 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||||| ||||| ||| Sbjct: 2370 ggcaagactatcaccctcgaggtggagtcgtctgacaccattgacaacgttaaggccaag 2429 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||| || Sbjct: 2430 atccaggacaaggagggcatccccccagaccagcagcggctcatctttgctggcaaacag 2489 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || |||||||||||||||||||| |||||| |||||| ||||| Sbjct: 2490 cttgaggacgggcgcacgcttgctgactacaacatccagaaggagagcaccctccacctt 2549 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||||||||| ||| || | |||||||| || Sbjct: 2550 gtgctccgtctcaggggaggcatgcagatctttgtgaaaaccttgaccggcaagactatc 2609 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 2610 accctcgaggtggagtcttcagacaccatcgacaacgtcaaggccaagatccaggaca 2667 Score = 192 bits (97), Expect = 6e-46 Identities = 288/358 (80%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| || |||||||||||||||| |||||| ||| Sbjct: 2598 ggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaacgtcaaggccaag 2657 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| ||||||||||| |||||||||||||| ||||| Sbjct: 2658 atccaggacaaggagggcattcccccagaccagcagcggctcatctttgctggaaagcag 2717 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || ||||| |||||||||||||| |||||| |||||| ||| || Sbjct: 2718 cttgaggacgggcgcacgcttgccgactacaacatccagaaggagagcaccctccacttg 2777 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| |||||| | |||||||| || Sbjct: 2778 gtgctgcgcctcaggggaggcatgcagatcttcgtgaagaccctgaccggcaagactatc 2837 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | |||||||| ||| ||| ||||| ||||||||||||| Sbjct: 2838 accctcgaggtggagtcgtctgacaccattgacaacgttaaggccaagatccaggacaa- 2896 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgagga 370 ||| || |||| | |||||||||| | |||||||| |||||||| || ||||||| Sbjct: 2897 ggagggcatccccccagaccagcagc-ggctcatctttgctggcaaacagcttgagga 2953 Score = 178 bits (90), Expect = 8e-42 Identities = 162/188 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| || |||||||||||||| | |||||| ||| Sbjct: 3054 ggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaatgtcaaggccaag 3113 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | ||||||||||||||| | ||||| ||||||||||| Sbjct: 3114 atccaggacaaggagggcatcccaccggaccagcagcgtttgatcttcgctggcaagcag 3173 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| || ||||||||||| |||||| |||||| |||||| Sbjct: 3174 ctggaggatggccgcacccttgcggattacaacatccagaaggagagcaccctccacctg 3233 Query: 193 gagctccg 200 | |||||| Sbjct: 3234 gtgctccg 3241 Score = 174 bits (88), Expect = 1e-40 Identities = 240/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| |||||||||||| ||||| | ||||| ||| Sbjct: 3510 ggcaagaccatcaccttggaggtggagagctctgacaccattgacaatgtgaaggccaag 3569 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| |||||||||||||| |||||||| |||||||| Sbjct: 3570 atccaggacaaggagggcattcccccagaccagcagcgtctgatctttgcgggcaagcag 3629 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| |||||| ||||| Sbjct: 3630 ctggaggatggccgcactctcgcggactacaacatccagaaggagagcacccttcacctt 3689 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || |||||||||||||| || |||||| | || || ||||| Sbjct: 3690 gttctccgcctcagaggtggtatgcagatctttgtaaagaccctgactggaaaaaccata 3749 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | |||||||||| ||| || ||||||||||||||||||| Sbjct: 3750 accctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccaggaca 3807 Score = 143 bits (72), Expect = 5e-31 Identities = 153/182 (84%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 ||||| ||||| ||||| ||| ||| |||||||||||||| | |||||||||||||| Sbjct: 3744 accataaccctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccag 3803 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 |||||||||||||| ||||||||||||||||||| ||||| || ||||| || || || Sbjct: 3804 gacaaggagggcatccccccggaccagcagcgtctgatcttcgccggcaaacagctggag 3863 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || || |||||||||||||| |||||| |||||| ||||| | |||| Sbjct: 3864 gatggccgcaccctagcagactacaacatccaaaaggagagcaccctccaccttgtgctc 3923 Query: 199 cg 200 || Sbjct: 3924 cg 3925 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || || ||||| ||||| | |||||| ||| Sbjct: 3282 ggcaagacaatcacccttgaggtggagtcttcggataccattgacaatgtcaaggccaag 3341 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 3342 atccaggacaaggagggcatcccacccgaccagcagcgcctcatcttcgccggcaagcag 3401 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || || ||||||||||| |||||| ||| || |||||| Sbjct: 3402 ctggaggatggccgcaccctggcggattacaacatccagaaggagagcactctccacctg 3461 Query: 193 g 193 | Sbjct: 3462 g 3462 Score = 58.0 bits (29), Expect = 2e-05 Identities = 124/157 (78%), Gaps = 2/157 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||||| || || | |||||||| | Sbjct: 2343 atgcagatctttgtgaaaaccctgactggcaagactatcaccctcgaggtggagtcgtct 2402 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| || |||| | ||||| Sbjct: 2403 gacaccattgacaacgttaaggccaagatccaggacaa-ggagggcatccccccagacca 2461 Query: 334 gcagcagcctcatcttcgctggcaancattttgagga 370 ||||| | |||||||| |||||||| || ||||||| Sbjct: 2462 gcagc-ggctcatctttgctggcaaacagcttgagga 2497 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||| |||||||| || || | ||||||||||| || ||||||||||| | Sbjct: 3483 atgcagatttttgtgaagacattgactggcaagaccatcaccttggaggtggagagctct 3542 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 |||||||| ||| || ||||| ||||||||||||| Sbjct: 3543 gacaccattgacaatgtgaaggccaagatccaggaca 3579
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 198 bits (100), Expect = 9e-48 Identities = 243/298 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 591 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaag 650 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||||||||| ||||| Sbjct: 651 atccaggacaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 710 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || || || |||||||||||||| |||||| |||||| |||||| Sbjct: 711 cttgaggacggccgcaccctggccgactacaacatccagaaggagagcaccctccacctg 770 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||| ||||| || || | ||||||||||| Sbjct: 771 gtgctccgcctcaggggaggcatgcagatcttcgtgaagacattgactggcaagaccatc 830 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||||||| | |||||||| ||| || ||||| ||||||||||||| Sbjct: 831 accttggaggtggagagctctgacaccattgacaatgtgaaggccaagatccaggaca 888 Score = 163 bits (82), Expect = 5e-37 Identities = 143/165 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| |||||||||||| ||||| | ||||| ||| Sbjct: 819 ggcaagaccatcaccttggaggtggagagctctgacaccattgacaatgtgaaggccaag 878 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||| Sbjct: 879 atccaggacaaggagggcattcccccagaccagcagcgtctgatctttgctggcaagcag 938 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggag 177 || || ||||| || || || || |||||||||||||| |||||| Sbjct: 939 ctggaggatggtcgcaccctcgcggactacaacatccagaaggag 983 Score = 135 bits (68), Expect = 1e-28 Identities = 152/182 (83%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 ||||| ||||| ||||| ||| ||| |||||||||||||| | |||||||||||||| Sbjct: 1053 accataaccctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccag 1112 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 |||||||||||||| ||||||||||||||||||| ||||| || ||||| || || || Sbjct: 1113 gacaaggagggcatccccccggaccagcagcgtctgatcttcgccggcaaacagctggag 1172 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || | || |||||||||||||| |||||| |||||| ||||| | |||| Sbjct: 1173 gatggccgcaccttagcagactacaacatccaaaaggagagcaccctccaccttgtgctc 1232 Query: 199 cg 200 || Sbjct: 1233 cg 1234 Score = 77.8 bits (39), Expect = 2e-11 Identities = 160/205 (78%), Gaps = 2/205 (0%) Strand = Plus / Plus Query: 151 cttgctgactacaacatccanaaggagtccaccctncacctggagctccgncttcnnnnn 210 |||||||||||||||||||| |||||| |||||| ||||| | |||||| || Sbjct: 501 cttgctgactacaacatccagaaggagagcaccctccaccttgtgctccgcctcagggga 560 Query: 211 nnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantnc 270 ||||||||||||||||| |||||| | |||||||| || || | |||||||| | | Sbjct: 561 ggcatgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcc 620 Query: 271 ctggacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncgga 330 |||||||| ||| ||| ||||| ||||||||||||| ||| || ||||| | || Sbjct: 621 tctgacaccattgacaacgtcaaggccaagatccaggacaa-ggagggcatccctccaga 679 Query: 331 ccagcagcagcctcatcttcgctgg 355 |||||||| | |||||||| ||||| Sbjct: 680 ccagcagc-ggctcatctttgctgg 703 Score = 63.9 bits (32), Expect = 3e-07 Identities = 79/97 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | || || ||||| || ||||||| || | | Sbjct: 1020 atgcagatctttgtgaagaccctgactggaaaaaccataaccctggaggttgagagctcg 1079 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||||||||||||||||| Sbjct: 1080 gacaccatcgacaatgtgaaggcgaagatccaggaca 1116
>gb|AY954394.1| Oryza sativa (japonica cultivar-group) polyubiquitin (rubi3) gene, promoter region and complete cds Length = 3733 Score = 198 bits (100), Expect = 9e-48 Identities = 280/346 (80%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||| |||||||| |||||||| | ||||| ||| Sbjct: 3228 ggcaagaccatcaccctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaag 3287 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| ||| |||| ||||||||||| Sbjct: 3288 atccaggacaaggagggtattccaccagaccagcagcgcctcgtcttcgctggcaagcag 3347 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 3348 cttgaggatggtcgcacccttgcagattacaacatccagaaggagtccaccctgcacctt 3407 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 3408 gtcctgcgccttcgtggaggtatgcagatcttcgtgaagaccctcactggcaagaccatc 3467 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | | ||||||||| ||| ||| ||||| ||||||||||| | Sbjct: 3468 actctggaggttgagtcctctgacaccatcgacaacgtgaaggccaagatccaggataa- 3526 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| | |||||||||| ||||||||||||| ||||| Sbjct: 3527 ggagggcatccctccagaccagcagc-gcctcatcttcgccggcaa 3571 Score = 190 bits (96), Expect = 2e-45 Identities = 290/361 (80%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||| |||||||||||||| |||||||| | ||||| ||| Sbjct: 3000 ggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggccaag 3059 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 3060 atccaggacaaggagggtattccaccagaccagcagcggctcatcttcgctggcaagcag 3119 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || ||||||||||| |||||||| |||||||||||| | ||| || Sbjct: 3120 cttgaggacggccgcacccttgctgactataacatccagaaggagtccaccttgcacttg 3179 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 3180 gtcctccgccttcgtggaggtatgcagatcttcgtgaagaccctcaccggcaagaccatc 3239 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 3240 accctggaggttgagtcgtctgacacgatcgacaatgtgaaggccaagatccaggacaa- 3298 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatg 372 ||| ||| | || | |||||||||| ||||| ||||||||||||| || ||||||||| Sbjct: 3299 ggagggtattccaccagaccagcagc-gcctcgtcttcgctggcaagcagcttgaggatg 3357 Query: 373 g 373 | Sbjct: 3358 g 3358 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| Sbjct: 3456 ggcaagaccatcactctggaggttgagtcctctgacaccatcgacaacgtgaaggccaag 3515 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 3516 atccaggataaggagggcatccctccagaccagcagcgcctcatcttcgccggcaagcag 3575 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 3576 ctcgaggatggccgcacccttgccgactataacatccagaaggagtccaccctgcacct 3634 Score = 176 bits (89), Expect = 3e-41 Identities = 286/358 (79%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct: 2772 ggcaagaccattaccctggaggtcgagtcctccgacacgatcgataatgtgaaggccaag 2831 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || |||||||||||||||||||||||||| ||||| Sbjct: 2832 atccaggacaaggagggaatcccaccagaccagcagcgtctcatctttgctgggaagcag 2891 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 2892 ctcgaggatggccgcacccttgcagactacaacatccaaaaggaatccaccctgcacctt 2951 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || | ||||||||||||||||| ||||| | |||||||| || Sbjct: 2952 gtcctgcgcctccggggcggtatgcagatctttgtgaagacccttactggcaagacgatc 3011 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||| || | | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 3012 accttggaggttgagtcctctgacacgatcgacaatgtgaaggccaagatccaggacaa- 3070 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgagga 370 ||| ||| | || | |||||||||| | ||||||||||||||||| || ||||||| Sbjct: 3071 ggagggtattccaccagaccagcagc-ggctcatcttcgctggcaagcagcttgagga 3127 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||| ||| || || || ||||| | ||||| ||| Sbjct: 2544 ggcaagaccatcaccttggaggttgagttctccgatacgattgacaatgtgaaggctaag 2603 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||||||||| | ||||||||||| || || ||||| ||||||||||| Sbjct: 2604 attcaggacaaggagggcatccctccggaccagcaacgccttatcttcgctggcaagcag 2663 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| ||||| || || || || |||||||| |||||||||||| | ||||| Sbjct: 2664 cttgaggatgggcgtactctcgcggattataacatccagaaggagtccaccttgcacct 2722 Score = 46.1 bits (23), Expect = 0.081 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 321 tccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 2623 tccctccggaccagcaac-gccttatcttcgctggcaagcagcttgaggatgg 2674
>dbj|AK058319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A10, full insert sequence Length = 1421 Score = 198 bits (100), Expect = 9e-48 Identities = 280/346 (80%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| | ||| ||||| |||||||| |||||||| | ||||| ||| Sbjct: 779 ggcaagaccatcaccctgggggttgagtcgtctgacacgatcgacaatgtgaaggccaag 838 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 839 atccaggacaaggagggtattccaccagaccagcagcgcctcatcttcgctggcaagcag 898 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 899 cttgaggatggtcgcacccttgcagattacaacatccagaaggagtccaccctgcacctt 958 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 959 gtcctgcgccttcgtggaggtatgcagatcttcgtgaagaccctcactggcaagaccatc 1018 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||||||| || | | ||||||||| ||| ||| ||||| ||||||||||| | Sbjct: 1019 actctggaggttgagtcctctgacaccatcgacaacgtgaaggccaagatccaggataa- 1077 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || ||||| | |||||||||| ||||||||||||| ||||| Sbjct: 1078 ggagggcatccctccagaccagcagc-gcctcatcttcgccggcaa 1122 Score = 190 bits (96), Expect = 2e-45 Identities = 290/361 (80%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||| |||||||||||||| |||||||| | ||||| ||| Sbjct: 551 ggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggccaag 610 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| | || ||||||||||| |||||||| ||||||||||| Sbjct: 611 atccaggacaaggagggtattccaccagaccagcagcggctcatcttcgctggcaagcag 670 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || ||||||||||| |||||||| |||||||||||| | ||| || Sbjct: 671 cttgaggacggccgcacccttgctgactataacatccagaaggagtccaccttgcacttg 730 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| |||| ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 731 gtcctccgccttcgtggaggtatgcagatcttcgtgaagaccctcaccggcaagaccatc 790 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || ||| ||| || | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 791 accctgggggttgagtcgtctgacacgatcgacaatgtgaaggccaagatccaggacaa- 849 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatg 372 ||| ||| | || | |||||||||| ||||||||||||||||||| || ||||||||| Sbjct: 850 ggagggtattccaccagaccagcagc-gcctcatcttcgctggcaagcagcttgaggatg 908 Query: 373 g 373 | Sbjct: 909 g 909 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| ||| Sbjct: 1007 ggcaagaccatcactctggaggttgagtcctctgacaccatcgacaacgtgaaggccaag 1066 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 1067 atccaggataaggagggcatccctccagaccagcagcgcctcatcttcgccggcaagcag 1126 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 1127 ctcgaggatggccgcacccttgccgactataacatccagaaggagtccaccctgcacct 1185 Score = 168 bits (85), Expect = 8e-39 Identities = 285/358 (79%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct: 323 ggcaagaccattaccctggaggtcgagtcctccgacacgatcgataatgtgaaggccaag 382 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || |||||||||||||||||||||||||| ||||| Sbjct: 383 atccaggacaaggagggaatcccaccagaccagcagcgtctcatctttgctgggaagcag 442 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 443 ctcgaggatggccgcacccttgcagactacaacatccaaaaggaatccaccctgcacctt 502 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || | |||||||||||||| || ||||| | |||||||| || Sbjct: 503 gtcctgcgcctccggggcggtatgcagatctttgtaaagacccttactggcaagacgatc 562 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||| || | | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 563 accttggaggttgagtcctctgacacgatcgacaatgtgaaggccaagatccaggacaa- 621 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaancattttgagga 370 ||| ||| | || | |||||||||| | ||||||||||||||||| || ||||||| Sbjct: 622 ggagggtattccaccagaccagcagc-ggctcatcttcgctggcaagcagcttgagga 678 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||| ||| || || || ||||| | ||||| ||| Sbjct: 95 ggcaagaccatcaccttggaggttgagttctccgatacgattgacaatgtgaaggctaag 154 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||||||||| | ||||||||||| || || ||||| ||||||||||| Sbjct: 155 attcaggacaaggagggcatccctccggaccagcaacgccttatcttcgctggcaagcag 214 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| ||||| || || || || |||||||| |||||||||||| | ||||| Sbjct: 215 cttgaggatgggcgtactctcgcggattataacatccagaaggagtccaccttgcacct 273 Score = 46.1 bits (23), Expect = 0.081 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 321 tccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 174 tccctccggaccagcaac-gccttatcttcgctggcaagcagcttgaggatgg 225
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 192 bits (97), Expect = 6e-46 Identities = 289/358 (80%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 100 agaccctgactgg-caagactatcaccctcgaggtggagtcttcagacaccatcgacaac 158 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | ||||||||||||||| | ||||| Sbjct: 159 gtcaaggccaagatccaggacaaggagggcatcccaccggaccagcagcgtttgatcttc 218 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || |||||||| || ||||| || ||||||||||| |||||| | Sbjct: 219 gctggcaagcagctggaggatggccgcacccttgcggattacaacatccagaaggagagc 278 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| |||||| || ||||||||||||||||| || || | Sbjct: 279 accctccacctggtgctccgtctcaggggtggcatgcagatctttgtgaagacactcact 338 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 |||||||| || || | |||||||| | ||| ||||| ||| || ||||| ||| Sbjct: 339 ggcaagacaatcacccttgaggtggagtcttcggataccattgacaatgtcaaggccaag 398 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| || |||| |||||||||||| ||||||||||||| ||||| Sbjct: 399 atccaggacaa-ggagggcatcccaccggaccagcagc-gcctcatcttcgccggcaa 454 Score = 174 bits (88), Expect = 1e-40 Identities = 240/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || || ||||| ||||| | |||||| ||| Sbjct: 339 ggcaagacaatcacccttgaggtggagtcttcggataccattgacaatgtcaaggccaag 398 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | |||||||||||||| |||||||| || |||||||| Sbjct: 399 atccaggacaaggagggcatcccaccggaccagcagcgcctcatcttcgccggcaagcag 458 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || || |||||||||||||| |||||| |||||| |||||| Sbjct: 459 ctggaggatggccgcaccctggcggactacaacatccagaaggagagcaccctccacctg 518 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || |||||||| |||||||| || || | ||||||||||| Sbjct: 519 gtgctccgcctcaggggtggcatgcagatttttgtgaagacattgactggcaagaccatc 578 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||||||| | |||||||| ||| || ||||| ||||||||||||| Sbjct: 579 accttggaggtggagagctctgacaccattgacaatgtgaaggccaagatccaggaca 636 Score = 163 bits (82), Expect = 5e-37 Identities = 143/165 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| |||||||||||| ||||| | ||||| ||| Sbjct: 567 ggcaagaccatcaccttggaggtggagagctctgacaccattgacaatgtgaaggccaag 626 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||| Sbjct: 627 atccaggacaaggagggcattcccccagaccagcagcgtctgatctttgctggcaagcag 686 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggag 177 || || ||||| || || || || |||||||||||||| |||||| Sbjct: 687 ctggaggatggtcgcaccctcgcggactacaacatccagaaggag 731 Score = 143 bits (72), Expect = 5e-31 Identities = 153/182 (84%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 ||||| ||||| ||||| ||| ||| |||||||||||||| | |||||||||||||| Sbjct: 801 accataaccctggaggttgagagctcggacaccatcgacaatgtgaaggcgaagatccag 860 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 |||||||||||||| ||||||||||||||||||| ||||| || ||||| || || || Sbjct: 861 gacaaggagggcatccccccggaccagcagcgtctgatcttcgccggcaaacagctggag 920 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || | || |||||||||||||| |||||| |||||| ||||||| |||| Sbjct: 921 gatggccgcaccttagcagactacaacatccaaaaggagagcaccctccacctggtgctc 980 Query: 199 cg 200 || Sbjct: 981 cg 982 Score = 63.9 bits (32), Expect = 3e-07 Identities = 79/97 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | || || ||||| || ||||||| || | | Sbjct: 768 atgcagatctttgtgaagaccctgactggaaaaaccataaccctggaggttgagagctcg 827 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||||||||||||||||| Sbjct: 828 gacaccatcgacaatgtgaaggcgaagatccaggaca 864 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | |||||||| || || | |||||||| | Sbjct: 84 atgcagatcttcgtgaagaccctgactggcaagactatcaccctcgaggtggagtcttca 143 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 144 gacaccatcgacaacgtcaaggccaagatccaggaca 180
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 192 bits (97), Expect = 6e-46 Identities = 277/343 (80%), Gaps = 2/343 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| |||||||||| ||||||||||| ||||||| ||||| ||| Sbjct: 99 ggcaagactatcaccctccaggtggagtcgtctgacaccattgacaacgttaaggccaag 158 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| |||||||| |||||||| || Sbjct: 159 atccaggacaaggagggcatccccccagaccagcagcggctcatcttcgctggcaaacag 218 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || |||||||||||||||||||| |||||| |||||| ||||| Sbjct: 219 cttgaggacgggcgcacgcttgctgactacaacatccagaaggagagcaccctccacctt 278 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||||||||| |||||| | |||||||| || Sbjct: 279 gtgctccgcctcaggggaggcatgcagatctttgtgaaaaccctgaccggcaagactatc 338 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | | |||||||| ||| ||| ||||| ||||||||||||| Sbjct: 339 accctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatccaggacaa- 397 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| || ||||| | |||||||||| | |||||||| ||||| Sbjct: 398 ggagggcatccctccagaccagcagc-ggctcatctttgctgg 439 Score = 182 bits (92), Expect = 5e-43 Identities = 241/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 327 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaag 386 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||||||||| ||||| Sbjct: 387 atccaggacaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 446 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || ||||| |||||||||||||| |||||| |||||| ||| || Sbjct: 447 cttgaggacgggcgcacgcttgccgactacaacatccagaaggagagcaccctccacttg 506 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| |||||| | ||||| || || Sbjct: 507 gtgctgcgcctcaggggaggcatgcagatcttcgtgaagaccctgaccggcaaaactatc 566 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 567 accctcgaggtggagtcttcagacaccatcgacaacgtcaaggccaagatccaggaca 624 Score = 172 bits (87), Expect = 5e-40 Identities = 154/177 (87%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| || |||||||| ||||||||||| || ||||||||||||||| Sbjct: 544 agaccctgaccgg-caaaactatcaccctcgaggtggagtcttcagacaccatcgacaac 602 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||||||| |||| ||||||||||| ||||||||| Sbjct: 603 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcggctcatcttt 662 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggag 177 ||||| ||||| ||||| || || || || || || |||||||||||||| |||||| Sbjct: 663 gctggaaagcagcttgaggacgggcgcacgctggccgactacaacatccagaaggag 719 Score = 113 bits (57), Expect = 4e-22 Identities = 112/132 (84%) Strand = Plus / Plus Query: 46 gacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggaccag 105 |||||||||||||| | |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 816 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 875 Query: 106 cagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaac 165 |||||||| ||||| || ||||| || || || |||||||| | | || ||||||||| Sbjct: 876 cagcgtctgatcttcgccggcaaacagctggaggatggccgccccttagcagactacaac 935 Query: 166 atccanaaggag 177 ||||| |||||| Sbjct: 936 atccaaaaggag 947 Score = 58.0 bits (29), Expect = 2e-05 Identities = 124/157 (78%), Gaps = 2/157 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||||| || || | ||||||| | Sbjct: 72 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctccaggtggagtcgtct 131 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| || |||| | ||||| Sbjct: 132 gacaccattgacaacgttaaggccaagatccaggacaa-ggagggcatccccccagacca 190 Query: 334 gcagcagcctcatcttcgctggcaancattttgagga 370 ||||| | ||||||||||||||||| || ||||||| Sbjct: 191 gcagc-ggctcatcttcgctggcaaacagcttgagga 226 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | || || ||||| | ||||||| || | | Sbjct: 756 atgcagatctttgtgaagaccctgactggaaaaaccatacccctggaggttgagagctcg 815 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||||||||||||||||| Sbjct: 816 gacaccatcgacaatgtgaaggcgaagatccaggaca 852
>ref|XM_475630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 17 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 75 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || |||||||||||||||| |||||||| Sbjct: 76 gtgaaggccaagatccaggacaaggaagggatccccccggaccagcagcgcctcatcttc 135 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| ||||||||| Sbjct: 136 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcc 195 Query: 181 accctncacctggagctccg 200 ||||| ||||| | |||||| Sbjct: 196 accctccacctcgtgctccg 215 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 1 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 61 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggaagggatccccccggacca 119 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 120 gcagc-gcctcatcttcgccggcaa 143
>gb|BT017060.1| Zea mays clone EL01N0358B03.c mRNA sequence Length = 795 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 118 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 176 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 177 gtgaaggccaagatccaggacaaggagggcatcccgccggaccagcagcgcctcatcttc 236 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| |||||||| Sbjct: 237 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcg 296 Query: 181 accctncacctggagctccg 200 || || ||||||| |||||| Sbjct: 297 acgctgcacctggtgctccg 316 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 102 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 161 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 162 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggagggcatcccgccggacca 220 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 221 gcagc-gcctcatcttcgccggcaa 244
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 104515 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 104573 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || |||||||||||||||| |||||||| Sbjct: 104574 gtgaaggccaagatccaggacaaggaagggatccccccggaccagcagcgcctcatcttc 104633 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| ||||||||| Sbjct: 104634 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcc 104693 Query: 181 accctncacctggagctccg 200 ||||| ||||| | |||||| Sbjct: 104694 accctccacctcgtgctccg 104713 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 104499 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 104558 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 104559 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggaagggatccccccggacca 104617 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 104618 gcagc-gcctcatcttcgccggcaa 104641
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| || |||||||| ||||||||||| || ||||||||||||||| Sbjct: 540 agaccctgaccgg-caaaactatcaccctcgaggtggagtcttcagacaccatcgacaac 598 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||||||| |||| ||||||||||| ||||||||| Sbjct: 599 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcggctcatcttt 658 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| ||||| || || || || || || |||||||||||||| |||||| | Sbjct: 659 gctggaaagcagcttgaggacgggcgcacgctggccgactacaacatccaaaaggagagc 718 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 719 accctccacctggtgctccg 738 Score = 186 bits (94), Expect = 3e-44 Identities = 278/344 (80%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcac-ccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 |||||||| ||||| ||| ||||||||||| ||||||||||| ||||||| ||||| || Sbjct: 94 ggcaagactatcactcctcgaggtggagtcgtctgacaccattgacaacgttaaggccaa 153 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| |||||||||||||| |||| ||||||||||| |||||||| |||||||| || Sbjct: 154 gatccaggacaaggagggcatccccccagaccagcagcggctcatcttcgctggcaaaca 213 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || || || || |||||||||||||||||||| |||||| |||||| ||||| Sbjct: 214 gcttgaggacgggcgcacgcttgctgactacaacatccagaaggagagcaccctccacct 273 Query: 192 ggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | |||||| || ||||||||||||||||| |||||| | |||||||| || Sbjct: 274 tgtgctccgcctcaggggaggcatgcagatctttgtgaaaaccctgaccggcaagactat 333 Query: 252 nacattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacan 311 || | |||||||| | | |||||||| ||| ||| ||||| ||||||||||||| Sbjct: 334 caccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatccaggacaa 393 Query: 312 ggganggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| || ||||| | |||||||||| | |||||||| ||||| Sbjct: 394 -ggagggcatccctccagaccagcagc-ggctcatctttgctgg 435 Score = 182 bits (92), Expect = 5e-43 Identities = 241/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 323 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaag 382 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||||||||| ||||| Sbjct: 383 atccaggacaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 442 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || || ||||| |||||||||||||| |||||| |||||| ||| || Sbjct: 443 cttgaggacgggcgcacgcttgccgactacaacatccagaaggagagcaccctccacttg 502 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| |||||| | ||||| || || Sbjct: 503 gtgctgcgcctcaggggaggcatgcagatcttcgtgaagaccctgaccggcaaaactatc 562 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 563 accctcgaggtggagtcttcagacaccatcgacaacgtcaaggccaagatccaggaca 620 Score = 52.0 bits (26), Expect = 0.001 Identities = 125/158 (79%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnac-attggaggtggantncct 272 ||||||||||||||||| |||||| | |||||||| || || | |||||||| | Sbjct: 67 atgcagatctttgtgaaaaccctgaccggcaagactatcactcctcgaggtggagtcgtc 126 Query: 273 ggacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacc 332 |||||||| ||| ||| ||||| ||||||||||||| ||| || |||| | |||| Sbjct: 127 tgacaccattgacaacgttaaggccaagatccaggacaa-ggagggcatccccccagacc 185 Query: 333 agcagcagcctcatcttcgctggcaancattttgagga 370 |||||| | ||||||||||||||||| || ||||||| Sbjct: 186 agcagc-ggctcatcttcgctggcaaacagcttgagga 222
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 40664 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 40722 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || |||||||||||||||| |||||||| Sbjct: 40723 gtgaaggccaagatccaggacaaggaagggatccccccggaccagcagcgcctcatcttc 40782 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| ||||||||| Sbjct: 40783 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcc 40842 Query: 181 accctncacctggagctccg 200 ||||| ||||| | |||||| Sbjct: 40843 accctccacctcgtgctccg 40862 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 40648 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 40707 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 40708 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggaagggatccccccggacca 40766 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 40767 gcagc-gcctcatcttcgccggcaa 40790
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 42315 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 42373 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || |||||||||||||||| |||||||| Sbjct: 42374 gtgaaggccaagatccaggacaaggaagggatccccccggaccagcagcgcctcatcttc 42433 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| ||||||||| Sbjct: 42434 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcc 42493 Query: 181 accctncacctggagctccg 200 ||||| ||||| | |||||| Sbjct: 42494 accctccacctcgtgctccg 42513 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 42299 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 42358 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 42359 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggaagggatccccccggacca 42417 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 42418 gcagc-gcctcatcttcgccggcaa 42441
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 3475033 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 3475091 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || |||||||||||||||| |||||||| Sbjct: 3475092 gtgaaggccaagatccaggacaaggaagggatccccccggaccagcagcgcctcatcttc 3475151 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| ||||||||| Sbjct: 3475152 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcc 3475211 Query: 181 accctncacctggagctccg 200 ||||| ||||| | |||||| Sbjct: 3475212 accctccacctcgtgctccg 3475231 Score = 123 bits (62), Expect = 4e-25 Identities = 146/176 (82%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| || |||||||| ||||| ||||| || ||| |||| || ||||||||||| Sbjct: 8545021 aagaccattacgcttgaggtcgagtcttctgatacaatcaacaatgagaaggcgaagatt 8544962 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 | |||||||||||||| |||||||||||||||| |||||||| || |||||||| || Sbjct: 8544961 taggacaaggagggcatccccccggaccagcagcgcctcatcttcgccggcaagcagctc 8544902 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 | || || || || || ||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 8544901 aaggacggacgcaccctggctgactacaatatccagaaggagtctacccttcacct 8544846 Score = 123 bits (62), Expect = 4e-25 Identities = 155/188 (82%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| ||||| ||| | ||||| ||||| || ||||| || ||||||| || || ||| Sbjct: 8544796 ggcaaaaccattaccttggaggttgagtcgtcggacacaattgacaacgtgaaagcaaag 8544737 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || ||||||||||||||| ||||||| |||||||| || ||||||||||||||||| Sbjct: 8544736 attcaggacaaggagggcattcccccggatcagcagcgactgatctttgctggcaagcag 8544677 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || | || | ||||||||||| |||||||||||| | |||||| Sbjct: 8544676 ctcgaggatggccgcaccttagcaggttacaacatccagaaggagtccaccttgcacctg 8544617 Query: 193 gagctccg 200 | |||||| Sbjct: 8544616 gcgctccg 8544609 Score = 115 bits (58), Expect = 1e-22 Identities = 133/160 (83%) Strand = Plus / Minus Query: 32 aggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggca 91 |||| |||||||||||||| || ||||| | |||||| ||||| || ||||||||||| | Sbjct: 8545464 aggttgagtcctctgacacgattgacaatgtcaaggccaagattcaggacaaggagggta 8545405 Query: 92 ttnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtacac 151 || | || ||||||||||| ||||||||||| |||||||| ||||| || || || || | Sbjct: 8545404 ttccacctgaccagcagcgcctcatctttgcgggcaagcaacttgaggacggacgcaccc 8545345 Query: 152 ttgctgactacaacatccanaaggagtccaccctncacct 191 | || || |||||||| || || ||||||||||| ||||| Sbjct: 8545344 tcgcagattacaacattcagaaagagtccaccctccacct 8545305 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 3475017 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 3475076 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 3475077 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggaagggatccccccggacca 3475135 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 3475136 gcagc-gcctcatcttcgccggcaa 3475159 Score = 73.8 bits (37), Expect = 4e-10 Identities = 132/163 (80%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 31 gaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggc 90 ||||| |||||||| ||||| || ||||||| ||||| |||||||| || |||||| | Sbjct: 8545236 gaggttgagtcctcagacacgattgacaacgtgaaggcaaagatccaggataaggagtgt 8545177 Query: 91 attnccccg-gaccagcagcgtctc-atctttgctggcaagcancttgangatggccgta 148 || |||| |||||||||||||| ||||||||||||||||| ||||| ||||| || | Sbjct: 8545176 atccccccctgaccagcagcgtctttatctttgctggcaagcagcttgaggatggtcgga 8545117 Query: 149 cacttgctgactacaacatccanaaggagtccaccctncacct 191 | | || ||||||||||| | || |||||||| || ||||| Sbjct: 8545116 ccttggcggactacaacatttagaaagagtccactcttcacct 8545074 Score = 63.9 bits (32), Expect = 3e-07 Identities = 85/104 (81%) Strand = Plus / Minus Query: 97 ccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgct 156 ||||| |||||||| |||||||| || || ||||| || || || ||| | || || || Sbjct: 22310863 ccggatcagcagcggctcatcttcgcggggaagcagctggaagacggctgcacgctggcc 22310804 Query: 157 gactacaacatccanaaggagtccaccctncacctggagctccg 200 |||||||||||||| |||||||| || || ||||||| |||||| Sbjct: 22310803 gactacaacatccagaaggagtcgacgcttcacctggtgctccg 22310760 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| ||||||||||||| ||||| Sbjct: 8544939 cggaccagcagc-gcctcatcttcgccggcaa 8544909
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 188 bits (95), Expect = 9e-45 Identities = 250/308 (81%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 568 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 626 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 627 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 686 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| |||||||| Sbjct: 687 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcg 746 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 747 accctgcacctggttctccgtctgaggggtggtatgcagatctttgtgaagaccctgacc 806 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 807 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 866 Query: 301 atccagga 308 |||||||| Sbjct: 867 atccagga 874 Score = 180 bits (91), Expect = 2e-42 Identities = 249/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 340 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 398 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 399 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 458 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| |||||||| Sbjct: 459 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcg 518 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 519 accctgcacctggttctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 578 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 579 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 638 Query: 301 atccagga 308 |||||||| Sbjct: 639 atccagga 646 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| || | ||||| ||| Sbjct: 123 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaaggccaag 182 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 183 atccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcag 242 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||| ||||||||||| |||||||| ||||| |||||| Sbjct: 243 ctggaagatggccgcactctttctgattacaacatccagaaggagtcgaccctgcacctg 302 Query: 193 g 193 | Sbjct: 303 g 303 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 796 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 854 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 855 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 914 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| |||||||| || || ||||| Sbjct: 915 gccggcaagcagctggaagatggccgcactctttctgattacaacattcagaaagagtcg 974 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 975 accctgcacctgg 987 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 383 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 384 gacaccatcgagaacgtgaaggccaagatccagga 418 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 96 atgcaaatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtgga 148
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 188 bits (95), Expect = 9e-45 Identities = 250/308 (81%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 568 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 626 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 627 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 686 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| |||||||| Sbjct: 687 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcg 746 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 747 accctgcacctggttctccgtctgaggggtggtatgcagatctttgtgaagaccctgacc 806 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 807 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 866 Query: 301 atccagga 308 |||||||| Sbjct: 867 atccagga 874 Score = 180 bits (91), Expect = 2e-42 Identities = 249/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 340 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 398 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 399 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 458 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| |||||||| Sbjct: 459 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcg 518 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 519 accctgcacctggttctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 578 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 579 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 638 Query: 301 atccagga 308 |||||||| Sbjct: 639 atccagga 646 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| || | ||||| ||| Sbjct: 123 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaaggccaag 182 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 183 atccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcag 242 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||| ||||||||||| |||||||| ||||| |||||| Sbjct: 243 ctggaagatggccgcactctttctgattacaacatccagaaggagtcgaccctgcacctg 302 Query: 193 g 193 | Sbjct: 303 g 303 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 796 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 854 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 855 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 914 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| |||||||| || || ||||| Sbjct: 915 gccggcaagcagctggaagatggccgcactctttctgattacaacattcagaaagagtcg 974 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 975 accctgcacctgg 987 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 383 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 384 gacaccatcgagaacgtgaaggccaagatccagga 418 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||| ||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 96 atgcaaatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtgga 148
>dbj|AK119731.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-158-A01, full insert sequence Length = 735 Score = 188 bits (95), Expect = 9e-45 Identities = 173/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 87 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 145 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || |||||||||||||||| |||||||| Sbjct: 146 gtgaaggccaagatccaggacaaggaagggatccccccggaccagcagcgcctcatcttc 205 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| ||||||||| Sbjct: 206 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcc 265 Query: 181 accctncacctggagctccg 200 ||||| ||||| | |||||| Sbjct: 266 accctccacctcgtgctccg 285 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 71 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 130 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 131 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggaagggatccccccggacca 189 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 190 gcagc-gcctcatcttcgccggcaa 213
>gb|AF517839.1| Triticum aestivum ubiquitin protein mRNA, partial cds Length = 204 Score = 186 bits (94), Expect = 3e-44 Identities = 152/173 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| |||||||| |||||||| ||||| | ||||| ||| Sbjct: 28 ggcaagaccatcaccctggaggttgagtcctcagacaccattgacaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||||||||||||||| || |||||||| |||||||| Sbjct: 88 atccaggacaaggagggcatccccccggaccagcagcgcctgatctttgccggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 || || |||||||| || || ||||||||||||||||| |||||||||||||| Sbjct: 148 ctcgaggatggccgcaccctggctgactacaacatccagaaggagtccaccct 200 Score = 40.1 bits (20), Expect = 5.0 Identities = 76/97 (78%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||| ||||| || ||||| | ||||||||||| || ||||||| || | | Sbjct: 1 atgcagatttttgtaaagaccctcaccggcaagaccatcaccctggaggttgagtcctca 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 |||||||| ||| || ||||| ||||||||||||| Sbjct: 61 gacaccattgacaatgtgaaggccaagatccaggaca 97
>dbj|D16248.1|SOYUBI Glycine max Subi-1 gene for ubiquitin, complete cds Length = 4955 Score = 186 bits (94), Expect = 3e-44 Identities = 154/176 (87%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| Sbjct: 3118 aagaccatcacccttgaggtggaaagctctgacaccatcgacaacgtcaaggccaagatc 3177 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| ||||||||||||| |||||||||||||| || ||||| || Sbjct: 3178 caggacaaggaaggaattcccccggaccagcaacgtctcatctttgccggaaagcagctc 3237 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || || |||||||||||||| |||||||| ||||| ||||| Sbjct: 3238 gaggacggccgtaccctcgccgactacaacatccagaaggagtcaacccttcacct 3293 Score = 127 bits (64), Expect = 3e-26 Identities = 140/167 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| || ||||| || || ||| ||| |||||||||||||||| |||||| ||| Sbjct: 3571 ggcaagactataaccctagaagtcgagagctccgacaccatcgacaacgtcaaggctaag 3630 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||| ||||||||| | || ||||| || |||||||| Sbjct: 3631 atccaggacaaggagggtatccccccagaccagcagaggctgatcttcgccggcaagcag 3690 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtc 179 || || || || ||||| |||||||||||||||||||| |||||||| Sbjct: 3691 ctcgaggacggacgtacccttgctgactacaacatccagaaggagtc 3737 Score = 121 bits (61), Expect = 2e-24 Identities = 148/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| ||||| ||||| ||||| || |||||||||||| ||||||| |||||| ||| Sbjct: 3343 ggcaaaaccataaccctagaggtcgaaagctctgacaccattgacaacgtcaaggccaag 3402 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||| |||||||| ||||||||||| || || ||||| Sbjct: 3403 atccaggacaaggagggaatccccccagaccagcaacgtctcatcttcgccggaaagcaa 3462 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || || || || || || |||||||||||||| ||||| || ||||| ||||| Sbjct: 3463 cttgaggacgggcgcaccctcgccgactacaacatccagaaggaatcaacccttcacct 3521 Score = 97.6 bits (49), Expect = 2e-17 Identities = 134/164 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| || ||||| ||||||||| ||| |||||||| ||||| | |||||||||||| Sbjct: 3802 aagactattaccctcgaggtggagagctccgacaccattgacaatgtgaaggcgaagatc 3861 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || || | |||||||||||| | || || ||||||||||| || || Sbjct: 3862 caggacaaggaaggaatcccaccggaccagcagaggcttatttttgctggcaaacagcta 3921 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| | || || ||||||||||||||||| |||||||| Sbjct: 3922 gaggatggaaggaccctcgctgactacaacatccagaaggagtc 3965 Score = 46.1 bits (23), Expect = 0.081 Identities = 33/37 (89%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3604 gacaccatcgacaacgtcaaggctaagatccaggaca 3640 Score = 46.1 bits (23), Expect = 0.081 Identities = 33/37 (89%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 3148 gacaccatcgacaacgtcaaggccaagatccaggaca 3184
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 184 bits (93), Expect = 1e-43 Identities = 239/295 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| Sbjct: 386 aagaccatcacccttgaggtggagagctctgacaccatcgacaacgtcaaggccaagatc 445 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||||||||||||| | | ||||| ||||| ||||| || Sbjct: 446 caggacaaggagggaattcccccggaccagcagaggttgatcttcgctggaaagcagctg 505 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| || || || || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 506 gaggatgggcgcaccctcgccgactacaacatccagaaggaatcaacccttcacctggtt 565 Query: 196 ctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnaca 255 ||||| || | ||||||||||||||||| || || | ||||||||||| || Sbjct: 566 ctccgtctccgtggtggcatgcagatctttgtgaagactcttaccggcaagaccatcacc 625 Query: 256 ttggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 | |||||||| | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 626 ctcgaggtggagagctctgacaccatcgacaacgtgaaggccaagatccaggaca 680 Score = 119 bits (60), Expect = 7e-24 Identities = 179/224 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||| Sbjct: 611 ggcaagaccatcaccctcgaggtggagagctctgacaccatcgacaacgtgaaggccaag 670 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||||||||||||| | | ||||| ||||| || || Sbjct: 671 atccaggacaaggagggaatacccccggaccagcagaggttgatcttcgctggaaaacag 730 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| | || || || ||||| |||||||| |||||||| || || ||| || Sbjct: 731 ctggaggatggaaggaccctcgccgactataacatccagaaggagtcaactctccacttg 790 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccct 236 | | | || |||| ||||||||||||||||| ||||| Sbjct: 791 gtgttgcgtcttcgtgggggtatgcagatctttgtgaagaccct 834 Score = 115 bits (58), Expect = 1e-22 Identities = 145/176 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| ||||||||||||||| |||||||||||||||||| | |||||||| || Sbjct: 1070 aagaccattacccttgaggtggagagctctgacaccatcgacaatgtgaaggcgaaaatt 1129 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| | |||||||||||| | | |||||||| || ||||| | Sbjct: 1130 caggacaaggagggcatcccaccggaccagcagaggttgatctttgcagggaagcagttg 1189 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || ||||| | || |||||||| |||||||| || ||||||||||| || ||||| Sbjct: 1190 gaggatggaagaacccttgctgattacaacattcagaaggagtccactcttcacct 1245 Score = 60.0 bits (30), Expect = 5e-06 Identities = 102/128 (79%) Strand = Plus / Plus Query: 64 aaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgct 123 ||||| |||||||| || |||||||| ||| ||||||| |||||| | | || || ||| Sbjct: 890 aaggccaagatccaggataaggagggtattcccccggatcagcagaggttgatattcgct 949 Query: 124 ggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtccacc 183 || ||||| ||||| || || | || ||||||||||| ||||| || ||||| || ||| Sbjct: 950 gggaagcagcttgaggacgggaggacccttgctgactataacattcagaaggaatctacc 1009 Query: 184 ctncacct 191 || ||||| Sbjct: 1010 cttcacct 1017
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 184 bits (93), Expect = 1e-43 Identities = 156/179 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||| ||||| ||||| || || ||||||| ||||| ||| Sbjct: 16700 ggcaagactatcacccttgaggttgagtcttctgatactattgacaacgttaaggcaaag 16759 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || ||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 16760 atccaggacaaggaagggattcccccggaccagcagcgtctgatctttgctggcaagcag 16819 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || ||||| | || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 16820 ctcgaggatggtaggacccttgctgactacaacatccagaaggagtccacccttcacct 16878 Score = 184 bits (93), Expect = 1e-43 Identities = 156/179 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||||||||| |||||||| || ||||| ||||| | ||||| ||| Sbjct: 16472 ggcaagaccataacccttgaggttgagtcctcggataccattgacaatgtaaaggccaag 16531 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 16532 atccaggacaaggagggaatcccaccggaccagcagcgtctcatcttcgctggcaagcag 16591 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| || || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 16592 cttgaagatgggcgcacgcttgctgactacaacatccagaaggaatccaccctccacct 16650 Score = 176 bits (89), Expect = 3e-41 Identities = 155/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| || |||||||| ||||| || ||||| |||||||||| ||||||||| Sbjct: 16928 ggcaagaccattacgcttgaggttgagtcatcagacacgatcgacaacgtgaaggcgaag 16987 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| || ||||||||||| || ||||| |||||||| Sbjct: 16988 atccaggacaaggagggcattcccccagatcagcagcgtcttatttttgccggcaagcag 17047 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||| | || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 17048 ctggaggatggcaggaccctcgctgactacaacatccagaaggagtccacccttcacct 17106 Score = 147 bits (74), Expect = 3e-32 Identities = 158/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| || ||||| ||||| ||| ||| |||||||| ||||||| ||||||||| Sbjct: 17156 ggcaagactattaccctggaggttgagagctcagacaccattgacaacgtgaaggcgaag 17215 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||||||||| |||||||||||||| | |||||||| ||||| ||||| Sbjct: 17216 atccaggataaggagggcatccccccggaccagcagagactcatcttcgctggtaagcag 17275 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| ||||||||||| || |||||||| ||||| ||| || Sbjct: 17276 ctggaggatggccgcacccttgccgactacaacattcagaaggagtctaccctacacttg 17335 Query: 193 gagctccg 200 | |||||| Sbjct: 17336 gtgctccg 17343 Score = 131 bits (66), Expect = 2e-27 Identities = 156/188 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| || || ||||| ||| ||| || ||||||||||| | ||||| ||| Sbjct: 17384 ggcaagaccattactctggaggttgagagctccgataccatcgacaatgtgaaggctaag 17443 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || ||| |||| ||||||||||| || ||||| || |||||||| Sbjct: 17444 atccaggacaaggaaggtattcccccagaccagcagcgcctgatcttcgccggcaagcag 17503 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| || || ||||||||||| || |||||||| ||||| |||||| Sbjct: 17504 ctggaagatggccgtaccctcgccgactacaacattcagaaggagtctaccctccacctg 17563 Query: 193 gagctccg 200 | |||||| Sbjct: 17564 gtgctccg 17571 Score = 56.0 bits (28), Expect = 8e-05 Identities = 115/145 (79%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| || || | ||||||||||| || | ||||| || | | | Sbjct: 16445 atgcagatctttgtgaagactctcactggcaagaccataacccttgaggttgagtcctcg 16504 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 || ||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 16505 gataccattgacaatgtaaaggccaagatccaggacaa-ggagggaatcccaccggacca 16563 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||||||||| Sbjct: 16564 gcagc-gtctcatcttcgctggcaa 16587 Score = 48.1 bits (24), Expect = 0.020 Identities = 68/82 (82%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||||||||||||||| | ||| || |||| ||||||| Sbjct: 17189 gacaccattgacaacgtgaaggcgaagatccaggataa-ggagggcatccccccggacca 17247 Query: 334 gcagcagcctcatcttcgctgg 355 |||| || |||||||||||||| Sbjct: 17248 gcag-agactcatcttcgctgg 17268
>dbj|AB210852.1| Lemna gibba LgUBQ mRNA for ubiquitin, partial cds Length = 216 Score = 182 bits (92), Expect = 5e-43 Identities = 167/193 (86%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 15 agaccctgaccgg-caagaccatcacacttgaggtggagtcttcggacaccatcgacaac 73 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || |||||||| ||| ||||||||||||||||||||||||| Sbjct: 74 gtcaaggccaagatccaggataaggagggaattcccccggaccagcagcgtctcatcttc 133 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||| || || ||||| ||| Sbjct: 134 gccggcaagcagctggaggatggccgcaccctcgccgactacaatattcagaaggaatcc 193 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 194 actctccacctgg 206 Score = 71.9 bits (36), Expect = 1e-09 Identities = 77/93 (82%) Strand = Plus / Plus Query: 216 gcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctgga 275 ||||||||| ||||| |||||| | ||||||||||| ||| | |||||||| | ||| Sbjct: 1 gcagatcttcgtgaagaccctgaccggcaagaccatcacacttgaggtggagtcttcgga 60 Query: 276 caccatccacancgtnaaggcgaagatccagga 308 ||||||| ||| ||| ||||| ||||||||||| Sbjct: 61 caccatcgacaacgtcaaggccaagatccagga 93
>emb|X92422.1|ZMUBIS27F Z.mays mRNA for ubiquitin/ribosomal protein S27a fusion protein Length = 777 Score = 182 bits (92), Expect = 5e-43 Identities = 167/193 (86%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 107 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 165 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 166 gtgaaggccaagatccaggacaaggagggcatcccgccggaccagcagcgcctcatcttc 225 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || || |||||||||||||| |||||||| Sbjct: 226 gccggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcg 285 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 286 acgctgcacctgg 298 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 91 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 150 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 151 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggagggcatcccgccggacca 209 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 210 gcagc-gcctcatcttcgccggcaa 233
>gb|U74318.1|SCU74318 Schizophyllum commune polyubiquitin mRNA, complete cds Length = 1079 Score = 182 bits (92), Expect = 5e-43 Identities = 241/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| |||||||| |||||||||||||| | |||||| ||| Sbjct: 68 ggcaagaccatcactctcgaggttgagtcctcggacaccatcgacaatgtcaaggccaag 127 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | || ||||||||||| || ||||| || |||||||| Sbjct: 128 atccaggacaaggagggcattcctcccgaccagcagcgcctgatcttcgccggcaagcag 187 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| | |||||||||||||| |||||||| || || ||||| Sbjct: 188 ctcgaggatggccgcaccctttcggactacaacatccagaaggagtctactctccacctc 247 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || | ||||||||||| || || ||||| |||||||||| || Sbjct: 248 gtgctccgtctccgtggcggcatgcagatcttcgtcaagaccctcacgggcaagactatc 307 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | ||||| || | |||||||||| ||| ||| ||||||||||||||||||| Sbjct: 308 acccttgaggtcgagtcgtcggacaccatcgacaacgtcaaggcgaagatccaggaca 365 Score = 155 bits (78), Expect = 1e-34 Identities = 153/180 (85%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 ||||||||| ||||| || ||||| || ||||||||||| |||||||||| ||||||||| Sbjct: 751 gggcaagacgatcacgctcgaggtcgaatcctctgacacgatcgacaacgtcaaggcgaa 810 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 ||| || ||||||||||||||| ||||||| |||||||| |||||||| || |||||||| Sbjct: 811 gattcaggacaaggagggcattcccccggatcagcagcgcctcatcttcgccggcaagca 870 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || || || || || ||||||||||||| || |||||||| ||||| ||||| Sbjct: 871 gctggaggacggtcgcaccctgtctgactacaacattcagaaggagtcgaccctccacct 930 Score = 153 bits (77), Expect = 5e-34 Identities = 113/126 (89%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 ||||||||| |||||||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 295 gggcaagactatcacccttgaggtcgagtcgtcggacaccatcgacaacgtcaaggcgaa 354 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| ||||||||||||||| | || |||||||||||||| |||||||| || ||||| Sbjct: 355 gatccaggacaaggagggcattccgcccgaccagcagcgtcttatctttgccgggaagca 414 Query: 132 ncttga 137 ||||| Sbjct: 415 acttga 420 Score = 123 bits (62), Expect = 4e-25 Identities = 146/176 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| ||||| ||||| ||||| || ||||| |||||||||| ||||| |||||| Sbjct: 527 aagaccattaccctcgaggtcgagtcgtcggacacaatcgacaacgtgaaggccaagatc 586 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| | || || ||||||||||| ||||| ||||||||||| || Sbjct: 587 caggacaaggagggcatccctcccgatcagcagcgtcttatcttcgctggcaagcagctc 646 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || |||||||| || || | || ||||||||||| |||||||| || || ||||| Sbjct: 647 gaggatggccgcactctctcggattacaacatccagaaggagtcgactctccacct 702 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||||||||| || ||||| | ||||||||||| || | ||||| || | | | Sbjct: 41 atgcagatctttgtcaagacccttactggcaagaccatcactctcgaggttgagtcctcg 100 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||| ||||||||||||| Sbjct: 101 gacaccatcgacaatgtcaaggccaagatccaggaca 137 Score = 40.1 bits (20), Expect = 5.0 Identities = 70/86 (81%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 273 ggacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacc 332 |||||| ||| ||| ||| ||||| ||||||||||||| || | || ||||| | || | Sbjct: 556 ggacacaatcgacaacgtgaaggccaagatccaggacaagg-agggcatccctcccgatc 614 Query: 333 agcagcagcctcatcttcgctggcaa 358 |||||| | || |||||||||||||| Sbjct: 615 agcagc-gtcttatcttcgctggcaa 639
>ref|NM_018955.2| Homo sapiens ubiquitin B (UBB), mRNA Length = 971 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 166 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 225 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 226 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 285 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 286 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 345 Query: 193 g 193 | Sbjct: 346 g 346 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 611 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 669 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 670 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 729 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 730 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 789 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 790 accctgcacctgg 802 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 383 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 441 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 442 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 501 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 502 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 561 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 562 accctgcacctgg 574 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 595 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 647 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 367 atgcagatcttcgtgaagaccctgaccggcaagaccat 404 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 139 atgcagatcttcgtgaaaacccttaccggcaagaccat 176
>gb|BC038999.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:47606 IMAGE:4943285), complete cds Length = 957 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 135 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 194 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 195 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 254 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 255 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 314 Query: 193 g 193 | Sbjct: 315 g 315 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 580 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 638 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 639 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 698 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 699 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 758 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 759 accctgcacctgg 771 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 352 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 410 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 411 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 470 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 471 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 530 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 531 accctgcacctgg 543 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 564 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 616 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 336 atgcagatcttcgtgaagaccctgaccggcaagaccat 373 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 108 atgcagatcttcgtgaaaacccttaccggcaagaccat 145
>gb|BT020104.1| Homo sapiens ubiquitin B mRNA, complete cds Length = 690 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 148 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>gb|BT017660.1| Zea mays clone EL01N0440E11.c mRNA sequence Length = 997 Score = 180 bits (91), Expect = 2e-42 Identities = 154/177 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| ||| Sbjct: 331 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaag 390 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| |||||||||||||| ||||| Sbjct: 391 atccaggacaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 450 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 ||||| || || || || ||||| |||||||||||||| |||||| |||||| ||| Sbjct: 451 cttgaggacgggcgcacgcttgccgactacaacatccagaaggagagcaccctccac 507 Score = 170 bits (86), Expect = 2e-39 Identities = 276/344 (80%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||||| ||||| ||| Sbjct: 102 ggcaagactatcaccctcgaggtggagtcgtctgacaccattgacaacgttaaggccaag 161 Query: 73 atccangacaagg-agggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 ||||| ||| || ||||||| |||| ||||||||||| |||||||| |||||||| || Sbjct: 162 atccaggacgggggagggcatccccccagaccagcagcggctcatcttcgctggcaaaca 221 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || || || || |||||||||||||||||||| |||||| |||||| ||||| Sbjct: 222 gcttgaggacgggcgcacgcttgctgactacaacatccagaaggagagcaccctccacct 281 Query: 192 ggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | |||||| || ||||||||||||||||| |||||| | |||||||| || Sbjct: 282 tgtgctccgcctcaggggaggcatgcagatctttgtgaaaaccctgaccggcaagactat 341 Query: 252 nacattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacan 311 || | |||||||| | | |||||||| ||| ||| ||||| ||||||||||||| Sbjct: 342 caccctcgaggtggagtcctctgacaccattgacaacgtcaaggccaagatccaggacaa 401 Query: 312 ggganggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| || ||||| | |||||||||| | |||||||| ||||| Sbjct: 402 -ggagggcatccctccagaccagcagc-ggctcatctttgctgg 443 Score = 141 bits (71), Expect = 2e-30 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| || |||||||| |||| |||||| || ||||||||||||||| Sbjct: 548 agaccctgaccgg-caaaactatcaccctcgagggggagtcttcagacaccatcgacaac 606 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 607 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcgtctgatcttc 666 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggag 177 || ||||| || || || |||||||| | | || |||||||||||||| |||||| Sbjct: 667 gccggcaaacagctggaggatggccgccccttagcagactacaacatccaaaaggag 723 Score = 73.8 bits (37), Expect = 4e-10 Identities = 125/157 (79%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||||| || || | |||||||| | Sbjct: 75 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcgtct 134 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| |||||||||||| |||| || |||| | ||||| Sbjct: 135 gacaccattgacaacgttaaggccaagatccaggacgggggagggcatccccccagacca 194 Query: 334 gcagcagcctcatcttcgctggcaancattttgagga 370 ||||| | ||||||||||||||||| || ||||||| Sbjct: 195 gcagc-ggctcatcttcgctggcaaacagcttgagga 230 Score = 46.1 bits (23), Expect = 0.081 Identities = 33/37 (89%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 592 gacaccatcgacaacgtcaaggccaagatccaggaca 628
>gb|BC046123.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:57581 IMAGE:3879581), complete cds Length = 951 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 114 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 173 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 174 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 233 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 234 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 293 Query: 193 g 193 | Sbjct: 294 g 294 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 559 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 617 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 618 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 677 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 678 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 737 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 738 accctgcacctgg 750 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 331 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 389 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 390 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 449 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 450 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 509 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 510 accctgcacctgg 522 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 595 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 315 atgcagatcttcgtgaagaccctgaccggcaagaccat 352 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 87 atgcagatcttcgtgaaaacccttaccggcaagaccat 124
>gb|BC031027.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:32826 IMAGE:4715377), complete cds Length = 919 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 126 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 185 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 186 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 245 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 246 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 305 Query: 193 g 193 | Sbjct: 306 g 306 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 571 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 629 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 630 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 689 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 690 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 749 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 750 accctgcacctgg 762 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 343 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 401 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 402 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 461 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 462 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 521 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 522 accctgcacctgg 534 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 555 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 607 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 327 atgcagatcttcgtgaagaccctgaccggcaagaccat 364 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 99 atgcagatcttcgtgaaaacccttaccggcaagaccat 136
>gb|BC026301.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24729 IMAGE:4280629), complete cds Length = 957 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 124 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 183 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 184 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 243 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 244 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 303 Query: 193 g 193 | Sbjct: 304 g 304 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 569 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 627 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 628 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 687 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 688 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 747 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 748 accctgcacctgg 760 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 341 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 399 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 400 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 459 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 460 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 519 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 520 accctgcacctgg 532 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 553 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 605 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 325 atgcagatcttcgtgaagaccctgaccggcaagaccat 362 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 97 atgcagatcttcgtgaaaacccttaccggcaagaccat 134
>gb|BC021067.1| Homo sapiens cDNA clone IMAGE:3510175, **** WARNING: chimeric clone **** Length = 4562 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 3739 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 3798 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 3799 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 3858 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 3859 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 3918 Query: 193 g 193 | Sbjct: 3919 g 3919 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 4184 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 4242 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 4243 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 4302 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 4303 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 4362 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 4363 accctgcacctgg 4375 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 3956 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 4014 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 4015 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 4074 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 4075 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 4134 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 4135 accctgcacctgg 4147 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 4168 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 4220 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 3940 atgcagatcttcgtgaagaccctgaccggcaagaccat 3977 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 3712 atgcagatcttcgtgaaaacccttaccggcaagaccat 3749
>emb|CR620731.1| full-length cDNA clone CS0DF038YI22 of Fetal brain of Homo sapiens (human) Length = 940 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 140 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 199 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 200 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 259 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 260 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 319 Query: 193 g 193 | Sbjct: 320 g 320 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 585 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 643 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 644 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 703 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 704 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 763 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 764 accctgcacctgg 776 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 357 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 415 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 416 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 475 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 476 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 535 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 536 accctgcacctgg 548 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 569 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 621 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 341 atgcagatcttcgtgaagaccctgaccggcaagaccat 378 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 113 atgcagatcttcgtgaaaacccttaccggcaagaccat 150
>emb|CR607481.1| full-length cDNA clone CS0DN001YF11 of Adult brain of Homo sapiens (human) Length = 917 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 114 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 173 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 174 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 233 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 234 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 293 Query: 193 g 193 | Sbjct: 294 g 294 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 559 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 617 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 618 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 677 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 678 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 737 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 738 accctgcacctgg 750 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 331 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 389 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 390 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 449 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 450 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 509 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 510 accctgcacctgg 522 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 595 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 315 atgcagatcttcgtgaagaccctgaccggcaagaccat 352 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 87 atgcagatcttcgtgaaaacccttaccggcaagaccat 124
>emb|CR589965.1| full-length cDNA clone CS0DF011YA08 of Fetal brain of Homo sapiens (human) Length = 908 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 106 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 165 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 166 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 225 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 226 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 285 Query: 193 g 193 | Sbjct: 286 g 286 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 551 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 609 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 610 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 669 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 670 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 729 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 730 accctgcacctgg 742 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 323 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 381 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 382 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 441 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 442 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 501 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 502 accctgcacctgg 514 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 535 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 587 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 307 atgcagatcttcgtgaagaccctgaccggcaagaccat 344 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 79 atgcagatcttcgtgaaaacccttaccggcaagaccat 116
>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence Length = 170944 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 102724 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 102783 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 102784 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 102843 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 102844 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 102903 Query: 193 g 193 | Sbjct: 102904 g 102904 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 103169 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 103227 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 103228 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 103287 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 103288 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 103347 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 103348 accctgcacctgg 103360 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 102941 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 102999 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 103000 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 103059 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 103060 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 103119 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 103120 accctgcacctgg 103132 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 103153 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 103205 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 102925 atgcagatcttcgtgaagaccctgaccggcaagaccat 102962 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 102697 atgcagatcttcgtgaaaacccttaccggcaagaccat 102734
>gb|AY888190.1| Synthetic construct Homo sapiens clone FLH021788.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 148 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>dbj|AB089617.1| Homo sapiens UbB gene for polyubiquitin B, complete cds Length = 690 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 148 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>dbj|AK129498.1| Homo sapiens cDNA FLJ25987 fis, clone CBR05488, highly similar to Homo sapiens ubiquitin B (UBB) Length = 928 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 124 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 183 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 184 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 243 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 244 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 303 Query: 193 g 193 | Sbjct: 304 g 304 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 341 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 399 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 400 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 459 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 460 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 519 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 520 accctgcacctgg 532 Score = 127 bits (64), Expect = 3e-26 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 569 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 627 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| | |||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 628 gtgaaggccatgatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 687 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 688 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 747 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 748 accctgcacctgg 760 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 553 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 605 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 325 atgcagatcttcgtgaagaccctgaccggcaagaccat 362 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 97 atgcagatcttcgtgaaaacccttaccggcaagaccat 134
>gb|BC015127.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24232 IMAGE:3929901), complete cds Length = 965 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 128 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 187 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 188 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 247 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 248 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 307 Query: 193 g 193 | Sbjct: 308 g 308 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 573 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 631 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 632 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 691 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 692 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 751 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 752 accctgcacctgg 764 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 345 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 403 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 404 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 463 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 464 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 523 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 524 accctgcacctgg 536 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 557 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 609 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccat 366 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 101 atgcagatcttcgtgaaaacccttaccggcaagaccat 138
>gb|BC009301.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:16688 IMAGE:4126622), complete cds Length = 943 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 112 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 171 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 172 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 231 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 232 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 291 Query: 193 g 193 | Sbjct: 292 g 292 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 557 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 615 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 616 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 675 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 676 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 735 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 736 accctgcacctgg 748 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 329 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 387 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 388 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 447 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 448 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 507 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 508 accctgcacctgg 520 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 541 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 593 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 313 atgcagatcttcgtgaagaccctgaccggcaagaccat 350 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 85 atgcagatcttcgtgaaaacccttaccggcaagaccat 122
>gb|AY103568.1| Zea mays PCO110021 mRNA sequence Length = 865 Score = 180 bits (91), Expect = 2e-42 Identities = 172/200 (86%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 162 agaccctgacgggg-aagaccatcacgctggaggtggagtcctcggacaccatcgacaac 220 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 221 gtgaaggccaagatccaggacaaggagggcatcccgccggaccagcagcgcctcatcttc 280 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || ||||| || || || |||||||| || || || |||||||||||||| |||||||| Sbjct: 281 gccggcaaacagctcgaggatggccgcaccctcgccgactacaacatccagaaggagtcg 340 Query: 181 accctncacctggagctccg 200 || || ||||||| |||||| Sbjct: 341 acgctgcacctggtgctccg 360 Score = 103 bits (52), Expect = 4e-19 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | | | Sbjct: 146 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 205 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| ||| ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 206 gacaccatcgacaacgtgaaggccaagatccaggacaa-ggagggcatcccgccggacca 264 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 265 gcagc-gcctcatcttcgccggcaa 288
>emb|AL356460.3|HS84M10 Homo sapiens chromosome 17 from PAC 84M10 map17p11.2 region D17S842-D17S953, complete sequence Length = 161943 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 7562 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 7503 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 7502 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 7443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 7442 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 7383 Query: 193 g 193 | Sbjct: 7382 g 7382 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 7345 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 7287 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 7286 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 7227 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 7226 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 7167 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 7166 accctgcacctgg 7154 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 7117 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 7059 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 7058 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 6999 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 6998 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 6939 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 6938 accctgcacctgg 6926 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 7133 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 7081 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 7361 atgcagatcttcgtgaagaccctgaccggcaagaccat 7324 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 7589 atgcagatcttcgtgaaaacccttaccggcaagaccat 7552
>emb|X04803.2|HSYUBG1 Homo sapiens ubiquitin gene Length = 3107 Score = 180 bits (91), Expect = 2e-42 Identities = 157/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 2110 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 2169 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 2170 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 2229 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 2230 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 2289 Query: 193 g 193 | Sbjct: 2290 g 2290 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 2327 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 2385 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 2386 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 2445 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 2446 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 2505 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2506 accctgcacctgg 2518 Score = 127 bits (64), Expect = 3e-26 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || || |||||| || |||||||||||| || Sbjct: 2555 agaccctgaccgg-caagaccatcactctggaagtggagcccagtgacaccatcgaaaat 2613 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 2614 gtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagaggctcatcttt 2673 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 2674 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 2733 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2734 accctgcacctgg 2746 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 2539 atgcagatcttcgtgaagaccctgaccggcaagaccat 2576 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 2311 atgcagatcttcgtgaagaccctgaccggcaagaccat 2348 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 2083 atgcagatcttcgtgaaaacccttaccggcaagaccat 2120
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 178 bits (90), Expect = 8e-42 Identities = 151/173 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||| | |||||| ||| Sbjct: 67 ggcaagactatcaccctcgaggtggagtcttctgacaccattgacaatgtcaaggctaag 126 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| || ||||| || |||||||| Sbjct: 127 atccaggacaaggagggcatccctcctgaccagcagcggcttatcttcgccggcaagcag 186 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 ||||| || ||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 187 cttgaggacggccgcacacttgctgactacaacatccagaaggagtcaaccct 239 Score = 167 bits (84), Expect = 3e-38 Identities = 239/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || |||||||| || || | |||||| ||| Sbjct: 295 ggcaagacaatcacccttgaggtggagtcttcagacaccattgataatgtcaaggctaag 354 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| || ||||| || |||||||| Sbjct: 355 atccaggacaaggagggcatccctcctgaccagcagcggcttatcttcgccggcaagcag 414 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || ||||||||||||||||||||||| |||||||| ||||| ||| || Sbjct: 415 cttgaggacggacgcacacttgctgactacaacatccagaaggagtcaaccctccacttg 474 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || ||| |||||||||||||| || ||| || | |||||||| || Sbjct: 475 gtgctgcgccttaggggaggcatgcagatctttgtcaagaccttgactggcaagacaatc 534 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | | |||||||| ||| || ||||| ||||||||||||| Sbjct: 535 acccttgaggtggagtcctcagacaccattgacaatgtcaaggcaaagatccaggaca 592 Score = 165 bits (83), Expect = 1e-37 Identities = 152/177 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||| ||||| | |||||| ||| Sbjct: 523 ggcaagacaatcacccttgaggtggagtcctcagacaccattgacaatgtcaaggcaaag 582 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || |||||||| |||||||||||||| |||||||| Sbjct: 583 atccaggacaaggagggcatcccacctgaccagcaacgtctcatctttgccggcaagcag 642 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 | || ||||| | || |||||||||||||||||||| |||||| |||||| ||| Sbjct: 643 ttggaggatgggaggacccttgctgactacaacatccagaaggagagcaccctccac 699 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagac 248 ||||||||||||||||| ||||| | |||||||| Sbjct: 40 atgcagatctttgtgaagaccctcaccggcaagac 74
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 178 bits (90), Expect = 8e-42 Identities = 260/324 (80%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||| | |||||| ||| Sbjct: 152 ggcaagactatcaccctcgaggtggagtcttctgacaccattgacaatgtcaaggctaag 211 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| || ||||| || |||||||| Sbjct: 212 atccaggacaaggagggcatccctcctgaccagcagcggcttatcttcgccggcaagcag 271 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || ||||||||||||||||||||||| |||||||| ||||| ||| || Sbjct: 272 cttgaggacggacgcacacttgctgactacaacatccagaaggagtcaaccctccacttg 331 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || ||| |||||||||||||| || ||| || | |||||||| || Sbjct: 332 gtgctgcgccttaggggaggcatgcagatctttgtcaagaccttgactggcaagacaatc 391 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | | |||||||| ||| || ||||| ||||||||||||| Sbjct: 392 acccttgaggtggagtcctcagacaccattgacaatgtcaaggcaaagatccaggacaa- 450 Query: 313 gganggtntccctncggaccagca 336 ||| || ||||| |||||||||| Sbjct: 451 ggagggcatccctccggaccagca 474 Score = 167 bits (84), Expect = 3e-38 Identities = 164/193 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| |||||||||||||||||||| ||||| ||| Sbjct: 1064 ggcaagaccataaccctggaggttgagagctctgacaccatcgacaacgtgaaggctaag 1123 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| |||| |||||||||||||| ||||| || |||||||| Sbjct: 1124 atccaggacaaggaggggattcccccagaccagcagcgtctgatcttcgccggcaagcag 1183 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || ||||| |||||||| ||||| |||||| |||||| |||||| Sbjct: 1184 ctggaggatggtcgcacccttgcagactacaatatccagaaggagagcaccctccacctg 1243 Query: 193 gagctccgncttc 205 | |||||| |||| Sbjct: 1244 gtgctccgtcttc 1256 Score = 159 bits (80), Expect = 8e-36 Identities = 275/346 (79%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| |||||||||||||| || || ||||| ||||| | |||||| ||| Sbjct: 608 ggcaagaccatcactcttgaggtggagtcttcagataccattgacaatgtcaaggccaag 667 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | ||||||||||||||||| |||||||| |||||||| Sbjct: 668 atccaggacaaggagggcatcccgccggaccagcagcgtcttatctttgccggcaagcag 727 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || ||||| || |||||||| || |||||| |||||| |||||| Sbjct: 728 ctggaggatggacgcacccttgcggattacaacattcagaaggagagcaccctccacctg 787 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||| ||||| || || | ||||||||||| Sbjct: 788 gtgctgcgcctcaggggaggaatgcagatcttcgtgaagacattgactggcaagaccatc 847 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || |||||||| || | |||||||| | | || ||||| ||||||||||||| Sbjct: 848 accttggaggttgagagctccgacaccattgataatgtgaaggccaagatccaggacaa- 906 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| ||| |||| |||||||||||| | ||||||||||| ||||| Sbjct: 907 ggagggtatccccccggaccagcagc-ggctcatcttcgccggcaa 951 Score = 159 bits (80), Expect = 8e-36 Identities = 195/239 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||| ||||| | |||||| ||| Sbjct: 380 ggcaagacaatcacccttgaggtggagtcctcagacaccattgacaatgtcaaggcaaag 439 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | ||||||||||| |||||||| ||||| |||||||| Sbjct: 440 atccaggacaaggagggcatccctccggaccagcaacgtctcatttttgccggcaagcag 499 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 | || ||||| || || || || ||||||||||| || |||||| |||||| ||| || Sbjct: 500 ttggaggatgggcgcacgctggccgactacaacattcagaaggagagcaccctccacttg 559 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || ||| ||||||||||||||||| ||||| | ||||||||||| Sbjct: 560 gtgctgcgtcttaggggtggtatgcagatctttgtgaaaacccttactggcaagaccat 618 Score = 143 bits (72), Expect = 5e-31 Identities = 236/298 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| ||| ||| |||||||| || || | ||||| ||| Sbjct: 836 ggcaagaccatcaccttggaggttgagagctccgacaccattgataatgtgaaggccaag 895 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||||||||||||||| |||||||| || |||||||| Sbjct: 896 atccaggacaaggagggtatccccccggaccagcagcggctcatcttcgccggcaagcag 955 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || ||||| || ||||||||||| |||||| |||||| || ||| Sbjct: 956 ctggaggatggtcgcacccttgcagattacaacatccagaaggagagcaccctccatctg 1015 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||||||||| ||| || | ||||||||||| Sbjct: 1016 gtgctccgcctgaggggcggtatgcagatctttgtgaagaccttgactggcaagaccata 1075 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 1076 accctggaggttgagagctctgacaccatcgacaacgtgaaggctaagatccaggaca 1133 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagac 248 ||||||||||||||||| ||||| | |||||||| Sbjct: 125 atgcagatctttgtgaagaccctcaccggcaagac 159
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 178 bits (90), Expect = 8e-42 Identities = 296/370 (80%), Gaps = 3/370 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 283 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctccgacaccatcgacaat 341 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| || ||||| ||||||||||| || ||||||||||||||||||| ||||| Sbjct: 342 gtcaaggccaaaatccaggacaaggaggggatccccccggaccagcagcgtctgatcttc 401 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| | || || ||||| || ||||| |||||||||||||| |||||||| Sbjct: 402 gcaggcaagcagttggaggacggccgcactcttgcggactacaacatccagaaggagtcg 461 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||| | |||||| || | ||||||||||| || || |||||| | Sbjct: 462 acgctccacctcgtgctccgtctccgtggcggcatgcagatcttcgtcaagaccctgacc 521 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | ||||||||| ||| || ||||| || Sbjct: 522 ggcaagaccatcaccctcgaggtcgagtcctccgacaccatcgacaatgttaaggccaaa 581 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaanc 360 |||||||||| ||| ||| |||| |||||||||||| | || |||||||| ||||| | Sbjct: 582 atccaggacaa-ggagggtatcccgccggaccagcagc-gtctgatcttcgcaggcaagc 639 Query: 361 attttgagga 370 | || ||||| Sbjct: 640 agttggagga 649 Score = 155 bits (78), Expect = 1e-34 Identities = 162/191 (84%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 739 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctccgacacgatcgacaac 797 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||| || |||||||| |||||||||||||| | |||||||||||||| ||||||||| Sbjct: 798 gtcaaagctaagatccaggacaaggagggcatcccgccggaccagcagcggctcatcttt 857 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || || ||||| | || || ||||| || || || |||||||||||||| ||||| || Sbjct: 858 gccggtaagcagttggaggacggccgcactctggcggactacaacatccagaaggaatca 917 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 918 accctccacct 928 Score = 153 bits (77), Expect = 5e-34 Identities = 247/310 (79%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 511 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcctccgacaccatcgacaat 569 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| || ||||| ||||||||||| || | ||||||||||||||||| ||||| Sbjct: 570 gttaaggccaaaatccaggacaaggagggtatcccgccggaccagcagcgtctgatcttc 629 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| | || || ||||| || || || |||||||||||||| |||||||| Sbjct: 630 gcaggcaagcagttggaggacggccgcactctggcggactacaacatccagaaggagtcg 689 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||| | |||||| || | ||||||||||| ||||| |||||| | Sbjct: 690 acgctccacctcgtgctccgtctccgtggcggcatgcagatcttcgtgaagaccctgacc 749 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | ||||| ||| ||| ||| || || ||| Sbjct: 750 ggcaagaccatcaccctcgaggtcgagtcctccgacacgatcgacaacgtcaaagctaag 809 Query: 301 atccaggaca 310 |||||||||| Sbjct: 810 atccaggaca 819 Score = 131 bits (66), Expect = 2e-27 Identities = 290/370 (78%), Gaps = 3/370 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 55 agaccctgaccgg-caagaccatcaccctcgaggtcgagtcgtccgacaccatcgacaat 113 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| || ||||| ||||||||||| || |||||||||||||||| | ||||| Sbjct: 114 gtcaaggccaaaatccaggacaaggaggggatccccccggaccagcagcggttgatcttc 173 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| | || || ||||| || || || |||||||||||||| |||||||| Sbjct: 174 gccggcaagcagttggaggacggccgcactctcgcggactacaacatccagaaggagtcg 233 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||| | ||||| || | ||||||||||| || || |||||| | Sbjct: 234 acgctccacctcgtcctccgtctccgtggcggcatgcagatcttcgtcaagaccctgacc 293 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | ||||| || | | ||||||||| ||| || ||||| || Sbjct: 294 ggcaagaccatcaccctcgaggtcgagtcctccgacaccatcgacaatgtcaaggccaaa 353 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaanc 360 |||||||||| ||| || |||| |||||||||||| | || |||||||| ||||| | Sbjct: 354 atccaggacaa-ggaggggatccccccggaccagcagc-gtctgatcttcgcaggcaagc 411 Query: 361 attttgagga 370 | || ||||| Sbjct: 412 agttggagga 421
>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008, complete sequence Length = 116223 Score = 178 bits (90), Expect = 8e-42 Identities = 153/176 (86%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| || ||||| |||||||||| |||||| |||||| Sbjct: 80312 aagacgatcaccctcgaggtggagtcatccgacacaatcgacaacgtcaaggccaagatc 80253 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| || | ||||||||||||||||||||||| || || ||||| || Sbjct: 80252 caagacaaggagggaatcccaccggaccagcagcgtctcatcttcgccgggaagcagctg 80193 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || ||||| ||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 80192 gaagacggccgcacacttgctgactacaacatccagaaggagtccactctccacct 80137
>ref|XM_753127.1| Ustilago maydis 521 hypothetical protein (UM02073.1) partial mRNA Length = 1164 Score = 176 bits (89), Expect = 3e-41 Identities = 275/343 (80%), Gaps = 2/343 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || ||||| |||||||| | |||||| ||| Sbjct: 730 ggcaagacgatcacccttgaggtggagtcttccgacacaatcgacaatgtcaaggccaag 789 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||| |||||||||||||||||||||||||| ||||| Sbjct: 790 atccaggacaaggagggtatcccccctgaccagcagcgtctcatctttgctggtaagcag 849 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || || | |||||||||||||| |||||||| || || ||||| Sbjct: 850 cttgaagacggccgaacgctctcggactacaacatccagaaggagtcgacacttcacctt 909 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | | | || |||| |||||||||||||| || || ||| | |||||||| || Sbjct: 910 gtgttgcgacttcgtggtggtatgcagatctttgtcaagactctgaccggcaagacgatc 969 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | ||||| ||| ||| ||| ||||| ||||||||||||| Sbjct: 970 acccttgaggtggagtcttccgacacaatcgacaacgtcaaggccaagatccaggacaa- 1028 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| ||| |||| | |||||||||| | |||||||||||||| Sbjct: 1029 ggagggtatcccccctgaccagcagc-gtctcatcttcgctgg 1070 Score = 168 bits (85), Expect = 8e-39 Identities = 154/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || ||||| |||||||||| |||||| ||| Sbjct: 958 ggcaagacgatcacccttgaggtggagtcttccgacacaatcgacaacgtcaaggccaag 1017 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||| |||||||||||||||||||| ||||| ||||| Sbjct: 1018 atccaggacaaggagggtatcccccctgaccagcagcgtctcatcttcgctggtaagcag 1077 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||||| || || | |||||||||||||| |||||||| || || ||||| Sbjct: 1078 cttgaagacggccgcacgctctcggactacaacatccagaaggagtcgacacttcacct 1136 Score = 168 bits (85), Expect = 8e-39 Identities = 274/343 (79%), Gaps = 2/343 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || ||||| |||||||| | |||||| ||| Sbjct: 256 ggcaagacgatcacccttgaggtggagtcttccgacacaatcgacaatgtcaaggccaag 315 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||| |||||||||||||||||||||||||| ||||| Sbjct: 316 atccaggacaaggagggtatcccccctgaccagcagcgtctcatctttgctggtaagcag 375 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || ||||| || || | |||||||||||||| |||||||| || || ||||| Sbjct: 376 cttgaagacggccgaacgctctcggactacaacatccagaaggagtcgacacttcacctt 435 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | | | || |||| |||||||||||||| || || ||| | |||||||| || Sbjct: 436 gtgttgcgacttcgtggtggtatgcagatctttgtcaagactctgaccggcaagacgatc 495 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacang 312 || | |||||||| | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 496 acccttgaggtggagtcttccgacacaatcgacaatgtcaaggccaagatccaggacaa- 554 Query: 313 gganggtntccctncggaccagcagcagcctcatcttcgctgg 355 ||| ||| |||| | |||||||||| | |||||||||||||| Sbjct: 555 ggagggtatcccccctgaccagcagc-gtctcatcttcgctgg 596 Score = 168 bits (85), Expect = 8e-39 Identities = 154/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || ||||| |||||||| | |||||| ||| Sbjct: 28 ggcaagacgatcacccttgaggtggagtcttccgacacaatcgacaatgtcaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||| |||||||||||||||||||||||||| ||||| Sbjct: 88 atccaggacaaggagggtatcccccctgaccagcagcgtctcatctttgctggtaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| || ||||| || || | |||||||||||||| |||||||| || || ||||| Sbjct: 148 cttgaagacggccgaacgctctcggactacaacatccagaaggagtcgacacttcacct 206 Score = 159 bits (80), Expect = 8e-36 Identities = 144/167 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||||||||||||||| || ||||| |||||||| | |||||| ||| Sbjct: 484 ggcaagacgatcacccttgaggtggagtcttccgacacaatcgacaatgtcaaggccaag 543 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||| |||||||||||||||||||| ||||| ||||| Sbjct: 544 atccaggacaaggagggtatcccccctgaccagcagcgtctcatcttcgctggtaagcag 603 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtc 179 ||||| || ||||| || || | |||||||||||||| |||||||| Sbjct: 604 cttgaagacggccgcacgctctcggactacaacatccagaaggagtc 650
>emb|X60390.1|CGPOLYUGE C.griseus gene for polyubiquitin Length = 1603 Score = 174 bits (88), Expect = 1e-40 Identities = 166/193 (86%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| || Sbjct: 649 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaat 707 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||||||||| |||| ||||||||||| ||||||||| Sbjct: 708 gtcaaggccaagatccaggataaggagggcatcccccccgaccagcagcgactcatcttt 767 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 768 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 827 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 828 accctgcacctgg 840 Score = 168 bits (85), Expect = 8e-39 Identities = 206/251 (82%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| |||||||| || |||||||||||| || Sbjct: 877 agaccctgaccgg-caagaccatcaccctagaggtggaacccagtgacaccatcgagaat 935 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||||||||| |||| ||||||||||| ||||||||| Sbjct: 936 gtcaaggccaagatccaggataaggagggcatcccccccgaccagcagcgactcatcttt 995 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 996 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 1055 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 1056 accctgcacctggtcctccgcctcaggggtggcatgcagatcttcgtgaagaccctgact 1115 Query: 241 ggcaagaccat 251 ||||||||||| Sbjct: 1116 ggcaagaccat 1126 Score = 168 bits (85), Expect = 8e-39 Identities = 206/251 (82%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| |||||||| || |||||||||||| || Sbjct: 421 agaccctgaccgg-caagaccatcaccctagaggtggaacccagtgacaccatcgagaat 479 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||||||||| |||| ||||||||||| ||||||||| Sbjct: 480 gtcaaggccaagatccaggataaggagggcatcccccccgaccagcagcgactcatcttt 539 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 540 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 599 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 600 accctgcacctggtcctccgcctcaggggtggcatgcagatcttcgtgaagaccctgacc 659 Query: 241 ggcaagaccat 251 ||||||||||| Sbjct: 660 ggcaagaccat 670 Score = 167 bits (84), Expect = 3e-38 Identities = 165/193 (85%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| || Sbjct: 193 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgaaaat 251 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || || |||||||| |||| ||||||||||| ||||||||| Sbjct: 252 gtcaaggccaagatccaggataaagagggcatcccccccgaccagcagcgactcatcttt 311 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 312 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 371 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 372 accctgcacctgg 384 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| || Sbjct: 1105 agaccctgactgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaat 1163 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||||| ||||||||| Sbjct: 1164 gtgaaggccaagatccaggataaagagggcatcccccccgaccagcagcgactcatcttt 1223 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 1224 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 1283 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1284 accctgcacctgg 1296 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||| ||||| ||||| |||||| | ||||||||||| Sbjct: 177 atgcaaatcttcgtgaagaccctgaccggcaagaccat 214
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 174 bits (88), Expect = 1e-40 Identities = 197/239 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| ||||||||||||||||||||||| |||||||| ||||| | |||||| ||| Sbjct: 1480 ggcaagacaatcacccttgaggtggagtcctcagacaccattgacaatgtcaaggcaaag 1539 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || |||||||| |||||||||||||| |||||||| Sbjct: 1540 atccaggacaaggagggcatcccacctgaccagcaacgtctcatctttgccggcaagcag 1599 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 | || ||||| | || |||||||||||||||||||| |||||| |||||| ||| || Sbjct: 1600 ttggaggatgggaggacccttgctgactacaacatccagaaggagagcaccctccacttg 1659 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || ||| ||||||||||||||||| ||||| | ||||||||||| Sbjct: 1660 gtgctgcgtcttaggggtggtatgcagatctttgtgaaaacccttactggcaagaccat 1718 Score = 174 bits (88), Expect = 1e-40 Identities = 240/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||| ||||||||||| ||||| | |||||| ||| Sbjct: 1252 ggcaagactatcaccctcgaggtggagtcttctgacaccattgacaatgtcaaggctaag 1311 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | || ||||||||||| || ||||| || |||||||| Sbjct: 1312 atccaggacaaggagggcatccctcctgaccagcagcggcttatcttcgccggcaagcag 1371 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || ||||||||||||||||||||||| |||||||| ||||| ||| || Sbjct: 1372 cttgaggacggacgcacacttgctgactacaacatccagaaggagtcaaccctccacttg 1431 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || ||| |||||||||||||| || ||| || | |||||||| || Sbjct: 1432 gtgctgcgccttaggggaggcatgcagatctttgtcaagaccttgactggcaagacaatc 1491 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || | |||||||| | | |||||||| ||| || ||||| ||||||||||||| Sbjct: 1492 acccttgaggtggagtcctcagacaccattgacaatgtcaaggcaaagatccaggaca 1549 Score = 167 bits (84), Expect = 3e-38 Identities = 164/193 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| |||||||||||||||||||| ||||| ||| Sbjct: 2164 ggcaagaccataaccctggaggttgagagctctgacaccatcgacaacgtgaaggctaag 2223 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| |||| |||||||||||||| ||||| || |||||||| Sbjct: 2224 atccaggacaaggaggggattcccccagaccagcagcgtctgatcttcgccggcaagcag 2283 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || ||||| |||||||| ||||| |||||| |||||| |||||| Sbjct: 2284 ctggaggatggtcgcacccttgcagactacaatatccagaaggagagcaccctccacctg 2343 Query: 193 gagctccgncttc 205 | |||||| |||| Sbjct: 2344 gtgctccgtcttc 2356 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| |||||||||||||| || || ||||| ||||| | |||||| ||| Sbjct: 1708 ggcaagaccatcactcttgaggtggagtcttcagataccattgacaatgtcaaggccaag 1767 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| | ||||||||||||||||| |||||||| |||||||| Sbjct: 1768 atccaggacaaggagggcatcccgccggaccagcagcgtcttatctttgccggcaagcag 1827 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || ||||| || |||||||| || |||||| |||||| |||||| Sbjct: 1828 ctggaggatggacgcacccttgcggattacaacattcagaaggagagcaccctccacctg 1887 Query: 193 g 193 | Sbjct: 1888 g 1888 Score = 127 bits (64), Expect = 3e-26 Identities = 234/298 (78%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| ||| ||| |||||||| || || | ||||| ||| Sbjct: 1936 ggcaagaccatcaccttggaggttgagagctccgacaccattgataatgtgaaggccaag 1995 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| | || ||||||||||| || ||||| || |||||||| Sbjct: 1996 atccaggacaaagagggcatccctcctgaccagcagcggcttatcttcgccggcaagcag 2055 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || || || ||||||||||| |||||||| || |||||| |||||| ||| || Sbjct: 2056 cttgaggacggacgcacacttgctgattacaacatacagaaggagagcaccctccacttg 2115 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || ||| ||||||||||||||||| ||| || | ||||||||||| Sbjct: 2116 gtgctgcgccttaggggaggcatgcagatctttgtgaagaccttgactggcaagaccata 2175 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 2176 accctggaggttgagagctctgacaccatcgacaacgtgaaggctaagatccaggaca 2233 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagac 248 ||||||||||||||||| ||||| | |||||||| Sbjct: 1225 atgcagatctttgtgaagaccctcaccggcaagac 1259
>gb|BC070919.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:91487 IMAGE:7104905), complete cds Length = 1170 Score = 172 bits (87), Expect = 5e-40 Identities = 248/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 545 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 603 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 604 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 663 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| |||||||| Sbjct: 664 gccggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaggagtca 723 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 724 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 783 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 784 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 843 Query: 301 atccagga 308 |||||||| Sbjct: 844 atccagga 851 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 89 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 147 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 148 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 207 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| || ||||| Sbjct: 208 gccggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtca 267 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 268 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 327 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 328 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 387 Query: 301 atccagga 308 |||||||| Sbjct: 388 atccagga 395 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 773 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 831 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 832 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 891 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 892 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 951 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 952 accctgcacctgg 964 Score = 141 bits (71), Expect = 2e-30 Identities = 244/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 317 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 375 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 376 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 435 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 436 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 495 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | ||||| || ||||||||||| ||||| |||||| | Sbjct: 496 accctgcaccttgtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 555 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 556 ggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaaggccaag 615 Query: 301 atccagga 308 |||||||| Sbjct: 616 atccagga 623 Score = 44.1 bits (22), Expect = 0.32 Identities = 75/95 (78%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||| ||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 73 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 132 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 133 gacaccatcgagaacgtgaaggccaagatccagga 167
>gb|BC000379.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:8385 IMAGE:2820408), complete cds Length = 989 Score = 172 bits (87), Expect = 5e-40 Identities = 156/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 166 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 225 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 226 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 285 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || |||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 286 ctggaagacggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 345 Query: 193 g 193 | Sbjct: 346 g 346 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 611 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 669 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 670 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 729 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 730 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 789 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 790 accctgcacctgg 802 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 383 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 441 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 442 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 501 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 502 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 561 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 562 accctgcacctgg 574 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 595 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 647 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 367 atgcagatcttcgtgaagaccctgaccggcaagaccat 404 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 139 atgcagatcttcgtgaaaacccttaccggcaagaccat 176
>gb|AY478418.1| Clusia minor polyubiquitin (Ubq1) mRNA, partial cds Length = 750 Score = 172 bits (87), Expect = 5e-40 Identities = 148/170 (87%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||||||||| ||| ||| |||||||| ||||| | |||||| |||||| Sbjct: 345 aagaccatcacccttgaggttgagagctcggacaccattgacaatgtcaaggctaagatc 404 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| |||||||||||||| | | ||||||||||||||||| ||| Sbjct: 405 caagataaggagggcattcccccggaccagcagaggttgatctttgctggcaagcagctt 464 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 || ||||| ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 465 gaggatgggcgtactcttgcagactacaacatccagaaggaatccaccct 514 Score = 159 bits (80), Expect = 8e-36 Identities = 184/224 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||||||| ||| ||||| || ||||||| |||||| ||| Sbjct: 114 ggcaagactatcaccttggaggtggagagctccgacacaattgacaacgtcaaggctaag 173 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| ||| |||||||||||||| | ||||| || ||||||||||| Sbjct: 174 atccaggacaaggaggggattcccccggaccagcagaggctcatattcgctggcaagcag 233 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| || |||||||| ||||| || |||||||||||||| ||| || Sbjct: 234 ctggaggatggccgtacgctggctgactataacattcagaaggagtccaccctccacttg 293 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccct 236 | ||||| || | ||||||||||||||||| ||||| Sbjct: 294 gttctccgtctacgtggtggcatgcagatctttgtgaagaccct 337 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/66 (87%) Strand = Plus / Plus Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| || |||||||| |||||||| ||||||||||| |||||||||||||| ||| || Sbjct: 6 cttgaagacggccgtacccttgctgattacaacatccagaaggagtccaccctccacttg 65 Query: 193 gagctc 198 | |||| Sbjct: 66 gtgctc 71 Score = 54.0 bits (27), Expect = 3e-04 Identities = 89/108 (82%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 64 aaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgc- 122 ||||| |||||||| ||||||||||| | | |||| ||||| ||||| | || ||||| Sbjct: 624 aaggccaagatccaggacaaggagggga-tcccccagaccaacagcggntgatttttgca 682 Query: 123 tggcaagcancttgangatggccgtacacttgctgactacaacatcca 170 | ||||| ||||||||||| ||||| ||||| |||||||||||||| Sbjct: 683 ngnaaagcagcttgangatgggcgtactcttgcagactacaacatcca 730 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 |||||||||||||| || ||||| | |||||||| || || ||||||||||| Sbjct: 87 atgcagatctttgttaagaccctcactggcaagactatcaccttggaggtgga 139
>emb|X75628.1|ACUBIFUS A.castellanii mRNA for ubiquitin fusion protein Length = 525 Score = 172 bits (87), Expect = 5e-40 Identities = 159/185 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||||| || ||||||||||| || | |||| ||||||| Sbjct: 91 aagaccatcaccctcgaggtcgagtcgtccgacaccatcgagaatgtcaagcagaagatc 150 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||||||| | ||||| ||||||||||| || || || |||||||| ||| Sbjct: 151 caggacaaggagggcattcctccggatcagcagcgtctgattttcgccggcaagcagctt 210 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || |||||||| || ||||| ||||||||||| |||||||||||||| ||||||| | Sbjct: 211 gaggacggccgtaccctcgctgattacaacatccagaaggagtccaccctccacctggtg 270 Query: 196 ctccg 200 ||||| Sbjct: 271 ctccg 275
>gb|AY891423.1| Synthetic construct Homo sapiens clone FLH017070.01L ubiquitin B (UBB) mRNA, partial cds Length = 690 Score = 172 bits (87), Expect = 5e-40 Identities = 156/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || |||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 148 ctggaagacggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>gb|AY888785.1| Synthetic construct Homo sapiens clone FLH017074.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 172 bits (87), Expect = 5e-40 Identities = 156/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || |||||||| ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 148 ctggaagacggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>dbj|AB089620.1| Gorilla gorilla UbB gene for polyubiquitin B, complete cds Length = 690 Score = 172 bits (87), Expect = 5e-40 Identities = 156/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 148 ctggaagatggccgcactctttctgactacaacatccagaaggagtcgaccctgcacctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgactgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 127 bits (64), Expect = 3e-26 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgactggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>dbj|AB089618.1| Pongo pygmaeus UbB gene for polyubiquitin B, complete cds Length = 690 Score = 172 bits (87), Expect = 5e-40 Identities = 156/181 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| || ||||| ||||| |||||| Sbjct: 148 ctggaagatggccgtactctttctgactacaacatccagaaagagtcgaccctgcacctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| |||| ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatcccccctgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| || Sbjct: 245 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || |||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcattcctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || ||||| || || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggtcgcactctttctgactacaacatccagaaggagtca 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtgga 509 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtgga 281 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttactggcaagaccat 38
>dbj|AK108207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D06, full insert sequence Length = 686 Score = 172 bits (87), Expect = 5e-40 Identities = 159/185 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||||||||||||||| || |||||||||||||||| |||||| |||||| Sbjct: 83 aagaccatcacccttgaggtggagtcttcggacaccatcgacaacgtcaaggccaagatc 142 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||| ||||||||||| || ||||| || || ||||| || Sbjct: 143 caggacaaggagggcatcccccctgaccagcagcgccttatcttcgccggtaagcagctc 202 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || ||||| || ||| | |||||||||||||| |||||||| ||||| ||||| | | Sbjct: 203 gaggacggccgcaccctttcggactacaacatccagaaggagtcgaccctccacctcgtg 262 Query: 196 ctccg 200 ||||| Sbjct: 263 ctccg 267 Score = 63.9 bits (32), Expect = 3e-07 Identities = 79/97 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||||||||| || ||||| |||| |||||||| || | |||||||| | | Sbjct: 53 atgcagatctttgtcaagacccttacgggtaagaccatcacccttgaggtggagtcttcg 112 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 113 gacaccatcgacaacgtcaaggccaagatccaggaca 149
>gb|U74358.1|MDU74358 Malus domestica ubiquitin mRNA, partial cds Length = 238 Score = 172 bits (87), Expect = 5e-40 Identities = 148/170 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||||||||| || |||||||||||||| | |||||| || Sbjct: 38 ggcaagaccattaccctcgaggtggagtcatccgacaccatcgacaatgtcaaggccaaa 97 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||| | || ||||||||||| ||||| Sbjct: 98 atccaggacaaggagggcatccccccagaccagcagaggcttatctttgctggaaagcag 157 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 ||||| || |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 158 cttgaggacggccgtacccttgccgactacaacatccagaaggagtccac 207
>dbj|D28123.1|SOYSUBI3 Glycine max SUBI-3 gene for ubiquitin, complete cds Length = 2170 Score = 170 bits (86), Expect = 2e-39 Identities = 144/165 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| Sbjct: 947 ggcaagaccatcacccttgaggtggaaagctctgacaccatcgacaacgtcaaggccaag 1006 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || ||||||||||||| |||||||| || || || ||||| Sbjct: 1007 atccaggacaaggaaggaatccccccggaccagcaacgtctcattttcgccggaaagcaa 1066 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggag 177 ||||| || |||||||| ||||||||||||||||| || |||||| Sbjct: 1067 cttgaggacggccgtacccttgctgactacaacattcagaaggag 1111 Score = 129 bits (65), Expect = 7e-27 Identities = 149/179 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| || ||| ||||||||||| |||| |||||| ||| Sbjct: 1175 ggcaagaccataaccctagaggttgaaagctccgacaccatcgataacgtcaaggccaag 1234 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || ||||||||||||| ||||||||||| || || ||||| Sbjct: 1235 atccaggacaaggagggtatccccccggaccagcaacgtctcatcttcgccggaaagcag 1294 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || || |||||||||||||| ||||| || ||||| ||||| Sbjct: 1295 ctcgaggacggccgcaccctcgccgactacaacatccagaaggaatcaacccttcacct 1353 Score = 107 bits (54), Expect = 3e-20 Identities = 144/176 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| || ||||| ||||||||| |||||||||||| ||||| | ||||| ||||| Sbjct: 1634 aagactattaccctcgaggtggagagctctgacaccattgacaatgtgaaggccaagatt 1693 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| ||||| | |||||||||||| | || || |||||||||||||| || Sbjct: 1694 caggacaaggaaggcatcccaccggaccagcagaggctgatttttgctggcaagcagctc 1753 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || ||||| | || || ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 1754 gaggatggaaggaccctcgctgactacaacatccagaaggaatcaacccttcacct 1809 Score = 101 bits (51), Expect = 2e-18 Identities = 112/134 (83%) Strand = Plus / Plus Query: 46 gacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggaccag 105 |||||||||||||||| |||||| ||||| || ||||||||||| || |||| |||||| Sbjct: 1436 gacaccatcgacaacgtcaaggctaagattcaggacaaggagggaatccccccagaccag 1495 Query: 106 cagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaac 165 ||| | || ||||| || || ||||| || || || || || || ||||||||||||||| Sbjct: 1496 cagaggctgatcttcgccgggaagcagctcgaggacggacgcacccttgctgactacaac 1555 Query: 166 atccanaaggagtc 179 ||||| |||||||| Sbjct: 1556 atccagaaggagtc 1569 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| || || ||||| | ||||||||||| || | |||||||| | Sbjct: 920 atgcagatcttcgtcaagaccctcaccggcaagaccatcacccttgaggtggaaagctct 979 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||||||||||| Sbjct: 980 gacaccatcgacaacgtcaaggccaagatccaggaca 1016 Score = 42.1 bits (21), Expect = 1.3 Identities = 52/63 (82%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| | | ||| ||||| ||||||||||||| ||| ||| |||| ||||||| Sbjct: 1208 gacaccatcgataacgtcaaggccaagatccaggacaa-ggagggtatccccccggacca 1266 Query: 334 gca 336 ||| Sbjct: 1267 gca 1269
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 170 bits (86), Expect = 2e-39 Identities = 150/173 (86%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||| |||||||||||||||||||||| || ||||| |||||||| | ||||||||| Sbjct: 5073383 ggcaagtccatcacccttgaggtggagtcatccgacacaatcgacaatgtgaaggcgaag 5073324 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||| ||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 5073323 atccaggataaggagggtattcccccggaccagcagcgcctcatcttcgctggcaagcag 5073264 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 || || || || || || ||||||||||||||||| || |||||||| ||||| Sbjct: 5073263 ctcgaggaaggacgcacccttgctgactacaacattcagaaggagtcgaccct 5073211 Score = 71.9 bits (36), Expect = 1e-09 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||| |||| || | |||||||| | Sbjct: 5073410 atgcagatctttgtgaaaaccctgaccggcaagtccatcacccttgaggtggagtcatcc 5073351 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||| ||| || ||||||||||||||||| | ||| ||| | || ||||||| Sbjct: 5073350 gacacaatcgacaatgtgaaggcgaagatccaggataa-ggagggtattcccccggacca 5073292 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||||||||| Sbjct: 5073291 gcagc-gcctcatcttcgctggcaa 5073268 Score = 42.1 bits (21), Expect = 1.3 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Minus Query: 19 accatcacccttgaggtggagtcc-tctgacaccatcgacaacgacaaggcgaagatcca 77 ||||||||||| ||||| ||| || || ||||| |||||| ||| |||||||||||||| Sbjct: 5088278 accatcaccctcgaggt-gagaccatccgacacgatcgacgacgtgaaggcgaagatcca 5088220 Query: 78 ngacaagg 85 ||||||| Sbjct: 5088219 ggacaagg 5088212 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 288 cgtnaaggcgaagatccaggaca 310 ||| ||||||||||||||||||| Sbjct: 5088237 cgtgaaggcgaagatccaggaca 5088215
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 170 bits (86), Expect = 2e-39 Identities = 150/173 (86%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||| |||||||||||||||||||||| || ||||| |||||||| | ||||||||| Sbjct: 110940 ggcaagtccatcacccttgaggtggagtcatccgacacaatcgacaatgtgaaggcgaag 110881 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||| ||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 110880 atccaggataaggagggtattcccccggaccagcagcgcctcatcttcgctggcaagcag 110821 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 || || || || || || ||||||||||||||||| || |||||||| ||||| Sbjct: 110820 ctcgaggaaggacgcacccttgctgactacaacattcagaaggagtcgaccct 110768 Score = 71.9 bits (36), Expect = 1e-09 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||| |||| || | |||||||| | Sbjct: 110967 atgcagatctttgtgaaaaccctgaccggcaagtccatcacccttgaggtggagtcatcc 110908 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||| ||| || ||||||||||||||||| | ||| ||| | || ||||||| Sbjct: 110907 gacacaatcgacaatgtgaaggcgaagatccaggataa-ggagggtattcccccggacca 110849 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||||||||| Sbjct: 110848 gcagc-gcctcatcttcgctggcaa 110825 Score = 42.1 bits (21), Expect = 1.3 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Minus Query: 19 accatcacccttgaggtggagtcc-tctgacaccatcgacaacgacaaggcgaagatcca 77 ||||||||||| ||||| ||| || || ||||| |||||| ||| |||||||||||||| Sbjct: 125835 accatcaccctcgaggt-gagaccatccgacacgatcgacgacgtgaaggcgaagatcca 125777 Query: 78 ngacaagg 85 ||||||| Sbjct: 125776 ggacaagg 125769 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 288 cgtnaaggcgaagatccaggaca 310 ||| ||||||||||||||||||| Sbjct: 125794 cgtgaaggcgaagatccaggaca 125772
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 170 bits (86), Expect = 2e-39 Identities = 150/173 (86%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||| |||||||||||||||||||||| || ||||| |||||||| | ||||||||| Sbjct: 23147 ggcaagtccatcacccttgaggtggagtcatccgacacaatcgacaatgtgaaggcgaag 23088 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||| ||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 23087 atccaggataaggagggtattcccccggaccagcagcgcctcatcttcgctggcaagcag 23028 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 || || || || || || ||||||||||||||||| || |||||||| ||||| Sbjct: 23027 ctcgaggaaggacgcacccttgctgactacaacattcagaaggagtcgaccct 22975 Score = 71.9 bits (36), Expect = 1e-09 Identities = 117/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||||| |||| || | |||||||| | Sbjct: 23174 atgcagatctttgtgaaaaccctgaccggcaagtccatcacccttgaggtggagtcatcc 23115 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||| ||| || ||||||||||||||||| | ||| ||| | || ||||||| Sbjct: 23114 gacacaatcgacaatgtgaaggcgaagatccaggataa-ggagggtattcccccggacca 23056 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||||||||| Sbjct: 23055 gcagc-gcctcatcttcgctggcaa 23032 Score = 42.1 bits (21), Expect = 1.3 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Minus Query: 19 accatcacccttgaggtggagtcc-tctgacaccatcgacaacgacaaggcgaagatcca 77 ||||||||||| ||||| ||| || || ||||| |||||| ||| |||||||||||||| Sbjct: 38042 accatcaccctcgaggt-gagaccatccgacacgatcgacgacgtgaaggcgaagatcca 37984 Query: 78 ngacaagg 85 ||||||| Sbjct: 37983 ggacaagg 37976 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 288 cgtnaaggcgaagatccaggaca 310 ||| ||||||||||||||||||| Sbjct: 38001 cgtgaaggcgaagatccaggaca 37979
>dbj|AB003731.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 2817 Score = 170 bits (86), Expect = 2e-39 Identities = 215/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 2122 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 2180 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 2181 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2240 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 2241 gccggcaagcagctggaagatggccgcactctgtctgactacaacatccagaaggagtcc 2300 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2301 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 2360 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 2361 ggcaagaccatcaccctggaggt 2383 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1438 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1496 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1497 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1556 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1557 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 1616 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1617 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1676 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 1677 ggcaagaccatcaccctggaggt 1699 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1210 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1268 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1269 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1328 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1329 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 1388 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1389 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1448 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 1449 ggcaagaccatcaccctggaggt 1471 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 982 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1040 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1041 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1100 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1101 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 1160 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1161 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1220 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 1221 ggcaagaccatcaccctggaggt 1243 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 754 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 812 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 813 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 872 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 873 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 932 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 933 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 992 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 993 ggcaagaccatcaccctggaggt 1015 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 526 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 584 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 585 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 644 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 645 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 704 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 705 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 764 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 765 ggcaagaccatcaccctggaggt 787 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 2350 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 2408 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 2409 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2468 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| |||||||| Sbjct: 2469 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtct 2528 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2529 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 2588 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 2589 ggcaagaccatcaccctggaggt 2611 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| ||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1894 agaccctgacagg-caaaaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1952 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1953 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2012 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2013 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 2072 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2073 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 2132 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 2133 ggcaagaccatcaccctggaggt 2155 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1666 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1724 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1725 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1784 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1785 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 1844 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1845 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1904 Query: 241 ggcaagaccatnacattggaggt 263 ||||| ||||| || ||||||| Sbjct: 1905 ggcaaaaccatcaccctggaggt 1927 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| ||||||||||| ||||| ||| || |||||||||||| || Sbjct: 298 agaccctgacagg-caaaaccatcaccctggaggtcgagcccagtgacaccatcgagaat 356 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 357 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 416 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 417 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 476 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 477 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 536 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 537 ggcaagaccatcaccctggaggt 559 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| ||||||||||| ||||| ||| || |||||||||||| || Sbjct: 70 agaccctgacagg-caaaaccatcaccctggaggtcgagcccagtgacaccatcgagaat 128 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 129 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 188 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 189 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 248 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 249 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 308 Query: 241 ggcaagaccatnacattggaggt 263 ||||| ||||| || ||||||| Sbjct: 309 ggcaaaaccatcaccctggaggt 331 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/50 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||| ||||| || ||||||| Sbjct: 54 atgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 103
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 168 bits (85), Expect = 8e-39 Identities = 154/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||| ||||||||| || ||||||| ||||| ||| Sbjct: 3 ggcaagaccatcacccttgaggtcgagagctctgacactattgacaacgtgaaggctaag 62 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| ||||||||| | |||||||| ||||| ||||| Sbjct: 63 atccaggacaaggagggcattcccccagaccagcagaggctcatcttcgctggaaagcaa 122 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || ||||||||||| | |||||||||||||| || ||||| |||||||| ||||| Sbjct: 123 ctcgaggatggccgtactttggctgactacaacattcagaaggaatccacccttcacct 181 Score = 119 bits (60), Expect = 7e-24 Identities = 190/239 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| ||| ||| || ||||| ||||| | |||||| || Sbjct: 231 ggcaagaccatcacccttgaggtcgagagctcggataccattgacaatgtcaaggccaaa 290 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || ||||||||||| || | || || |||||| | || ||||| ||||| ||||| Sbjct: 291 attcaggacaaggagggaatcccaccagatcagcagaggcttatcttcgctggaaagcag 350 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 ||||| |||||||| || | ||||||||||||||||| |||||||||||||| ||| || Sbjct: 351 cttgaggatggccgcactttggctgactacaacatccagaaggagtccacccttcacttg 410 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||||| || | ||||| ||||||||||| ||| || | ||||||||||| Sbjct: 411 gtcctccgtctccgtggtggtatgcaaatctttgtgaagaccttgaccggcaagaccat 469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/146 (82%) Strand = Plus / Plus Query: 46 gacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggaccag 105 |||||||| ||||| | ||||| ||||| || ||||||||||| || | ||||||||| Sbjct: 720 gacaccattgacaatgtgaaggctaagattcaggacaaggagggtatcccaccggaccag 779 Query: 106 cagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaac 165 ||| | |||||||| ||||| ||||| ||||| ||||| ||||| || || |||||||| Sbjct: 780 cagaggctcatcttcgctggtaagcagcttgaggatggtcgtaccctggccgactacaat 839 Query: 166 atccanaaggagtccaccctncacct 191 ||||| |||||||| || || ||||| Sbjct: 840 atccagaaggagtcgactcttcacct 865 Score = 95.6 bits (48), Expect = 1e-16 Identities = 136/167 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| ||| ||| |||||||| ||||| | |||||| ||| Sbjct: 459 ggcaagaccattaccctcgaggtcgagagctccgacaccattgacaatgtcaaggccaag 518 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || ||||||||| | |||||||| ||||| ||||| Sbjct: 519 atccaggacaaggaggggatcccaccagaccagcagaggctcatcttcgctggtaagcag 578 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtc 179 ||||| ||||| || || | || ||||||||||| || || ||||| Sbjct: 579 cttgaggatggtcgcaccttggccgactacaacattcagaaagagtc 625 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| || ||| | ||||||||||| Sbjct: 204 atgcagatctttgtgaagactctgaccggcaagaccat 241 Score = 46.1 bits (23), Expect = 0.081 Identities = 68/82 (82%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 292 aaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctcatcttcg 351 ||||| ||||| ||||||| || | ||| |||| ||||||||||| || |||||||||| Sbjct: 738 aaggctaagattcaggacaagg-agggtatcccaccggaccagcag-aggctcatcttcg 795 Query: 352 ctggcaancattttgaggatgg 373 |||| || || |||||||||| Sbjct: 796 ctggtaagcagcttgaggatgg 817
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 168 bits (85), Expect = 8e-39 Identities = 154/179 (86%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||||||||| || || ||||| | ||||| ||| Sbjct: 17341 ggcaagaccatcaccctcgaggttgagtcctctgatacaattgacaatgtgaaggccaag 17282 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || ||||||||||||||| | || |||||||| ||||||||||||||||||||||| Sbjct: 17281 attcaggacaaggagggcattccacctgaccagcaacgtctcatctttgctggcaagcaa 17222 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || || || || ||||||||||| |||||||||||||| ||||| Sbjct: 17221 ctagaggatggccgcaccctcgcggattacaacatccagaaggagtccaccctccacct 17163 Score = 165 bits (83), Expect = 1e-37 Identities = 158/185 (85%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| |||| ||| |||||||| |||| |||||||| | ||||||||||| Sbjct: 17110 aagaccatcactcttgcggtcgagtcctcggacaagatcgacaatgtgaaggcgaagatt 17051 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||||||||||||||| ||||||||||| | |||||| || Sbjct: 17050 caggacaaggagggaattcccccggaccagcagcgcctcatctttgcagacaagcagctc 16991 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| |||||||| ||||| |||||||| || |||||||||||| | ||||||| | Sbjct: 16990 gaggatggacgtacactggctgattacaacattcagaaggagtccaccttgcacctggtg 16931 Query: 196 ctccg 200 ||||| Sbjct: 16930 ctccg 16926 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| || || | ||||||||||| Sbjct: 17368 atgcagatctttgtgaagacactcactggcaagaccat 17331 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| ||| || | || |||||||| Sbjct: 17140 atgcagatctttgtgaagaccttgacaggaaagaccat 17103
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 168 bits (85), Expect = 8e-39 Identities = 154/179 (86%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||||||||||| || || ||||| | ||||| ||| Sbjct: 145205 ggcaagaccatcaccctcgaggttgagtcctctgatacaattgacaatgtgaaggccaag 145146 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || ||||||||||||||| | || |||||||| ||||||||||||||||||||||| Sbjct: 145145 attcaggacaaggagggcattccacctgaccagcaacgtctcatctttgctggcaagcaa 145086 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || || || || ||||||||||| |||||||||||||| ||||| Sbjct: 145085 ctagaggatggccgcaccctcgcggattacaacatccagaaggagtccaccctccacct 145027 Score = 165 bits (83), Expect = 1e-37 Identities = 158/185 (85%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| |||| ||| |||||||| |||| |||||||| | ||||||||||| Sbjct: 144974 aagaccatcactcttgcggtcgagtcctcggacaagatcgacaatgtgaaggcgaagatt 144915 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||||||||||||||| ||||||||||| | |||||| || Sbjct: 144914 caggacaaggagggaattcccccggaccagcagcgcctcatctttgcagacaagcagctc 144855 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| |||||||| ||||| |||||||| || |||||||||||| | ||||||| | Sbjct: 144854 gaggatggacgtacactggctgattacaacattcagaaggagtccaccttgcacctggtg 144795 Query: 196 ctccg 200 ||||| Sbjct: 144794 ctccg 144790 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| || || | ||||||||||| Sbjct: 145232 atgcagatctttgtgaagacactcactggcaagaccat 145195 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| ||| || | || |||||||| Sbjct: 145004 atgcagatctttgtgaagaccttgacaggaaagaccat 144967
>emb|X08013.1|CSUBIQ Chinese hamster mRNA for ubiquitin Length = 752 Score = 168 bits (85), Expect = 8e-39 Identities = 206/251 (82%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| |||||||| || |||||||||||| || Sbjct: 329 agaccctgaccgg-caagaccatcaccctagaggtggaacccagtgacaccatcgagaat 387 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||||||||| |||| ||||||||||| ||||||||| Sbjct: 388 gtcaaggccaagatccaggataaggagggcatcccccccgaccagcagcgactcatcttt 447 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 448 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 507 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 508 accctgcacctggtcctccgcctcaggggtggcatgcagatcttcgtgaagaccctgact 567 Query: 241 ggcaagaccat 251 ||||||||||| Sbjct: 568 ggcaagaccat 578 Score = 167 bits (84), Expect = 3e-38 Identities = 165/193 (85%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| || Sbjct: 101 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgaaaat 159 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || || |||||||| |||| ||||||||||| ||||||||| Sbjct: 160 gtcaaggccaagatccaggataaagagggcatcccccccgaccagcagcgactcatcttt 219 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 220 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 279 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 280 accctgcacctgg 292 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| || Sbjct: 557 agaccctgactgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaat 615 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||||| ||||||||| Sbjct: 616 gtgaaggccaagatccaggataaagagggcatcccccccgaccagcagcgactcatcttt 675 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || |||||| Sbjct: 676 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcc 735 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 736 accctgcacctgg 748 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||| ||||| ||||| |||||| | ||||||||||| Sbjct: 85 atgcaaatcttcgtgaagaccctgaccggcaagaccat 122
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 168 bits (85), Expect = 8e-39 Identities = 154/179 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| ||||||||||||||||| | |||||| ||| Sbjct: 256 ggcaagaccatcaccctcgaggtggagagttctgacaccatcgacaatgtcaaggctaag 315 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || || |||||||||||| | || |||||||| | ||||||||||| |||||||| Sbjct: 316 attcaggataaggagggcattcctccagaccagcaaaggctcatctttgccggcaagcag 375 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 376 cttgaggatggccgcaccctggctgattacaacatccagaaggagtccaccctccacct 434 Score = 161 bits (81), Expect = 2e-36 Identities = 153/179 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| ||||||||||||||||| | |||||| ||| Sbjct: 484 ggcaagaccatcaccctcgaggtggagagttctgacaccatcgacaatgtcaaggccaag 543 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || || |||||||||||| | |||||||||||| | ||||||||||| |||||||| Sbjct: 544 attcaggataaggagggcattccaccggaccagcagaggctcatctttgccggcaagcag 603 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || | ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 604 ctggaggacggccgcaccttggctgattacaacatccagaaggagtccaccctccacct 662 Score = 161 bits (81), Expect = 2e-36 Identities = 153/179 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||| || |||||||||||||||||||| | |||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggttgaatcctctgacaccatcgacaatgtcaaggctaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| ||||| || | || |||||||| | || |||||||| || ||||| Sbjct: 88 atccaggacaaagagggaatccctccagaccagcaaaggctgatctttgccggtaagcaa 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 148 cttgaggatggccggacccttgcggattacaacatccagaaggagtccaccctccacct 206 Score = 147 bits (74), Expect = 3e-32 Identities = 149/176 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||| |||||||| ||| |||||||||||||| | ||||| ||||| Sbjct: 715 aagaccatcacccttaaggtggagagctcggacaccatcgacaatgtaaaggccaagatt 774 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| ||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 775 caggacaaggagggtattcccccggaccagcaaaggctcatctttgccggcaagcagctt 834 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || |||||||| || || || || |||||||| || |||||||| ||||| ||||| Sbjct: 835 gaggatggccgcaccctggcagattacaacattcagaaggagtctacccttcacct 890 Score = 93.7 bits (47), Expect = 4e-16 Identities = 149/185 (80%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| ||| | ||||||||| ||| ||||| || || || | |||||| |||||| Sbjct: 943 aagaccattaccttggaggtggagagctcggacacgattgataatgtcaaggcaaagatc 1002 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| | ||||| |||||| | || ||||||||||| ||||| || Sbjct: 1003 caggacaaggaggggattccaccggatcagcagaggctgatctttgctgggaagcagctg 1062 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || || || || || || || |||||||| || ||||| |||||||| ||||||| | Sbjct: 1063 gaggacgggcgcaccctggcagattacaacattcagaaggaatccacccttcacctggtg 1122 Query: 196 ctccg 200 ||||| Sbjct: 1123 ctccg 1127 Score = 40.1 bits (20), Expect = 5.0 Identities = 76/97 (78%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||||||||| || || || | ||||||||||| || | ||||| || | | Sbjct: 1 atgcagatctttgttaaaactctcactggcaagaccatcacccttgaggttgaatcctct 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||| ||||||||||||| Sbjct: 61 gacaccatcgacaatgtcaaggctaagatccaggaca 97
>gb|U29160.1|ZMU29160 Zea mays clone MubG10 ubiquitin fusion protein gene, complete cds Length = 1437 Score = 168 bits (85), Expect = 8e-39 Identities = 162/190 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | |||||||||||||| |||||||||||||| | ||||| |||||| Sbjct: 757 aagaccatcactttggaggtggagtcctcggacaccatcgacaatgtgaaggccaagatc 816 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||||||||||||||| |||||||| || |||||||| || Sbjct: 817 caggacaaggagggcatccccccggaccagcagcggctcatcttcgccggcaagcagctc 876 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || || || || || || |||||||||||||| |||||||||||||| ||||||| | Sbjct: 877 gaggacggtcgcaccctcgccgactacaacatccagaaggagtccaccctccacctggtg 936 Query: 196 ctccgncttc 205 || || |||| Sbjct: 937 ctgcgtcttc 946 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/145 (82%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| || ||| |||| |||||||| || ||||||||||| | | | Sbjct: 727 atgcagatctttgtgaagactctgacggggaagaccatcactttggaggtggagtcctcg 786 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 787 gacaccatcgacaatgtgaaggccaagatccaggacaa-ggagggcatccccccggacca 845 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||| ||||| Sbjct: 846 gcagc-ggctcatcttcgccggcaa 869
>emb|AJ437537.2|OSA437537 Oryza sativa partial mRNA for polyubiquitin-like protein (ub1 gene) Length = 660 Score = 167 bits (84), Expect = 3e-38 Identities = 239/298 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||| ||||| |||||||| ||||| ||||| || | ||||| ||| Sbjct: 257 ggcaagaccattaccctggaggtcgagtcctccgacacgatcgataatgtgaaggccaag 316 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || | || |||||||||||||||||||||||||| ||||| Sbjct: 317 atccaggacaaggagggaatcccaccagaccagcagcgtctcatctttgctgggaagcag 376 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| Sbjct: 377 ctcgaggatggccgcacccttgcagactacaacatccaaaaggaatccaccctgcacctt 436 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | || || || | ||||||||||||||||| ||||| | |||||||| || Sbjct: 437 gtcctgcgcctccggggcggtatgcagatctttgtgaagacccttactggcaagacgatc 496 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || |||||||| || | | ||||| ||| ||| || ||||| ||||||||||||| Sbjct: 497 accttggaggttgagtcctctgacacgatcgacaatgtgaaggccaagatccaggaca 554 Score = 125 bits (63), Expect = 1e-25 Identities = 147/174 (84%), Gaps = 2/174 (1%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||| | ||||| |||||||||||||| |||||||| | ||||| ||| Sbjct: 485 ggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggccaag 544 Query: 73 atccangacaaggagggcattnccccggaccagc-agcgtctcatctttgctggcaagca 131 ||||| ||||||||||| ||| | || ||||||| |||| || ||||| ||||||||||| Sbjct: 545 atccaggacaaggagggtatt-caccagaccagcaagcgcctnatcttcgctggcaagca 603 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 ||||| ||||| || || ||||| || |||||||| || |||||||||||||| Sbjct: 604 gcttgaggatggtcgcacccttgcagattacaacattcagaaggagtccaccct 657 Score = 121 bits (61), Expect = 2e-24 Identities = 148/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||||||| || || || ||||| | ||||| ||| Sbjct: 29 ggcaagaccatcaccttggaggttgagtcctccgatacgattgacaatgtgaaggctaag 88 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||||||||| | ||||||||||| || || ||||| ||||||||||| Sbjct: 89 attcaggacaaggagggcatccctccggaccagcaacgccttatcttcgctggcaagcag 148 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| ||||| ||||| || || || || |||||||| |||||||||||| | ||||| Sbjct: 149 cttgaggatgggcgtactctcgcggattataacatccagaaggagtccaccttgcacct 207 Score = 46.1 bits (23), Expect = 0.081 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 321 tccctncggaccagcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| |||||||||| | |||| |||||||||||||| || |||||||||| Sbjct: 108 tccctccggaccagcaac-gccttatcttcgctggcaagcagcttgaggatgg 159
>ref|NM_183832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 165 bits (83), Expect = 1e-37 Identities = 170/200 (85%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 17 agaccctgacgggg-aagacgatcacgctggaggtggagtcctcggacaccatcgacaac 75 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| ||||||||||| || | || ||||||||||| |||||||| Sbjct: 76 gtgaaggcgaagatccaggacaaggaggggatcccgcccgaccagcagcggctcatcttc 135 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || || || || || || |||||||||||||| |||||||| Sbjct: 136 gccggcaagcagctggaggacgggcgcaccctcgccgactacaacatccagaaggagtcg 195 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 196 accctccacctggtgctccg 215 Score = 87.7 bits (44), Expect = 2e-14 Identities = 82/97 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| ||||| || || |||||||||| | | | Sbjct: 1 atgcagatcttcgtgaagaccctgacggggaagacgatcacgctggaggtggagtcctcg 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 61 gacaccatcgacaacgtgaaggcgaagatccaggaca 97
>gb|BC060312.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:72686 IMAGE:6919609), complete cds Length = 1199 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 575 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 633 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 634 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 693 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 694 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 753 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 754 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 813 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 814 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 873 Query: 301 atccagga 308 |||||||| Sbjct: 874 atccagga 881 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 119 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 177 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 178 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 237 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| || ||||| Sbjct: 238 gccggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtca 297 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 298 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 357 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 358 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 417 Query: 301 atccagga 308 |||||||| Sbjct: 418 atccagga 425 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 803 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 861 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 862 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 921 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 922 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 981 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 982 accctgcacctgg 994 Score = 141 bits (71), Expect = 2e-30 Identities = 244/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 347 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 405 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 406 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 465 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 466 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 525 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | ||||| || ||||||||||| ||||| |||||| | Sbjct: 526 accctgcaccttgtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 585 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 586 ggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaaggccaag 645 Query: 301 atccagga 308 |||||||| Sbjct: 646 atccagga 653 Score = 44.1 bits (22), Expect = 0.32 Identities = 75/95 (78%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||| ||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 103 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 162 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 163 gacaccatcgagaacgtgaaggccaagatccagga 197
>gb|BC114001.1| Bos taurus polyubiquitin, mRNA (cDNA clone MGC:133799 IMAGE:8064312), complete cds Length = 1093 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 492 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 550 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 551 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 610 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 611 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 670 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 671 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 730 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||| ||||| | ||||||||| | | ||| ||||| ||| Sbjct: 731 ggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaaggccaag 790 Query: 301 atccagga 308 |||||||| Sbjct: 791 atccagga 798 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || || |||||| || |||||||||||| ||| Sbjct: 264 agaccctgaccgg-caagaccatcacactggaagtggagcccagtgacaccatcgagaac 322 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || |||||||||||| |||| ||||||||| | ||||||||| Sbjct: 323 gtgaaggccaagatccaggataaggagggcattccccccgaccagcagaggctcatcttt 382 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 383 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 442 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 443 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 502 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 503 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 562 Query: 301 atccagga 308 |||||||| Sbjct: 563 atccagga 570 Score = 163 bits (82), Expect = 5e-37 Identities = 237/296 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| ||||| ||| Sbjct: 47 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 106 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 107 atccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcag 166 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||| ||||||||||| || ||||| ||||| |||||| Sbjct: 167 ctggaagatggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctg 226 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || |||||||| || ||||| |||||| | ||||||||||| Sbjct: 227 gtcctccgtctgaggggtggtatgcagattttcgtgaagaccctgaccggcaagaccatc 286 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccagga 308 ||| |||| ||||| | ||||||||| | | ||| ||||| ||||||||||| Sbjct: 287 acactggaagtggagcccagtgacaccatcgagaacgtgaaggccaagatccagga 342 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 720 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 778 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 779 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 838 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 839 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 898 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 899 accctgcacctgg 911 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 20 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 79 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 80 gacaccatcgagaacgtgaaggccaagatccagga 114
>gb|AF386524.1|AF386524 Pyrus communis ubiquitin extension protein (UBI) mRNA, complete cds Length = 651 Score = 165 bits (83), Expect = 1e-37 Identities = 158/185 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| ||||| ||||| |||||||| || ||||| ||||| | |||||| |||||| Sbjct: 36 aagaccataaccctagaggtcgagtcctccgataccattgacaatgtcaaggccaagatc 95 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||||||||||||||| |||||||| || |||||||| || Sbjct: 96 caagacaaggagggcatccccccggaccagcagcgcctcatcttcgccggcaagcagctc 155 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || ||||| || || || |||||||||||||| ||||||||||| || ||||||| | Sbjct: 156 gaggacggccgaaccctcgccgactacaacatccagaaggagtccactctccacctggtg 215 Query: 196 ctccg 200 ||||| Sbjct: 216 ctccg 220 Score = 40.1 bits (20), Expect = 5.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 327 cggaccagcagcagcctcatcttcgctggcaa 358 |||||||||||| ||||||||||||| ||||| Sbjct: 118 cggaccagcagc-gcctcatcttcgccggcaa 148 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| |||| |||||||| Sbjct: 6 atgcagatcttcgtgaaaaccctaacgggtaagaccat 43
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 165 bits (83), Expect = 1e-37 Identities = 170/200 (85%), Gaps = 1/200 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 12629162 agaccctgacgggg-aagacgatcacgctggaggtggagtcctcggacaccatcgacaac 12629104 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| ||||||||||| || | || ||||||||||| |||||||| Sbjct: 12629103 gtgaaggcgaagatccaggacaaggaggggatcccgcccgaccagcagcggctcatcttc 12629044 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || || || || || || |||||||||||||| |||||||| Sbjct: 12629043 gccggcaagcagctggaggacgggcgcaccctcgccgactacaacatccagaaggagtcg 12628984 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 12628983 accctccacctggtgctccg 12628964 Score = 109 bits (55), Expect = 6e-21 Identities = 163/200 (81%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||||||||| || ||||||||| | ||||| ||| | ||| Sbjct: 25760894 agaccctgacgggg-aagaccatcacgctggaggtggagagcagcgacacgatccagaac 25760952 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||| | || ||||||||||| || | |||||||||||||| |||||||| Sbjct: 25760953 gtcaaggcgaaggtgcaggacaaggaggggatcccgccggaccagcagcggctcatcttc 25761012 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || || || || || || |||||||||||||| |||||||| Sbjct: 25761013 gccggcaagcagctggaggacgggcgcacgctggccgactacaacatccagaaggagtcg 25761072 Query: 181 accctncacctggagctccg 200 || || ||||||| |||||| Sbjct: 25761073 acgctgcacctggtgctccg 25761092 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/148 (81%) Strand = Plus / Plus Query: 53 tcgacaacgacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtc 112 |||| |||| |||||||| |||||| |||| ||||||| | | ||| |||||||||| | Sbjct: 25765367 tcgagaacgtcaaggcgaggatccacgacagggagggcgtcccgccgcaccagcagcggc 25765426 Query: 113 tcatctttgctggcaagcancttgangatggccgtacacttgctgactacaacatccana 172 ||||||| || |||||||| || || || ||||| || || || |||||||||||||| | Sbjct: 25765427 tcatcttcgccggcaagcagctggaggacggccgcacgctggccgactacaacatccaga 25765486 Query: 173 aggagtccaccctncacctggagctccg 200 ||||||| || || ||||| | |||||| Sbjct: 25765487 aggagtcgacgctgcacctcgtgctccg 25765514 Score = 87.7 bits (44), Expect = 2e-14 Identities = 82/97 (84%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| ||||| || || |||||||||| | | | Sbjct: 12629178 atgcagatcttcgtgaagaccctgacggggaagacgatcacgctggaggtggagtcctcg 12629119 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 12629118 gacaccatcgacaacgtgaaggcgaagatccaggaca 12629082 Score = 63.9 bits (32), Expect = 3e-07 Identities = 116/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| |||||||| || |||||||||| | Sbjct: 25760878 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagagcagc 25760937 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||| ||||| | ||| ||||||||| | ||||||| ||| || |||| ||||||| Sbjct: 25760938 gacacgatccagaacgtcaaggcgaaggtgcaggacaa-ggaggggatcccgccggacca 25760996 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||| ||||| Sbjct: 25760997 gcagc-ggctcatcttcgccggcaa 25761020
>ref|NM_174133.2| Bos taurus polyubiquitin (LOC281370), mRNA Length = 1144 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 559 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 617 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 618 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 677 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 678 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 737 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 738 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 797 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||| ||||| | ||||||||| | | ||| ||||| ||| Sbjct: 798 ggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaaggccaag 857 Query: 301 atccagga 308 |||||||| Sbjct: 858 atccagga 865 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 331 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 389 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || |||||||||||| |||| ||||||||| | ||||||||| Sbjct: 390 gtgaaggccaagatccaggataaggagggcattccccccgaccagcagaggctcatcttt 449 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| ||| ||||||||||| || ||||| Sbjct: 450 gccggcaagcagctggaagatggccgcactctttttgattacaacatccagaaagagtcg 509 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 510 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 569 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 570 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 629 Query: 301 atccagga 308 |||||||| Sbjct: 630 atccagga 637 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| ||||| ||| Sbjct: 114 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 173 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 174 atccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcag 233 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||| ||||||||||| || ||||| ||||| |||||| Sbjct: 234 ctggaagatggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctg 293 Query: 193 g 193 | Sbjct: 294 g 294 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 787 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 845 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 846 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 905 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 906 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 965 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 966 accctgcacctgg 978 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 87 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 146 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 147 gacaccatcgagaacgtgaaggccaagatccagga 181
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 165 bits (83), Expect = 1e-37 Identities = 170/200 (85%), Gaps = 1/200 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 140772 agaccctgacgggg-aagacgatcacgctggaggtggagtcctcggacaccatcgacaac 140714 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| ||||||||||| || | || ||||||||||| |||||||| Sbjct: 140713 gtgaaggcgaagatccaggacaaggaggggatcccgcccgaccagcagcggctcatcttc 140654 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || || || || || || |||||||||||||| |||||||| Sbjct: 140653 gccggcaagcagctggaggacgggcgcaccctcgccgactacaacatccagaaggagtcg 140594 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 140593 accctccacctggtgctccg 140574 Score = 87.7 bits (44), Expect = 2e-14 Identities = 82/97 (84%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| ||||| || || |||||||||| | | | Sbjct: 140788 atgcagatcttcgtgaagaccctgacggggaagacgatcacgctggaggtggagtcctcg 140729 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 140728 gacaccatcgacaacgtgaaggcgaagatccaggaca 140692
>dbj|AK061988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B08, full insert sequence Length = 794 Score = 165 bits (83), Expect = 1e-37 Identities = 170/200 (85%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 119 agaccctgacgggg-aagacgatcacgctggaggtggagtcctcggacaccatcgacaac 177 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| ||||||||||| || | || ||||||||||| |||||||| Sbjct: 178 gtgaaggcgaagatccaggacaaggaggggatcccgcccgaccagcagcggctcatcttc 237 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || || || || || || |||||||||||||| |||||||| Sbjct: 238 gccggcaagcagctggaggacgggcgcaccctcgccgactacaacatccagaaggagtcg 297 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 298 accctccacctggtgctccg 317 Score = 87.7 bits (44), Expect = 2e-14 Identities = 82/97 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| ||||| || || |||||||||| | | | Sbjct: 103 atgcagatcttcgtgaagaccctgacggggaagacgatcacgctggaggtggagtcctcg 162 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 163 gacaccatcgacaacgtgaaggcgaagatccaggaca 199
>dbj|AK059242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F10, full insert sequence Length = 1517 Score = 165 bits (83), Expect = 1e-37 Identities = 170/200 (85%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| ||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 119 agaccctgacgggg-aagacgatcacgctggaggtggagtcctcggacaccatcgacaac 177 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||||||||||| ||||||||||| || | || ||||||||||| |||||||| Sbjct: 178 gtgaaggcgaagatccaggacaaggaggggatcccgcccgaccagcagcggctcatcttc 237 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || || || || || || |||||||||||||| |||||||| Sbjct: 238 gccggcaagcagctggaggacgggcgcaccctcgccgactacaacatccagaaggagtcg 297 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 298 accctccacctggtgctccg 317 Score = 87.7 bits (44), Expect = 2e-14 Identities = 82/97 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| ||||| || || |||||||||| | | | Sbjct: 103 atgcagatcttcgtgaagaccctgacggggaagacgatcacgctggaggtggagtcctcg 162 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||||||||||||||||| Sbjct: 163 gacaccatcgacaacgtgaaggcgaagatccaggaca 199
>dbj|AB099044.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS12767 Length = 534 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 40 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 98 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 99 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 158 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 159 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 218 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 219 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 278 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||| ||||| | ||||||||| | | ||| ||||| ||| Sbjct: 279 ggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaaggccaag 338 Query: 301 atccagga 308 |||||||| Sbjct: 339 atccagga 346 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 268 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 326 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 327 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 386 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 387 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 446 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 447 accctgcacctgg 459 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 24 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 83 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 84 gacaccatcgagaacgtgaaggccaagatccagga 118
>ref|NM_138895.1| Rattus norvegicus polyubiquitin (Ubb), mRNA Length = 1115 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 536 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 594 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 595 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 654 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 655 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 714 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 715 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 774 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 775 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 834 Query: 301 atccagga 308 |||||||| Sbjct: 835 atccagga 842 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 80 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 138 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 139 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 198 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| || ||||| Sbjct: 199 gccggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtca 258 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 259 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 318 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 319 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 378 Query: 301 atccagga 308 |||||||| Sbjct: 379 atccagga 386 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 764 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 822 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 823 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 882 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 883 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 942 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 943 accctgcacctgg 955 Score = 141 bits (71), Expect = 2e-30 Identities = 244/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 308 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 366 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 367 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 426 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 427 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 486 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | ||||| || ||||||||||| ||||| |||||| | Sbjct: 487 accctgcaccttgtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 546 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 547 ggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaaggccaag 606 Query: 301 atccagga 308 |||||||| Sbjct: 607 atccagga 614 Score = 44.1 bits (22), Expect = 0.32 Identities = 75/95 (78%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||| ||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 64 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 123 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 124 gacaccatcgagaacgtgaaggccaagatccagga 158
>dbj|D16554.1|RATPOLYU Rattus norvegicus mRNA for polyubiquitin, complete cds, four repetitive ubiquitins in tandem Length = 1115 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 536 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 594 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 595 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 654 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 655 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 714 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 715 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 774 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 775 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 834 Query: 301 atccagga 308 |||||||| Sbjct: 835 atccagga 842 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 80 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 138 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 139 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 198 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| || ||||| Sbjct: 199 gccggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtca 258 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 259 accctgcacctggtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 318 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 319 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 378 Query: 301 atccagga 308 |||||||| Sbjct: 379 atccagga 386 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 764 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 822 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 823 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 882 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 883 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 942 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 943 accctgcacctgg 955 Score = 141 bits (71), Expect = 2e-30 Identities = 244/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 308 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 366 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | ||||||||| Sbjct: 367 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctcatcttt 426 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 427 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 486 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||| | ||||| || ||||||||||| ||||| |||||| | Sbjct: 487 accctgcaccttgtcctccgcctgaggggcggcatgcagatcttcgtgaagaccctgacc 546 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 547 ggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaaggccaag 606 Query: 301 atccagga 308 |||||||| Sbjct: 607 atccagga 614 Score = 44.1 bits (22), Expect = 0.32 Identities = 75/95 (78%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||| ||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 64 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 123 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 124 gacaccatcgagaacgtgaaggccaagatccagga 158
>emb|Z18245.1|BTPOLYUB Bos taurus gene for polyubiquitin Length = 1144 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 559 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 617 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 618 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 677 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 678 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 737 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 738 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 797 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||| ||||| | ||||||||| | | ||| ||||| ||| Sbjct: 798 ggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaaggccaag 857 Query: 301 atccagga 308 |||||||| Sbjct: 858 atccagga 865 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 331 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 389 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || |||||||||||| |||| ||||||||| | ||||||||| Sbjct: 390 gtgaaggccaagatccaggataaggagggcattccccccgaccagcagaggctcatcttt 449 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| ||| ||||||||||| || ||||| Sbjct: 450 gccggcaagcagctggaagatggccgcactctttttgattacaacatccagaaagagtcg 509 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 510 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 569 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 570 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 629 Query: 301 atccagga 308 |||||||| Sbjct: 630 atccagga 637 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| ||||| ||| Sbjct: 114 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 173 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 174 atccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcag 233 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||| ||||||||||| || ||||| ||||| |||||| Sbjct: 234 ctggaagatggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctg 293 Query: 193 g 193 | Sbjct: 294 g 294 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 787 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 845 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 846 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 905 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 906 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 965 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 966 accctgcacctgg 978 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 87 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 146 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 147 gacaccatcgagaacgtgaaggccaagatccagga 181
>gb|M62429.1|BOVPOUBA Bovine polyubiquitin mRNA, 3' end, clone rpub2 Length = 636 Score = 165 bits (83), Expect = 1e-37 Identities = 247/308 (80%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 51 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 109 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 110 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 169 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 170 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 229 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 230 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 289 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||| ||||| | ||||||||| | | ||| ||||| ||| Sbjct: 290 ggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaaggccaag 349 Query: 301 atccagga 308 |||||||| Sbjct: 350 atccagga 357 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 279 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 337 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 338 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 397 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 398 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 457 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 458 accctgcacctgg 470 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 35 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 94 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 95 gacaccatcgagaacgtgaaggccaagatccagga 129
>gb|AY957885.1| Gracilaria lemaneiformis polyubiquitin (UBQ2) mRNA, complete cds Length = 1519 Score = 163 bits (82), Expect = 5e-37 Identities = 160/188 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| || || || || ||||||||||| ||||||||||| || | |||| | ||| Sbjct: 122 ggcaagactattactctcgaagtggagtcctccgacaccatcgagaatgtcaagaccaag 181 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || ||| ||||||||||||| ||||| ||||| ||||||||||| Sbjct: 182 atccaggacaaggaaggtattcccccggaccagcaacgtcttatcttcgctggcaagcag 241 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || |||||||| ||| |||||||||||||||| |||||||||||||| ||||| Sbjct: 242 ctcgaagacggccgtactctttctgactacaacatccagaaggagtccaccctgcacctt 301 Query: 193 gagctccg 200 | |||||| Sbjct: 302 gtgctccg 309 Score = 115 bits (58), Expect = 1e-22 Identities = 134/161 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| ||||| || |||||||| ||||| ||||| |||| ||| | ||||| Sbjct: 581 aagaccatcactcttgaagttgagtcctccgacactatcgagaacgtgaagactaagatt 640 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || ||||| ||||| ||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 641 caggataaggaaggcatccccccggaccagcagcgtctcatcttcgctggtaagcaactt 700 Query: 136 gangatggccgtacacttgctgactacaacatccanaagga 176 || || || || || || |||||||||||||||| ||||| Sbjct: 701 gaggacggtcgcaccctgtctgactacaacatccaaaagga 741 Score = 109 bits (55), Expect = 6e-21 Identities = 151/185 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| ||||| || |||||||| ||||| ||||| |||| ||| | || || Sbjct: 353 aagaccatcactcttgaagttgagtcctccgacactatcgagaacgttaagaccaaaatt 412 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| ||||||||||||| || ||||| || ||||||||||| || Sbjct: 413 caggacaaggaaggtattcccccggaccagcaacgactcattttcgctggcaagcagctc 472 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || || || || ||| | |||||||| ||||| |||||||||||||| ||||| | | Sbjct: 473 gaagacggtcgcactctttccgactacaatatccagaaggagtccaccctgcaccttgtg 532 Query: 196 ctccg 200 ||||| Sbjct: 533 ctccg 537 Score = 95.6 bits (48), Expect = 1e-16 Identities = 136/167 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| || ||||| || || |||||||| |||||||| |||| ||| | ||||| Sbjct: 809 aagaccattactcttgaagtcgaatcctctgataccatcgagaacgtgaagactaagatt 868 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || || ||||||| ||||| ||||| ||||| ||||| ||||| || Sbjct: 869 caagacaaggaaggtatccccccggatcagcaacgtcttatcttcgctggaaagcaactc 928 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || |||||||| || ||| ||||||||||||| || ||||| ||||| Sbjct: 929 gaggatggccgcaccctttctgactacaacattcagaaggaatccac 975 Score = 89.7 bits (45), Expect = 6e-15 Identities = 133/164 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| || ||||||||||| ||||| ||||| || || |||| |||| | ||||| Sbjct: 1265 aagaccattactcttgaggtggaatcctccgacactattgagaacgtcaagactaagatt 1324 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || ||||| ||||| ||||||||||||||||||||||||| || || ||||| || Sbjct: 1325 caggataaggaaggcatccccccggaccagcagcgtctcatcttcgccggtaagcagctc 1384 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || || || || || ||| | || ||||||||||| || ||||| Sbjct: 1385 gaggacggtcgcactctttccgattacaacatccagaaagagtc 1428 Score = 65.9 bits (33), Expect = 9e-08 Identities = 99/122 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| ||||||||||| ||||| ||||| || ||||| || || | ||| | || || Sbjct: 1037 aagacgatcacccttgaagtggaatcctcggataccattgagaatgtgaagactaaaatt 1096 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 1097 caggacaaggaaggtattcctccggaccagcaacgtctcatcttcgctggtaagcagctt 1156 Query: 136 ga 137 || Sbjct: 1157 ga 1158
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 6758 agaccctgacagg-caagaccatcaccctggaggttgagcccagtgacaccatcgagaat 6816 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 6817 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 6876 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 6877 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 6936 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 6937 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 6996 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 6997 ggcaagaccatcaccctggaggt 7019 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 6986 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 7044 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 7045 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 7104 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 7105 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 7164 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || |||||||||||||| || |||||| | Sbjct: 7165 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtaaagaccctgaca 7224 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 7225 ggcaagaccatcaccctggaggt 7247 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 6530 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 6588 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 6589 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 6648 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| |||||||| Sbjct: 6649 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtct 6708 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 6709 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 6768 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 6769 ggcaagaccatcaccctggaggt 6791 Score = 153 bits (77), Expect = 5e-34 Identities = 203/251 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || |||||||||||| || | |||||| ||| Sbjct: 7453 ggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggcaaag 7512 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||| | | |||||||| |||||||| Sbjct: 7513 atccaggacaaggagggcatcccccctgaccagcagaggttgatctttgccggcaagcag 7572 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || | |||||||||||||| |||||||||||||| |||||| Sbjct: 7573 ctggaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctgcacctg 7632 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || |||||||||||||| || |||||| | ||||||||||| Sbjct: 7633 gtcctccgcctcaggggtgggatgcagatctttgtaaagaccctgacaggcaagaccata 7692 Query: 253 acattggaggt 263 || ||||||| Sbjct: 7693 accctggaggt 7703 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 7214 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 7272 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 7273 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 7332 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 7333 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 7392 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 7393 accctgcacctgg 7405 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 6074 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 6132 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 6133 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 6192 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| |||||||| Sbjct: 6193 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtct 6252 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 6253 accctgcacctgg 6265 Score = 147 bits (74), Expect = 3e-32 Identities = 212/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| || ||||||||||| ||||| ||| || |||||||||||| || Sbjct: 6302 agaccctgacagggaaa-accatcaccctggaggtcgagcccagtgacaccatcgagaat 6360 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 6361 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 6420 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| |||||||| Sbjct: 6421 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtct 6480 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 6481 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 6540 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 6541 ggcaagaccatcaccctggaggt 6563 Score = 139 bits (70), Expect = 7e-30 Identities = 211/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||| ||||| ||| || |||||||||||| || Sbjct: 7670 agaccctgacagg-caagaccataaccctggaggtcgagcccagtgacaccatcgagaat 7728 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||| ||||||| |||| ||||||||| | | |||||| Sbjct: 7729 gtcaaggcaaagatccaggacaagcagggcatcccccctgaccagcagaggttgatcttt 7788 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| |||||||| Sbjct: 7789 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtct 7848 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 7849 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 7908 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 7909 ggcaagaccatcaccctggaggt 7931 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 7426 atgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 7475 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 6058 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 6107
>gb|AF502576.1| Musa acuminata ubiquitin (UBQ2) gene, complete cds Length = 1602 Score = 163 bits (82), Expect = 5e-37 Identities = 151/176 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||||||||| || ||||||||||| |||||||| | ||| || |||||| Sbjct: 31 aagacgatcacccttgaggttgaatcctctgacacaatcgacaatgtcaaagccaagatc 90 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||| || ||||||||||||| | | || |||||||||||||| ||| Sbjct: 91 caggataaggagggaatacccccggaccagcaaaggttgatatttgctggcaagcaactt 150 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || |||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 151 gaggatggccgcacccttgctgactacaacatccaaaaggagtccaccctccacct 206 Score = 149 bits (75), Expect = 7e-33 Identities = 156/185 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| ||||||||||| ||| ||| |||||||| ||||| | |||||| |||||| Sbjct: 943 aagaccattacccttgaggttgagagctcggacaccatagacaatgtcaaggccaagatc 1002 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||||||| ||||||| || || | |||||||| ||||||||||| || Sbjct: 1003 caggacaaggagggcattcccccggatcaacaaaggctcatcttcgctggcaagcagctc 1062 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||||||||| | || |||||||| ||||| |||||||||||||| ||||| | | Sbjct: 1063 gaggatggccgtaccttggccgactacaatatccagaaggagtccaccctccaccttgtg 1122 Query: 196 ctccg 200 ||||| Sbjct: 1123 ctccg 1127 Score = 149 bits (75), Expect = 7e-33 Identities = 156/185 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||||||||| || |||||||||||||| ||||| | |||||| |||||| Sbjct: 259 aagaccatcacccttgaggttgaatcctctgacaccattgacaatgtcaaggccaagatc 318 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| ||||||| ||||| | |||||||| |||||||| || || Sbjct: 319 caggacaaggaaggcattcccccggatcagcaaaggctcatcttcgctggcaaacagctc 378 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || |||||||| || | || |||||||| ||||| |||||||| ||||| ||||| | | Sbjct: 379 gaggatggccgcaccttggccgactacaatatccagaaggagtcgaccctccaccttgtg 438 Query: 196 ctccg 200 ||||| Sbjct: 439 ctccg 443 Score = 141 bits (71), Expect = 2e-30 Identities = 155/185 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| ||||||||||| ||| ||| |||||||| ||||| | |||||| |||||| Sbjct: 487 aagaccattacccttgaggttgagagctcggacaccatagacaatgtcaaggccaagatc 546 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| |||| || ||||| | |||||||| ||||||||||| || Sbjct: 547 caggacaaggaaggcattcccccagatcagcaaaggctcatcttcgctggcaagcagctc 606 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||||||||| | || |||||||| ||||| |||||||||||||| ||||| | | Sbjct: 607 gaggatggccgtaccttggccgactacaatatccagaaggagtccaccctccaccttgtg 666 Query: 196 ctccg 200 ||||| Sbjct: 667 ctccg 671 Score = 109 bits (55), Expect = 6e-21 Identities = 151/185 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| || ||||| ||| ||| |||||||| ||||| | |||||| |||||| Sbjct: 715 aagaccatcactctggaggttgagagctcggacaccatagacaatgtcaaggccaagatc 774 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| |||| || ||||| | |||||||| ||||||||||| | Sbjct: 775 caggacaaggaaggcattcccccagatcagcaaaggctcatcttcgctggcaagcaattg 834 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||||||||| | |||||||| || ||||| ||||| || ||||| ||| ||| | Sbjct: 835 gaggatggccgtaccttggctgactataatatccagaaggaatctaccctccacttggtg 894 Query: 196 ctccg 200 ||||| Sbjct: 895 ctccg 899 Score = 103 bits (52), Expect = 4e-19 Identities = 142/174 (81%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| || ||||| ||| ||| |||||||| ||||| | |||||| |||||| Sbjct: 1171 aagaccatcactctggaggttgagagctcggacaccatagacaatgtcaaggccaagatc 1230 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| |||| || ||||| | |||||||| ||||||||||| | Sbjct: 1231 caggacaaggaaggcattcccccagatcagcaaaggctcatcttcgctggcaagcaattg 1290 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | |||||||| || ||||| ||||| || ||||| ||| Sbjct: 1291 gaggatggccgtaccttggctgactataatatccagaaggaatctaccctccac 1344 Score = 79.8 bits (40), Expect = 6e-12 Identities = 142/178 (79%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| || ||||| ||| ||| ||||| |||||||| | ||||| ||||| Sbjct: 1399 aagaccatcactctggaggttgagagctcggacactatcgacaatgtgaaggcaaagata 1458 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| || | || ||||| ||| | || |||||||| || ||||| || Sbjct: 1459 caggacaaggagggaatcccaccagaccaacagaggctgatctttgcgggtaagcagctc 1518 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || ||||| || ||||| || ||||| |||||||| ||||| ||||| || ||||||| Sbjct: 1519 gaggatgggcgcacactggcagactataacatccagaaggaatccactcttcacctgg 1576 Score = 42.1 bits (21), Expect = 1.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 ctcatcttcgctggcaancattttgaggatgg 373 ||||||||||||||||| || || |||||||| Sbjct: 1267 ctcatcttcgctggcaagcaattggaggatgg 1298 Score = 42.1 bits (21), Expect = 1.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 ctcatcttcgctggcaancattttgaggatgg 373 ||||||||||||||||| || || |||||||| Sbjct: 811 ctcatcttcgctggcaagcaattggaggatgg 842
>dbj|AB003732.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 3273 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 2350 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 2408 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 2409 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2468 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2469 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 2528 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2529 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 2588 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 2589 ggcaagaccatcaccctggaggt 2611 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 2122 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 2180 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 2181 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2240 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2241 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 2300 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2301 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 2360 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 2361 ggcaagaccatcaccctggaggt 2383 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1894 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1952 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1953 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2012 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2013 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 2072 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2073 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 2132 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 2133 ggcaagaccatcaccctggaggt 2155 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1210 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1268 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1269 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1328 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1329 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 1388 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1389 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1448 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 1449 ggcaagaccatcaccctggaggt 1471 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 982 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1040 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1041 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1100 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1101 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 1160 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1161 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1220 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 1221 ggcaagaccatcaccctggaggt 1243 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 754 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 812 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 813 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 872 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 873 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 932 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 933 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 992 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 993 ggcaagaccatcaccctggaggt 1015 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 526 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 584 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 585 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 644 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 645 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 704 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 705 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 764 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 765 ggcaagaccatcaccctggaggt 787 Score = 163 bits (82), Expect = 5e-37 Identities = 214/263 (81%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| ||||||||||| ||||| ||| || |||||||||||| || Sbjct: 70 agaccctgacagg-caaaaccatcaccctggaggtcgagcccagtgacaccatcgagaat 128 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 129 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 188 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 189 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 248 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 249 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 308 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 309 ggcaagaccatcaccctggaggt 331 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 2578 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 2636 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 2637 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2696 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2697 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 2756 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2757 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 2816 Query: 241 ggcaagaccatnacattggaggt 263 ||||| ||||| || ||||||| Sbjct: 2817 ggcaaaaccatcaccctggaggt 2839 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1438 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1496 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1497 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1556 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1557 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtcc 1616 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1617 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1676 Query: 241 ggcaagaccatnacattggaggt 263 ||||| ||||| || ||||||| Sbjct: 1677 ggcaaaaccatcaccctggaggt 1699 Score = 155 bits (78), Expect = 1e-34 Identities = 213/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||||||||| || Sbjct: 298 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatcgagaat 356 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 357 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 416 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| |||||||| Sbjct: 417 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtct 476 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 477 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 536 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 537 ggcaagaccatcaccctggaggt 559 Score = 147 bits (74), Expect = 3e-32 Identities = 212/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| ||||||||||| ||||| ||| || |||||||||||| || Sbjct: 2806 agaccctgacagg-caaaaccatcaccctggaggtcgagcccagtgacaccatcgagaat 2864 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 2865 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 2924 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| |||||||| Sbjct: 2925 gccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtct 2984 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 2985 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 3044 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 3045 ggcaagaccatcaccctggaggt 3067 Score = 139 bits (70), Expect = 7e-30 Identities = 211/263 (80%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||| ||||||||||| ||||| ||| || |||||||||||| || Sbjct: 1666 agaccctgacagg-caaaaccatcaccctggaggtcgagcccagtgacaccatcgagaat 1724 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | | |||||| Sbjct: 1725 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatcttt 1784 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | ||||||||| |||| |||||||| Sbjct: 1785 gccggcaagcagctggaagatggccgcaccctgtccgactacaacgtccagaaggagtct 1844 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||||||||| |||||| | Sbjct: 1845 accctgcacctggtcctccgcctcaggggtgggatgcagatctttgtgaagaccctgaca 1904 Query: 241 ggcaagaccatnacattggaggt 263 ||||||||||| || ||||||| Sbjct: 1905 ggcaagaccatcaccctggaggt 1927 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/50 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||| ||||| || ||||||| Sbjct: 54 atgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggt 103
>gb|DQ216252.1| Taeniopygia guttata clone 0058P0005E02 ubiquitin C variant 12-like mRNA, complete sequence Length = 1378 Score = 161 bits (81), Expect = 2e-36 Identities = 248/310 (80%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgactgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| || ||||| Sbjct: 204 gctggcaagcagctggaggatgggcgcaccctctccgactacaacatccagaaagagtca 263 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||||| ||| || || ||||||||||||||||| |||||| | Sbjct: 264 actctccacctggtgctgcgcctcaggggtgggatgcagatctttgtgaagaccctgacc 323 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | || ||||| ||| Sbjct: 324 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgagaatgtcaaggccaag 383 Query: 301 atccaggaca 310 |||||||||| Sbjct: 384 atccaggaca 393 Score = 127 bits (64), Expect = 3e-26 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || |||||||||||| ||| Sbjct: 541 agaccctgaccgg-caagaccatcaccctggaagttgagcccagtgacaccatcgagaac 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| |||||| |||| ||||||||| | || |||||| Sbjct: 600 gtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| || || || | |||||||||||||| || ||||| Sbjct: 660 gctggtaagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtca 719 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 720 actctgcacctgg 732 Score = 127 bits (64), Expect = 3e-26 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || |||||||||||| || Sbjct: 313 agaccctgaccgg-caagaccatcacccttgaggtggagcccagtgacaccatcgagaat 371 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| || ||| | || ||| ||||| | || |||||| Sbjct: 372 gtcaaggccaagatccaggacaaggaaggtattcctcctgacaagcagaggctgatcttt 431 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| || || || | |||||||| ||||| ||||| ||| Sbjct: 432 gctggtaagcagctggaagatgggcgcaccctgtcagactacaatatccagaaggaatcc 491 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 492 accctgcacctgg 504 Score = 107 bits (54), Expect = 3e-20 Identities = 156/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||||||| || ||||||||| || || Sbjct: 769 agaccctgaccgg-caagaccatcactcttgaggtggagcccagtgacaccattgaaaat 827 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| | || ||||||||| | || || || Sbjct: 828 gtgaaggccaagatccaggacaaggaaggcattccaccagaccagcagaggctgattttc 887 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| ||||| | | |||||||||||||| ||||| ||| Sbjct: 888 gctggtaagcagctggaggatggtcgtactttgtccgactacaacatccagaaggaatcc 947 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 948 accctgcacct 958 Score = 95.6 bits (48), Expect = 1e-16 Identities = 156/193 (80%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || |||||||||||| || Sbjct: 997 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccatcgagaat 1055 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| || || | || ||||||||| | || || || Sbjct: 1056 gtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgattttc 1115 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| |||||||| Sbjct: 1116 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaggagtca 1175 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 1176 actctgcacctgg 1188 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccat 106 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 981 atgcagatcttcgtgaagaccctgactggcaagaccat 1018
>ref|XM_391117.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10941.1) partial mRNA Length = 465 Score = 161 bits (81), Expect = 2e-36 Identities = 161/190 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||||||||||||||| || |||||||| ||||||| |||| | |||||| Sbjct: 31 aagacgatcacccttgaggtggagtcttccgacaccattgacaacgtcaagtccaagatc 90 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| || |||||||||||||||| || ||||||||||| ||||| || Sbjct: 91 caggacaaggagggtatccccccggaccagcagcgacttatctttgctggtaagcagctc 150 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || |||||||| || || |||||||||||||| |||||||||||||| ||| ||| Sbjct: 151 gaggatggccgcaccctgagcgactacaacatccagaaggagtccacccttcacttggtc 210 Query: 196 ctccgncttc 205 ||||| |||| Sbjct: 211 ctccgccttc 220
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 161 bits (81), Expect = 2e-36 Identities = 153/179 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| || |||||| ||||||||||||||| |||| ||| |||| Sbjct: 242 ggcaagaccatcaccctggacgtggagagctctgacaccatcgagaacgtgaagcagaag 301 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||| |||||||| |||||||| || |||||||| Sbjct: 302 atccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccggcaagcag 361 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 362 ctcgaggacggccgcaccctggctgactacaacatccagaaggagtcaacccttcacct 420 Score = 161 bits (81), Expect = 2e-36 Identities = 153/179 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| || |||||| ||||||||||||||| |||| ||| |||| Sbjct: 8 ggcaagaccatcaccctggacgtggagagctctgacaccatcgagaacgtgaagcagaag 67 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||| |||||||| |||||||| || |||||||| Sbjct: 68 atccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccggcaagcag 127 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 128 ctcgaggacggccgcaccctggctgactacaacatccagaaggagtcgacccttcacct 186 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacg 61 ||||||||||||||||| || |||||| ||||||||| ||||| |||| Sbjct: 476 ggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacg 524 Score = 40.1 bits (20), Expect = 5.0 Identities = 113/145 (77%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| || || ||||| | ||||||||||| || |||| ||||| | Sbjct: 215 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggacgtggagagctct 274 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| | | ||| ||| |||||||||||||| ||| || |||| |||| || Sbjct: 275 gacaccatcgagaacgtgaagcagaagatccaggacaa-ggagggcatccccccggatca 333 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| ||||||||||||| ||||| Sbjct: 334 gcagc-gcctcatcttcgccggcaa 357
>gb|DQ216248.1| Taeniopygia guttata clone 0058P0029E05 ubiquitin C variant 8-like mRNA, complete sequence Length = 1378 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || | ||| || |||||||||||| ||| Sbjct: 541 agaccctgaccgg-caagaccatcaccctggaacttgagcccagtgacaccatcgagaac 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| |||||| |||| ||||||||| | || |||||| Sbjct: 600 gtcaaggccaagatccaggacaaggaaggcattccccccgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || |||||||| || || |||||||||||||||| ||||| ||| Sbjct: 660 gctggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggaatcc 719 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 720 accctgcacctgg 732 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgactgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| || ||||| Sbjct: 204 gctggcaagcagctggaggatgggcgcaccctctccgactacaacatccagaaagagtca 263 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 264 actctccacctgg 276 Score = 109 bits (55), Expect = 6e-21 Identities = 142/173 (82%) Strand = Plus / Plus Query: 21 catcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccanga 80 ||||||||||||||||||| || |||||||||||| || | |||||| |||||||| || Sbjct: 332 catcacccttgaggtggagcccagtgacaccatcgagaatgtcaaggccaagatccagga 391 Query: 81 caaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttganga 140 |||||| || ||| | || ||| ||||| | || ||||||||||| ||||| || || || Sbjct: 392 caaggaaggtattcctcctgacaagcagaggctgatctttgctggtaagcagctggaaga 451 Query: 141 tggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 ||| || || || | |||||||| ||||| ||||| |||||||| ||||||| Sbjct: 452 tgggcgcaccctgtcagactacaatatccagaaggaatccaccctgcacctgg 504 Score = 107 bits (54), Expect = 3e-20 Identities = 156/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| |||||||||||| || ||||||||| || || Sbjct: 769 agaccctgaccgg-caagaccatcactcttgaggtggagcccagtgacaccattgaaaat 827 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| | || ||||||||| | || || || Sbjct: 828 gtgaaggccaagatccaggacaaggaaggcattccaccagaccagcagaggctgattttc 887 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| ||||| | | |||||||||||||| ||||| ||| Sbjct: 888 gctggtaagcagctggaggatggtcgtactttgtccgactacaacatccagaaggaatcc 947 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 948 accctgcacct 958 Score = 95.6 bits (48), Expect = 1e-16 Identities = 156/193 (80%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || |||||||||||| || Sbjct: 997 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccatcgagaat 1055 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| || || | || ||||||||| | || || || Sbjct: 1056 gtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgattttc 1115 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| |||||||| Sbjct: 1116 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaggagtca 1175 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 1176 actctgcacctgg 1188 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccat 106 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 981 atgcagatcttcgtgaagaccctgactggcaagaccat 1018
>gb|BT017442.1| Zea mays clone EL01N0405B08.c mRNA sequence Length = 805 Score = 159 bits (80), Expect = 8e-36 Identities = 146/170 (85%) Strand = Plus / Plus Query: 31 gaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggc 90 |||||||||||||| |||||||||||||||| ||||| ||||| || |||||||||||| Sbjct: 136 gaggtggagtcctcggacaccatcgacaacgtgaaggccaagatacaggacaaggagggc 195 Query: 91 attnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtaca 150 || | |||||||||||||| || ||||| || |||||||| || || || ||||| || Sbjct: 196 atcccgccggaccagcagcggctaatcttcgccggcaagcagctcgaggacggccgcacc 255 Query: 151 cttgctgactacaacatccanaaggagtccaccctncacctggagctccg 200 || || |||||||||||||| |||||||||||||| ||||||| |||||| Sbjct: 256 ctcgccgactacaacatccagaaggagtccaccctccacctggtgctccg 305 Score = 71.9 bits (36), Expect = 1e-09 Identities = 80/97 (82%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| || || || || ||||||||||| | | | Sbjct: 91 atgcagatcttcgtgaagaccctgacggggaaaacgatcacgttggaggtggagtcctcg 150 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||| ||||||| Sbjct: 151 gacaccatcgacaacgtgaaggccaagatacaggaca 187
>ref|XM_415105.1| PREDICTED: Gallus gallus ubiquitin (LOC396190), mRNA Length = 1349 Score = 159 bits (80), Expect = 8e-36 Identities = 206/254 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || ||||||||| || |||| ||||| ||| Sbjct: 766 ggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaacgtgaaggccaag 825 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 826 atccaggacaaggagggcattccccccgatcagcagaggctgatctttgctggcaagcag 885 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || | |||||||||||||| |||||||||||||| |||||| Sbjct: 886 ctggaagatgggcgcactctgtccgactacaacatccagaaggagtccaccctgcacctg 945 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||||||||| ||| || | ||||||||||| Sbjct: 946 gtgctgcgcctcaggggagggatgcagatctttgtgaagaccttgactggcaagaccatc 1005 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1006 accctggaggtgga 1019 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || |||||||| || |||| ||||| ||| Sbjct: 994 ggcaagaccatcaccctggaggtggaacccagcgacaccattgagaacgtgaaggccaag 1053 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| || || ||| | || ||||||||||||||||| Sbjct: 1054 atccaggacaaggagggcattccccccgatcaacagaggctgatctttgctggcaagcag 1113 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| |||||||||||||| |||||| Sbjct: 1114 ctggaagatggacgcaccctgtctgactacaacatccagaaggagtccaccctgcacctg 1173 Query: 193 g 193 | Sbjct: 1174 g 1174 Score = 109 bits (55), Expect = 6e-21 Identities = 140/170 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | |||||||| || ||| |||||||| || | |||||| ||| Sbjct: 538 ggcaagaccatcaccttggaggtggaacccagtgataccatcgagaatgtcaaggccaag 597 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| || |||||| | || ||||| ||||||||||| Sbjct: 598 atccaggacaaggagggcattccccccgatcagcagaggctgatcttcgctggcaagcag 657 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || || || || || || | |||||||||||||| ||||||||||| Sbjct: 658 ctggaagacgggcgcaccctgtccgactacaacatccagaaggagtccac 707 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 511 atgcagatcttcgtgaagaccctcactggcaagaccatcaccttggaggtgga 563 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/50 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| ||| || | ||||||||||| || ||||||| Sbjct: 739 atgcagatctttgtgaagaccttgacaggcaagaccatcaccctggaggt 788
>ref|XM_755642.1| Ustilago maydis 521 hypothetical protein (UM04588.1) partial mRNA Length = 480 Score = 159 bits (80), Expect = 8e-36 Identities = 149/174 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| || ||||||||||| || |||||||||||||| | |||||| |||||| Sbjct: 31 aagaccatcactctcgaggtggagtcttcggacaccatcgacaatgtcaaggccaagatc 90 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||||||| | || |||||||||||||| ||||| ||||| ||||| || Sbjct: 91 caggacaaggagggcattccgcccgaccagcagcgtctgatcttcgctggtaagcagctc 150 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || || || ||||| ||| | |||||||||||||| |||||||| ||||| ||| Sbjct: 151 gaggacggacgtacgctttcggactacaacatccagaaggagtctaccctgcac 204 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||||||||| || ||||| |||| |||||||| || | |||||||| | | Sbjct: 1 atgcagatctttgtcaagaccctcacgggtaagaccatcactctcgaggtggagtcttcg 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||| ||||||||||||| Sbjct: 61 gacaccatcgacaatgtcaaggccaagatccaggaca 97
>gb|BC062397.1| Rattus norvegicus cDNA clone IMAGE:5623273, **** WARNING: chimeric clone **** Length = 3040 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2118 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 2176 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2177 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2236 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 2237 gcaggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggagtcc 2296 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2297 accctgcacctgg 2309 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1662 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1720 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1721 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1780 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 1781 gcaggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggagtcc 1840 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1841 accctgcacctgg 1853 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2574 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 2632 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2633 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2692 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2693 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2752 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2753 accctgcacctgg 2765 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2346 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 2404 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2405 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2464 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2465 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2524 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2525 accctgcacctgg 2537 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1434 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1492 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1493 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1552 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1553 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1612 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1613 accctgcacctgg 1625 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 294 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 352 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 353 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 412 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 413 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 472 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 473 accctgcacctgg 485 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1890 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1948 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1949 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2008 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2009 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2068 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 2069 accttgcacctgg 2081 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1206 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1264 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1265 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1324 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | || ||||||||||| ||||||||| Sbjct: 1325 gcaggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaaggagtcc 1384 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1385 accctgcacctgg 1397 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 978 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1036 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1037 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1096 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1097 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1156 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 1157 accttgcacctgg 1169 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 750 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 808 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 809 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 868 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 869 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 928 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 929 accttgcacctgg 941 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 522 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 580 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 581 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 640 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | || ||||||||||| ||||||||| Sbjct: 641 gcaggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaaggagtcc 700 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 701 accctgcacctgg 713 Score = 135 bits (68), Expect = 1e-28 Identities = 149/178 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||| || ||||||||| || || | |||||| |||||| Sbjct: 80 aagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggcaaagatc 139 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||| ||||||||| | || |||||||| |||||||| || Sbjct: 140 caggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctg 199 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || |||||||| || || | |||||||||||||| |||||||||||| | ||||||| Sbjct: 200 gaagatggccgcaccctgtcagactacaacatccagaaggagtccaccttgcacctgg 257 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2558 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2607 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2330 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2379 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2102 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2151 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1874 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1923 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1646 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1695 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1418 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1467 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1190 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1239 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 962 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1011 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 734 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 783 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 506 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 555 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 278 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 327 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 2786 atgcagatctttgtgaagaccctgacaggcaagaccat 2823
>ref|XM_505222.1| Yarrowia lipolytica CLIB122, YALI0F09790g predicted mRNA Length = 453 Score = 159 bits (80), Expect = 8e-36 Identities = 144/167 (86%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 31 aagactatcaccctcgaggtggagtcttccgacaccatcgacaacgtcaagtccaagatc 90 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||||||||||||||| || ||||| || || ||||| || Sbjct: 91 caggacaaggagggaattcccccggaccagcagcgacttatcttcgccggtaagcagctc 150 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || ||||| || ||| |||||||||||||||| ||||||||||| Sbjct: 151 gaggacggccgaaccctttctgactacaacatccagaaggagtccac 197
>emb|X60826.1|CRUBI3 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) Length = 730 Score = 159 bits (80), Expect = 8e-36 Identities = 152/178 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||||||||| || ||||||||||| || | ||||| ||||| Sbjct: 37 aagaccatcaccctggaggtggagtcttcggacaccatcgagaatgtgaaggccaagatt 96 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| | ||||||||||||||||| ||||| || |||||||| || Sbjct: 97 caggacaaggagggcatccctccggaccagcagcgtctgatcttcgccggcaagcagctg 156 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || || ||||| || || || |||||||||||||| |||||||||||||| ||||||| Sbjct: 157 gaggacggccgcaccctggcggactacaacatccagaaggagtccaccctccacctgg 214 Score = 48.1 bits (24), Expect = 0.020 Identities = 98/125 (78%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||| ||||| ||||| ||||| |||| |||||||| || |||||||||| | | Sbjct: 7 atgcaaatcttcgtgaagaccctcacgggtaagaccatcaccctggaggtggagtcttcg 66 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| | | || ||||| ||||| ||||||| || | || ||||| ||||||| Sbjct: 67 gacaccatcgagaatgtgaaggccaagattcaggacaagg-agggcatccctccggacca 125 Query: 334 gcagc 338 ||||| Sbjct: 126 gcagc 130
>emb|X15427.1|CRUBIRP Chlamydomonas reinhardtii UBI1-ribosomal protein fusion mRNA Length = 689 Score = 159 bits (80), Expect = 8e-36 Identities = 152/178 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||||||||| || ||||||||||| || | ||||| ||||| Sbjct: 39 aagaccatcaccctcgaggtggagtcttcggacaccatcgagaatgtgaaggccaagatt 98 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| | ||||||||||||||||| ||||| || |||||||| || Sbjct: 99 caggacaaggagggcatccctccggaccagcagcgtctgatcttcgccggcaagcagctg 158 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || || ||||| || || || |||||||||||||| |||||||||||||| ||||||| Sbjct: 159 gaggacggccgcaccctggcggactacaacatccagaaggagtccaccctccacctgg 216 Score = 40.1 bits (20), Expect = 5.0 Identities = 97/125 (77%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||| ||||| ||||| ||||| |||| |||||||| || | |||||||| | | Sbjct: 9 atgcaaatcttcgtgaagaccctcacgggtaagaccatcaccctcgaggtggagtcttcg 68 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| | | || ||||| ||||| ||||||| || | || ||||| ||||||| Sbjct: 69 gacaccatcgagaatgtgaaggccaagattcaggacaagg-agggcatccctccggacca 127 Query: 334 gcagc 338 ||||| Sbjct: 128 gcagc 132
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || ||||||||||| ||| Sbjct: 363 agaccctgaccgg-caagaccatcaccctggaggtggagcccagcgacaccatcgagaac 421 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||||||||| |||| ||||||||| | ||||||||| Sbjct: 422 gtcaaggccaagatccaggataaggagggcatcccccccgaccagcagaggctcatcttt 481 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || ||||| || || || |||||||||||||||| ||||||||| Sbjct: 482 gcaggcaagcagctggaggatgggcgcaccctgtctgactacaacatccagaaggagtcc 541 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 542 actctgcacctgg 554 Score = 157 bits (79), Expect = 3e-35 Identities = 246/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || ||||||||||| ||| Sbjct: 135 agaccctgaccgg-caagaccatcaccctggaggtggagcccagcgacaccatcgagaac 193 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||||||||| |||| ||||||||| | ||||||||| Sbjct: 194 gtcaaggccaagatccaggataaggagggcatcccccccgaccagcagaggctcatcttt 253 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| | || ||||||||||| || ||||| Sbjct: 254 gcaggcaagcagctggaagatggccgcactctttccgattacaacatccagaaagagtcg 313 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||| || || |||||||| || ||||| |||||| | Sbjct: 314 accctgcacctggtgctgcgcctgagaggcggtatgcagattttcgtgaagaccctgacc 373 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 374 ggcaagaccatcaccctggaggtggagcccagcgacaccatcgagaacgtcaaggccaag 433 Query: 301 atccagga 308 |||||||| Sbjct: 434 atccagga 441 Score = 149 bits (75), Expect = 7e-33 Identities = 168/200 (84%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || ||||||||||| || Sbjct: 819 agaccctgaccgg-caagaccatcaccctggaggtggagcccagcgacaccatcgagaat 877 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||||||||| |||| ||||||||| | ||||||||| Sbjct: 878 gtgaaggccaagatccaggataaggagggcatcccccccgaccagcagaggctcatcttt 937 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 938 gcaggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 997 Query: 181 accctncacctggagctccg 200 ||||| ||||||| |||||| Sbjct: 998 accctgcacctggtgctccg 1017 Score = 119 bits (60), Expect = 7e-24 Identities = 159/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||| ||||| ||||||||| || ||||||||||| || Sbjct: 591 agaccctgaccgg-caagaccattaccctggaggtggagcccagcgacaccatcgagaat 649 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||||||||| |||| ||||||||| | |||||||| Sbjct: 650 gtgaaggccaagatccaggataaggagggcatcccccccgaccagcagaggttcatcttt 709 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || ||||| || || || |||| ||||||||||| ||||||||| Sbjct: 710 gcaggcaagcagctggaggatgggcgcaccctgtctgattacaacatccagaaggagtcc 769 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 770 actctgcacctgg 782 Score = 67.9 bits (34), Expect = 2e-08 Identities = 78/95 (82%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 119 atgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 178 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 179 gacaccatcgagaacgtcaaggccaagatccagga 213 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 |||||||| || ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 803 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaggtgga 855 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 |||||||| || ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 575 atgcagattttcgtgaagaccctgaccggcaagaccattaccctggaggtgga 627
>gb|AF395864.1|AF395864 Branchiostoma belcheri ubiquitin mRNA, complete cds Length = 428 Score = 159 bits (80), Expect = 8e-36 Identities = 156/182 (85%), Gaps = 1/182 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||| ||| | |||||||| ||||| || Sbjct: 38 agaccctgacagg-caagaccatcacccttgaggtcgagccttctgacactatcgaaaat 96 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| | || |||||||||||||||||||| Sbjct: 97 gtgaaggccaagatccaagacaaggagggcatcccaccagaccagcagcgtctcatcttc 156 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 157 gccggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggagtcc 216 Query: 181 ac 182 || Sbjct: 217 ac 218 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 22 atgcagatcttcgtgaagaccctgacaggcaagaccat 59
>gb|AF323508.1|AF323508 Synthetic construct HPV type 6b humanized ubiquitin/L1 delta/H-2 Db CTL epitope hybrid protein gene, complete cds Length = 1677 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| |||||||||||||| ||||||||| |||| ||||||||||| ||| Sbjct: 17 agaccctgaccggg-aagaccatcaccctggaggtggagccctccgacaccatcgagaac 75 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| |||| ||||||||| | || ||||| Sbjct: 76 gtgaaggccaagatccaggacaaggagggcatcccccccgaccagcagaggctgatcttc 135 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || ||||| || || | |||||||||||||| ||||||||| Sbjct: 136 gccggcaagcagctggaggacggccgcaccctgtccgactacaacatccagaaggagtcc 195 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 196 accctgcacctgg 208 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | || |||||||| || |||||||||| | Sbjct: 1 atgcagatcttcgtgaagaccctgaccgggaagaccatcaccctggaggtggagccctcc 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | ||| ||||| ||||||||||||| Sbjct: 61 gacaccatcgagaacgtgaaggccaagatccaggaca 97
>gb|AF322415.1|AF322415 Synthetic construct HPV type 6b humanized L1/ubiqutin hybrid protein mRNA, complete cds Length = 1728 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| |||||||||||||| ||||||||| |||| ||||||||||| ||| Sbjct: 17 agaccctgaccggg-aagaccatcaccctggaggtggagccctccgacaccatcgagaac 75 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||||||||| |||| ||||||||| | || ||||| Sbjct: 76 gtgaaggccaagatccaggacaaggagggcatcccccccgaccagcagaggctgatcttc 135 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || || ||||| || || | |||||||||||||| ||||||||| Sbjct: 136 gccggcaagcagctggaggacggccgcaccctgtccgactacaacatccagaaggagtcc 195 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 196 accctgcacctgg 208 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | || |||||||| || |||||||||| | Sbjct: 1 atgcagatcttcgtgaagaccctgaccgggaagaccatcaccctggaggtggagccctcc 60 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | ||| ||||| ||||||||||||| Sbjct: 61 gacaccatcgagaacgtgaaggccaagatccaggaca 97
>ref|XM_579409.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_017314 (LOC497684), mRNA Length = 2545 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1646 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1704 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1705 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1764 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 1765 gcaggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggagtcc 1824 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1825 accctgcacctgg 1837 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1190 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1248 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1249 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1308 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 1309 gcaggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggagtcc 1368 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1369 accctgcacctgg 1381 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2102 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 2160 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2161 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2220 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2221 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2280 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2281 accctgcacctgg 2293 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1874 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1932 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1933 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1992 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1993 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2052 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2053 accctgcacctgg 2065 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 962 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1020 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1021 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1080 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1081 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1140 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1141 accctgcacctgg 1153 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1418 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1476 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1477 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1536 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1537 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1596 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 1597 accttgcacctgg 1609 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 734 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 792 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 793 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 852 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | || ||||||||||| ||||||||| Sbjct: 853 gcaggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaaggagtcc 912 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 913 accctgcacctgg 925 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 506 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 564 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 565 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 624 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 625 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 684 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 685 accttgcacctgg 697 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 278 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 336 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 337 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 396 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 397 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 456 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 457 accttgcacctgg 469 Score = 135 bits (68), Expect = 1e-28 Identities = 149/178 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||| || ||||||||| || || | |||||| |||||| Sbjct: 64 aagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggcaaagatc 123 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||| ||||||||| | || |||||||| |||||||| || Sbjct: 124 caggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctg 183 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || |||||||| || || | || ||||||||||| |||||||||||||| ||||||| Sbjct: 184 gaagatggccgcaccctgtcagattacaacatccagaaggagtccaccctgcacctgg 241 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2086 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2135 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1858 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1907 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1630 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1679 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1402 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1451 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1174 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1223 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 946 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 995 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 718 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 767 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 490 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 539 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 262 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 311 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 2314 atgcagatctttgtgaagaccctgacaggcaagaccat 2351
>emb|X58195.1|GGPOUBII G.gallus DNA for polyubiquitin gene Ub II Length = 1483 Score = 159 bits (80), Expect = 8e-36 Identities = 206/254 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || ||||||||| || |||| ||||| ||| Sbjct: 707 ggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaacgtgaaggccaag 766 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 767 atccaggacaaggagggcattccccccgatcagcagaggctgatctttgctggcaagcag 826 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || | |||||||||||||| |||||||||||||| |||||| Sbjct: 827 ctggaagatgggcgcactctgtccgactacaacatccagaaggagtccaccctgcacctg 886 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||| || || ||||||||||||||||| ||| || | ||||||||||| Sbjct: 887 gtgctgcgcctcaggggagggatgcagatctttgtgaagaccttgactggcaagaccatc 946 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 947 accctggaggtgga 960 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| |||||||| || |||||||| || |||| ||||| ||| Sbjct: 935 ggcaagaccatcaccctggaggtggaacccagcgacaccattgagaacgtgaaggccaag 994 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| || || ||| | || ||||||||||||||||| Sbjct: 995 atccaggacaaggagggcattccccccgatcaacagaggctgatctttgctggcaagcag 1054 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| |||||||||||||| |||||| Sbjct: 1055 ctggaagatggacgcaccctgtctgactacaacatccagaaggagtccaccctgcacctg 1114 Query: 193 g 193 | Sbjct: 1115 g 1115 Score = 109 bits (55), Expect = 6e-21 Identities = 140/170 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | |||||||| || ||| |||||||| || | |||||| ||| Sbjct: 479 ggcaagaccatcaccttggaggtggaacccagtgataccatcgagaatgtcaaggccaag 538 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| || |||||| | || ||||| ||||||||||| Sbjct: 539 atccaggacaaggagggcattccccccgatcagcagaggctgatcttcgctggcaagcag 598 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || || || || || || | |||||||||||||| ||||||||||| Sbjct: 599 ctggaagacgggcgcaccctgtccgactacaacatccagaaggagtccac 648 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 452 atgcagatcttcgtgaagaccctcactggcaagaccatcaccttggaggtgga 504 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/50 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| ||| || | ||||||||||| || ||||||| Sbjct: 680 atgcagatctttgtgaagaccttgacaggcaagaccatcaccctggaggt 729
>emb|Z54175.1|BVDTGACB1 Bovine viral diarrhea virus TGAC-B1 RNA Length = 984 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 590 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 648 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 649 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 708 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 709 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 768 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 769 accctgcacctgg 781 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 574 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 633 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 634 gacaccatcgagaacgtgaaggccaagatccagga 668
>emb|Z54176.1|BVDCPA2 Bovine viral diarrhea virus cpA2 RNA Length = 984 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 590 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 648 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 649 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 708 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 709 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 768 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 769 accctgcacctgg 781 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 574 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 633 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 634 gacaccatcgagaacgtgaaggccaagatccagga 668
>gb|BC089218.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone IMAGE:7312282), partial cds Length = 2083 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1152 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1210 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1211 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1270 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 1271 gcaggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggagtcc 1330 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1331 accctgcacctgg 1343 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 696 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 754 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 755 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 814 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||||||||||||||| ||||||||| Sbjct: 815 gcaggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggagtcc 874 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 875 accctgcacctgg 887 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1608 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1666 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1667 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1726 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1727 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1786 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1787 accctgcacctgg 1799 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1380 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1438 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1439 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1498 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1499 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1558 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1559 accctgcacctgg 1571 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 468 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 526 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 527 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 586 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 587 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 646 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 647 accctgcacctgg 659 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 924 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 982 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 983 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1042 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1043 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1102 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 1103 accttgcacctgg 1115 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 240 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 298 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 299 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 358 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | || ||||||||||| ||||||||| Sbjct: 359 gcaggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaaggagtcc 418 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 419 accctgcacctgg 431 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 12 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 70 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 71 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 130 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 131 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 190 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 191 accttgcacctgg 203 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1592 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1641 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1364 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1413 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1136 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1185 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 908 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 957 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 680 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 729 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 452 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 501 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 224 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 273 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 1820 atgcagatctttgtgaagaccctgacaggcaagaccat 1857 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/45 (86%) Strand = Plus / Plus Query: 219 gatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 |||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1 gatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 45
>dbj|AB099083.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS13778 Length = 567 Score = 159 bits (80), Expect = 8e-36 Identities = 164/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 323 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 381 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || |||||||||||| |||| ||||||||| | ||||||||| Sbjct: 382 gtgaaggccaagatccaggataaggagggcattccccccgaccagcagaggctcatcttt 441 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 442 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 501 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 502 accctgcacctgg 514 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| ||||| ||| Sbjct: 106 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 165 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 166 atccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcag 225 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||| ||||||||||| || ||||| ||||| |||||| Sbjct: 226 ctggaagatggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctg 285 Query: 193 g 193 | Sbjct: 286 g 286 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 79 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 138 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 139 gacaccatcgagaacgtgaaggccaagatccagga 173
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 159 bits (80), Expect = 8e-36 Identities = 144/167 (86%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| || |||||||||||||||| |||| | |||||| Sbjct: 1337183 aagactatcaccctcgaggtggagtcttccgacaccatcgacaacgtcaagtccaagatc 1337242 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||||||||||||||| || ||||| || || ||||| || Sbjct: 1337243 caggacaaggagggaattcccccggaccagcagcgacttatcttcgccggtaagcagctc 1337302 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || ||||| || ||| |||||||||||||||| ||||||||||| Sbjct: 1337303 gaggacggccgaaccctttctgactacaacatccagaaggagtccac 1337349 Score = 157 bits (79), Expect = 3e-35 Identities = 146/170 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||| | ||| Sbjct: 1218875 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaagtccaag 1218934 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||||||||||||||| || ||||| || || ||||| Sbjct: 1218935 atccaggacaaggagggaatccccccggaccagcagcgacttatcttcgccggtaagcag 1218994 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || || ||||| || ||| | |||||||||||||| ||||||||||| Sbjct: 1218995 ctcgaggacggccgaactctttccgactacaacatccagaaggagtccac 1219044
>gb|U29161.1|ZMU29161 Zea mays clone MubG7 ubiquitin fusion protein gene, complete cds Length = 2985 Score = 159 bits (80), Expect = 8e-36 Identities = 146/170 (85%) Strand = Plus / Plus Query: 31 gaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggc 90 |||||||||||||| |||||||||||||||| ||||| ||||| || |||||||||||| Sbjct: 1974 gaggtggagtcctcggacaccatcgacaacgtgaaggccaagatacaggacaaggagggc 2033 Query: 91 attnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtaca 150 || | |||||||||||||| || ||||| || |||||||| || || || ||||| || Sbjct: 2034 atcccgccggaccagcagcggctaatcttcgccggcaagcagctcgaggacggccgcacc 2093 Query: 151 cttgctgactacaacatccanaaggagtccaccctncacctggagctccg 200 || || |||||||||||||| |||||||||||||| ||||||| |||||| Sbjct: 2094 ctcgccgactacaacatccagaaggagtccaccctccacctggtgctccg 2143 Score = 71.9 bits (36), Expect = 1e-09 Identities = 80/97 (82%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| || || || || ||||||||||| | | | Sbjct: 1929 atgcagatcttcgtgaagaccctgacggggaaaacgatcacgttggaggtggagtcctcg 1988 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||| ||||||| Sbjct: 1989 gacaccatcgacaacgtgaaggccaagatacaggaca 2025
>gb|M68937.1|MZEUBFA Zea mays ubiquitin fusion protein (UBF9) gene, complete cds Length = 1624 Score = 159 bits (80), Expect = 8e-36 Identities = 146/170 (85%) Strand = Plus / Plus Query: 31 gaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggc 90 |||||||||||||| |||||||||||||||| ||||| ||||| || |||||||||||| Sbjct: 952 gaggtggagtcctcggacaccatcgacaacgtgaaggccaagatacaggacaaggagggc 1011 Query: 91 attnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtaca 150 || | |||||||||||||| || ||||| || |||||||| || || || ||||| || Sbjct: 1012 atcccgccggaccagcagcggctaatcttcgccggcaagcagctcgaggacggccgcacc 1071 Query: 151 cttgctgactacaacatccanaaggagtccaccctncacctggagctccg 200 || || |||||||||||||| |||||||||||||| ||||||| |||||| Sbjct: 1072 ctcgccgactacaacatccagaaggagtccaccctccacctggtgctccg 1121 Score = 71.9 bits (36), Expect = 1e-09 Identities = 80/97 (82%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| |||| || || || || ||||||||||| | | | Sbjct: 907 atgcagatcttcgtgaagaccctgacggggaaaacgatcacgttggaggtggagtcctcg 966 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| ||| ||||| ||||| ||||||| Sbjct: 967 gacaccatcgacaacgtgaaggccaagatacaggaca 1003
>gb|DQ216245.1| Taeniopygia guttata clone 0065P0025D10 ubiquitin C variant 5-like mRNA, complete sequence Length = 1438 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| |||||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 441 ggcaagaccatcactcttgaggtggagcccagtgacaccatcgagaacgtcaaggccaag 500 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| ||||||||| | || || || ||||||||||| Sbjct: 501 atccaggacaaggagggcattcccccagaccagcagaggctgattttcgctggcaagcag 560 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || || |||||||| |||||| Sbjct: 561 ctggaagatgggcgcaccctgtctgactacaacatccagaaagaatccaccctgcacctg 620 Query: 193 g 193 | Sbjct: 621 g 621 Score = 121 bits (61), Expect = 2e-24 Identities = 243/310 (78%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 202 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccattgaaaat 260 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || | || ||||||||| | || |||||| Sbjct: 261 gtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatcttt 320 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| || || || |||||||||||||||| ||||| ||| Sbjct: 321 gctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaaggaatcc 380 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||| || || ||||||||||||||||| |||||| | Sbjct: 381 accctgcacctggtgctgcgcctgagaggtgggatgcagatctttgtgaaaaccctgact 440 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 441 ggcaagaccatcactcttgaggtggagcccagtgacaccatcgagaacgtcaaggccaag 500 Query: 301 atccaggaca 310 |||||||||| Sbjct: 501 atccaggaca 510 Score = 115 bits (58), Expect = 1e-22 Identities = 176/221 (79%) Strand = Plus / Plus Query: 31 gaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggc 90 ||||||||| || |||||||||||| || | ||||| |||||||| |||||||| || Sbjct: 3 gaggtggagcccagtgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggt 62 Query: 91 attnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtaca 150 || | || ||||||||| | || ||||||||||||||||| || || ||||| || || Sbjct: 63 atccctcctgaccagcagaggctgatctttgctggcaagcagctggaagatgggcgcacc 122 Query: 151 cttgctgactacaacatccanaaggagtccaccctncacctggagctccgncttcnnnnn 210 || |||||||||||||||| ||||| |||||||| ||||||| ||| || || Sbjct: 123 ctgtctgactacaacatccagaaggaatccaccctgcacctggtgctgcgcctgagaggt 182 Query: 211 nnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 183 gggatgcagatctttgtgaagaccctgactggcaagaccat 223 Score = 111 bits (56), Expect = 2e-21 Identities = 158/193 (81%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || |||||||||||| || Sbjct: 886 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccatcgagaat 944 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| |||| ||||||||| | || || || Sbjct: 945 gtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttc 1004 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| |||||||| Sbjct: 1005 gctggcaagcagctggaagatgggcgcaccctgtccgactacaacatccagaaggagtca 1064 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 1065 actctgcacctgg 1077 Score = 107 bits (54), Expect = 3e-20 Identities = 156/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || ||||||||| || || Sbjct: 658 agaccctgaccgg-caagaccatcactctcgaggtggagcccagtgacaccattgaaaat 716 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| |||| ||||||||| | || || || Sbjct: 717 gtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttc 776 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| ||||| | | |||||||||||||| ||||| ||| Sbjct: 777 gctggtaagcagctggaggatggtcgtactttgtccgactacaacatccagaaggaatcc 836 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 837 accctgcacct 847 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 870 atgcagatcttcgtgaagaccctgactggcaagaccat 907
>gb|BT016552.1| Zea mays clone Contig385 mRNA sequence Length = 700 Score = 157 bits (79), Expect = 3e-35 Identities = 157/185 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | |||||||||||||| |||||||| ||||| | ||||| |||||| Sbjct: 99 aagaccatcactttggaggtggagtcctccgacaccattgacaatgtgaaggccaagatc 158 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||||||||||||||| |||||||| || |||||||| || Sbjct: 159 caggacaaggagggcatccccccggaccagcagcggctcatcttcgccggcaagcagctc 218 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || || || || || || ||||||||||| || |||||||||||||| ||||||| | Sbjct: 219 gaggacggtcgcaccctcgccgactacaacattcagaaggagtccaccctccacctggtg 278 Query: 196 ctccg 200 ||||| Sbjct: 279 ctccg 283 Score = 79.8 bits (40), Expect = 6e-12 Identities = 118/145 (81%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| || ||| |||| |||||||| || ||||||||||| | | Sbjct: 69 atgcagatctttgtgaagactctgacggggaagaccatcactttggaggtggagtcctcc 128 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| || ||||| ||||||||||||| ||| || |||| ||||||| Sbjct: 129 gacaccattgacaatgtgaaggccaagatccaggacaa-ggagggcatccccccggacca 187 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| | ||||||||||| ||||| Sbjct: 188 gcagc-ggctcatcttcgccggcaa 211
>ref|XR_004580.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 746 Score = 157 bits (79), Expect = 3e-35 Identities = 246/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 120 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 178 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 179 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 238 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 239 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 298 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 299 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgacc 358 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 359 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 418 Query: 301 atccagga 308 |||||||| Sbjct: 419 atccagga 426 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 348 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 406 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 407 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 466 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 467 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 526 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 527 accctgcacctgg 539 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 104 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 163 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 164 gacaccatcgagaacgtgaaggccaagatccagga 198
>ref|XR_004579.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 977 Score = 157 bits (79), Expect = 3e-35 Identities = 246/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 122 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 180 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 181 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 240 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 241 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 300 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 301 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgacc 360 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 361 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 420 Query: 301 atccagga 308 |||||||| Sbjct: 421 atccagga 428 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 578 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 636 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 637 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 696 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 697 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 756 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 757 accctgcacctgg 769 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 350 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 408 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 409 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 468 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 469 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 528 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 529 accctgcacctgg 541 Score = 56.0 bits (28), Expect = 8e-05 Identities = 75/93 (80%) Strand = Plus / Plus Query: 216 gcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctgga 275 ||||||||| ||||| |||||| | ||||||||||| || |||||||||| | || Sbjct: 564 gcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtga 623 Query: 276 caccatccacancgtnaaggcgaagatccagga 308 ||||||| | | ||| ||||| ||||||||||| Sbjct: 624 caccatcgagaacgtgaaggccaagatccagga 656 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 106 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 165 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 166 gacaccatcgagaacgtgaaggccaagatccagga 200
>ref|XM_505175.1| Yarrowia lipolytica CLIB122, YALI0F08745g predicted mRNA Length = 387 Score = 157 bits (79), Expect = 3e-35 Identities = 146/170 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||| | ||| Sbjct: 28 ggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaagtccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||| || |||||||||||||||| || ||||| || || ||||| Sbjct: 88 atccaggacaaggagggaatccccccggaccagcagcgacttatcttcgccggtaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || || ||||| || ||| | |||||||||||||| ||||||||||| Sbjct: 148 ctcgaggacggccgaactctttccgactacaacatccagaaggagtccac 197
>gb|AY251798.1| Lotharella amoeboformis ubiquitin/actin fusion protein 3 gene, partial cds Length = 706 Score = 157 bits (79), Expect = 3e-35 Identities = 148/173 (85%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||||||||| || || ||||| ||||||||| ||| || |||| ||||||||| Sbjct: 14 accatcacccttgatgtcgactcctccgacaccatcaacaccgtcaagcagaagatccag 73 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 ||||||||||| ||| |||| || |||||||| |||||||| || |||||||| || || Sbjct: 74 gacaaggagggaattccccctgatcagcagcgcctcatcttcgcgggcaagcagctcgag 133 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 |||||||| || ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 134 gatggccgcacccttgccgactacaacatccagaaggagtccacccttcacct 186
>gb|DQ118117.1| Lupinus albus polyubiquitin mRNA, partial cds Length = 397 Score = 157 bits (79), Expect = 3e-35 Identities = 146/170 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| Sbjct: 130 ggcaagaccatcacccttgaggtggagagctctgataccattgacaacgttaaggctaag 189 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| | |||||||||||| | | |||||||| || ||||| Sbjct: 190 atccaggacaaggagggcattccaccggaccagcagaggttgatctttgcaggaaagcag 249 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 ||||| ||||| || || || || |||||||||||||| ||||||||||| Sbjct: 250 cttgaggatggtcgcaccctagccgactacaacatccagaaggagtccac 299 Score = 77.8 bits (39), Expect = 2e-11 Identities = 79/94 (84%) Strand = Plus / Plus Query: 112 ctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaacatccan 171 ||||||||||| || ||||| ||||| || ||||| || || || |||||||||||||| Sbjct: 1 ctcatctttgccggaaagcaacttgaggacggccgcaccctagccgactacaacatccag 60 Query: 172 aaggagtccaccctncacctggagctccgncttc 205 ||||||||||| || ||||| | |||||| |||| Sbjct: 61 aaggagtccacactccaccttgtgctccgtcttc 94 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacacca 52 |||||||||||||||||||||||| |||||| |||| Sbjct: 361 aagaccatcacccttgaggtggagagctctgatacca 397
>ref|NM_001009117.1| Pan troglodytes ubiquitin B (UBB), mRNA Length = 690 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| ||||| | || ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcatccctcccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 148 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcatctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgactgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 127 bits (64), Expect = 3e-26 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgactggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>dbj|AB089619.1| Pan troglodytes UbB gene for polyubiquitin B, complete cds Length = 690 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| || |||||||||||| || | ||||| ||| Sbjct: 28 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || ||||| ||||| | || ||||||||| | ||||||||||| |||||||| Sbjct: 88 atccaggataaggaaggcatccctcccgaccagcagaggctcatctttgcaggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||||||||| ||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 148 ctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcatctg 207 Query: 193 g 193 | Sbjct: 208 g 208 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 245 agaccctgactgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 303 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 304 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 363 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 364 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 423 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 424 accctgcacctgg 436 Score = 127 bits (64), Expect = 3e-26 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 473 agaccctgaccgg-caagaccatcactctggaggtggagcccagtgacaccatcgaaaat 531 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 532 gtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagaggctcatcttt 591 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 592 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 651 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 652 accctgcacctgg 664 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtgga 509 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 229 atgcagatcttcgtgaagaccctgactggcaagaccat 266 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccat 38
>gb|AC163692.4| Mus musculus BAC clone RP24-68H1 from chromosome 14, complete sequence Length = 224333 Score = 157 bits (79), Expect = 3e-35 Identities = 246/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 146083 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 146025 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 146024 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 145965 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 145964 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 145905 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 145904 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgacc 145845 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 145844 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 145785 Query: 301 atccagga 308 |||||||| Sbjct: 145784 atccagga 145777 Score = 149 bits (75), Expect = 7e-33 Identities = 245/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 145855 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 145797 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 145796 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 145737 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 145736 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 145677 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 145676 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgact 145617 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 145616 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 145557 Query: 301 atccagga 308 |||||||| Sbjct: 145556 atccagga 145549 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 145627 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 145569 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 145568 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 145509 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 145508 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 145449 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 145448 accctgcacctgg 145436 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 146099 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 146040 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 146039 gacaccatcgagaacgtgaaggccaagatccagga 146005
>dbj|D83208.1|GPIUBIY Cavia cobaya mRNA for ubiquitin, complete cds Length = 1028 Score = 157 bits (79), Expect = 3e-35 Identities = 154/181 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || ||||||||| || || | |||||| ||| Sbjct: 530 ggcaagaccatcaccctcgaggtggagcccagtgacaccattgagaatgtcaaggccaag 589 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||| | || ||||| ||||||||||| Sbjct: 590 atccaagacaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcag 649 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| |||||||||||||| |||||| Sbjct: 650 ctggaagatgggcgcaccctctctgactacaacatccagaaggagtccaccctgcacctg 709 Query: 193 g 193 | Sbjct: 710 g 710 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || ||||||||| || || | |||||| ||| Sbjct: 758 ggcaagaccatcaccctcgaggtggagcccagtgacaccattgagaatgtcaaggccaag 817 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||| | || ||||| ||||||||||| Sbjct: 818 atccaagacaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcag 877 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || || | |||||||||||||| |||||||||||||| |||||| Sbjct: 878 ctggaagacgggcgcaccctctccgactacaacatccagaaggagtccaccctgcacctg 937 Query: 193 g 193 | Sbjct: 938 g 938 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || ||||||||| || || | |||||| ||| Sbjct: 302 ggcaagaccatcaccctcgaggtagagcccagtgacaccattgagaatgtcaaggccaag 361 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||| | || ||||| ||||||||||| Sbjct: 362 atccaagacaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcag 421 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || || |||||||||||||||| |||||||||||||| |||||| Sbjct: 422 ctggaagacgggcgcaccctctctgactacaacatccagaaggagtccaccctgcacctg 481 Query: 193 g 193 | Sbjct: 482 g 482 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || ||||||||| || || | |||||| ||| Sbjct: 74 ggcaagaccatcaccctcgaggtagagcccagtgacaccattgagaatgtcaaggccaag 133 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||| | || ||||| ||||||||||| Sbjct: 134 atccaagacaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcag 193 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || || || || || |||||||||||||||| |||||||||||||| |||||| Sbjct: 194 ctggaagacgggcgcaccctctctgactacaacatccagaaggagtccaccctgcacctg 253 Query: 193 g 193 | Sbjct: 254 g 254 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 503 atgcagatcttcgtgaagaccctcactggcaagaccat 540 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 275 atgcagatcttcgtgaagaccctcactggcaagaccat 312
>gb|AY748811.1| Thaumatomonas sp. DDM-2005 polyubiquitin (UBQ) gene, partial cds Length = 306 Score = 157 bits (79), Expect = 3e-35 Identities = 160/189 (84%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 |||||| ||||||||||| || || |||||||| ||||||||||| |||| |||| ||| Sbjct: 27 gggcaaaaccatcaccctcgatgtcgagtcctcggacaccatcgagaacgtcaagcagaa 86 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| |||||||||||||| | || ||||||||||| |||||||| || |||||||| Sbjct: 87 gatccaggacaaggagggcatccctcctgaccagcagcgcctcatcttcgccggcaagca 146 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || ||||| ||||| || || |||||||||||||| |||||||| ||||| ||||| Sbjct: 147 gctcgaagatggtcgtacgctcgccgactacaacatccagaaggagtcaacccttcacct 206 Query: 192 ggagctccg 200 | |||||| Sbjct: 207 cgtgctccg 215 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcga 56 ||||||||||||||||| || || |||||||| ||||||||||| Sbjct: 262 ggcaagaccatcaccctcgatgtcgagtcctcggacaccatcga 305 Score = 48.1 bits (24), Expect = 0.020 Identities = 71/86 (82%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 273 ggacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacc 332 |||||||||| | | ||| ||| |||||||||||||| ||| || ||||| | |||| Sbjct: 60 ggacaccatcgagaacgtcaagcagaagatccaggacaa-ggagggcatccctcctgacc 118 Query: 333 agcagcagcctcatcttcgctggcaa 358 |||||| ||||||||||||| ||||| Sbjct: 119 agcagc-gcctcatcttcgccggcaa 143
>gb|AY232172.1| Drosophila yakuba clone yak-ad_RpL40 mRNA sequence Length = 384 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 28 ggcaagaccatcaccttggaggtggagccttctgacaccatcgagaatgtcaaggccaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| || ||||||||||| ||||| || |||||||| Sbjct: 88 atccaggataaggagggcattcccccagatcagcagcgtctgatcttcgccggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || ||||| || || | |||||||||||||| |||||||||||||| ||| || Sbjct: 148 ctggaggacggccgcactctgtccgactacaacatccagaaggagtccaccctccacttg 207 Query: 193 gagctccg 200 | |||||| Sbjct: 208 gtgctccg 215 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||| ||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 1 atgcaaatcttcgtgaaaaccctcaccggcaagaccatcaccttggaggtgga 53
>gb|AY231778.1| Drosophila yakuba clone yak-em_RpL40 mRNA sequence Length = 384 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 28 ggcaagaccatcaccttggaggtggagccttctgacaccatcgagaatgtcaaggctaag 87 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| || ||||||||||| ||||| || |||||||| Sbjct: 88 atccaggataaggagggcattcccccagatcagcagcgtctgatcttcgccggcaagcag 147 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || || ||||| || || | |||||||||||||| |||||||||||||| ||| || Sbjct: 148 ctggaggacggccgcactctgtccgactacaacatccagaaggagtccaccctccacttg 207 Query: 193 gagctccg 200 | |||||| Sbjct: 208 gtgctccg 215 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||| ||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 1 atgcaaatcttcgtgaaaaccctcaccggcaagaccatcaccttggaggtgga 53
>gb|AY251796.1| Lotharella amoeboformis ubiquitin/actin fusion protein 1 gene, partial cds Length = 706 Score = 155 bits (78), Expect = 1e-34 Identities = 158/187 (84%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||||||||| || || ||||| ||||||||| ||| || |||| ||||||||| Sbjct: 14 accatcacccttgatgtcgactcctccgacaccatcaacaccgtcaagcagaagatccag 73 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 ||||||||||| ||| |||| || |||||||| |||||||| || |||||||| || || Sbjct: 74 gacaaggagggaattccccctgatcagcagcgcctcatcttcgcgggcaagcagctcgag 133 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || ||||| |||||||||||||| ||||||||||| || ||||| | |||| Sbjct: 134 gatggccgcacccttgccgactacaacatccagaaggagtccactcttcaccttgtgctc 193 Query: 199 cgncttc 205 || |||| Sbjct: 194 cgccttc 200
>emb|AJ844617.1| Plantago major mRNA for polyubiquitin (ubq3 gene) Length = 1319 Score = 155 bits (78), Expect = 1e-34 Identities = 139/161 (86%) Strand = Plus / Plus Query: 25 acccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaag 84 ||||||||||| ||| |||||||||||| ||||| | |||||| |||||||| || ||| Sbjct: 256 acccttgaggttgagagctctgacaccattgacaatgtcaaggccaagatccaggataag 315 Query: 85 gagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggc 144 ||||| ||| |||||||||||||| | | ||||||||||| ||||| ||||| ||||| Sbjct: 316 gagggtattcccccggaccagcagaggttgatctttgctggaaagcagcttgaggatggt 375 Query: 145 cgtacacttgctgactacaacatccanaaggagtccaccct 185 ||||| || ||||||||||||||||| |||||||||||||| Sbjct: 376 cgtaccctcgctgactacaacatccagaaggagtccaccct 416 Score = 129 bits (65), Expect = 7e-27 Identities = 138/164 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| || ||||||||||| ||| |||||||||||| ||||||| |||||| ||| Sbjct: 472 ggcaagactattacccttgaggttgagagctctgacaccattgacaacgtcaaggccaag 531 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| |||||| |||| || |||||| | | ||||||||||| || || Sbjct: 532 atccaggacaaggaaggcattcccccagatcagcagaggttgatctttgctggtaaacaa 591 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaagga 176 ||||| ||||| ||||| |||||||| |||||||| || ||||| Sbjct: 592 cttgaggatgggcgtacccttgctgattacaacattcagaagga 635 Score = 117 bits (59), Expect = 3e-23 Identities = 141/170 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||||||||||||||| || |||||||| ||||| | ||||| ||| Sbjct: 16 ggcaagaccattacccttgaggtggagagttccgacaccattgacaatgttaaggccaag 75 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||||||||||||| |||| ||||||||| | | |||||||| || ||||| Sbjct: 76 atccaggacaaggagggcattcccccagaccagcagaggttgatctttgccggaaagcag 135 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 ||||| ||||| || || ||||| || |||||||| || || |||||||| Sbjct: 136 cttgaggatggtcgcacgcttgccgattacaacattcagaaagagtccac 185 Score = 67.9 bits (34), Expect = 2e-08 Identities = 126/158 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| ||| ||| |||||||| || || | ||||| || Sbjct: 700 ggcaagaccatcaccttggaggttgagagctcagacaccattgataatgtgaaggccaaa 759 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||| ||||| Sbjct: 760 atccaggacaaggaaggtatcccaccagaccagcagagacttatctttgctggaaagcaa 819 Query: 133 cttgangatggccgtacacttgctgactacaacatcca 170 | || ||||| ||||| || ||||||||||| ||||| Sbjct: 820 ttggaggatggtcgtactctggctgactacaatatcca 857 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/50 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 |||||||||||||| || ||| || | ||||||||||| || |||||||| Sbjct: 673 atgcagatctttgtcaaaaccttgaccggcaagaccatcaccttggaggt 722
>ref|NM_057428.3| Drosophila melanogaster Ribosomal protein L40 CG2960-RA (RpL40), mRNA Length = 660 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 149 ggcaagaccatcaccttggaggtggagccttctgacaccatcgagaatgtcaaggctaag 208 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| || ||||||||||| ||||| || |||||||| Sbjct: 209 atccaggataaggagggcattcccccagatcagcagcgtctgatcttcgccggcaagcag 268 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || | ||||||||||| || |||||||||||||| ||| || Sbjct: 269 ctggaggatggccgcactctgtccgactacaacattcagaaggagtccaccctgcacttg 328 Query: 193 gagctccg 200 | |||||| Sbjct: 329 gtgctccg 336 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 122 atgcagatcttcgtgaaaaccctcaccggcaagaccatcaccttggaggtgga 174
>gb|AY075451.1| Drosophila melanogaster RE10554 full length cDNA Length = 602 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 90 ggcaagaccatcaccttggaggtggagccttctgacaccatcgagaatgtcaaggctaag 149 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| || ||||||||||| ||||| || |||||||| Sbjct: 150 atccaggataaggagggcattcccccagatcagcagcgtctgatcttcgccggcaagcag 209 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || | ||||||||||| || |||||||||||||| ||| || Sbjct: 210 ctggaggatggccgcactctgtccgactacaacattcagaaggagtccaccctgcacttg 269 Query: 193 gagctccg 200 | |||||| Sbjct: 270 gtgctccg 277 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 63 atgcagatcttcgtgaaaaccctcaccggcaagaccatcaccttggaggtgga 115
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Minus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 54833 ggcaagaccatcaccttggaggtggagccttctgacaccatcgagaatgtcaaggctaag 54774 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| || ||||||||||| ||||| || |||||||| Sbjct: 54773 atccaggataaggagggcattcccccagatcagcagcgtctgatcttcgccggcaagcag 54714 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || | ||||||||||| || |||||||||||||| ||| || Sbjct: 54713 ctggaggatggccgcactctgtccgactacaacattcagaaggagtccaccctgcacttg 54654 Query: 193 gagctccg 200 | |||||| Sbjct: 54653 gtgctccg 54646 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 54860 atgcagatcttcgtgaaaaccctcaccggcaagaccatcaccttggaggtgga 54808
>dbj|AB071067.1| Macaca fascicularis testis cDNA clone:QtsA-16192, similar to human ubiquitin B precursor ( UBB ), mRNA, NM_018955.1 Length = 883 Score = 155 bits (78), Expect = 1e-34 Identities = 162/191 (84%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || |||||||||||| || Sbjct: 53 agaccctgaccgg-caagaccatcacccttgaggtggagcccagtgacaccatcgaaaat 111 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| || ||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 112 gtgaaggccaaaatccaggataaggaaggcattccccccgaccagcagaggctcatcttt 171 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| || ||||| Sbjct: 172 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcg 231 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 232 accctgcacct 242 Score = 149 bits (75), Expect = 7e-33 Identities = 153/181 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| || | ||||| ||| Sbjct: 520 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaaggccaag 579 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || || || ||||| |||| ||||||||| | ||||||||||| |||||||| Sbjct: 580 atccaagataaagaaggcatcccccccgaccagcagaggctcatctttgcaggcaagcag 639 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || ||| |||||||||||||||| |||||||| ||||| |||||| Sbjct: 640 ctggaagatggccgcactctttctgactacaacatccagaaggagtcaaccctgcacctg 699 Query: 193 g 193 | Sbjct: 700 g 700 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| || Sbjct: 281 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgaaaat 339 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || || ||||| | || ||||||||| | ||||||||| Sbjct: 340 gtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatcttt 399 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||||||||||||||| |||||||| Sbjct: 400 gcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcg 459 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 460 accctgcacctgg 472 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| Sbjct: 493 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtgga 545 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 265 atgcagatcttcgtgaagaccctgaccggcaagaccat 302 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 37 atgcagatcttcgtgaagaccctgaccggcaagaccat 74
>gb|AF298826.1|AF298826 Prunus avium ubiquitin/ribosomal protein 27a (Ubi) mRNA, complete cds Length = 1323 Score = 155 bits (78), Expect = 1e-34 Identities = 150/176 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| ||||| ||||| ||||||||||||||||||||||| | ||||| |||||| Sbjct: 65 aagaccattaccctagaggtcgagtcctctgacaccatcgacaatgtgaaggccaagatc 124 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||||||| |||| ||||||||||| |||||||| || |||||||| || Sbjct: 125 caagacaaggagggcattcccccagaccagcagcgcctcatcttcgccggcaagcagctc 184 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || ||||| || || || || ||||||||||| ||||| || ||||| ||||| Sbjct: 185 gaggacggccgaaccctagccgattacaacatccagaaggaatcgaccctccacct 240 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| |||| |||||||| Sbjct: 35 atgcagatcttcgtgaaaaccctaacgggtaagaccat 72
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 196774 ggcaagaccatcaccttggaggtggagccttctgacaccatcgagaatgtcaaggctaag 196833 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| || ||||||||||| ||||| || |||||||| Sbjct: 196834 atccaggataaggagggcattcccccagatcagcagcgtctgatcttcgccggcaagcag 196893 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || | ||||||||||| || |||||||||||||| ||| || Sbjct: 196894 ctggaggatggccgcactctgtccgactacaacattcagaaggagtccaccctgcacttg 196953 Query: 193 gagctccg 200 | |||||| Sbjct: 196954 gtgctccg 196961 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 196747 atgcagatcttcgtgaaaaccctcaccggcaagaccatcaccttggaggtgga 196799
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 155 bits (78), Expect = 1e-34 Identities = 159/188 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 20915 ggcaagaccatcaccttggaggtggagccttctgacaccatcgagaatgtcaaggctaag 20974 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| || ||||||||||| ||||| || |||||||| Sbjct: 20975 atccaggataaggagggcattcccccagatcagcagcgtctgatcttcgccggcaagcag 21034 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || | ||||||||||| || |||||||||||||| ||| || Sbjct: 21035 ctggaggatggccgcactctgtccgactacaacattcagaaggagtccaccctgcacttg 21094 Query: 193 gagctccg 200 | |||||| Sbjct: 21095 gtgctccg 21102 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||||| | ||||||||||| || ||||||||||| Sbjct: 20888 atgcagatcttcgtgaaaaccctcaccggcaagaccatcaccttggaggtgga 20940
>gb|DQ216237.1| Taeniopygia guttata clone 0058P0020B09 ubiquitin C variant 1-like mRNA, complete sequence Length = 1346 Score = 153 bits (77), Expect = 5e-34 Identities = 284/358 (79%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgactgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| || ||||| Sbjct: 204 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtca 263 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||||| ||| || || ||||||||||| ||||| |||||| | Sbjct: 264 actctgcacctggtgctgcgcctgagaggtgggatgcagatcttcgtgaaaaccctgacc 323 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | || ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| ||||| | ||||||||| || || ||||| |||||||| Sbjct: 384 atccaggacaa-ggaaggtatccctcctgaccagcag-aggctgatctttgctggcaa 439 Score = 135 bits (68), Expect = 1e-28 Identities = 192/239 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| || | ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||||||||| Sbjct: 384 atccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggcaagcag 443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||| |||||||| |||||| Sbjct: 444 ctggaagatgggcgcaccctgtctgactacaacatccagaaggaatccaccctgcacctg 503 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || || ||||||||||||||||| |||||| | ||||||||||| Sbjct: 504 gtgctgcgcctgagaggtgggatgcagatctttgtgaagaccctgactggcaagaccat 562 Score = 105 bits (53), Expect = 1e-19 Identities = 198/251 (78%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 541 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccattgaaaat 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || | || ||||||||| | || |||||| Sbjct: 600 gtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| || || || |||||||||||||||| ||||| ||| Sbjct: 660 gctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaaggaatcc 719 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||| || || |||||||| |||||||| |||||| | Sbjct: 720 accctgcacctggtgctgcgcctcaggggtgggatgcagatttttgtgaagaccctgact 779 Query: 241 ggcaagaccat 251 ||||||||||| Sbjct: 780 ggcaagaccat 790 Score = 97.6 bits (49), Expect = 2e-17 Identities = 146/179 (81%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || |||||||||||| || Sbjct: 769 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccatcgagaat 827 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| |||| ||||||||| | || || || Sbjct: 828 gtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttc 887 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtc 179 ||||||||||| || || ||||| || || || | || ||||||||||| |||||||| Sbjct: 888 gctggcaagcagctggaagatgggcgcaccctgtccgattacaacatccagaaggagtc 946 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccat 106
>gb|DQ216234.1| Taeniopygia guttata clone 0058P0013A07 ubiquitin C variant 1-like mRNA, complete sequence Length = 1347 Score = 153 bits (77), Expect = 5e-34 Identities = 284/358 (79%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgactgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| || ||||| Sbjct: 204 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtca 263 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||||| ||| || || ||||||||||| ||||| |||||| | Sbjct: 264 actctgcacctggtgctgcgcctgagaggtgggatgcagatcttcgtgaaaaccctgacc 323 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | || ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| ||||| | ||||||||| || || ||||| |||||||| Sbjct: 384 atccaggacaa-ggaaggtatccctcctgaccagcag-aggctgatctttgctggcaa 439 Score = 135 bits (68), Expect = 1e-28 Identities = 192/239 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| || | ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||||||||| Sbjct: 384 atccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggcaagcag 443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||| |||||||| |||||| Sbjct: 444 ctggaagatgggcgcaccctgtctgactacaacatccagaaggaatccaccctgcacctg 503 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || || ||||||||||||||||| |||||| | ||||||||||| Sbjct: 504 gtgctgcgcctgagaggtgggatgcagatctttgtgaagaccctgactggcaagaccat 562 Score = 105 bits (53), Expect = 1e-19 Identities = 198/251 (78%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 541 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccattgaaaat 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || | || ||||||||| | || |||||| Sbjct: 600 gtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| || || || |||||||||||||||| ||||| ||| Sbjct: 660 gctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaaggaatcc 719 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||| || || |||||||| |||||||| |||||| | Sbjct: 720 accctgcacctggtgctgcgcctcaggggtgggatgcagatttttgtgaagaccctgact 779 Query: 241 ggcaagaccat 251 ||||||||||| Sbjct: 780 ggcaagaccat 790 Score = 87.7 bits (44), Expect = 2e-14 Identities = 144/178 (80%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || |||||||||||| || Sbjct: 769 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccatcgagaat 827 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| |||| ||||||||| | | || || Sbjct: 828 gtgaaggccaagatccaggacaaggaaggcatttccccagaccagcagaggttgattttc 887 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagt 178 ||||||||||| || || ||||| || || || | || ||||||||||| ||||||| Sbjct: 888 gctggcaagcagctggaagatgggcgcaccctgtccgattacaacatccagaaggagt 945 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccat 106
>gb|DQ216233.1| Taeniopygia guttata clone 0063P0008C04 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 153 bits (77), Expect = 5e-34 Identities = 284/358 (79%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgactgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| || ||||| Sbjct: 204 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtca 263 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||||| ||| || || ||||||||||| ||||| |||||| | Sbjct: 264 actctgcacctggtgctgcgcctgagaggtgggatgcagatcttcgtgaaaaccctgacc 323 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | || ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| ||||| | ||||||||| || || ||||| |||||||| Sbjct: 384 atccaggacaa-ggaaggtatccctcctgaccagcag-aggctgatctttgctggcaa 439 Score = 135 bits (68), Expect = 1e-28 Identities = 192/239 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| || | ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||||||||| Sbjct: 384 atccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggcaagcag 443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||| |||||||| |||||| Sbjct: 444 ctggaagatgggcgcaccctgtctgactacaacatccagaaggaatccaccctgcacctg 503 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || || ||||||||||||||||| |||||| | ||||||||||| Sbjct: 504 gtgctgcgcctgagaggtgggatgcagatctttgtgaagaccctgactggcaagaccat 562 Score = 103 bits (52), Expect = 4e-19 Identities = 157/193 (81%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||| | || || ||| || |||||||||||| || Sbjct: 769 agaccctgactgg-caagaccatcaccttggaagttgagcccagtgacaccatcgagaat 827 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| |||| ||||||||| | || || || Sbjct: 828 gtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttc 887 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| |||||||| Sbjct: 888 gctggcaagcagctggaagatgggcgcaccctgtccgactacaacatccagaaggagtca 947 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 948 actctgcacctgg 960 Score = 99.6 bits (50), Expect = 6e-18 Identities = 155/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 541 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccattgaaaat 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || | || ||||||||| | || |||||| Sbjct: 600 gtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || ||||| || || || |||||||||||||||| ||||| ||| Sbjct: 660 gctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaaggaatcc 719 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 720 accctgcacct 730 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccat 106 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/47 (87%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattgga 260 ||||||||||| ||||| |||||| | ||||||||||| || ||||| Sbjct: 753 atgcagatcttcgtgaagaccctgactggcaagaccatcaccttgga 799
>gb|DQ216232.1| Taeniopygia guttata clone 0058P0060G06 ubiquitin C variant 1-like mRNA, complete sequence Length = 1306 Score = 153 bits (77), Expect = 5e-34 Identities = 284/358 (79%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgactgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| || ||||| Sbjct: 204 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtca 263 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 || || ||||||| ||| || || ||||||||||| ||||| |||||| | Sbjct: 264 actctgcacctggtgctgcgcctgagaggtgggatgcagatcttcgtgaaaaccctgacc 323 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || | |||||||| | ||||||||| | | || ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 301 atccaggacanggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 |||||||||| ||| ||| ||||| | ||||||||| || || ||||| |||||||| Sbjct: 384 atccaggacaa-ggaaggtatccctcctgaccagcag-aggctgatctttgctggcaa 439 Score = 135 bits (68), Expect = 1e-28 Identities = 192/239 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| || | ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaaggccaag 383 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||||||||| Sbjct: 384 atccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggcaagcag 443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||| |||||||| |||||| Sbjct: 444 ctggaagatgggcgcaccctgtctgactacaacatccagaaggaatccaccctgcacctg 503 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || || ||||||||||||||||| |||||| | ||||||||||| Sbjct: 504 gtgctgcgcctgagaggtgggatgcagatctttgtgaagaccctgactggcaagaccat 562 Score = 111 bits (56), Expect = 2e-21 Identities = 158/193 (81%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || |||||||||||| || Sbjct: 770 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccatcgagaat 828 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| |||||| |||| ||||||||| | || || || Sbjct: 829 gtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttc 888 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| |||||||| Sbjct: 889 gctggcaagcagctggaagatgggcgcaccctgtccgactacaacatccagaaggagtca 948 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 949 actctgcacctgg 961 Score = 77.8 bits (39), Expect = 2e-11 Identities = 154/192 (80%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 541 agaccctgactgg-caagaccatcaccctggaagttgagcccagtgacaccattgaaaat 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| |||||||| || || | || ||||||||| | || |||||| Sbjct: 600 gtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcanct-tgangatggccgtacacttgctgactacaacatccanaaggagtc 179 ||||| || || || || ||||| || || || |||||||||||||||| ||||| || Sbjct: 660 gctggtaaacaactgggaggatgggcgcaccctctctgactacaacatccagaaggaatc 719 Query: 180 caccctncacct 191 |||||| ||||| Sbjct: 720 caccctgcacct 731 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccat 106 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| |||||| | ||||||||||| Sbjct: 754 atgcagatcttcgtgaagaccctgactggcaagaccat 791
>emb|CR700205.2|CNS0G389 Tetraodon nigroviridis full-length cDNA Length = 803 Score = 153 bits (77), Expect = 5e-34 Identities = 152/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| |||||||| |||||||||||| || ||||||||| || |||| ||||| ||| Sbjct: 484 ggcaaaaccatcactcttgaggtggagcccagtgacaccattgagaacgtgaaggccaag 543 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| |||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 544 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 603 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || | |||||||||||||| |||||||||||||| ||||| Sbjct: 604 cttgaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctccacct 662 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| ||||||||||| ||||| ||| || |||||||| || ||| ||||| ||| Sbjct: 29 ggcaaaaccatcaccctcgaggtagagcccagcgacaccattgaggacgtgaaggccaag 88 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| |||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || || |||||||||||||||| || |||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctctctgactacaacatccagaaagagtccactctccacct 207 Score = 73.8 bits (37), Expect = 4e-10 Identities = 66/77 (85%) Strand = Plus / Plus Query: 115 atctttgctggcaagcancttgangatggccgtacacttgctgactacaacatccanaag 174 ||||||||||||||||| ||||| |||||||| || || | |||||||| ||||| || Sbjct: 358 atctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaatatccagaaa 417 Query: 175 gagtccaccctncacct 191 ||||||||||| ||||| Sbjct: 418 gagtccaccctccacct 434
>emb|CR693983.2|CNS0FYFF Tetraodon nigroviridis full-length cDNA Length = 682 Score = 153 bits (77), Expect = 5e-34 Identities = 152/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| |||||||| |||||||||||| || ||||||||| || |||| ||||| ||| Sbjct: 486 ggcaaaaccatcactcttgaggtggagcccagtgacaccattgagaacgtgaaggccaag 545 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| |||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 546 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 605 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || | |||||||||||||| |||||||||||||| ||||| Sbjct: 606 cttgaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctccacct 664 Score = 129 bits (65), Expect = 7e-27 Identities = 149/179 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| ||||||||||| ||||| ||| || |||||||| || |||| ||||| ||| Sbjct: 29 ggcaaaaccatcaccctcgaggtagagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| | |||||| |||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 89 atccagggcaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || |||||||||||||||| || ||||||||||| ||||| Sbjct: 149 cttgaagatggccgcaccctctctgactacaacatccagaaagagtccaccctccacct 207 Score = 113 bits (57), Expect = 4e-22 Identities = 147/179 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| |||||||| |||||||||||| || |||||||| || || | |||| | || Sbjct: 257 ggcaaaaccatcactcttgaggtggagcccagcgacaccattgagaatgtcaagaccaaa 316 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| |||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 317 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 376 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || | |||||||| ||||| || ||||||||||| ||||| Sbjct: 377 cttgaagatggccgcaccctgtccgactacaatatccagaaagagtccaccctccacct 435
>emb|CR692919.2|CNS0FXLV Tetraodon nigroviridis full-length cDNA Length = 716 Score = 153 bits (77), Expect = 5e-34 Identities = 152/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||| |||||||| |||||||||||| || ||||||||| || |||| ||||| ||| Sbjct: 487 ggcaaaaccatcactcttgaggtggagcccagtgacaccattgagaacgtgaaggccaag 546 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| |||||| |||| || |||||| | || ||||||||||||||||| Sbjct: 547 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 606 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 ||||| |||||||| || || | |||||||||||||| |||||||||||||| ||||| Sbjct: 607 cttgaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctccacct 665 Score = 133 bits (67), Expect = 4e-28 Identities = 145/173 (83%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 ||||||||||| ||||| ||| || |||||||| || |||| ||||| |||||||| Sbjct: 35 accatcaccctcgaggtagagcccagcgacaccattgagaacgtgaaggccaagatccag 94 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 |||||||| |||||| |||| || |||||| | || ||||||||||||||||| ||||| Sbjct: 95 gacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaa 154 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 |||||||| || || |||||||||||||||| || ||||||||||| ||||| Sbjct: 155 gatggccgcaccctctctgactacaacatccagaaagagtccaccctccacct 207 Score = 99.6 bits (50), Expect = 6e-18 Identities = 107/128 (83%) Strand = Plus / Plus Query: 64 aaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgct 123 ||||| |||||||| |||||||| |||||| |||| || |||||| | || | ||||||| Sbjct: 309 aaggccaagatccaggacaaggaaggcattccccctgaacagcagaggctgaactttgct 368 Query: 124 ggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtccacc 183 |||||||| ||||| |||||||| || || | |||||||| ||||| || ||||||||| Sbjct: 369 ggcaagcagcttgaagatggccgcaccctgtccgactacaatatccagaaagagtccacc 428 Query: 184 ctncacct 191 || ||||| Sbjct: 429 ctccacct 436
>gb|AY056295.1| Arabidopsis thaliana At4g05320 mRNA sequence Length = 1637 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 1237 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1296 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1297 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1356 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1357 gaggatggacgtactttggccgactacaacatccagaaggagtc 1400 Score = 125 bits (63), Expect = 1e-25 Identities = 133/158 (84%) Strand = Plus / Plus Query: 28 cttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggag 87 |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| ||| Sbjct: 337 cttgaggtggagagttctgacaccatcgacaacgtcaaggccaagatccaagacaaagag 396 Query: 88 ggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgt 147 || ||| | |||||||||||| | || ||||| || || ||||| | || |||||| | Sbjct: 397 ggtattcctccggaccagcagaggctgatcttcgccggaaagcagttggaggatggcaga 456 Query: 148 acacttgctgactacaacatccanaaggagtccaccct 185 || |||||||||||||| ||||| |||||||||||||| Sbjct: 457 actcttgctgactacaatatccagaaggagtccaccct 494 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 97 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 156 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 157 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 216 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 217 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Score = 63.9 bits (32), Expect = 3e-07 Identities = 132/167 (79%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||||||| ||||||||||| || |||| || || |||||| Sbjct: 781 aagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagccaagatc 840 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||| ||||| || | |||||||||||| | | ||||| || || ||||| ||| Sbjct: 841 caggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaagcaactt 900 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 901 gaagatggaagaactttggctgactacaacattcagaaggagtccac 947 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 1267 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1325 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1326 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1364 Score = 60.0 bits (30), Expect = 5e-06 Identities = 117/148 (79%) Strand = Plus / Plus Query: 42 ctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccgga 101 |||||||||||| ||||||| ||||| |||||||| || ||||| || || | ||||| Sbjct: 1035 ctctgacaccattgacaacgtgaaggccaagatccaggataaggaaggaatccctccgga 1094 Query: 102 ccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgacta 161 ||||||| | | |||||||| || || || | || ||||| ||||| | || || || Sbjct: 1095 ccagcagaggttgatctttgccggaaaacaattggaggatggtcgtactttggcggatta 1154 Query: 162 caacatccanaaggagtccaccctncac 189 ||||||||| |||||||| ||||| ||| Sbjct: 1155 caacatccagaaggagtcgacccttcac 1182 Score = 52.0 bits (26), Expect = 0.001 Identities = 90/113 (79%) Strand = Plus / Plus Query: 70 aagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaag 129 |||||||| ||||| ||||| ||| | |||||||||||| | | ||||| || || || Sbjct: 607 aagatccaagacaaagagggtattcctccggaccagcagagattgatcttcgccggaaaa 666 Query: 130 cancttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| |||||| | || | || ||||||||||| || ||||||||||| Sbjct: 667 caacttgaagatggcagaactttggccgactacaacattcagaaggagtccac 719 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 127 gacaccatcgacaacgttaaggccaagatccagga 161 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/53 (83%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| || || | || |||||||| || ||||||||||| Sbjct: 751 atgcagatcttcgtgaagactctcaccggaaagaccatcactttggaggtgga 803
>gb|AY139999.1| Arabidopsis thaliana polyubiquitin UBQ10 (At4g05320) mRNA, complete cds Length = 1815 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 1237 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1296 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1297 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1356 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1357 gaggatggacgtactttggccgactacaacatccagaaggagtc 1400 Score = 125 bits (63), Expect = 1e-25 Identities = 133/158 (84%) Strand = Plus / Plus Query: 28 cttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggag 87 |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| ||| Sbjct: 337 cttgaggtggagagttctgacaccatcgacaacgtcaaggccaagatccaagacaaagag 396 Query: 88 ggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgt 147 || ||| | |||||||||||| | || ||||| || || ||||| | || |||||| | Sbjct: 397 ggtattcctccggaccagcagaggctgatcttcgccggaaagcagttggaggatggcaga 456 Query: 148 acacttgctgactacaacatccanaaggagtccaccct 185 || |||||||||||||| ||||| |||||||||||||| Sbjct: 457 actcttgctgactacaatatccagaaggagtccaccct 494 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 97 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 156 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 157 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 216 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 217 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Score = 63.9 bits (32), Expect = 3e-07 Identities = 132/167 (79%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||||||| ||||||||||| || |||| || || |||||| Sbjct: 781 aagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagccaagatc 840 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||| ||||| || | |||||||||||| | | ||||| || || ||||| ||| Sbjct: 841 caggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaagcaactt 900 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 901 gaagatggaagaactttggctgactacaacattcagaaggagtccac 947 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 1267 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1325 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1326 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1364 Score = 60.0 bits (30), Expect = 5e-06 Identities = 117/148 (79%) Strand = Plus / Plus Query: 42 ctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccgga 101 |||||||||||| ||||||| ||||| |||||||| || ||||| || || | ||||| Sbjct: 1035 ctctgacaccattgacaacgtgaaggccaagatccaggataaggaaggaatccctccgga 1094 Query: 102 ccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgacta 161 ||||||| | | |||||||| || || || | || ||||| ||||| | || || || Sbjct: 1095 ccagcagaggttgatctttgccggaaaacaattggaggatggtcgtactttggcggatta 1154 Query: 162 caacatccanaaggagtccaccctncac 189 ||||||||| |||||||| ||||| ||| Sbjct: 1155 caacatccagaaggagtcgacccttcac 1182 Score = 58.0 bits (29), Expect = 2e-05 Identities = 111/140 (79%) Strand = Plus / Plus Query: 43 tctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggac 102 ||||||||||| || |||| || || |||||||| ||||| ||||| ||| | |||||| Sbjct: 580 tctgacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggac 639 Query: 103 cagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactac 162 |||||| | | ||||| || || || || ||||| |||||| | || | || |||||| Sbjct: 640 cagcagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactac 699 Query: 163 aacatccanaaggagtccac 182 ||||| || ||||||||||| Sbjct: 700 aacattcagaaggagtccac 719 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 127 gacaccatcgacaacgttaaggccaagatccagga 161 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/53 (83%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| || || | || |||||||| || ||||||||||| Sbjct: 751 atgcagatcttcgtgaagactctcaccggaaagaccatcactttggaggtgga 803
>emb|AJ844615.1| Plantago major ubq1 gene for polyubiquitin Length = 1189 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||| ||| Sbjct: 316 ggcaagaccatcacccttgaggtggagagctccgacaccattgacaacgttaaggccaag 375 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| || |||||||||||| |||| ||||||||| | | |||||||| |||||||| Sbjct: 376 atccaagataaggagggcattcccccagaccagcagaggttgatctttgccggcaagcaa 435 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaagga 176 ||||| ||||| ||||| |||||||| |||||||| || ||||| Sbjct: 436 cttgaggatgggcgtacccttgctgattacaacattcagaagga 479 Score = 83.8 bits (42), Expect = 4e-13 Identities = 141/176 (80%) Strand = Plus / Plus Query: 25 acccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaag 84 ||||| ||||| || ||||| ||||| ||||| || | || || |||||||| |||||| Sbjct: 100 accctagaggttgaatcctcagacacaatcgataatgttaaagctaagatccaggacaag 159 Query: 85 gagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggc 144 || || || | ||||||||||| | | |||||||| || ||||| || || ||||| Sbjct: 160 gaagggatccctccggaccagcaaaggttgatctttgccggtaagcagctggaggatggt 219 Query: 145 cgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctccg 200 ||||| ||||| |||||||||||||| |||||||| ||||| ||| ||| |||||| Sbjct: 220 cgtacccttgccgactacaacatccagaaggagtctacccttcacttggtgctccg 275 Score = 61.9 bits (31), Expect = 1e-06 Identities = 127/161 (78%) Strand = Plus / Plus Query: 31 gaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggc 90 ||||||||| ||| |||||||| || |||| ||||| || || || |||||||| || Sbjct: 790 gaggtggagagctcagacaccattgataacgtgaaggctaaaattcaggacaaggaaggt 849 Query: 91 attnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtaca 150 || | || ||||||||| | |||||||| ||||| ||||| | || || || | || Sbjct: 850 atccctccagaccagcagaggctcatcttcgctggaaagcagttggaggacggaaggact 909 Query: 151 cttgctgactacaacatccanaaggagtccaccctncacct 191 ||||||||||||||||| || |||||||| ||||| ||||| Sbjct: 910 cttgctgactacaacattcaaaaggagtcaaccctccacct 950 Score = 56.0 bits (28), Expect = 8e-05 Identities = 126/160 (78%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||||||||| || ||| || | ||||||||||| || |||||||| || | | Sbjct: 517 atgcagatctttgtcaagaccttgactggcaagaccattaccttggaggttgaaagctcg 576 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 ||||||||| | | || |||||||| || ||||||| ||| ||| |||| ||||||| Sbjct: 577 gacaccatcgataatgtgaaggcgaaaattcaggacaa-ggaaggtatcccaccggacca 635 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 |||| || || ||||| ||||| || || || |||||||| Sbjct: 636 gcag-agacttatctttgctggaaagcaattggaggatgg 674 Score = 52.0 bits (26), Expect = 0.001 Identities = 124/158 (78%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||| ||| | ||||| || ||| ||||||||||| || | |||||||| Sbjct: 544 ggcaagaccattaccttggaggttgaaagctcggacaccatcgataatgtgaaggcgaaa 603 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || |||||||| || || | |||||||||||| | || ||||||||||| ||||| Sbjct: 604 attcaggacaaggaaggtatcccaccggaccagcagagacttatctttgctggaaagcaa 663 Query: 133 cttgangatggccgtacacttgctgactacaacatcca 170 | || ||||| || || || || |||||||| ||||| Sbjct: 664 ttggaggatggtcgcactctggccgactacaatatcca 701
>gb|AF436850.1|AF436850 Cucumis melo polyubiquitin mRNA, partial cds Length = 433 Score = 153 bits (77), Expect = 5e-34 Identities = 162/191 (84%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| || ||||||||||| ||||| || |||||||| |||||||| ||| Sbjct: 136 agaccctgac-gggtaaaaccatcaccctcgaggtcgaatcctctgataccatcgataac 194 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 195 gtcaaggcaaagatccaggacaaggagggaattcccccagaccaacaaagactcatcttt 254 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| | || || |||||||| ||||| || ||||||||||| ||||||||| Sbjct: 255 gctggtaagcaattagaggacggccgtacccttgccgattacaacatccagaaggagtcc 314 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 315 accctccacct 325 Score = 71.9 bits (36), Expect = 1e-09 Identities = 91/111 (81%) Strand = Plus / Plus Query: 95 ccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttg 154 |||| ||||| |||||||| ||||| ||||| ||||| || || |||||||| || | | Sbjct: 1 ccccagaccaacagcgtcttatcttcgctggaaagcaactcgaggatggccgcactttgg 60 Query: 155 ctgactacaacatccanaaggagtccaccctncacctggagctccgncttc 205 | |||||||||||||| |||||||| ||||| ||| ||| ||||| |||| Sbjct: 61 ccgactacaacatccagaaggagtctaccctccacttggtcctccgtcttc 111 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggc 68 |||||||||||||| ||||| ||| |||||||||||||||||||| |||||| Sbjct: 378 aagaccatcaccctagaggttgagagctctgacaccatcgacaacgtcaaggc 430
>gb|AY057500.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1319 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 1009 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1068 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1069 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1128 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1129 gaggatggacgtactttggccgactacaacatccagaaggagtc 1172 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 97 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 156 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 157 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 216 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 217 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Score = 109 bits (55), Expect = 6e-21 Identities = 131/158 (82%) Strand = Plus / Plus Query: 28 cttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggag 87 |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| ||| Sbjct: 337 cttgaggtggagagttctgacaccatcgacaacgtcaaggccaagatccaagacaaagag 396 Query: 88 ggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgt 147 || ||| | |||||||||||| | | ||||| || || ||||| || || |||||| | Sbjct: 397 ggtattcctccggaccagcagagattgatcttcgccggaaagcagctggaagatggcaga 456 Query: 148 acacttgctgactacaacatccanaaggagtccaccct 185 || | |||||||||||||| || |||||||||||||| Sbjct: 457 actttggctgactacaacattcagaaggagtccaccct 494 Score = 63.9 bits (32), Expect = 3e-07 Identities = 132/167 (79%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||||||| ||||||||||| || |||| || || |||||| Sbjct: 553 aagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagccaagatc 612 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||| ||||| || | |||||||||||| | | ||||| || || ||||| ||| Sbjct: 613 caggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaagcaactt 672 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 673 gaagatggaagaactttggctgactacaacattcagaaggagtccac 719 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 1039 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1097 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1098 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1136 Score = 60.0 bits (30), Expect = 5e-06 Identities = 117/148 (79%) Strand = Plus / Plus Query: 42 ctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccgga 101 |||||||||||| ||||||| ||||| |||||||| || ||||| || || | ||||| Sbjct: 807 ctctgacaccattgacaacgtgaaggccaagatccaggataaggaaggaatccctccgga 866 Query: 102 ccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgacta 161 ||||||| | | |||||||| || || || | || ||||| ||||| | || || || Sbjct: 867 ccagcagaggttgatctttgccggaaaacaattggaggatggtcgtactttggcggatta 926 Query: 162 caacatccanaaggagtccaccctncac 189 ||||||||| |||||||| ||||| ||| Sbjct: 927 caacatccagaaggagtcgacccttcac 954 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 127 gacaccatcgacaacgttaaggccaagatccagga 161 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/53 (83%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| || || | || |||||||| || ||||||||||| Sbjct: 523 atgcagatcttcgtgaagactctcaccggaaagaccatcactttggaggtgga 575
>gb|AY052698.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1356 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 1009 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1068 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1069 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1128 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1129 gaggatggacgtactttggccgactacaacatccagaaggagtc 1172 Score = 125 bits (63), Expect = 1e-25 Identities = 133/158 (84%) Strand = Plus / Plus Query: 28 cttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggag 87 |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| ||| Sbjct: 337 cttgaggtggagagttctgacaccatcgacaacgtcaaggccaagatccaagacaaagag 396 Query: 88 ggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgt 147 || ||| | |||||||||||| | || ||||| || || ||||| | || |||||| | Sbjct: 397 ggtattcctccggaccagcagaggctgatcttcgccggaaagcagttggaggatggcaga 456 Query: 148 acacttgctgactacaacatccanaaggagtccaccct 185 || |||||||||||||| ||||| |||||||||||||| Sbjct: 457 actcttgctgactacaatatccagaaggagtccaccct 494 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 97 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 156 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 157 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 216 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 217 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Score = 65.9 bits (33), Expect = 9e-08 Identities = 112/140 (80%) Strand = Plus / Plus Query: 43 tctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggac 102 ||||||||||| || |||| || || |||||||| ||||| ||||| ||| | |||||| Sbjct: 580 tctgacaccattgataacgtgaaagccaagatccaggacaaagagggtattcctccggac 639 Query: 103 cagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactac 162 |||||| | | ||||| || || ||||| ||||| ||||| | || | ||||||||| Sbjct: 640 cagcagagattgatcttcgccggaaagcaacttgaagatggaagaactttggctgactac 699 Query: 163 aacatccanaaggagtccac 182 ||||| || ||||||||||| Sbjct: 700 aacattcagaaggagtccac 719 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 1039 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1097 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1098 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1136 Score = 60.0 bits (30), Expect = 5e-06 Identities = 117/148 (79%) Strand = Plus / Plus Query: 42 ctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccgga 101 |||||||||||| ||||||| ||||| |||||||| || ||||| || || | ||||| Sbjct: 807 ctctgacaccattgacaacgtgaaggccaagatccaggataaggaaggaatccctccgga 866 Query: 102 ccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgacta 161 ||||||| | | |||||||| || || || | || ||||| ||||| | || || || Sbjct: 867 ccagcagaggttgatctttgccggaaaacaattggaggatggtcgtactttggcggatta 926 Query: 162 caacatccanaaggagtccaccctncac 189 ||||||||| |||||||| ||||| ||| Sbjct: 927 caacatccagaaggagtcgacccttcac 954 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 127 gacaccatcgacaacgttaaggccaagatccagga 161
>emb|BX818394.1|CNS0AEC9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 625 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 323 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 264 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 263 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 204 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 203 gaggatggacgtactttggccgactacaacatccagaaggagtc 160 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 293 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 235 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 234 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 196 Score = 60.0 bits (30), Expect = 5e-06 Identities = 117/148 (79%) Strand = Plus / Minus Query: 42 ctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccgga 101 |||||||||||| ||||||| ||||| |||||||| || ||||| || || | ||||| Sbjct: 525 ctctgacaccattgacaacgtgaaggccaagatccaggataaggaaggaatccctccgga 466 Query: 102 ccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgacta 161 ||||||| | | |||||||| || || || | || ||||| ||||| | || || || Sbjct: 465 ccagcagaggttgatctttgccggaaaacaattggaggatggtcgtactttggcggatta 406 Query: 162 caacatccanaaggagtccaccctncac 189 ||||||||| |||||||| ||||| ||| Sbjct: 405 caacatccagaaggagtcgacccttcac 378
>emb|BX827035.1|CNS0A37F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1555 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 1233 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1292 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1293 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1352 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1353 gaggatggacgtactttggccgactacaacatccagaaggagtc 1396 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 87 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 146 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 147 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 206 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 207 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 260 Score = 109 bits (55), Expect = 6e-21 Identities = 125/150 (83%) Strand = Plus / Plus Query: 28 cttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggag 87 |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| ||| Sbjct: 327 cttgaggtggagagttctgacaccatcgacaacgtcaaggccaagatccaagacaaagag 386 Query: 88 ggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgt 147 || ||| | |||||||||||| | || ||||| || || ||||| | || |||||| | Sbjct: 387 ggtattcctccggaccagcagaggctgatcttcgccggaaagcagttggaggatggcaga 446 Query: 148 acacttgctgactacaacatccanaaggag 177 || |||||||||||||| ||||| |||||| Sbjct: 447 actcttgctgactacaatatccagaaggag 476 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 1263 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1321 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1322 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1360 Score = 52.0 bits (26), Expect = 0.001 Identities = 90/113 (79%) Strand = Plus / Plus Query: 70 aagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaag 129 |||||||| ||||| ||||| || | |||||||||||| | | ||||| || || ||| Sbjct: 826 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 885 Query: 130 cancttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 886 caacttgaagatggaagaactttggctgactacaacattcagaaggagtccac 938 Score = 50.1 bits (25), Expect = 0.005 Identities = 89/112 (79%) Strand = Plus / Plus Query: 70 aagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaag 129 |||||||| ||||| ||||| ||| | |||||||||||| | | ||||| || || || Sbjct: 598 aagatccaagacaaagagggtattcctccggaccagcagagattgatcttcgccggaaaa 657 Query: 130 cancttgangatggccgtacacttgctgactacaacatccanaaggagtcca 181 || ||||| |||||| | || | || ||||||||||| || |||||||||| Sbjct: 658 caacttgaagatggcagaactttggccgactacaacattcagaaggagtcca 709 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 117 gacaccatcgacaacgttaaggccaagatccagga 151
>emb|BX828380.1|CNS0A30T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 1235 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1294 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1295 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1354 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1355 gaggatggacgtactttggccgactacaacatccagaaggagtc 1398 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 83 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 142 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 143 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 202 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 203 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 256 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 1265 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1323 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1324 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1362 Score = 58.0 bits (29), Expect = 2e-05 Identities = 111/140 (79%) Strand = Plus / Plus Query: 43 tctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggac 102 ||||||||||| || |||| || || |||||||| ||||| ||||| ||| | |||||| Sbjct: 575 tctgacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggac 634 Query: 103 cagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactac 162 |||||| | | ||||| || || || || ||||| |||||| | || | || |||||| Sbjct: 635 cagcagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactac 694 Query: 163 aacatccanaaggagtccac 182 ||||| || ||||||||||| Sbjct: 695 aacattcagaaggagtccac 714 Score = 52.0 bits (26), Expect = 0.001 Identities = 90/113 (79%) Strand = Plus / Plus Query: 70 aagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaag 129 |||||||| ||||| ||||| || | |||||||||||| | | ||||| || || ||| Sbjct: 830 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 889 Query: 130 cancttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 890 caacttgaagatggaagaactttggctgactacaacattcagaaggagtccac 942 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 113 gacaccatcgacaacgttaaggccaagatccagga 147 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 160 tacaacatccanaaggagtccaccctncac 189 ||||||||||| |||||||| ||||| ||| Sbjct: 1152 tacaacatccagaaggagtcgacccttcac 1181
>emb|BX828308.1|CNS0A2WH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1214 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 955 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1014 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1015 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1074 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1075 gaggatggacgtactttggccgactacaacatccagaaggagtc 1118 Score = 79.8 bits (40), Expect = 6e-12 Identities = 108/131 (82%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 50 ccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggaccagcagc 109 |||||||||||| |||||| |||||||| ||||| |||| ||| | |||||||||||| Sbjct: 75 ccatcgacaacgtcaaggccaagatccaagacaaagaggt-attcctccggaccagcaga 133 Query: 110 gtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaacatcc 169 | || ||||| || || ||||| | || |||||| | || |||||||||||||| |||| Sbjct: 134 ggctgatcttcgccggaaagcagttggaggatggcagaactcttgctgactacaatatcc 193 Query: 170 anaaggagtcc 180 | ||||||||| Sbjct: 194 agaaggagtcc 204 Score = 63.9 bits (32), Expect = 3e-07 Identities = 132/167 (79%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||||||| ||||||||||| || |||| || || |||||| Sbjct: 499 aagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagccaagatc 558 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||| ||||| || | |||||||||||| | | ||||| || || ||||| ||| Sbjct: 559 caggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaagcaactt 618 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 619 gaagatggaagaactttggctgactacaacattcagaaggagtccac 665 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 985 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1043 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1044 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1082 Score = 52.0 bits (26), Expect = 0.001 Identities = 90/113 (79%) Strand = Plus / Plus Query: 70 aagatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaag 129 |||||||| ||||| ||||| ||| | |||||||||||| | | ||||| || || || Sbjct: 325 aagatccaagacaaagagggtattcctccggaccagcagagattgatcttcgccggaaaa 384 Query: 130 cancttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| |||||| | || | || ||||||||||| || ||||||||||| Sbjct: 385 caacttgaagatggcagaactttggccgactacaacattcagaaggagtccac 437 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 160 tacaacatccanaaggagtccaccctncac 189 ||||||||||| |||||||| ||||| ||| Sbjct: 871 tacaacatccagaaggagtcgacccttcac 900 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/53 (83%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| || || | || |||||||| || ||||||||||| Sbjct: 469 atgcagatcttcgtgaagactctcaccggaaagaccatcactttggaggtgga 521
>emb|BX829786.1|CNS0A19O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 370 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 311 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 310 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 251 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 250 gaggatggacgtactttggccgactacaacatccagaaggagtc 207 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 340 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 282 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 281 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 243 Score = 44.1 bits (22), Expect = 0.32 Identities = 27/29 (93%) Strand = Plus / Minus Query: 154 gctgactacaacatccanaaggagtccac 182 |||||||||||||| || ||||||||||| Sbjct: 688 gctgactacaacattcagaaggagtccac 660 Score = 42.1 bits (21), Expect = 1.3 Identities = 34/39 (87%) Strand = Plus / Minus Query: 70 aagatccangacaaggagggcattnccccggaccagcag 108 |||||||| ||||| ||||| ||| | |||||||||||| Sbjct: 1001 aagatccaagacaaagagggtattcctccggaccagcag 963 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/30 (90%) Strand = Plus / Minus Query: 160 tacaacatccanaaggagtccaccctncac 189 ||||||||||| |||||||| ||||| ||| Sbjct: 454 tacaacatccagaaggagtcgacccttcac 425
>gb|AY099138.1| Cercomonas edax isolate pub10 polyubiquitin gene, partial cds Length = 532 Score = 153 bits (77), Expect = 5e-34 Identities = 152/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||| |||||||| || |||||| ||||||||||||||| |||| ||| |||| Sbjct: 242 ggcaagactatcaccctggacgtggagagctctgacaccatcgagaacgtgaagcagaag 301 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||| |||||||| |||||||| || |||||||| Sbjct: 302 atccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccggcaagcag 361 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 362 ctcgaggacggccgcaccctggctgactacaacatccagaaggagtcgaccctgcacct 420 Score = 153 bits (77), Expect = 5e-34 Identities = 152/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| || |||||| ||||||||| ||||| |||| ||| |||| Sbjct: 8 ggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacgtgaagcagaag 67 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||| |||||||| |||||||| || |||||||| Sbjct: 68 atccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccggcaagcag 127 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 128 ctcgaggacggccgcaccctggctgactacaacatccagaaggagtcgacccttcacct 186 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacg 61 ||||||||||||||||| || |||||| ||||||||| ||||| |||| Sbjct: 476 ggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacg 524
>gb|AY099135.1| Cercomonas edax isolate pub7 polyubiquitin gene, partial cds Length = 532 Score = 153 bits (77), Expect = 5e-34 Identities = 152/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| || |||||| ||||||||| ||||| |||| ||| |||| Sbjct: 8 ggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacgtgaagcagaag 67 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||| |||||||| |||||||| || |||||||| Sbjct: 68 atccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccggcaagcag 127 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 128 ctcgaggacggccgcaccctggctgactacaacatccagaaggagtcgacccttcacct 186 Score = 145 bits (73), Expect = 1e-31 Identities = 151/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| || |||||| ||||||||| ||||| |||| ||| |||| Sbjct: 242 ggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacgtgaagcagaag 301 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||| || ||||| |||||||| || |||||||| Sbjct: 302 atccaggacaaggagggcatccccccggatcaacagcgcctcatcttcgccggcaagcag 361 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 362 ctcgaggacggccgcaccctggctgactacaacatccagaaggagtcaacccttcacct 420 Score = 46.1 bits (23), Expect = 0.081 Identities = 38/43 (88%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcg 55 ||||||||||||||||| || |||||| ||||||||| |||| Sbjct: 476 ggcaagaccatcaccctggacgtggagagctctgacacgatcg 518
>gb|AY099134.1| Cercomonas edax isolate pub6 polyubiquitin gene, partial cds Length = 298 Score = 153 bits (77), Expect = 5e-34 Identities = 152/179 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| || |||||| ||||||||| ||||| |||| ||| |||| Sbjct: 8 ggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacgtgaagcagaag 67 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| ||||||| |||||||| |||||||| || |||||||| Sbjct: 68 atccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccggcaagcag 127 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 128 ctcgaggacggccgcaccctggctgactacaacatccagaaggagtcaacccttcacct 186 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacg 61 ||||||||||||||||| || |||||| ||||||||| ||||| |||| Sbjct: 242 ggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacg 290
>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV, complete sequence Length = 145453 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 57113 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 57054 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 57053 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 56994 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 56993 gaggatggacgtactttggccgactacaacatccagaaggagtc 56950 Score = 125 bits (63), Expect = 1e-25 Identities = 133/158 (84%) Strand = Plus / Minus Query: 28 cttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggag 87 |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| ||| Sbjct: 58013 cttgaggtggagagttctgacaccatcgacaacgtcaaggccaagatccaagacaaagag 57954 Query: 88 ggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgt 147 || ||| | |||||||||||| | || ||||| || || ||||| | || |||||| | Sbjct: 57953 ggtattcctccggaccagcagaggctgatcttcgccggaaagcagttggaggatggcaga 57894 Query: 148 acacttgctgactacaacatccanaaggagtccaccct 185 || |||||||||||||| ||||| |||||||||||||| Sbjct: 57893 actcttgctgactacaatatccagaaggagtccaccct 57856 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 58253 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 58194 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 58193 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 58134 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 58133 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 58080 Score = 63.9 bits (32), Expect = 3e-07 Identities = 132/167 (79%) Strand = Plus / Minus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||||||| ||||||||||| || |||| || || |||||| Sbjct: 57569 aagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagccaagatc 57510 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||| ||||| || | |||||||||||| | | ||||| || || ||||| ||| Sbjct: 57509 caggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaagcaactt 57450 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 57449 gaagatggaagaactttggctgactacaacattcagaaggagtccac 57403 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Minus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 57083 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 57025 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 57024 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 56986 Score = 60.0 bits (30), Expect = 5e-06 Identities = 117/148 (79%) Strand = Plus / Minus Query: 42 ctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccgga 101 |||||||||||| ||||||| ||||| |||||||| || ||||| || || | ||||| Sbjct: 57315 ctctgacaccattgacaacgtgaaggccaagatccaggataaggaaggaatccctccgga 57256 Query: 102 ccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgacta 161 ||||||| | | |||||||| || || || | || ||||| ||||| | || || || Sbjct: 57255 ccagcagaggttgatctttgccggaaaacaattggaggatggtcgtactttggcggatta 57196 Query: 162 caacatccanaaggagtccaccctncac 189 ||||||||| |||||||| ||||| ||| Sbjct: 57195 caacatccagaaggagtcgacccttcac 57168 Score = 58.0 bits (29), Expect = 2e-05 Identities = 111/140 (79%) Strand = Plus / Minus Query: 43 tctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggac 102 ||||||||||| || |||| || || |||||||| ||||| ||||| ||| | |||||| Sbjct: 57770 tctgacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggac 57711 Query: 103 cagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactac 162 |||||| | | ||||| || || || || ||||| |||||| | || | || |||||| Sbjct: 57710 cagcagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactac 57651 Query: 163 aacatccanaaggagtccac 182 ||||| || ||||||||||| Sbjct: 57650 aacattcagaaggagtccac 57631 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Minus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 58223 gacaccatcgacaacgttaaggccaagatccagga 58189 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/53 (83%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| || || | || |||||||| || ||||||||||| Sbjct: 57599 atgcagatcttcgtgaagactctcaccggaaagaccatcactttggaggtgga 57547
>gb|AF031628.1|AF031628 Schizophyllum commune polyubiquitin (UBI1) gene, partial cds Length = 1167 Score = 153 bits (77), Expect = 5e-34 Identities = 113/126 (89%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 ||||||||| |||||||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 1003 gggcaagactatcacccttgaggtcgagtcgtcggacaccatcgacaacgtcaaggcgaa 1062 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| ||||||||||||||| | || |||||||||||||| |||||||| || ||||| Sbjct: 1063 gatccaggacaaggagggcattccgcccgaccagcagcgtcttatctttgccgggaagca 1122 Query: 132 ncttga 137 ||||| Sbjct: 1123 acttga 1128 Score = 93.7 bits (47), Expect = 4e-16 Identities = 165/211 (78%) Strand = Plus / Plus Query: 100 gaccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgac 159 ||||||||||| || ||||| || |||||||| || || |||||||| || ||| | ||| Sbjct: 863 gaccagcagcgcctgatcttcgccggcaagcagctcgaggatggccgcaccctttcggac 922 Query: 160 tacaacatccanaaggagtccaccctncacctggagctccgncttcnnnnnnnnatgcag 219 ||||||||||| |||||||| || || ||||| | |||||| || | |||||| Sbjct: 923 tacaacatccagaaggagtctactctccacctcgtgctccgtctccgtggcggcatgcag 982 Query: 220 atctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctggacacc 279 ||||| || || ||||| |||||||||| || || | ||||| || | ||||||| Sbjct: 983 atcttcgtcaagaccctcacgggcaagactatcacccttgaggtcgagtcgtcggacacc 1042 Query: 280 atccacancgtnaaggcgaagatccaggaca 310 ||| ||| ||| ||||||||||||||||||| Sbjct: 1043 atcgacaacgtcaaggcgaagatccaggaca 1073 Score = 91.7 bits (46), Expect = 2e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||| |||||||| |||||||||||||| | |||||| ||| Sbjct: 727 ggcaagaccatcactctcgaggttgagtcctcggacaccatcgacaatgtcaaggccaag 786 Query: 73 atccangacaaggaggg 89 ||||| ||||||||||| Sbjct: 787 atccaggacaaggaggg 803 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 |||||||||||||| || ||||| | ||||||||||| || | ||||| || | | | Sbjct: 700 atgcagatctttgtcaagacccttactggcaagaccatcactctcgaggttgagtcctcg 759 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| ||| || ||||| ||||||||||||| Sbjct: 760 gacaccatcgacaatgtcaaggccaagatccaggaca 796
>gb|L05361.1|ATHUBQ10R Arabidopsis thaliana polyubiquitin (ubq10) mRNA, complete cds Length = 1577 Score = 153 bits (77), Expect = 5e-34 Identities = 141/164 (85%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| ||| |||||||| ||||||| |||||| |||||| Sbjct: 1213 aagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaaggccaagatc 1272 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| || ||| | ||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1273 caggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaaagcagctt 1332 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtc 179 || ||||| ||||| | || |||||||||||||| |||||||| Sbjct: 1333 gaggatggacgtactttggccgactacaacatccagaaggagtc 1376 Score = 125 bits (63), Expect = 1e-25 Identities = 133/158 (84%) Strand = Plus / Plus Query: 28 cttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccangacaaggag 87 |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||| ||| Sbjct: 313 cttgaggtggagagttctgacaccatcgacaacgtcaaggccaagatccaagacaaagag 372 Query: 88 ggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangatggccgt 147 || ||| | |||||||||||| | || ||||| || || ||||| | || |||||| | Sbjct: 373 ggtattcctccggaccagcagaggctgatcttcgccggaaagcagttggaggatggcaga 432 Query: 148 acacttgctgactacaacatccanaaggagtccaccct 185 || |||||||||||||| ||||| |||||||||||||| Sbjct: 433 actcttgctgactacaatatccagaaggagtccaccct 470 Score = 111 bits (56), Expect = 2e-21 Identities = 143/174 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| |||||||| ||| |||||||||||||||| ||||| |||||| Sbjct: 73 aagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggccaagatc 132 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || |||||||||||| | ||||| |||||| | || || || || |||||||| || Sbjct: 133 caggataaggagggcattcctccggatcagcagaggcttattttcgccggcaagcagcta 192 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || ||||||||||| | ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 193 gaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 246 Score = 63.9 bits (32), Expect = 3e-07 Identities = 132/167 (79%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| | ||||||||| ||||||||||| || |||| || || |||||| Sbjct: 757 aagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagccaagatc 816 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||| ||||| || | |||||||||||| | | ||||| || || ||||| ||| Sbjct: 817 caggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaagcaactt 876 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || ||||| | || | |||||||||||||| || ||||||||||| Sbjct: 877 gaagatggaagaactttggctgactacaacattcagaaggagtccac 923 Score = 61.9 bits (31), Expect = 1e-06 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| ||| ||| ||||| ||||||||||||| ||| ||| | ||| ||||||| Sbjct: 1243 gacaccattgacaacgtcaaggccaagatccaggacaa-ggaaggtattcctccggacca 1301 Query: 334 gcagcagcctcatcttcgctggcaancattttgaggatgg 373 ||||| | |||||||||||||| || || |||||||||| Sbjct: 1302 gcagc-gtctcatcttcgctggaaagcagcttgaggatgg 1340 Score = 60.0 bits (30), Expect = 5e-06 Identities = 117/148 (79%) Strand = Plus / Plus Query: 42 ctctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccgga 101 |||||||||||| ||||||| ||||| |||||||| || ||||| || || | ||||| Sbjct: 1011 ctctgacaccattgacaacgtgaaggccaagatccaggataaggaaggaatccctccgga 1070 Query: 102 ccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgacta 161 ||||||| | | |||||||| || || || | || ||||| ||||| | || || || Sbjct: 1071 ccagcagaggttgatctttgccggaaaacaattggaggatggtcgtactttggcggatta 1130 Query: 162 caacatccanaaggagtccaccctncac 189 ||||||||| |||||||| ||||| ||| Sbjct: 1131 caacatccagaaggagtcgacccttcac 1158 Score = 58.0 bits (29), Expect = 2e-05 Identities = 111/140 (79%) Strand = Plus / Plus Query: 43 tctgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggac 102 ||||||||||| || |||| || || |||||||| ||||| ||||| ||| | |||||| Sbjct: 556 tctgacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggac 615 Query: 103 cagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactac 162 |||||| | | ||||| || || || || ||||| |||||| | || | || |||||| Sbjct: 616 cagcagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactac 675 Query: 163 aacatccanaaggagtccac 182 ||||| || ||||||||||| Sbjct: 676 aacattcagaaggagtccac 695 Score = 42.1 bits (21), Expect = 1.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| ||| ||| ||||| ||||||||||| Sbjct: 103 gacaccatcgacaacgttaaggccaagatccagga 137 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/53 (83%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| || || | || |||||||| || ||||||||||| Sbjct: 727 atgcagatcttcgtgaagactctcaccggaaagaccatcactttggaggtgga 779
>gb|J03945.1|TRBUBQIA6 T.cruzi ubiquitin mRNA, complete cds Length = 1232 Score = 153 bits (77), Expect = 5e-34 Identities = 275/347 (79%), Gaps = 2/347 (0%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 ||||||||| ||| | || |||||||| ||| |||||||| || |||| |||||||| Sbjct: 548 gggcaagacgatcgcgctcgaggtggaatccagcgacaccattgagaacgtgaaggcgaa 607 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| ||||||||||||||| | |||||||||||||| || ||||| ||||||||||| Sbjct: 608 gatccaggacaaggagggcattccgccggaccagcagcgcctgatcttcgctggcaagca 667 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || || |||||||||||||| ||||||||||| || ||||| Sbjct: 668 gctggaggacggccgcacgctcgcagactacaacatccagaaggagtccacgctgcacct 727 Query: 192 ggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || || | ||||||||||| ||||| || ||| |||||||||| || Sbjct: 728 tgtgctgcgcctgcgcggcggcatgcagatcttcgtgaagacactgacgggcaagacgat 787 Query: 252 nacattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacan 311 | | |||||||| | | |||||||| | | ||| ||||||||||||||||||| Sbjct: 788 cgcgctcgaggtggaatccagcgacaccattgagaacgtgaaggcgaagatccaggacaa 847 Query: 312 ggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || | || |||||||||||| |||| |||||||||||||| Sbjct: 848 -ggagggcattccgccggaccagcagc-gcctgatcttcgctggcaa 892 Score = 149 bits (75), Expect = 7e-33 Identities = 249/313 (79%), Gaps = 2/313 (0%) Strand = Plus / Plus Query: 46 gacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggaccag 105 |||||||| || |||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 354 gacaccattgagaacgtgaaggcgaagatccaggacaaggagggcattccgccggaccag 413 Query: 106 cagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaac 165 ||||| || ||||| ||||||||||| || || || ||||| || || || ||||||||| Sbjct: 414 cagcgcctgatcttcgctggcaagcagctggaggacggccgcacgctcgcagactacaac 473 Query: 166 atccanaaggagtccaccctncacctggagctccgncttcnnnnnnnnatgcagatcttt 225 ||||| ||||||||||| || ||||| | ||| || || | ||||||||||| Sbjct: 474 atccagaaggagtccacgctgcaccttgtgctgcgcctgcgcggcggcatgcagatcttc 533 Query: 226 gtgaanaccctgncgggcaagaccatnacattggaggtggantncctggacaccatccac 285 ||||| || ||| |||||||||| || | | |||||||| | | |||||||| | Sbjct: 534 gtgaagacactgacgggcaagacgatcgcgctcgaggtggaatccagcgacaccattgag 593 Query: 286 ancgtnaaggcgaagatccaggacanggganggtntccctncggaccagcagcagcctca 345 | ||| ||||||||||||||||||| ||| || | || |||||||||||| |||| | Sbjct: 594 aacgtgaaggcgaagatccaggacaa-ggagggcattccgccggaccagcagc-gcctga 651 Query: 346 tcttcgctggcaa 358 ||||||||||||| Sbjct: 652 tcttcgctggcaa 664 Score = 139 bits (70), Expect = 7e-30 Identities = 151/180 (83%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 ||||||||| ||| | || |||||||| ||| |||||||| || |||| |||||||| Sbjct: 776 gggcaagacgatcgcgctcgaggtggaatccagcgacaccattgagaacgtgaaggcgaa 835 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| ||||||||||||||| | |||||||||||||| || ||||| ||||||||||| Sbjct: 836 gatccaggacaaggagggcattccgccggaccagcagcgcctgatcttcgctggcaagca 895 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || ||||| || || || |||||||||||||| ||||||||||| || ||||| Sbjct: 896 gctggaggacggccgcacgctcgcagactacaacatccagaaggagtccacgctgcacct 955 Score = 137 bits (69), Expect = 3e-29 Identities = 273/347 (78%), Gaps = 2/347 (0%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 ||||||||| ||| | || |||||||| ||| |||||||| || |||| |||||||| Sbjct: 92 gggcaagacgatcgcgctcgaggtggaatccagcgacaccattgagaacgtgaaggcgaa 151 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| ||||||||||||||| | |||||||||||||| || ||||| ||||||||||| Sbjct: 152 gatccaggacaaggagggcattccgccggaccagcagcgcctgatcttcgctggcaagca 211 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || || || || || || || |||||||||||||| ||||||||||| || ||||| Sbjct: 212 gctggaggacggtcgcacgctcgcagactacaacatccagaaggagtccacgctgcacct 271 Query: 192 ggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 | ||| || || | ||||||||||| ||||| || ||| |||||||||| || Sbjct: 272 tgtgctgcgcctgcgcggcggcatgcagatcttcgtgaagacactgacgggcaagacgat 331 Query: 252 nacattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggacan 311 | | || ||||| | | |||||||| | | ||| ||||||||||||||||||| Sbjct: 332 cgcgctcgaagtggaatccagcgacaccattgagaacgtgaaggcgaagatccaggacaa 391 Query: 312 ggganggtntccctncggaccagcagcagcctcatcttcgctggcaa 358 ||| || | || |||||||||||| |||| |||||||||||||| Sbjct: 392 -ggagggcattccgccggaccagcagc-gcctgatcttcgctggcaa 436 Score = 63.9 bits (32), Expect = 3e-07 Identities = 116/145 (80%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| || ||| |||||||||| || | | |||||||| | | Sbjct: 66 atgcagatctttgtgaagacactgacgggcaagacgatcgcgctcgaggtggaatccagc 125 Query: 274 gacaccatccacancgtnaaggcgaagatccaggacanggganggtntccctncggacca 333 |||||||| | | ||| ||||||||||||||||||| ||| || | || ||||||| Sbjct: 126 gacaccattgagaacgtgaaggcgaagatccaggacaa-ggagggcattccgccggacca 184 Query: 334 gcagcagcctcatcttcgctggcaa 358 ||||| |||| |||||||||||||| Sbjct: 185 gcagc-gcctgatcttcgctggcaa 208
>dbj|AB033601.1| Cucumis melo mRNA for polyubiquitin, partial cds Length = 381 Score = 153 bits (77), Expect = 5e-34 Identities = 162/191 (84%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| ||| || ||||||||||| ||||| || |||||||| |||||||| ||| Sbjct: 134 agaccctgac-gggtaaaaccatcaccctcgaggtcgaatcctctgataccatcgataac 192 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| ||||||||||| ||| |||| ||||| || | ||||||||| Sbjct: 193 gtcaaggcaaagatccaggacaaggagggaattcccccagaccaacaaagactcatcttt 252 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| | || || |||||||| ||||| || ||||||||||| ||||||||| Sbjct: 253 gctggtaagcaattagaggacggccgtacccttgccgattacaacatccagaaggagtcc 312 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 313 accctccacct 323 Score = 69.9 bits (35), Expect = 6e-09 Identities = 87/106 (82%) Strand = Plus / Plus Query: 100 gaccagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgac 159 ||||| |||||||| ||||| ||||| ||||| || || |||||||| || | || ||| Sbjct: 4 gaccaacagcgtcttatcttcgctggaaagcaactcgaggatggccgcactttggccgac 63 Query: 160 tacaacatccanaaggagtccaccctncacctggagctccgncttc 205 ||||||||||| |||||||| ||||| ||| ||| ||||| |||| Sbjct: 64 tacaacatccagaaggagtctaccctccacttggtcctccgtcttc 109
>gb|DQ216251.1| Taeniopygia guttata clone 0063P0020H09 ubiquitin C variant 10-like mRNA, complete sequence Length = 716 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 158 agaccctgactgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 216 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 217 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 276 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || |||||||| || || | |||||||||||||| || ||||| Sbjct: 277 gctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagagtca 336 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 337 actctccacctgg 349 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 142 atgcagatctttgtgaagaccctgactggcaagaccat 179
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgaccgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || |||||||| || || |||||||||||||||| || ||||| Sbjct: 204 gctggtaagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtca 263 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 264 actctgcacctgg 276 Score = 139 bits (70), Expect = 7e-30 Identities = 160/191 (83%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 769 agaccctgactgg-caagaccatcactctcgaggtggagcccagtgacaccatcgagaat 827 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | || ||||||||| | || |||||| Sbjct: 828 gtcaaggccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatcttt 887 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| ||||| ||| Sbjct: 888 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaggaatcc 947 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 948 accctgcacct 958 Score = 109 bits (55), Expect = 6e-21 Identities = 148/181 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || ||||||||| || || | ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccattgaaaatgtgaaggccaag 383 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||||||||| Sbjct: 384 atccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggcaagcag 443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || | |||||||||||||| ||||| |||||||| |||||| Sbjct: 444 ctggaagatgggcgcaccctgtcagactacaacatccagaaggaatccaccctgcacctg 503 Query: 193 g 193 | Sbjct: 504 g 504 Score = 105 bits (53), Expect = 1e-19 Identities = 156/191 (81%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || || ||||||||| || ||||||||| || |||||||||||| || Sbjct: 997 agaccctgactgg-caggaccatcactctcgaggtggagcccagtgacaccatcgagaat 1055 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| |||||| |||| ||||||||| | || |||||| Sbjct: 1056 gtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatcttt 1115 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 |||| ||| || || ||||| || || || | |||||||||||||| ||||| ||| Sbjct: 1116 gctg----gcagctggaggatgggcgcaccctctccgactacaacatccagaaggaatcc 1171 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 1172 accctgcacct 1182 Score = 99.6 bits (50), Expect = 6e-18 Identities = 155/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 541 agaccctgaccgg-caagaccatcaccctggaagttgagcccagtgacaccattgagaat 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||| || || | || ||||||||| | || |||||| Sbjct: 600 gtcaaggccaagatccaggataaggaaggtatccctcctgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || |||||||||||||||| |||||||| Sbjct: 660 gctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtca 719 Query: 181 accctncacct 191 || || ||||| Sbjct: 720 actctgcacct 730 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 753 atgcagatctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagt 812 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | || ||||| ||||||||||||| Sbjct: 813 gacaccatcgagaatgtcaaggccaagatccaggaca 849 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccat 106 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||| |||||| || | |||||||| | Sbjct: 981 atgcagatctttgtgaagaccctgactggcaggaccatcactctcgaggtggagcccagt 1040 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | || ||||| ||||||||||||| Sbjct: 1041 gacaccatcgagaatgtcaaggccaagatccaggaca 1077
>gb|DQ216240.1| Taeniopygia guttata clone 0061P0001C12 ubiquitin C variant 2-like mRNA, complete sequence Length = 1530 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgaccgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || |||||||| || || |||||||||||||||| || ||||| Sbjct: 204 gctggtaagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtca 263 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 264 actctgcacctgg 276 Score = 147 bits (74), Expect = 3e-32 Identities = 161/191 (84%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 998 agaccctgactgg-caagaccatcactctcgaggtggagcccagtgacaccatcgagaat 1056 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| |||||| |||| ||||||||| | || |||||| Sbjct: 1057 gtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatcttt 1116 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| ||||| ||| Sbjct: 1117 gctggcaagcagctggaggatgggcgcaccctctccgactacaacatccagaaggaatcc 1176 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 1177 accctgcacct 1187 Score = 139 bits (70), Expect = 7e-30 Identities = 160/191 (83%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 770 agaccctgactgg-caagaccatcactctcgaggtggagcccagtgacaccatcgagaat 828 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | || ||||||||| | || |||||| Sbjct: 829 gtcaaggccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatcttt 888 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| ||||| ||| Sbjct: 889 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaggaatcc 948 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 949 accctgcacct 959 Score = 109 bits (55), Expect = 6e-21 Identities = 148/181 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || ||||||||| || || | ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccattgaaaatgtgaaggccaag 383 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||||||||| Sbjct: 384 atccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggcaagcag 443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || | |||||||||||||| ||||| |||||||| |||||| Sbjct: 444 ctggaagatgggcgcaccctgtcagactacaacatccagaaggaatccaccctgcacctg 503 Query: 193 g 193 | Sbjct: 504 g 504 Score = 99.6 bits (50), Expect = 6e-18 Identities = 155/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 541 agaccctgaccgg-caagaccatcaccctggaagttgagcccagtgacaccattgagaat 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||| || || | || ||||||||| | || |||||| Sbjct: 600 gtcaaggccaagatccaggataaggaaggtatccctcctgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || |||||||||||||||| |||||||| Sbjct: 660 gctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtca 719 Query: 181 accctncacct 191 || || ||||| Sbjct: 720 actctgcacct 730 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 982 atgcagatctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagt 1041 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | || ||||| ||||||||||||| Sbjct: 1042 gacaccatcgagaatgtcaaggccaagatccaggaca 1078 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccat 106 Score = 42.1 bits (21), Expect = 1.3 Identities = 78/98 (79%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 214 atgcagat-ctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncct 272 |||||||| ||||||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 753 atgcagatnctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccag 812 Query: 273 ggacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | || ||||| ||||||||||||| Sbjct: 813 tgacaccatcgagaatgtcaaggccaagatccaggaca 850
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||||||||||||| || ||||||||| || || Sbjct: 85 agaccctgaccgg-caagaccatcacccttgaggtggagcccagtgacaccattgaaaat 143 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| ||||||||||||||| |||| ||||||||| | || |||||| Sbjct: 144 gtgaaggccaagatccaggacaaggagggcattcccccagaccagcagaggctgatcttt 203 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||| ||||| || || |||||||| || || |||||||||||||||| || ||||| Sbjct: 204 gctggtaagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtca 263 Query: 181 accctncacctgg 193 || || ||||||| Sbjct: 264 actctgcacctgg 276 Score = 139 bits (70), Expect = 7e-30 Identities = 160/191 (83%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || |||||||||||| || ||||||||| || |||||||||||| || Sbjct: 769 agaccctgactgg-caagaccatcactctcgaggtggagcccagtgacaccatcgagaat 827 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| | || ||||||||| | || |||||| Sbjct: 828 gtcaaggccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatcttt 887 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || | |||||||||||||| ||||| ||| Sbjct: 888 gctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaaggaatcc 947 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 948 accctgcacct 958 Score = 109 bits (55), Expect = 6e-21 Identities = 148/181 (81%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || ||||||||| || || | ||||| ||| Sbjct: 324 ggcaagaccatcactctcgaggtggagcccagtgacaccattgaaaatgtgaaggccaag 383 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||| || || | || ||||||||| | || ||||||||||||||||| Sbjct: 384 atccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggcaagcag 443 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || | |||||||||||||| ||||| |||||||| |||||| Sbjct: 444 ctggaagatgggcgcaccctgtcagactacaacatccagaaggaatccaccctgcacctg 503 Query: 193 g 193 | Sbjct: 504 g 504 Score = 105 bits (53), Expect = 1e-19 Identities = 156/191 (81%), Gaps = 5/191 (2%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || || ||||||||| || ||||||||| || |||||||||||| || Sbjct: 997 agaccctgactgg-caggaccatcactctcgaggtggagcccagtgacaccatcgagaat 1055 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||| |||||| |||| ||||||||| | || |||||| Sbjct: 1056 gtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatcttt 1115 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 |||| ||| || || ||||| || || || | |||||||||||||| ||||| ||| Sbjct: 1116 gctg----gcagctggaggatgggcgcaccctctccgactacaacatccagaaggaatcc 1171 Query: 181 accctncacct 191 ||||| ||||| Sbjct: 1172 accctgcacct 1182 Score = 99.6 bits (50), Expect = 6e-18 Identities = 155/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || || ||| || ||||||||| || || Sbjct: 541 agaccctgaccgg-caagaccatcaccctggaagttgagcccagtgacaccattgagaat 599 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| || ||||| || || | || ||||||||| | || |||||| Sbjct: 600 gtcaaggccaagatccaggataaggaaggtatccctcctgaccagcagaggctgatcttt 659 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 ||||||||||| || || ||||| || || || |||||||||||||||| |||||||| Sbjct: 660 gctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtca 719 Query: 181 accctncacct 191 || || ||||| Sbjct: 720 actctgcacct 730 Score = 56.0 bits (28), Expect = 8e-05 Identities = 78/97 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 753 atgcagatctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagt 812 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | || ||||| ||||||||||||| Sbjct: 813 gacaccatcgagaatgtcaaggccaagatccaggaca 849 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccat 106 Score = 48.1 bits (24), Expect = 0.020 Identities = 77/97 (79%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||||||||| |||||| | |||| |||||| || | |||||||| | Sbjct: 981 atgcagatctttgtgaagaccctgactggcaggaccatcactctcgaggtggagcccagt 1040 Query: 274 gacaccatccacancgtnaaggcgaagatccaggaca 310 ||||||||| | | || ||||| ||||||||||||| Sbjct: 1041 gacaccatcgagaatgtcaaggccaagatccaggaca 1077
>ref|XM_586525.2| PREDICTED: Bos taurus polyubiquitin, transcript variant 1 (UBC), mRNA Length = 2416 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 actctggaggtgga 1941 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1580 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 accctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2313 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874894.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 16 (UBC), mRNA Length = 2416 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 actctggaggtgga 1941 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 accctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2313 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_875774.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 27 (UBC), mRNA Length = 2458 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 362 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 421 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 422 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 481 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 482 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 541 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 542 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 601 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 602 accctggaggtgga 615 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1730 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1789 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1790 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1849 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1850 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1909 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1910 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1969 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1970 actctggaggtgga 1983 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1502 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1561 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1562 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1621 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1622 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1681 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1682 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1741 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1742 accctggaggtgga 1755 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1046 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1105 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1106 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1165 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1166 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1225 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1226 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1285 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1286 actctggaggtgga 1299 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 818 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 877 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 878 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 937 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 938 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 997 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 998 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1057 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1058 accctggaggtgga 1071 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 134 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 193 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 194 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 253 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 254 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 313 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 314 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 373 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 374 accctggaggtgga 387 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1958 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2017 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2018 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2077 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2078 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2137 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2138 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2197 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2198 accctggaggtgga 2211 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 590 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 649 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 650 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 709 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 710 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 769 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 770 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 829 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 830 accctggaggtgga 843 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2186 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2245 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2246 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2305 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2306 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2355 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1274 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1333 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1334 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1393 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1394 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1453 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1454 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1513 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1514 accctggaggtgga 1527 Score = 52.0 bits (26), Expect = 0.001 Identities = 87/112 (77%) Strand = Plus / Plus Query: 155 ctgactacaacatccanaaggagtccaccctncacctggagctccgncttcnnnnnnnna 214 |||||||||||||||| || |||||||| || ||||||| ||||| || | Sbjct: 48 ctgactacaacatccagaaagagtccactctgcacctggtcctccgcctcagaggtggga 107 Query: 215 tgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 |||||||||| ||||| ||| || | ||||||||||| || |||||||||| Sbjct: 108 tgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtgga 159
>ref|XM_874811.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 15 (UBC), mRNA Length = 2416 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 actctggaggtgga 1941 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1580 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 accctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2313 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874725.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 14 (UBC), mRNA Length = 2644 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 actctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2323 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2324 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2383 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2384 accctggaggtgga 2397 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2372 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2431 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2432 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2491 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2492 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2541 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874640.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 13 (UBC), mRNA Length = 2644 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 actctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 actctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2323 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2324 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2383 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2384 accctggaggtgga 2397 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2372 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2431 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2432 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2491 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2492 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2541 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 accctggaggtgga 1713 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_875701.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 26 (UBC), mRNA Length = 2580 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 484 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 543 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 544 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 603 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 604 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 663 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 664 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 723 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 724 accctggaggtgga 737 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1852 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1911 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1912 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1971 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1972 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2031 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2032 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2091 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2092 actctggaggtgga 2105 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1624 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1683 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1684 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1743 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1744 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1803 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1804 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1863 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1864 accctggaggtgga 1877 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1168 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1227 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1228 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1287 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1288 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1347 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1348 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1407 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1408 actctggaggtgga 1421 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 940 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 999 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1000 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1059 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1060 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1119 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1120 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1179 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1180 accctggaggtgga 1193 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 256 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 315 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 316 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 375 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 376 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 435 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 436 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 495 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 496 accctggaggtgga 509 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2080 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2139 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2140 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2199 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2200 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2259 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2260 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2319 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2320 accctggaggtgga 2333 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 712 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 771 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 772 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 831 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 832 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 891 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 892 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 951 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 952 accctggaggtgga 965 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2308 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2367 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2368 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2427 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2428 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2477 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1396 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1455 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1456 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1515 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1516 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1575 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1576 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1635 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1636 accctggaggtgga 1649 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 34 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 93 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 94 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 153 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 154 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 213 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 214 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 273 Query: 259 gaggtgga 266 |||||||| Sbjct: 274 gaggtgga 281 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 1 atgcagatctttgtgaagaccct 23
>ref|XM_875631.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 25 (UBC), mRNA Length = 2644 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 actctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 actctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2323 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2324 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2383 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2384 accctggaggtgga 2397 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2372 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2431 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2432 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2491 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2492 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2541 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 accctggaggtgga 1713 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_875556.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 24 (UBC), mRNA Length = 2580 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 484 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 543 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 544 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 603 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 604 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 663 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 664 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 723 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 724 accctggaggtgga 737 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1852 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1911 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1912 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1971 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1972 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2031 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2032 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2091 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2092 actctggaggtgga 2105 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1624 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1683 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1684 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1743 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1744 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1803 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1804 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1863 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1864 accctggaggtgga 1877 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1168 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1227 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1228 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1287 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1288 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1347 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1348 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1407 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1408 actctggaggtgga 1421 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 940 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 999 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1000 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1059 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1060 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1119 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1120 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1179 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1180 accctggaggtgga 1193 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2080 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2139 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2140 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2199 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2200 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2259 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2260 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2319 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2320 accctggaggtgga 2333 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 712 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 771 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 772 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 831 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 832 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 891 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 892 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 951 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 952 accctggaggtgga 965 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 256 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 315 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 316 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 375 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 376 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 435 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 436 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 495 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 496 accctggaggtgga 509 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2308 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2367 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2368 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2427 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2428 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2477 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1396 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1455 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1456 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1515 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1516 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1575 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1576 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1635 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1636 accctggaggtgga 1649 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 34 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 93 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 94 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 153 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 154 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 213 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 214 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 273 Query: 259 gaggtgga 266 |||||||| Sbjct: 274 gaggtgga 281 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 1 atgcagatctttgtgaagaccct 23
>ref|XM_875261.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 20 (UBC), mRNA Length = 2643 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 2036 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 actctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2323 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2324 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2383 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2384 accctggaggtgga 2397 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2372 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2431 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2432 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2491 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2492 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2541 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_875130.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 18 (UBC), mRNA Length = 2825 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 2036 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2328 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2387 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2388 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2447 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2448 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2507 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2508 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2567 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2568 accctggaggtgga 2581 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2556 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2615 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2616 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2675 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2676 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2725 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 103 bits (52), Expect = 4e-19 Identities = 95/110 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgc 122 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgc 2253 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/53 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| ||| || | ||||||||||| || |||||||||| Sbjct: 2301 atgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtgga 2353 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_875488.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 23 (UBC), mRNA Length = 2644 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 actctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2323 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2324 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2383 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2384 accctggaggtgga 2397 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 accctggaggtgga 1713 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2372 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2431 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2432 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2491 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2492 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2541 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_875413.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 22 (UBC), mRNA Length = 2644 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 actctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2323 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2324 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2383 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2384 accctggaggtgga 2397 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2372 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2431 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2432 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2491 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2492 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2541 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874550.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 12 (UBC), mRNA Length = 2188 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2085 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874473.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 11 (UBC), mRNA Length = 2415 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2313 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874390.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 10 (UBC), mRNA Length = 2415 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2313 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 actctggaggtgga 1941 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874317.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 9 (UBC), mRNA Length = 2416 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2036 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 actctggaggtgga 1941 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2313 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_874230.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 8 (UBC), mRNA Length = 2613 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 637 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 696 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 697 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 756 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 757 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 816 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 817 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 876 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 877 accctggaggtgga 890 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1885 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1944 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1945 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2004 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2005 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2064 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2065 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2124 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2125 actctggaggtgga 2138 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1657 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1716 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1717 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1776 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1777 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1836 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1837 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1896 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1897 accctggaggtgga 1910 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1201 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1260 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1261 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1320 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1321 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1380 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1381 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1440 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1441 actctggaggtgga 1454 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 409 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 468 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 469 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 528 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 529 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 588 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 589 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 648 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 649 accctggaggtgga 662 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2113 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2172 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2173 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2232 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2233 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2292 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2293 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2352 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2353 accctggaggtgga 2366 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2341 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2400 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2401 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2460 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2461 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2510 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1429 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1488 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1489 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1548 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1549 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1608 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1609 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1668 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1669 accctggaggtgga 1682 Score = 111 bits (56), Expect = 2e-21 Identities = 176/222 (79%) Strand = Plus / Plus Query: 45 tgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggacca 104 |||||||||||| |||| |||||| |||||||| ||||| |||||||| |||| ||||| Sbjct: 1005 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1064 Query: 105 gcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaa 164 |||| | || |||||||| || || || || || |||||||| || || |||||||||| Sbjct: 1065 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1124 Query: 165 catccanaaggagtccaccctncacctggagctccgncttcnnnnnnnnatgcagatctt 224 |||||| || |||||||| || ||||||| ||||| || ||||||||||| Sbjct: 1125 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1184 Query: 225 tgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||| ||| || | ||||||||||| || |||||||||| Sbjct: 1185 cgtgaagaccttgaccggcaagaccatcaccctggaggtgga 1226 Score = 103 bits (52), Expect = 4e-19 Identities = 95/110 (86%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 865 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 924 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgc 122 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| Sbjct: 925 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgc 974 Score = 103 bits (52), Expect = 4e-19 Identities = 175/222 (78%) Strand = Plus / Plus Query: 45 tgacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggacca 104 |||||||||||| |||| |||||| |||||||| ||||| |||||||| |||| ||||| Sbjct: 213 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 272 Query: 105 gcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaa 164 |||| | || |||||||| || || || || || ||||| || || || |||||||||| Sbjct: 273 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 332 Query: 165 catccanaaggagtccaccctncacctggagctccgncttcnnnnnnnnatgcagatctt 224 |||||| || |||||||| || ||||||| ||||| || ||||||||||| Sbjct: 333 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 392 Query: 225 tgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||| ||| || | ||||||||||| || |||||||||| Sbjct: 393 cgtgaagaccttgaccggcaagaccatcaccctggaggtgga 434 Score = 95.6 bits (48), Expect = 1e-16 Identities = 141/174 (81%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 34 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 93 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 94 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 153 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 154 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 207 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 1 atgcagatctttgtgaagaccct 23
>ref|XM_873963.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 5 (UBC), mRNA Length = 1883 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1689 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1748 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1749 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1808 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1809 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1868 Query: 193 g 193 | Sbjct: 1869 g 1869 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 129 bits (65), Expect = 7e-27 Identities = 204/255 (80%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatcca-naaggagtccaccctncacct 191 || || |||||||| || || |||||||||||||||| ||| ||||||| || ||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagaagtccactctgcacct 1411 Query: 192 ggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccat 251 || ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 ggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccat 1471 Query: 252 nacattggaggtgga 266 || |||||||||| Sbjct: 1472 cactctggaggtgga 1486 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1461 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1520 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1521 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1580 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1581 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1640 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1641 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1700 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1701 accctggaggtgga 1714 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|XM_864638.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 3 (UBC), mRNA Length = 2872 Score = 151 bits (76), Expect = 2e-33 Identities = 205/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 956 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1015 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1016 accctggaggtgga 1029 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2144 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2203 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2204 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2263 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2264 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2323 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2324 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2383 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2384 actctggaggtgga 2397 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1916 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1975 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1976 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2035 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 2036 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 2095 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2096 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2155 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2156 accctggaggtgga 2169 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1460 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1519 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1520 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1579 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1580 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1639 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1640 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1699 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1700 actctggaggtgga 1713 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1232 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1291 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1292 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1351 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1352 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1411 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1412 gtcctccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatc 1471 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1472 accctggaggtgga 1485 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2372 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2431 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2432 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2491 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2492 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2551 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2552 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2611 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2612 accctggaggtgga 2625 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1004 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1063 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1064 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1123 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1124 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1183 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1184 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1243 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1244 accctggaggtgga 1257 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2600 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2659 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2660 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2719 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2720 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2769 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1688 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1747 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1748 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1807 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1808 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1867 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1868 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1927 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1928 accctggaggtgga 1941 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>gb|AF285161.1| Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete cds Length = 3756 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || ||||||||| || || Sbjct: 3311 agaccctgacagg-caagaccatcaccctggaggtggagcccagtgacaccattgagaat 3369 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 3370 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 3429 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| || |||||| Sbjct: 3430 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagagtcc 3489 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 3490 accctgcacctgg 3502 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || ||||||||| || || Sbjct: 3083 agaccctgacagg-caagaccatcaccctggaggtggagcccagtgacaccattgagaat 3141 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 3142 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 3201 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| || |||||| Sbjct: 3202 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagagtcc 3261 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 3262 accctgcacctgg 3274 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || ||||||||| || || Sbjct: 2627 agaccctgacagg-caagaccatcaccctggaggtggagcccagtgacaccattgagaat 2685 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2686 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2745 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| || |||||| Sbjct: 2746 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagagtcc 2805 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2806 accctgcacctgg 2818 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2855 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgagaat 2913 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2914 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2973 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| || |||||| Sbjct: 2974 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagagtcc 3033 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 3034 accctgcacctgg 3046 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2171 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccatagagaat 2229 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2230 gtcaaggcaaagatccaggacaaggagggcatctcccctgaccagcagaggctgatcttt 2289 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| || |||||| Sbjct: 2290 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagagtcc 2349 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2350 accctgcacctgg 2362 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1715 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgagaat 1773 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1774 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1833 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| || |||||| Sbjct: 1834 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagagtcc 1893 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1894 accctgcacctgg 1906 Score = 141 bits (71), Expect = 2e-30 Identities = 152/181 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || ||||||||| || || | |||||| ||| Sbjct: 2410 ggcaagaccatcaccctggaggtcgagcccagtgacaccatagagaatgtcaaggcaaag 2469 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||| | || |||||||| |||||||| Sbjct: 2470 atccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcag 2529 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || | |||||||||||||| || ||||||||||| |||||| Sbjct: 2530 ctggaagatggccgcaccctgtcagactacaacatccagaaagagtccaccctgcacctg 2589 Query: 193 g 193 | Sbjct: 2590 g 2590 Score = 135 bits (68), Expect = 1e-28 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || |||||| || || || Sbjct: 1943 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacactatagagaat 2001 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2002 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2061 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| || |||||| Sbjct: 2062 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagagtcc 2121 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2122 accctgcacctgg 2134 Score = 135 bits (68), Expect = 1e-28 Identities = 149/178 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||| || ||||||||| || || | |||||| |||||| Sbjct: 1501 aagaccatcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggcaaagatc 1560 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||| ||||||||| | || |||||||| |||||||| || Sbjct: 1561 caggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctg 1620 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || |||||||| || || | |||||||||||||| || ||||||||||| ||||||| Sbjct: 1621 gaagatggccgcaccctgtcagactacaacatccagaaagagtccaccctgcacctgg 1678 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||||||||| |||||| | ||||||||||| || |||||||||| Sbjct: 3295 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtgga 3347 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||||||||| |||||| | ||||||||||| || |||||||||| Sbjct: 3067 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtgga 3119 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||||||||| |||||| | ||||||||||| || |||||||||| Sbjct: 2611 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtgga 2663 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/47 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattgga 260 ||||||||||||||||| |||||| | ||||||||||| || ||||| Sbjct: 3523 atgcagatctttgtgaagaccctgacaggcaagaccatcaccttgga 3569 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2839 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2888 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2383 atgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggt 2432 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2155 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2204 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1927 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1976 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1699 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1748
>ref|XM_382132.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01956.1) partial mRNA Length = 366 Score = 151 bits (76), Expect = 2e-33 Identities = 154/182 (84%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 |||||||||||||||||| ||||| ||||| || |||||||||||||| | |||| | || Sbjct: 6 gggcaagaccatcaccctcgaggtcgagtcttcggacaccatcgacaatgtcaagtccaa 65 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| |||||||||||||| ||||||| |||||||| | ||||| || |||||||| Sbjct: 66 gatccaggacaaggagggcatccccccggatcagcagcgattgatcttcgccggcaagca 125 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || |||||||| || || | |||||||||||||| |||||||| ||||| ||||| Sbjct: 126 gctcgaggatggccgaaccctctccgactacaacatccagaaggagtctaccctccacct 185 Query: 192 gg 193 || Sbjct: 186 gg 187
>emb|X07452.1|TCUBIFUS Trypanosoma mRNA for FUS gene (ubiquitin fusion) Length = 536 Score = 151 bits (76), Expect = 2e-33 Identities = 127/146 (86%) Strand = Plus / Plus Query: 46 gacaccatcgacaacgacaaggcgaagatccangacaaggagggcattnccccggaccag 105 |||||||| || |||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 143 gacaccattgagaacgtgaaggcgaagatccaggacaaggagggcattccaccggaccag 202 Query: 106 cagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgactacaac 165 ||||| || ||||||||||||||||| || || || ||||| || ||||| ||||||||| Sbjct: 203 cagcgcctgatctttgctggcaagcagctggaggacggccgcacgcttgcagactacaac 262 Query: 166 atccanaaggagtccaccctncacct 191 ||||| ||||||||||| || ||||| Sbjct: 263 atccagaaggagtccacgctgcacct 288 Score = 50.1 bits (25), Expect = 0.005 Identities = 32/35 (91%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagac 248 ||||||||||||||||| || ||| |||||||||| Sbjct: 83 atgcagatctttgtgaagacactgacgggcaagac 117
>dbj|AB226314.1| Aspergillus oryzae cDNA, contig sequence: AoEST3176 Length = 955 Score = 151 bits (76), Expect = 2e-33 Identities = 158/186 (84%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| || |||||||| ||||| | |||| | |||||| Sbjct: 319 aagactatcaccctcgaggtggagtcttcggacaccattgacaatgtcaagtccaagatc 378 Query: 76 can-gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanct 134 || | ||||||||| || |||| |||||||||||||| ||||| ||||||||||| || Sbjct: 379 cagcgccaaggagggaatcccccctgaccagcagcgtctgatcttcgctggcaagcagct 438 Query: 135 tgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgga 194 || || |||||||| ||| |||||||||||||||| |||||||||||||| ||||| | Sbjct: 439 cgaggacggccgtactctttctgactacaacatccagaaggagtccacccttcacctcgt 498 Query: 195 gctccg 200 |||||| Sbjct: 499 gctccg 504
>gb|DQ066288.1| Ixodes scapularis isolate is-all-426 ubiquitin/ribosomal protein S27a fusion protein mRNA, complete cds Length = 471 Score = 151 bits (76), Expect = 2e-33 Identities = 154/182 (84%) Strand = Plus / Plus Query: 12 gggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaa 71 ||||||||||||||| |||||||| ||| || ||| |||||||| || | |||||| || Sbjct: 27 gggcaagaccatcactcttgaggtcgagcccagtgataccatcgaaaatgtcaaggccaa 86 Query: 72 gatccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagca 131 |||||| |||||||||||||| |||| |||||||||||||| |||||||| |||||||| Sbjct: 87 gatccaagacaaggagggcatcccccccgaccagcagcgtctgatctttgcgggcaagca 146 Query: 132 ncttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacct 191 || || ||||| || || || | |||||||||||||| |||||||| ||||| ||||| Sbjct: 147 gctggaggatgggcgcaccctgtcggactacaacatccagaaggagtcgaccctccacct 206 Query: 192 gg 193 || Sbjct: 207 gg 208 Score = 48.1 bits (24), Expect = 0.020 Identities = 34/38 (89%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| || || ||||||||||||| Sbjct: 1 atgcagatctttgtgaaaactctcacgggcaagaccat 38
>ref|NM_017314.1| Rattus norvegicus ubiquitin C (Ubc), mRNA Length = 2545 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2102 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 2160 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2161 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2220 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2221 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2280 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2281 accctgcacctgg 2293 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1874 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1932 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1933 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1992 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1993 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2052 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2053 accctgcacctgg 2065 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1646 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1704 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1705 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1764 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1765 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1824 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1825 accctgcacctgg 1837 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1418 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1476 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1477 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1536 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1537 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1596 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1597 accctgcacctgg 1609 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1190 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1248 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1249 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1308 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1309 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1368 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1369 accctgcacctgg 1381 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 962 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1020 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1021 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1080 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1081 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1140 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1141 accctgcacctgg 1153 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 734 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 792 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 793 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 852 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 853 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 912 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 913 accctgcacctgg 925 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 506 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 564 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 565 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 624 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 625 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 684 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 685 accctgcacctgg 697 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 278 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 336 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 337 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 396 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 397 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 456 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 457 accttgcacctgg 469 Score = 143 bits (72), Expect = 5e-31 Identities = 150/178 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||| || ||||||||| || || | |||||| |||||| Sbjct: 64 aagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggcaaagatc 123 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||| ||||||||| | || |||||||| |||||||| || Sbjct: 124 caggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctg 183 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || |||||||| || || | |||||||||||||| |||||||||||||| ||||||| Sbjct: 184 gaagatggccgcaccctgtcagactacaacatccagaaggagtccaccctgcacctgg 241 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2314 atgcagatctttgtgaagaccctgacaggcaagaccatcactctggaggt 2363 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2086 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2135 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1858 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1907 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1630 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1679 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1402 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1451 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1174 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1223 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 946 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 995 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 718 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 767 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 490 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 539 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 262 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 311
>gb|AY190601.1| Malus x domestica ubiquitin/ribosomal fusion protein mRNA, complete cds Length = 729 Score = 151 bits (76), Expect = 2e-33 Identities = 151/178 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||||| || ||| |||||||||| | |||||| |||||| Sbjct: 91 aagaccatcaccctagaggtcgagtcttccgactccatcgacaatgtcaaggccaagatc 150 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||| |||||| | |||||||||||||| ||||| || || |||||||| || Sbjct: 151 caagacaaggaaggcattccgccggaccagcagcgcctcattttcgccggcaagcagctc 210 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || || ||| || || ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 211 gaggacaaccgcaccctcgctgactacaacatccagaaggagtccaccctccacctgg 268 Score = 40.1 bits (20), Expect = 5.0 Identities = 33/38 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||| ||||| ||||| |||| |||||||| Sbjct: 61 atgcagatcttcgtgaaaaccctaacgggtaagaccat 98
>dbj|AB098769.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS11653 Length = 486 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 357 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 299 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 298 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 239 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 238 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 179 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 178 accctgcacctgg 166 Score = 87.7 bits (44), Expect = 2e-14 Identities = 162/208 (77%) Strand = Plus / Minus Query: 101 accagcagcgtctcatctttgctggcaagcancttgangatggccgtacacttgctgact 160 |||||||| | ||||||||||| |||||||| || || |||||||| || ||| |||| | Sbjct: 486 accagcagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgatt 427 Query: 161 acaacatccanaaggagtccaccctncacctggagctccgncttcnnnnnnnnatgcaga 220 |||||||||| || ||||| ||||| ||||||| ||||| || ||||||| Sbjct: 426 acaacatccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcaga 367 Query: 221 tctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctggacacca 280 |||| ||||| |||||| | ||||||||||| || |||| ||||| | ||||||| Sbjct: 366 tcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacacca 307 Query: 281 tccacancgtnaaggcgaagatccagga 308 || | | ||| ||||| ||||||||||| Sbjct: 306 tcgagaacgtgaaggccaagatccagga 279
>dbj|D17296.1|RATPILP Rattus norvegicus mRNA for polyubiquitin, complete cds, ten completely repetitive ubiquitins in tandem and one ubiguitin-like protein Length = 2545 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 2102 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 2160 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 2161 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 2220 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 2221 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2280 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2281 accctgcacctgg 2293 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1874 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1932 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1933 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1992 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1993 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 2052 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 2053 accctgcacctgg 2065 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1646 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1704 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1705 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1764 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1765 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1824 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1825 accctgcacctgg 1837 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1418 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1476 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1477 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1536 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1537 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1596 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1597 accctgcacctgg 1609 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 1190 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1248 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1249 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1308 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1309 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1368 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1369 accctgcacctgg 1381 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 962 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1020 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1021 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1080 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1081 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1140 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1141 accctgcacctgg 1153 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 734 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 792 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 793 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 852 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 853 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 912 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 913 accctgcacctgg 925 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 506 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 564 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 565 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 624 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 625 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 684 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 685 accctgcacctgg 697 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 278 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 336 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 337 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 396 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 397 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 456 Query: 181 accctncacctgg 193 ||| | ||||||| Sbjct: 457 accttgcacctgg 469 Score = 143 bits (72), Expect = 5e-31 Identities = 150/178 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||| || ||||||||| || || | |||||| |||||| Sbjct: 64 aagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggcaaagatc 123 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||| ||||||||| | || |||||||| |||||||| || Sbjct: 124 caggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctg 183 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || |||||||| || || | |||||||||||||| |||||||||||||| ||||||| Sbjct: 184 gaagatggccgcaccctgtcagactacaacatccagaaggagtccaccctgcacctgg 241 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2314 atgcagatctttgtgaagaccctgacaggcaagaccatcactctggaggt 2363 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 2086 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 2135 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1858 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1907 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1630 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1679 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1402 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1451 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 1174 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1223 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 946 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 995 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 718 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 767 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 490 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 539 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 262 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 311
>gb|BC103477.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone MGC:124622 IMAGE:7929586), complete cds Length = 1501 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 987 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 1045 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 1046 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 1105 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 1106 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 1165 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1166 accctgcacctgg 1178 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 759 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 817 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 818 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 877 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 878 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 937 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 938 accctgcacctgg 950 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 531 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 589 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 590 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 649 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 650 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 709 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 710 accctgcacctgg 722 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||| ||| || ||||||||| || || Sbjct: 303 agaccctgacagg-caagaccatcaccctggaggtcgagcccagtgacaccattgaaaat 361 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | |||||| |||||||| |||||||||||||| |||| ||||||||| | || |||||| Sbjct: 362 gtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatcttt 421 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || | |||||||||||||| ||||||||| Sbjct: 422 gcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaggagtcc 481 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 482 accctgcacctgg 494 Score = 135 bits (68), Expect = 1e-28 Identities = 149/178 (83%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||||||||| ||||| ||| || ||||||||| || || | |||||| |||||| Sbjct: 89 aagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgtcaaggcaaagatc 148 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || |||||||||||||| |||| ||||||||| | || |||||||| |||||||| || Sbjct: 149 caggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctg 208 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctgg 193 || |||||||| || || | |||||||||||||| |||||||||||| | ||||||| Sbjct: 209 gaagatggccgcaccctgtcagactacaacatccagaaggagtccaccttgcacctgg 266 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 971 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 1020 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 743 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 792 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 515 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 564 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| |||||| | ||||||||||| || ||||||| Sbjct: 287 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggt 336 Score = 56.0 bits (28), Expect = 8e-05 Identities = 35/38 (92%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccat 251 ||||||||||||||||| |||||| | ||||||||||| Sbjct: 1199 atgcagatctttgtgaagaccctgacaggcaagaccat 1236
>gb|M62431.1|BVDCP1 Bovine viral diarrhea virus CP1 putative helcase/protease mRNA, partial cds Length = 5688 Score = 151 bits (76), Expect = 2e-33 Identities = 163/193 (84%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| || |||||| || |||||||||||| ||| Sbjct: 2984 agaccctgaccgg-caagaccatcaccctggaagtggagcccagtgacaccatcgagaac 3042 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || ||||| |||||| |||| ||||||||| | ||||||||| Sbjct: 3043 gtgaaggccaagatccaggataaggaaggcattccccctgaccagcagaggctcatcttt 3102 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || ||| |||| ||||||||||| || ||||| Sbjct: 3103 gccggcaagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcg 3162 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 3163 accctgcacctgg 3175 Score = 103 bits (52), Expect = 4e-19 Identities = 178/227 (78%) Strand = Plus / Plus Query: 82 aaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgangat 141 ||||| |||||| |||| ||||||||| | ||||||||||| |||||||| || || ||| Sbjct: 2836 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 2895 Query: 142 ggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctccgn 201 ||||| || ||| |||| ||||||||||| || ||||| ||||| ||||||| ||||| Sbjct: 2896 ggccgcactctttctgattacaacatccagaaagagtcgaccctgcacctggtcctccgt 2955 Query: 202 cttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattggag 261 || ||||||||||| ||||| |||||| | ||||||||||| || |||| Sbjct: 2956 ctgaggggtggtatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaa 3015 Query: 262 gtggantncctggacaccatccacancgtnaaggcgaagatccagga 308 ||||| | ||||||||| | | ||| ||||| ||||||||||| Sbjct: 3016 gtggagcccagtgacaccatcgagaacgtgaaggccaagatccagga 3062
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 149 bits (75), Expect = 7e-33 Identities = 245/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 373 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 431 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 432 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 491 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 492 gccggcaagcagctggaagatggccgcaccctccctgattacaacatccagaaagagtca 551 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 552 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgact 611 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 612 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 671 Query: 301 atccagga 308 |||||||| Sbjct: 672 atccagga 679 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 601 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 659 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 660 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 719 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 720 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 779 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 780 accctgcacctgg 792 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 145 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 203 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 204 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 263 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 264 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 323 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 324 accctgcacctgg 336 Score = 111 bits (56), Expect = 2e-21 Identities = 158/193 (81%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||| | ||||||||| || || ||||||||| || Sbjct: 829 agaccctgaccgg-caagaccatcaccttggaggtggagcccagtgtcaccatcgagaat 887 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 888 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 947 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 948 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 1007 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 1008 accctgcacctgg 1020 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 813 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtgga 865 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 357 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 416 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 417 gacaccatcgagaacgtgaaggccaagatccagga 451 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 129 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 188 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 189 gacaccatcgagaacgtgaaggccaagatccagga 223
>ref|XM_875335.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 21 (UBC), mRNA Length = 2659 Score = 149 bits (75), Expect = 7e-33 Identities = 153/181 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 776 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 835 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 836 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 895 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 896 ctggaagatggccgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 955 Query: 193 g 193 | Sbjct: 956 g 956 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1931 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1990 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1991 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2050 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2051 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2110 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2111 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2170 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2171 actctggaggtgga 2184 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1703 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1762 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1763 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1822 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 1823 ctggaagatgggcgcaccctgtctgactacaacatccagaaggagtccactctgcacctg 1882 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1883 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1942 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1943 accctggaggtgga 1956 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1247 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1306 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1307 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1366 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1367 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1426 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1427 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1486 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1487 actctggaggtgga 1500 Score = 143 bits (72), Expect = 5e-31 Identities = 204/254 (80%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 548 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 607 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 608 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 667 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 668 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 727 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 728 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 787 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 788 accctggaggtgga 801 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2159 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2218 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2219 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2278 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || |||||||| || || |||||||||||||||| || |||||||| || |||||| Sbjct: 2279 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 2338 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 2339 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 2398 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 2399 accctggaggtgga 2412 Score = 135 bits (68), Expect = 1e-28 Identities = 200/250 (80%) Strand = Plus / Plus Query: 17 agaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatcc 76 ||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||||||| Sbjct: 1023 agaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatcc 1082 Query: 77 angacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttg 136 | ||||| |||||||| |||| ||||||||| | || |||||||| || || || || | Sbjct: 1083 aagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctgg 1142 Query: 137 angatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagc 196 | |||||||| || || |||||||||||||||| || |||||||| || ||||||| | Sbjct: 1143 aagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcc 1202 Query: 197 tccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacat 256 |||| || ||||||||||| ||||| ||| || | ||||||||||| || Sbjct: 1203 tccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatcaccc 1262 Query: 257 tggaggtgga 266 |||||||||| Sbjct: 1263 tggaggtgga 1272 Score = 135 bits (68), Expect = 1e-28 Identities = 203/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 320 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 379 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 380 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 439 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 440 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 499 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 500 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 559 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 560 accctggaggtgga 573 Score = 133 bits (67), Expect = 4e-28 Identities = 143/170 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 2387 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 2446 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 2447 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 2506 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccac 182 || || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 2507 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccac 2556 Score = 127 bits (64), Expect = 3e-26 Identities = 202/254 (79%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 |||||||||||||| || ||||||||| || |||||||||||| |||| |||||| ||| Sbjct: 1475 ggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaag 1534 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| ||||| |||||||| |||| ||||||||| | || |||||||| || || || Sbjct: 1535 atccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacag 1594 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| || |||||||| || |||||| Sbjct: 1595 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctg 1654 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | ||||| || ||||||||||| ||||| ||| || | ||||||||||| Sbjct: 1655 gtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatc 1714 Query: 253 acattggaggtgga 266 || |||||||||| Sbjct: 1715 accctggaggtgga 1728 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/248 (78%) Strand = Plus / Plus Query: 19 accatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatccan 78 |||||||| || ||||||||| || |||||||||||| |||| ||||| |||||| || Sbjct: 98 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggggaagatacaa 157 Query: 79 gacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcancttgan 138 || || || ||||| |||| ||||||||| | || |||||||| || || || || || Sbjct: 158 gaaaaagaaggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaa 217 Query: 139 gatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggagctc 198 |||||||| || || |||||||||||||||| || |||||||| || ||||||| ||| Sbjct: 218 gatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctc 277 Query: 199 cgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatnacattg 258 || || ||||||||||| ||||| ||| || | ||||||||||| || || Sbjct: 278 cgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctg 337 Query: 259 gaggtgga 266 |||||||| Sbjct: 338 gaggtgga 345 Score = 40.1 bits (20), Expect = 5.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccct 236 ||||||||||||||||| ||||| Sbjct: 65 atgcagatctttgtgaagaccct 87
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 149 bits (75), Expect = 7e-33 Identities = 245/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 344 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 402 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 403 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 462 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 463 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 522 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 523 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgact 582 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 583 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 642 Query: 301 atccagga 308 |||||||| Sbjct: 643 atccagga 650 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 572 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 630 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 631 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 690 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 691 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 750 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 751 accctgcacctgg 763 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 116 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 174 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 175 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 234 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 235 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 294 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 295 accctgcacctgg 307 Score = 119 bits (60), Expect = 7e-24 Identities = 159/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||| | ||||||||| || |||||||||||| || Sbjct: 800 agaccctgaccgg-caagaccatcaccttggaggtggagcccagtgacaccatcgagaat 858 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 859 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 918 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 919 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 978 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 979 accctgcacctgg 991 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtgga 836 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccagga 422 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccagga 194
>ref|XM_753494.1| Ustilago maydis 521 hypothetical protein (UM02440.1) partial mRNA Length = 387 Score = 149 bits (75), Expect = 7e-33 Identities = 156/185 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 |||||||| |||||||||||||||||||| |||||||||||||| | |||||| ||||| Sbjct: 31 aagaccattacccttgaggtggagtcctcggacaccatcgacaatgtcaaggccaagatt 90 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| ||| |||| ||||||||||| || ||||| || || ||||| || Sbjct: 91 caggacaaggagggtattccccccgaccagcagcgcctgatcttcgccggtaagcagctc 150 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || |||||||| || || | |||||||||||||| ||||| || ||||| ||||| | | Sbjct: 151 gaggatggccgcaccctctcggactacaacatccagaaggaatcgaccctccaccttgtg 210 Query: 196 ctccg 200 ||||| Sbjct: 211 ctccg 215
>ref|XM_749400.1| Aspergillus fumigatus Af293 ubiquitin UbiC (Afu3g11260) partial mRNA Length = 465 Score = 149 bits (75), Expect = 7e-33 Identities = 156/185 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||| |||||||| ||||||||||| || |||||||| ||||| | |||| | |||||| Sbjct: 31 aagactatcaccctcgaggtggagtcttcggacaccattgacaatgtcaagtccaagatc 90 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||||||||| || |||| |||||||||||||| ||||| ||||||||||| || Sbjct: 91 caggacaaggagggaatcccccccgaccagcagcgtctgatcttcgctggcaagcagctc 150 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || || || ||||| || |||||||||||||||| |||||||| ||||| ||||| | | Sbjct: 151 gaggacggtcgtaccctctctgactacaacatccagaaggagtcgaccctgcacctcgtg 210 Query: 196 ctccg 200 ||||| Sbjct: 211 ctccg 215
>gb|AF361365.1| Oncorhynchus mykiss polyubiquitin mRNA, complete cds Length = 1162 Score = 149 bits (75), Expect = 7e-33 Identities = 153/181 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || |||||||||||| |||| |||||| ||| Sbjct: 768 ggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaacgtcaaggccaag 827 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| | ||||| ||||| ||||| Sbjct: 828 atccaggacaaggagggcatccccccagaccagcagcgcttgatcttcgctggtaagcag 887 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || |||||||||||||||| ||||||||||| || |||||| Sbjct: 888 ctggaagatggtcgcacgctctctgactacaacatccagaaggagtccactcttcacctg 947 Query: 193 g 193 | Sbjct: 948 g 948 Score = 127 bits (64), Expect = 3e-26 Identities = 234/298 (78%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || ||||||||| || || | ||||| ||| Sbjct: 540 ggcaagaccatcaccctggaggttgagcccagtgacaccattgagaatgtgaaggccaag 599 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| | |||||||| |||||||| Sbjct: 600 atccaggacaaggagggcatccccccagaccagcagcgcttgatctttgccggcaagcag 659 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctg 192 || || ||||| || || || | |||||||||||||| |||||||||||||| || || Sbjct: 660 ctggaagatggtcgcactctctccgactacaacatccagaaggagtccaccctccatctt 719 Query: 193 gagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncgggcaagaccatn 252 | |||||| || ||||||||||| ||||| ||||| | ||||||||||| Sbjct: 720 gtgctccgtctgaggggaggtatgcagatcttcgtgaagacccttaccggcaagaccatc 779 Query: 253 acattggaggtggantncctggacaccatccacancgtnaaggcgaagatccaggaca 310 || ||||||| || | ||||||||| | | ||| ||||| ||||||||||||| Sbjct: 780 accctggaggtcgagcccagtgacaccatcgagaacgtcaaggccaagatccaggaca 837 Score = 123 bits (62), Expect = 4e-25 Identities = 144/173 (83%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || ||||||||| || || | ||||| ||| Sbjct: 312 ggcaagaccatcaccctggaggttgagcccagtgacaccattgagaatgtgaaggccaag 371 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| | |||||||| |||||||| Sbjct: 372 atccaggacaaggagggcatccccccagaccagcagcgcttgatctttgccggcaagcag 431 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 || || ||||| || || || | |||||||||||||| |||||||||||||| Sbjct: 432 ctggaagatggtcgcactctctccgactacaacatccagaaggagtccaccct 484 Score = 107 bits (54), Expect = 3e-20 Identities = 142/173 (82%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||||| ||||| ||| || |||||||||||| || | ||||| ||| Sbjct: 84 ggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtgaaggccaag 143 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 ||||| |||||||||||||| |||| ||||||||||| | ||||| || || ||||| Sbjct: 144 atccaggacaaggagggcatccccccagaccagcagcgcttgatcttcgccggtaagcag 203 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccct 185 || || ||||| || || || | ||||| |||||||| |||||||||||||| Sbjct: 204 ctggaagatggtcgcactctctccgactataacatccagaaggagtccaccct 256 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/50 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||| ||||| ||||| | ||||||||||| || ||||||| Sbjct: 513 atgcagatcttcgtgaagacccttaccggcaagaccatcaccctggaggt 562 Score = 42.1 bits (21), Expect = 1.3 Identities = 42/50 (84%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||||||||| || || | ||||||||||| || ||||||| Sbjct: 57 atgcagatctttgtgaagacacttaccggcaagaccatcaccctggaggt 106
>emb|Y12082.1|SDPOLUBQ2 Suberites domuncula mRNA for polyubiquitin precursor, partial Length = 670 Score = 149 bits (75), Expect = 7e-33 Identities = 156/185 (84%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||| ||||| || || | |||||||||||||| |||| |||||| |||||| Sbjct: 13 aagaccatcactcttgaagtcgaagcttctgacaccatcgaaaacgtcaaggctaagatc 72 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || ||||| || || ||| |||| || ||||||||||| ||||||||||| ||||| ||| Sbjct: 73 caggacaaagaaggaattcccccagatcagcagcgtcttatctttgctggaaagcaactt 132 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || |||||||| || ||| | |||||||||||||| || ||||||||||| ||| ||| | Sbjct: 133 gaagatggccgcactctttccgactacaacatccagaaagagtccacccttcacttggtg 192 Query: 196 ctccg 200 ||||| Sbjct: 193 ctccg 197 Score = 117 bits (59), Expect = 3e-23 Identities = 152/185 (82%) Strand = Plus / Plus Query: 16 aagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaagatc 75 ||||||||||||||||| ||||| | ||||||||||| || |||| |||||| |||||| Sbjct: 241 aagaccatcacccttgaagtggaagcttctgacaccattgagaacgtcaaggccaagatc 300 Query: 76 cangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcanctt 135 || || ||||| || ||| | || ||||| || |||||||| || ||||||||||| || Sbjct: 301 caagataaggaaggtattccaccagaccaacaacgtctcattttcgctggcaagcagctc 360 Query: 136 gangatggccgtacacttgctgactacaacatccanaaggagtccaccctncacctggag 195 || ||||| || || || | |||||||||||||| || ||||||||||| ||| ||| | Sbjct: 361 gaagatggtcgcactctgtccgactacaacatccagaaagagtccacccttcacttggtg 420 Query: 196 ctccg 200 ||||| Sbjct: 421 ctccg 425
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 149 bits (75), Expect = 7e-33 Identities = 245/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 298 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 356 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 357 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 416 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 417 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 476 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 477 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgact 536 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 537 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 596 Query: 301 atccagga 308 |||||||| Sbjct: 597 atccagga 604 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 526 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 584 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 585 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 644 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 645 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 704 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 705 accctgcacctgg 717 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 70 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 128 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 129 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 188 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 189 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 248 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 249 accctgcacctgg 261 Score = 119 bits (60), Expect = 7e-24 Identities = 159/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||| | ||||||||| || |||||||||||| || Sbjct: 754 agaccctgaccgg-caagaccatcaccttggaggtggagcccagtgacaccatcgagaat 812 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 813 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 872 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 873 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 932 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 933 accctgcacctgg 945 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 738 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtgga 790 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 282 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 341 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 342 gacaccatcgagaacgtgaaggccaagatccagga 376 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 54 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 113 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 114 gacaccatcgagaacgtgaaggccaagatccagga 148
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 149 bits (75), Expect = 7e-33 Identities = 245/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 121761 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 121703 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 121702 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 121643 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 121642 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 121583 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 121582 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgact 121523 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 121522 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 121463 Query: 301 atccagga 308 |||||||| Sbjct: 121462 atccagga 121455 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 121989 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 121931 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 121930 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 121871 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 121870 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 121811 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 121810 accctgcacctgg 121798 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 121533 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 121475 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 121474 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 121415 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 121414 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 121355 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 121354 accctgcacctgg 121342 Score = 119 bits (60), Expect = 7e-24 Identities = 159/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||| | ||||||||| || |||||||||||| || Sbjct: 121305 agaccctgaccgg-caagaccatcaccttggaggtggagcccagtgacaccatcgagaat 121247 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 121246 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 121187 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 121186 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 121127 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 121126 accctgcacctgg 121114 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 121321 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtgga 121269 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 121777 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 121718 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 121717 gacaccatcgagaacgtgaaggccaagatccagga 121683 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Minus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 122005 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 121946 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 121945 gacaccatcgagaacgtgaaggccaagatccagga 121911
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 149 bits (75), Expect = 7e-33 Identities = 245/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 344 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 402 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 403 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 462 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 463 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 522 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 523 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgact 582 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 583 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 642 Query: 301 atccagga 308 |||||||| Sbjct: 643 atccagga 650 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 572 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 630 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 631 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 690 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 691 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 750 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 751 accctgcacctgg 763 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 116 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 174 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 175 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 234 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 235 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 294 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 295 accctgcacctgg 307 Score = 119 bits (60), Expect = 7e-24 Identities = 159/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||| | ||||||||| || |||||||||||| || Sbjct: 800 agaccctgaccgg-caagaccatcaccttggaggtggagcccagtgacaccatcgagaat 858 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 859 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 918 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 919 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 978 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 979 accctgcacctgg 991 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtgga 836 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccagga 422 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccagga 194
>gb|AF056623.1|AF056623 Magnaporthe grisea strain Guy-11 ubiquitin fusion protein (UEP1) mRNA, complete cds Length = 620 Score = 149 bits (75), Expect = 7e-33 Identities = 150/177 (84%) Strand = Plus / Plus Query: 13 ggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaacgacaaggcgaag 72 ||||||||||||||| | ||||| |||||||| ||||| |||||||| | ||| | ||| Sbjct: 37 ggcaagaccatcaccttggaggtcgagtcctcggacacgatcgacaatgtgaagtccaag 96 Query: 73 atccangacaaggagggcattnccccggaccagcagcgtctcatctttgctggcaagcan 132 || || ||||||||||| ||| |||||||||| |||||||| ||||||||||||||||| Sbjct: 97 attcaggacaaggagggaattcccccggaccaacagcgtcttatctttgctggcaagcag 156 Query: 133 cttgangatggccgtacacttgctgactacaacatccanaaggagtccaccctncac 189 || || || |||||||| || | |||||||||||||| |||||||| ||||| ||| Sbjct: 157 ctggaggacggccgtactctctccgactacaacatccagaaggagtcgaccctccac 213 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/50 (86%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggt 263 ||||||||||| ||||| || ||| | ||||||||||| || |||||||| Sbjct: 10 atgcagatcttcgtgaagactctgactggcaagaccatcaccttggaggt 59
>dbj|AK165313.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012C16 product:ubiquitin B, full insert sequence Length = 1159 Score = 149 bits (75), Expect = 7e-33 Identities = 245/308 (79%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 343 agaccctgaccgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 401 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 402 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 461 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 462 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtca 521 Query: 181 accctncacctggagctccgncttcnnnnnnnnatgcagatctttgtgaanaccctgncg 240 ||||| ||||||| ||||| || ||||||||||| ||||| |||||| | Sbjct: 522 accctgcacctggtcctccgtctgaggggtggcatgcagatcttcgtgaagaccctgact 581 Query: 241 ggcaagaccatnacattggaggtggantncctggacaccatccacancgtnaaggcgaag 300 ||||||||||| || |||||||||| | ||||||||| | | ||| ||||| ||| Sbjct: 582 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 641 Query: 301 atccagga 308 |||||||| Sbjct: 642 atccagga 649 Score = 143 bits (72), Expect = 5e-31 Identities = 162/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 571 agaccctgactgg-caagaccatcaccctggaggtggagcccagtgacaccatcgagaac 629 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 630 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 689 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| |||||||| Sbjct: 690 gccggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtca 749 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 750 accctgcacctgg 762 Score = 135 bits (68), Expect = 1e-28 Identities = 162/193 (83%), Gaps = 2/193 (1%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||||| ||||||||| || |||||||||||| ||| Sbjct: 116 agaccctgaccgg-caagaccatcaccctagaggtggagcccagtgacaccatcgagaac 174 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 175 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 234 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| | ||| |||||||| || || |||| ||||||||||| |||||||| Sbjct: 235 gccggcaagcagc-tgaagatggccgcaccctctctgattacaacatccagaaggagtca 293 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 294 accctgcacctgg 306 Score = 111 bits (56), Expect = 2e-21 Identities = 158/193 (81%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 1 agaccctgacngggcaagaccatcacccttgaggtggagtcctctgacaccatcgacaac 60 |||||||||| || ||||||||||||| | ||||||||| || ||||||||||| || Sbjct: 799 agaccctgaccgg-caagaccatcaccttggaggtggagcccagagacaccatcgagaat 857 Query: 61 gacaaggcgaagatccangacaaggagggcattnccccggaccagcagcgtctcatcttt 120 | ||||| |||||||| || || |||||||| |||| ||||||||| | || |||||| Sbjct: 858 gtgaaggccaagatccaggataaagagggcatcccccctgaccagcagaggctgatcttt 917 Query: 121 gctggcaagcancttgangatggccgtacacttgctgactacaacatccanaaggagtcc 180 || |||||||| || || |||||||| || || |||| ||||||||||| || ||||| Sbjct: 918 gccggcaagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcg 977 Query: 181 accctncacctgg 193 ||||| ||||||| Sbjct: 978 accctgcacctgg 990 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/53 (88%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtgga 266 ||||||||||| ||||| |||||| | ||||||||||| || ||||||||||| Sbjct: 783 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtgga 835 Score = 60.0 bits (30), Expect = 5e-06 Identities = 77/95 (81%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || |||||||||| | Sbjct: 327 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 386 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 387 gacaccatcgagaacgtgaaggccaagatccagga 421 Score = 52.0 bits (26), Expect = 0.001 Identities = 76/95 (80%) Strand = Plus / Plus Query: 214 atgcagatctttgtgaanaccctgncgggcaagaccatnacattggaggtggantncctg 273 ||||||||||| ||||| |||||| | ||||||||||| || | |||||||| | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 274 gacaccatccacancgtnaaggcgaagatccagga 308 ||||||||| | | ||| ||||| ||||||||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccagga 194 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,581,665 Number of Sequences: 3902068 Number of extensions: 1581665 Number of successful extensions: 37038 Number of sequences better than 10.0: 2322 Number of HSP's better than 10.0 without gapping: 2312 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 25195 Number of HSP's gapped (non-prelim): 10208 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
