ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2p10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1118 bits (564), Expect = 0.0 Identities = 585/590 (99%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120041 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 119983 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119982 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 119923 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119922 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 119863 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119862 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 119803 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119802 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 119743 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119742 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 119683 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119682 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 119623 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119622 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 119563 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 119562 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 119504 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119503 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 119454 Score = 1118 bits (564), Expect = 0.0 Identities = 585/590 (99%), Gaps = 2/590 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94853 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 94911 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94912 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 94971 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94972 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 95031 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95032 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 95091 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95092 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 95151 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95152 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 95211 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95212 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95271 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95272 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 95331 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95332 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 95390 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95391 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 95440
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 894 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 893 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 834 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 774 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 714 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 654 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 653 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 594 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 534 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 474 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 473 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 415 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 365
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44866 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 44808 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44807 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 44748 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44747 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 44688 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44687 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 44628 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44627 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 44568 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 44567 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 44508 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44507 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 44448 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44447 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 44388 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 44387 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 44329 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44328 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 44279 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20252 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 20310 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20311 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 20370 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20371 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 20430 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20431 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 20490 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20491 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 20550 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20551 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 20610 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20611 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 20670 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20671 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 20730 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 20731 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 20789 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20790 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 20839
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1495 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 1437 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1436 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 1377 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1376 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 1317 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 1257 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1256 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 1197 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1196 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 1137 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 1077 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 1017 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1016 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 958 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 908
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123705 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 123647 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123646 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 123587 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123586 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 123527 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123526 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 123467 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123466 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 123407 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123406 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 123347 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123346 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 123287 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123286 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 123227 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123226 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 123168 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123167 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 123118 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99132 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 99190 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99191 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 99250 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99251 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 99310 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99311 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 99370 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99371 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 99430 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99431 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 99490 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99491 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 99550 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99551 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 99610 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 99611 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 99669 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99670 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 99719
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124422 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 124364 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124363 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 124304 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124303 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 124244 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124243 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 124184 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124183 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 124124 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124123 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 124064 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124063 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 124004 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124003 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 123944 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123943 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 123885 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123884 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 123835 Score = 1110 bits (560), Expect = 0.0 Identities = 584/590 (98%), Gaps = 2/590 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99809 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 99867 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99868 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 99927 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99928 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 99987 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99988 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 100047 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100048 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 100107 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 100108 ctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 100167 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100168 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 100227 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100228 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 100287 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100288 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctc 100346 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100347 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 100396
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118808 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 118749 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118748 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 118689 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118688 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 118629 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118628 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 118569 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118568 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 118509 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118508 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 118449 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118448 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 118389 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118388 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 118329 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118328 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 118270 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 118269 tgaagaatgagccggcgactcataggcagtggctt 118235
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119533 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119532 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119473 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119413 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119412 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 119354 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 119353 tgaagaatgagccggcgactcataggcagtggctt 119319 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95623 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95683 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95743 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95744 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 95802 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 95803 tgaagaatgagccggcgactcataggcagtggctt 95837
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119892 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119833 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119832 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119773 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119772 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119713 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119712 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119653 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119652 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119593 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119592 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119533 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119532 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119473 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119472 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119413 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119412 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 119354 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 119353 tgaagaatgagccggcgactcataggcagtggctt 119319 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95323 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95324 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95383 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95443 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95503 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95504 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95563 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95564 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95623 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95683 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95684 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95743 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95744 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 95802 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 95803 tgaagaatgagccggcgactcataggcagtggctt 95837
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119841 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119782 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119781 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119722 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119721 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119662 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119602 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119601 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119542 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119541 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119482 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119481 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119422 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119421 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119362 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119361 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 119303 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 119302 tgaagaatgagccggcgactcataggcagtggctt 119268 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95209 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95268 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95269 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95328 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95329 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95388 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95389 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95448 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95449 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95508 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95509 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95568 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95569 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95628 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95629 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95688 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95689 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 95747 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 95748 tgaagaatgagccggcgactcataggcagtggctt 95782
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507842 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31507901 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31507902 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31507961 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507962 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31508021 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508022 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31508081 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508082 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31508141 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31508142 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 31508201 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508202 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 31508261 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508262 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 31508321 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31508322 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 31508380 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 31508381 tgaagaatgagccggcgactcataggcagtggctt 31508415
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84754 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84695 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84694 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 84635 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84634 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 84575 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84574 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 84515 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84514 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 84455 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 84454 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 84395 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84394 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 84335 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84334 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 84275 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 84274 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 84216 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 84215 tgaagaatgagccggcgactcataggcagtggctt 84181
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119861 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119802 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119801 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119742 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119741 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119682 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119681 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119622 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119621 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119562 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119561 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119502 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119501 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119442 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119441 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119382 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119381 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 119323 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 119322 tgaagaatgagccggcgactcataggcagtggctt 119288 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95257 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95316 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95317 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95376 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95377 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95436 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95437 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95496 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95497 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95556 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95557 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95616 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95617 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95676 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95677 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95736 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95737 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 95795 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 95796 tgaagaatgagccggcgactcataggcagtggctt 95830
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122306 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 122365 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122366 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 122425 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122426 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 122485 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122486 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 122545 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122546 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 122605 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122606 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 122665 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122666 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 122725 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122726 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 122785 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122786 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 122844 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 122845 tgaagaatgagccggcgactcataggcagtggctt 122879 Score = 1100 bits (555), Expect = 0.0 Identities = 571/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14031 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 14090 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14091 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 14150 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14151 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 14210 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14211 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 14270 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14271 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 14330 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14331 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 14390 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14391 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 14450 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14451 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 14510 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14511 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 14569 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 14570 tgaagaatgagccggcgactcataggcagtggctt 14604
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58580 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 58521 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58520 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 58461 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58460 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 58401 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58400 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 58341 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58340 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 58281 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58280 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 58221 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58220 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 58161 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58160 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 58101 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 58100 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 58042 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 58041 tgaagaatgagccggcgactcataggcagtggctt 58007
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268191 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9268250 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268251 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9268310 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268311 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9268370 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268371 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9268430 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268431 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9268490 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9268491 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9268550 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268551 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9268610 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268611 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9268670 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9268671 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 9268729 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 9268730 tgaagaatgagccggcgactcataggcagtggctt 9268764 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227691 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9227750 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9227751 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9227810 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227811 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9227870 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227871 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9227930 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227931 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9227990 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9227991 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9228050 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228051 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9228110 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228111 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9228170 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9228171 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 9228229 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 9228230 tgaagaatgagccggcgactcataggcagtggctt 9228264 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164280 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9164339 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164340 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9164399 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164400 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9164459 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164460 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9164519 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164520 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9164579 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9164580 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9164639 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164640 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9164699 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164700 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9164759 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9164760 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 9164818 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 9164819 tgaagaatgagccggcgactcataggcagtggctt 9164853 Score = 1100 bits (555), Expect = 0.0 Identities = 571/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056105 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9056164 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056165 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9056224 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056225 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9056284 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056285 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9056344 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056345 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9056404 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056405 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9056464 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056465 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9056524 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056525 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9056584 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9056585 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 9056643 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 9056644 tgaagaatgagccggcgactcataggcagtggctt 9056678 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 486 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 531 |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggg 25171408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938176 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19938235 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938236 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19938295 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938296 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19938355 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938356 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19938415 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938416 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19938475 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19938476 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 19938535 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938536 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 19938595 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938596 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 19938655 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19938656 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 19938714 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 19938715 tgaagaatgagccggcgactcataggcagtggctt 19938749 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277255 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10277196 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10277195 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10277136 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277135 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10277076 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277075 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10277016 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277015 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10276956 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10276955 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10276896 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276895 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10276836 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276835 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 10276776 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10276775 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 10276717 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 10276716 tgaagaatgagccggcgactcataggcagtggctt 10276682 Score = 1100 bits (555), Expect = 0.0 Identities = 571/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387043 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10387102 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10387162 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10387222 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10387282 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10387342 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387343 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10387402 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387403 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10387462 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10387463 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 10387522 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10387523 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 10387581 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 10387582 tgaagaatgagccggcgactcataggcagtggctt 10387616 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 444 agtaccgtgagggaaaggtgaaaagaacccc 474 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 ttgtgctgctaggcgaagcggttgagtgc 297 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598358 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 31598417 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598418 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 31598477 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598478 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 31598537 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598538 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 31598597 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598598 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 31598657 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31598658 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 31598717 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598718 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 31598777 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598778 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 31598837 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 31598838 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 31598896 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 31598897 tgaagaatgagccggcgactcataggcagtggctt 31598931
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525674 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 33525733 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33525734 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 33525793 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525794 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 33525853 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525854 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 33525913 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525914 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 33525973 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33525974 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 33526033 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526034 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 33526093 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526094 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 33526153 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 33526154 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 33526212 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 33526213 tgaagaatgagccggcgactcataggcagtggctt 33526247 Score = 258 bits (130), Expect = 2e-65 Identities = 143/146 (97%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 448 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 507 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 508 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 567 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 16677983 Query: 568 agccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||| Sbjct: 16677982 agccggcgactcataggcagtggctt 16677957 Score = 180 bits (91), Expect = 3e-42 Identities = 107/111 (96%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 462 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 521 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 522 gtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 572 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 455 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 493 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttc 52 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47867 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 47808 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47807 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 47748 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47747 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 47688 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47687 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 47628 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47627 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 47568 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47567 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 47508 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47507 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 47448 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47447 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 47388 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 47387 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 47329 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 47328 tgaagaatgagccggcgactcataggcagtggctt 47294
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70871 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 70930 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 70931 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 70990 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70991 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 71050 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71051 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 71110 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71111 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 71170 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 71171 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 71230 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71231 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 71290 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71291 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 71350 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 71351 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 71409 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 71410 tgaagaatgagccggcgactcataggcagtggctt 71444 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 342 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 343 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 402 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 462 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 522 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 523 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 581 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 582 tgaagaatgagccggcgactcataggcagtggctt 616
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 99 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 159 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 219 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 279 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 339 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 340 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 399 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 459 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 519 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 520 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 578 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 579 tgaagaatgagccggcgactcataggcagtggctt 613
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949452 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19949511 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949512 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19949571 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949572 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 19949631 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949632 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 19949691 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949692 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 19949751 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19949752 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 19949811 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949812 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 19949871 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949872 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 19949931 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19949932 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 19949990 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 19949991 tgaagaatgagccggcgactcataggcagtggctt 19950025 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283294 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10283235 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10283234 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10283175 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283174 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10283115 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283114 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10283055 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283054 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10282995 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10282994 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10282935 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282934 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10282875 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282874 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 10282815 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10282814 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 10282756 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 10282755 tgaagaatgagccggcgactcataggcagtggctt 10282721 Score = 1100 bits (555), Expect = 0.0 Identities = 571/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393082 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 10393141 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393142 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 10393201 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393202 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 10393261 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393262 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 10393321 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393322 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 10393381 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393382 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 10393441 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393442 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 10393501 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10393502 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 10393561 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 10393562 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 10393620 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 10393621 tgaagaatgagccggcgactcataggcagtggctt 10393655 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 ttgtgctgctaggcgaagcggttgagtgc 297 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119835 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119776 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119775 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119716 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 119656 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 119596 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119595 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 119536 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119535 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 119476 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119475 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 119416 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 119356 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 119355 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 119297 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 119296 tgaagaatgagccggcgactcataggcagtggctt 119262 Score = 1108 bits (559), Expect = 0.0 Identities = 572/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95204 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 95263 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95264 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 95323 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95324 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 95383 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 95443 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95444 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 95503 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95504 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 95563 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95564 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95623 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95624 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 95683 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95684 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 95742 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 95743 tgaagaatgagccggcgactcataggcagtggctt 95777
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1100 bits (555), Expect = 0.0 Identities = 571/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140839 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 140898 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 140899 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 140958 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140959 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 141018 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141019 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 141078 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141079 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 141138 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141139 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 141198 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141199 tcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 141258 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141259 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 141318 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141319 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 141377 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 141378 tgaagaatgagccggcgactcataggcagtggctt 141412
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1100 bits (555), Expect = 0.0 Identities = 571/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93435 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 93494 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93495 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 93554 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93555 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 93614 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93615 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 93674 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93675 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 93734 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93735 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 93794 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93795 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 93854 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 93855 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 93914 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 93915 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 93973 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 93974 tgaagaatgagccggcgactcataggcagtggctt 94008
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1100 bits (555), Expect = 0.0 Identities = 571/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27499 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 27558 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27559 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 27618 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27619 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 27678 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27679 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 27738 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27739 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 27798 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27799 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 27858 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27859 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 27918 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 27919 gaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtg 27978 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 27979 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 28037 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||| Sbjct: 28038 tgaagaatgagccggcgactcataggcagtggctt 28072
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1092 bits (551), Expect = 0.0 Identities = 570/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242090 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 9242031 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9242030 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 9241971 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241970 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 9241911 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241910 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 9241851 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241850 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 9241791 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9241790 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 9241731 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241730 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 9241671 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241670 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 9241611 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9241610 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 9241552 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||| |||||||||||||||||||||| Sbjct: 9241551 tgaagaatgagctggcgactcataggcagtggctt 9241517 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 151 actgaaacatcttagtagccagaggaaaagaaag 184 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1092 bits (551), Expect = 0.0 Identities = 570/575 (99%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53303 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 53244 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 53243 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 53184 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53183 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 53124 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53123 gtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 53064 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53063 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 53004 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 53003 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 52944 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52943 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 52884 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52883 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 52824 Query: 499 aaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgt 558 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 52823 aaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcctgt 52765 Query: 559 tgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||| |||||||||||||||||||||| Sbjct: 52764 tgaagaatgagctggcgactcataggcagtggctt 52730
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1090 bits (550), Expect = 0.0 Identities = 569/574 (99%), Gaps = 1/574 (0%) Strand = Plus / Plus Query: 20 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 80 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 139 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 140 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 200 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 260 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 319 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 320 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 379 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 380 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 440 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 500 aaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgtt 559 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtggga-ggggaaattgatctctgaccgcgtgcctgtt 539 Query: 560 gaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||| Sbjct: 540 gaagaatgagccggcgactcataggcagtggctt 573
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1049 bits (529), Expect = 0.0 Identities = 579/591 (97%), Gaps = 4/591 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 62 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 123645 ctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 123587 Query: 63 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 122 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 123586 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 123527 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123526 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 123467 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123466 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 123407 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123406 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123347 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 123346 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 123288 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123287 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 123228 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123227 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 123168 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 123167 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 123109 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123108 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 123058 Score = 1049 bits (529), Expect = 0.0 Identities = 579/591 (97%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 62 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 99092 ctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 99150 Query: 63 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 122 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 99151 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 99210 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99211 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 99270 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99271 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 99330 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99331 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 99390 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 99391 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 99449 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99450 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 99509 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99510 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 99569 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 99570 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 99628 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99629 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 99679
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1049 bits (529), Expect = 0.0 Identities = 579/591 (97%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 62 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5445 ctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 5503 Query: 63 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 122 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 5504 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 5563 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5564 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 5623 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 5683 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5684 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 5743 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 5744 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 5802 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5803 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 5862 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5863 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 5922 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5923 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 5981 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5982 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 6032
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1049 bits (529), Expect = 0.0 Identities = 579/591 (97%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttga 62 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 33 ctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcggggagttga 91 Query: 63 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 122 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 92 aaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaatc 151 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 211 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 271 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 331 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 332 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 390 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 450 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 510 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 511 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 569 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 620
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1007 bits (508), Expect = 0.0 Identities = 521/524 (99%), Gaps = 1/524 (0%) Strand = Plus / Plus Query: 70 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 129 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 130 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 190 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 250 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 310 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 369 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 370 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 430 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 490 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccg 549 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccg 479 Query: 550 cgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcataggcagtggctt 523
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 991 bits (500), Expect = 0.0 Identities = 516/520 (99%), Gaps = 1/520 (0%) Strand = Plus / Plus Query: 74 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 133 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 194 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 254 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 314 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 373 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 374 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 434 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 494 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtg 553 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtg 479 Query: 554 cctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cctgttgaagaatgagccggcgactcataggcagtggctt 519
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 942 bits (475), Expect = 0.0 Identities = 485/487 (99%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 107 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 167 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 227 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 287 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 346 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 347 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 407 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 467 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 527 agggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 586 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 a-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 479 Query: 587 gtggctt 593 ||||||| Sbjct: 480 gtggctt 486
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 932 bits (470), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139555 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 139497 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139496 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 139438 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139437 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 139378 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139377 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 139318 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||||| Sbjct: 139317 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcacc 139258 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 139257 ctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagc 139198 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139197 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 139138 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 139137 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 139078 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 139077 gtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatctc 139022 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139021 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 138972 Score = 932 bits (470), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110390 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 110448 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 110449 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 110507 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110508 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 110567 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110568 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 110627 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||||| Sbjct: 110628 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcacc 110687 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 110688 ctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagc 110747 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110748 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 110807 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 110808 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 110867 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 110868 gtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatctc 110923 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110924 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 110973
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 932 bits (470), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127833 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 127775 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 127774 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 127716 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127715 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 127656 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127655 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 127596 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 127595 gggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcacc 127536 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 127535 ctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagc 127476 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127475 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 127416 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 127415 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 127356 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||| || ||| |||||||| Sbjct: 127355 gtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatgtgatctc 127300 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127299 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 127250 Score = 932 bits (470), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107089 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 107147 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 107148 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 107206 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107207 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 107266 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107267 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 107326 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 107327 gggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcacc 107386 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 107387 ctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagc 107446 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107447 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 107506 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 107507 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 107566 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||| || ||| |||||||| Sbjct: 107567 gtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatgtgatctc 107622 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107623 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 107672
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 932 bits (470), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134192 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 134134 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 134133 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 134075 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134074 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 134015 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134014 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 133955 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 133954 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcacc 133895 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133894 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 133835 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133834 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 133775 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 133774 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 133715 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||| || ||| |||||||| Sbjct: 133714 gtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatgtgatctc 133659 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133658 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 133609 Score = 932 bits (470), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103779 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 103837 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 103838 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 103896 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103897 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 103956 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103957 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104016 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 104017 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcacc 104076 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104077 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 104136 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104137 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104196 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 104197 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 104256 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||| || ||| |||||||| Sbjct: 104257 gtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatgtgatctc 104312 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104313 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104362
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 922 bits (465), Expect = 0.0 Identities = 471/473 (99%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 103 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 163 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 223 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 283 Query: 259 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 343 Query: 319 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 378 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 344 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 403 Query: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 463 Query: 439 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 916 bits (462), Expect = 0.0 Identities = 561/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142077 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 142019 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 142018 aataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 141960 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141959 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 141900 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141899 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 141840 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| Sbjct: 141839 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcacc 141780 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | ||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 141779 ctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagc 141720 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141719 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 141660 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 141659 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 141600 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 141599 gtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatctc 141544 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141543 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 141494 Score = 916 bits (462), Expect = 0.0 Identities = 561/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111580 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 111638 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 111639 aataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 111697 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111698 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 111757 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111758 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 111817 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| Sbjct: 111818 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcacc 111877 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | ||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 111878 ctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagc 111937 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 111938 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 111997 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 111998 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 112057 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 112058 gtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggagaatttgatctc 112113 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112114 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 112163
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 908 bits (458), Expect = 0.0 Identities = 559/590 (94%), Gaps = 10/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134950 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 134892 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 134891 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 134833 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134832 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 134773 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134772 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 134713 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct: 134712 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacc 134653 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 134652 ctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagc 134593 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134592 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 134533 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 134532 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 134473 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||||| || ||||| Sbjct: 134472 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg-----agaaatctc 134421 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134420 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 134371 Score = 908 bits (458), Expect = 0.0 Identities = 559/590 (94%), Gaps = 10/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105332 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 105390 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 105391 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 105449 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105450 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105509 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105510 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105569 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct: 105570 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacc 105629 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 105630 ctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagc 105689 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105690 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 105749 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 105750 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 105809 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| |||||||||||||||||||||| || ||||| Sbjct: 105810 gtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg-----agaaatctc 105861 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 105911
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 904 bits (456), Expect = 0.0 Identities = 559/590 (94%), Gaps = 8/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 136560 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 136502 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 136501 aataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 136443 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136442 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136383 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136382 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136323 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 136322 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 136263 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136262 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 136203 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 136143 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 136142 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 136083 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 136082 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggctc 136029 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136028 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135979 Score = 904 bits (456), Expect = 0.0 Identities = 559/590 (94%), Gaps = 8/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105865 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 105923 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 105924 aataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 105982 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105983 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106042 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106043 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106102 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 106103 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 106162 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106163 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 106222 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 106282 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 106283 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 106342 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 106343 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggctc 106396 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106446
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 894 bits (451), Expect = 0.0 Identities = 558/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132744 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 132686 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 132685 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 132627 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132626 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 132567 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132566 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 132507 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 132506 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 132447 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132446 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 132387 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132386 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 132327 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 132326 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 132267 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 132266 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ctc 132212 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132211 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 132162 Score = 894 bits (451), Expect = 0.0 Identities = 558/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104134 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 104192 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 104193 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 104251 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104252 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 104311 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104312 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104371 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 104372 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 104431 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104432 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 104491 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104492 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104551 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 104552 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 104611 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 104612 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ctc 104666 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104667 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104716
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 894 bits (451), Expect = 0.0 Identities = 558/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132967 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 132909 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 132908 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 132850 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132849 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 132790 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132789 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 132730 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct: 132729 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 132670 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132669 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 132610 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132609 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 132550 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 132549 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 132490 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 132489 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggctc 132435 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132434 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 132385 Score = 894 bits (451), Expect = 0.0 Identities = 558/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103797 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 103855 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 103856 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 103914 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103915 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 103974 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103975 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104034 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct: 104035 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 104094 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104095 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 104154 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104155 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104214 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 104215 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 104274 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 104275 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggctc 104329 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104330 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104379
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 894 bits (451), Expect = 0.0 Identities = 558/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132737 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 132679 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 132678 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 132620 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132619 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 132560 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132559 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 132500 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 132499 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 132440 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132439 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 132380 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132379 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 132320 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 132319 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 132260 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 132259 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ctc 132205 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132204 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 132155 Score = 894 bits (451), Expect = 0.0 Identities = 558/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104132 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 104190 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 104191 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 104249 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104250 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 104309 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104310 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104369 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 104370 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 104429 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104430 ctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 104489 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104490 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 104549 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 104550 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 104609 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 104610 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ctc 104664 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104665 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104714
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 886 bits (447), Expect = 0.0 Identities = 557/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 131636 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 131578 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 131577 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 131519 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131518 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 131459 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131458 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 131399 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 131398 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 131339 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131338 ctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 131279 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131278 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 131219 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 131218 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 131159 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 131158 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ctc 131104 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131103 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 131054 Score = 886 bits (447), Expect = 0.0 Identities = 557/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102999 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 103057 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| Sbjct: 103058 aataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaatcc 103116 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103117 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 103176 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103177 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 103236 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||||| Sbjct: 103237 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcacc 103296 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103297 ctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 103356 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103357 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 103416 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 103417 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 103476 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 103477 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ctc 103531 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103532 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 103581
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 886 bits (447), Expect = 0.0 Identities = 557/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133928 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 133870 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 133869 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 133811 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133810 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 133751 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133750 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 133691 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||| Sbjct: 133690 gggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 133631 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133630 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 133571 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133570 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 133511 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 133510 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 133451 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 133450 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggctc 133396 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133395 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 133346 Score = 886 bits (447), Expect = 0.0 Identities = 557/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104721 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 104779 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 104780 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 104838 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 104898 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 104958 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||| Sbjct: 104959 gggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 105018 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105019 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 105078 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 105138 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 105139 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 105198 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 105199 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggctc 105253 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105254 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 105303
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 878 bits (443), Expect = 0.0 Identities = 556/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 140329 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 140271 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 140270 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 140212 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140211 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 140152 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140151 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 140092 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||| Sbjct: 140091 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcacc 140032 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 140031 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 139972 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139971 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 139912 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 139911 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 139852 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | || ||||||||||||||||| | | | | ||| Sbjct: 139851 gtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag--acgggggctc 139797 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139796 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 139747 Score = 878 bits (443), Expect = 0.0 Identities = 556/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109731 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 109789 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 109790 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 109848 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109849 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 109908 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109909 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 109968 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||| Sbjct: 109969 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcacc 110028 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110029 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 110088 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110089 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 110148 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 110149 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 110208 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | || ||||||||||||||||| | | | | ||| Sbjct: 110209 gtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag--acgggggctc 110263 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110264 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 110313
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 878 bits (443), Expect = 0.0 Identities = 556/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 30 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 88 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||| |||||||| |||||| |||||||||| Sbjct: 89 aataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatcc 147 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 207 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 267 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||| Sbjct: 268 gggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 327 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 328 ctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagtagc 387 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 447 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 448 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 507 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 508 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--ccctgggctc 562 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 612
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 878 bits (443), Expect = 0.0 Identities = 556/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ctc 571 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 621
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 862 bits (435), Expect = 0.0 Identities = 554/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 106036 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 106094 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 106095 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 106153 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106154 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106213 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106214 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106273 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 106274 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacc 106333 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106334 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 106393 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 106453 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 106454 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 106513 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106514 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgaggactc 106568 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106618 Score = 813 bits (410), Expect = 0.0 Identities = 553/593 (93%), Gaps = 10/593 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 135873 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 135815 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 135814 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 135756 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135755 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135696 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135695 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135636 Query: 244 gggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 ||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 135635 gggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 135576 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgacccgagta 361 |||||||||| | |||||||||||||||||||||||||||||| | | |||||||||||| Sbjct: 135575 cctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagta 135516 Query: 362 gcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135515 gcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatac 135456 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 135455 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 135396 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 135395 ggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgagga 135341 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135288
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 862 bits (435), Expect = 0.0 Identities = 554/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 136149 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 136091 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 136090 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 136032 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135972 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135971 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135912 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 135911 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacc 135852 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135851 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 135792 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135791 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 135732 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 135731 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 135672 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 135671 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgaggactc 135617 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135567 Score = 862 bits (435), Expect = 0.0 Identities = 554/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 106258 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgca 106316 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 106317 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 106375 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106376 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106435 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106436 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106495 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 106496 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcacc 106555 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106556 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 106615 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106616 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 106675 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 106676 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 106735 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106736 gtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag--acgaggactc 106790 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106791 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106840
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 860 bits (434), Expect = 0.0 Identities = 557/593 (93%), Gaps = 8/593 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 46283 ctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcggggagttgaa 46341 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 46342 aataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 46400 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 46401 atgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaa 46460 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 46461 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 46520 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 46521 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcacc 46580 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46581 ctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 46640 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46641 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 46700 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 46701 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 46760 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gggaaagtg--at 540 |||||||||||| |||||||| | ||||| |||||||||||||| || ||| | Sbjct: 46761 gtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaggcgccgtggaag 46817 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 46870
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 136269 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 136211 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 136210 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 136152 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136151 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136092 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136091 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136032 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 136031 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 135972 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135971 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 135912 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135911 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135852 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135851 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135792 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135791 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 135738 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135687 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106361 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106419 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106420 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106478 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106479 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106538 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106539 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106598 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 106599 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 106658 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106659 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 106718 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106719 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106778 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106779 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106838 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 106839 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106892 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106893 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106943
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 136907 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 136849 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 136848 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 136790 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136789 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136730 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136729 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136670 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 136669 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 136610 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 136609 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 136550 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136549 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 136490 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136489 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 136430 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 136429 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 136376 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136375 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 136325 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106650 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106708 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106709 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106767 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106768 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106827 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106828 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106887 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 106888 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 106947 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106948 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 107007 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107008 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 107067 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 107068 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 107127 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 107128 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 107181 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107182 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 107232
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1555 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 1613 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 1614 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 1672 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1673 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 1732 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1733 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 1792 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 1793 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 1852 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1853 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 1912 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1913 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 1972 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1973 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 2032 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 2033 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 2086 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2087 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 2137
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135515 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135457 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135456 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135398 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135397 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135338 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135337 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135278 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135218 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135217 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135158 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135157 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135098 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135097 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135038 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135037 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 134984 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134983 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 134933 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105521 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105579 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105580 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105638 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105639 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105698 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105699 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105758 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105759 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105818 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105819 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 105878 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105879 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105938 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105939 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 105998 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 105999 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106052 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106053 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106103
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135650 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135592 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135591 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135533 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135532 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135473 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135472 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135413 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135412 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135353 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135352 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135293 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135292 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135233 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135232 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135173 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135172 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 135119 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135068 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105693 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105751 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105752 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105810 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105811 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105870 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105871 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105930 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105931 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105990 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105991 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106050 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106110 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106111 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106170 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 106171 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106224 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106225 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106275
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135648 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135590 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135589 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135531 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135530 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135471 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135470 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135411 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135410 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135351 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135350 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135291 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135290 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135231 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135230 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135171 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135170 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 135117 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135116 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135066 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105690 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105748 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105749 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105807 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105808 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105867 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105868 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105927 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105928 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105987 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105988 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106047 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106107 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106108 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106167 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 106168 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106221 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106222 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106272
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135560 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135502 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135501 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135443 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135442 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135383 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135382 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135323 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135322 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135263 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135262 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135203 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135202 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135143 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135142 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135083 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135082 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 135029 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135028 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 134978 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105568 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105626 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105627 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105685 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105686 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105745 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105746 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105805 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105806 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105865 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105866 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 105925 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105926 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105985 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105986 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106045 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 106046 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106099 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106100 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106150
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 136267 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 136209 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 136208 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 136150 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136149 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 136090 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136089 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 136030 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 136029 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 135970 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135969 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 135910 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135909 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135850 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135849 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135790 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135789 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 135736 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135735 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135685 Score = 858 bits (433), Expect = 0.0 Identities = 555/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106359 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106417 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106418 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106476 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106477 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106536 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106537 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106596 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 106597 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 106656 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106657 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 106716 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106717 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106776 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106777 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106836 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 106837 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106890 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106941
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 856 bits (432), Expect = 0.0 Identities = 555/591 (93%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 89 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 90 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 148 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 149 atgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaaagaaa 208 Query: 184 gcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 209 gcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaac 268 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 269 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 328 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 329 cctagatggctagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 388 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 448 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 449 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccgggg 508 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 509 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctgggg--ct 563 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 614
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 854 bits (431), Expect = 0.0 Identities = 553/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139473 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 139415 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139414 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 139356 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139355 atgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaa 139296 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139295 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 139236 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||| Sbjct: 139235 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacc 139176 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139175 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 139116 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139115 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 139056 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 139055 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggga 138996 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 138995 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctc 138941 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138940 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 138891 Score = 854 bits (431), Expect = 0.0 Identities = 553/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109624 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 109682 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 109683 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 109741 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 109742 atgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaa 109801 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109802 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 109861 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||| Sbjct: 109862 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacc 109921 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 109922 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 109981 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109982 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 110041 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 110042 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggga 110101 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 110102 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctc 110156 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110157 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 110206
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 850 bits (429), Expect = 0.0 Identities = 554/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135998 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135940 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||| ||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135939 aataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135881 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135880 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135821 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135820 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135761 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 135760 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 135701 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135700 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 135641 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135640 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135581 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135580 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135521 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135520 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 135467 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135416 Score = 850 bits (429), Expect = 0.0 Identities = 554/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 106140 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 106198 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||| ||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 106199 aataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatcc 106257 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106258 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 106317 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106318 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 106377 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct: 106378 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcac 106437 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106438 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 106497 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106498 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106557 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106558 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106617 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 106618 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106671 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106672 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106722
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 850 bits (429), Expect = 0.0 Identities = 554/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 135527 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 135469 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 135468 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 135410 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135409 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 135350 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135349 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 135290 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 135289 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 135230 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135229 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135170 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135169 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135110 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135109 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135050 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 135049 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 134996 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134995 ctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggctt 134945 Score = 850 bits (429), Expect = 0.0 Identities = 554/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 105535 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 105593 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 105594 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 105652 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105653 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 105712 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105713 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 105772 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 105773 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 105832 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105833 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 105892 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105893 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105952 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105953 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106012 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 106013 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 106066 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106067 ctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggctt 106117
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 844 bits (426), Expect = 0.0 Identities = 553/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 131760 ctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 131702 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 131701 aataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatcc 131643 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131642 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 131583 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131582 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 131523 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 131522 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaacc 131463 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131462 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 131403 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131402 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 131343 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 131342 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 131283 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | ||||| ||||||||||||||||| | || | | Sbjct: 131282 gtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg-accaga-ccc 131228 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131227 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 131178 Score = 844 bits (426), Expect = 0.0 Identities = 553/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 101685 ctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 101743 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 101744 aataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatcc 101802 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101803 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 101862 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101863 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 101922 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 101923 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaacc 101982 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101983 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 102042 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102043 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 102102 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 102103 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 102162 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | ||||| ||||||||||||||||| | || | | Sbjct: 102163 gtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg-accaga-ccc 102217 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102218 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 102267
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 841 bits (424), Expect = 0.0 Identities = 550/588 (93%), Gaps = 6/588 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 32 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||| ||| |||||||| |||||| |||||||| | Sbjct: 91 aataagcatagatccggagattcccgaatgggttaaccttttgaactgc-tgctgaattc 149 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 209 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 210 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 269 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| Sbjct: 270 gggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcacc 329 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | |||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 330 ccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtagc 389 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 449 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 450 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 509 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||||||| |||||||||||||||||||| | | | |||||| Sbjct: 510 gtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcg-gatctc 565 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 566 tgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 613
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 841 bits (424), Expect = 0.0 Identities = 554/592 (93%), Gaps = 7/592 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139682 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 139624 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139623 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 139565 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139564 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 139505 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139504 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 139445 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 139444 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcac 139385 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139384 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 139325 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139324 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139265 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 139264 ctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 139205 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-gatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | | Sbjct: 139204 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggac 139148 Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139147 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 139096 Score = 841 bits (424), Expect = 0.0 Identities = 554/592 (93%), Gaps = 7/592 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109617 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 109675 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 109676 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 109734 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109735 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 109794 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109795 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 109854 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 109855 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcac 109914 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 109915 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 109974 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109975 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110034 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110035 ctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 110094 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-gatc 541 ||||||||||||| |||||||| | |||||||||||||||||||| | | | | | Sbjct: 110095 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggac 110151 Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110152 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 110203
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 835 bits (421), Expect = 0.0 Identities = 553/591 (93%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 6 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 64 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 65 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 123 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcac 302 |||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||| Sbjct: 244 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcac 303 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 || | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 304 cc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 362 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 482 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 483 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 536 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 587
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 62 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 121 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 122 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 182 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 242 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 302 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 482 tagtga 487 |||||| Sbjct: 421 tagtga 426
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 821 bits (414), Expect = 0.0 Identities = 500/526 (95%), Gaps = 5/526 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 130504 ctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaa 130446 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 130445 aataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatcc 130387 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130386 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 130327 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130326 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 130267 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 130266 gggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 130207 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130206 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 130147 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130146 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 130087 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 130086 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 130027 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130026 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 821 bits (414), Expect = 0.0 Identities = 500/526 (95%), Gaps = 5/526 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 101952 ctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaa 102010 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||| Sbjct: 102011 aataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaatcc 102069 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102070 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 102129 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102130 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 102189 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 102190 gggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcacc 102249 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102250 ctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 102309 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102310 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 102369 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 102370 tgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 102429 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102430 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 97.6 bits (49), Expect = 4e-17 Identities = 52/53 (98%) Strand = Plus / Minus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggctt 129917 Score = 97.6 bits (49), Expect = 4e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggctt 102539
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 813 bits (410), Expect = 0.0 Identities = 499/526 (94%), Gaps = 5/526 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 813 bits (410), Expect = 0.0 Identities = 499/526 (94%), Gaps = 5/526 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || | Sbjct: 457 tgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccggga 516 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||| ||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggctt 633
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 811 bits (409), Expect = 0.0 Identities = 549/591 (92%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142848 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 142790 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 142789 aataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 142731 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142730 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 142671 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142670 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 142611 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcac 302 |||||||||||||| |||||||||| ||||||||||||||||| | || ||||| |||| Sbjct: 142610 gggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcac 142551 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 142550 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 142491 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 142490 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 142431 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 142430 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 142371 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | ||||||||||||||||||| | | | || Sbjct: 142370 agtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca---gggct 142317 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142316 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 142266 Score = 811 bits (409), Expect = 0.0 Identities = 549/591 (92%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 110480 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 110538 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||| Sbjct: 110539 aataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatcc 110597 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110598 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 110657 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110658 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 110717 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcac 302 |||||||||||||| |||||||||| ||||||||||||||||| | || ||||| |||| Sbjct: 110718 gggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcac 110777 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110778 cctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 110837 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110838 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 110897 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110898 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 110957 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | ||||||||||||||||||| | | | || Sbjct: 110958 agtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca---gggct 111011 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111012 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 111062
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 809 bits (408), Expect = 0.0 Identities = 547/590 (92%), Gaps = 8/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4262 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 4320 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 4321 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 4379 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4380 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4439 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4440 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 4499 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||| ||||||||||||| | || || ||||| Sbjct: 4500 gggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcacc 4559 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4560 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 4619 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4620 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4679 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | Sbjct: 4680 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggga 4739 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||||||| |||||||||||||||||| ||| | ||| Sbjct: 4740 gtgaaatagaacatgaaaccgta---agctcccaagcagtggga---ggagctggggctc 4793 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4794 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 4843
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 809 bits (408), Expect = 0.0 Identities = 547/590 (92%), Gaps = 8/590 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 23663 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 23605 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 23604 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 23546 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23545 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 23486 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 23485 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 23426 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||| ||||||||||||| | || || ||||| Sbjct: 23425 gggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcacc 23366 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23365 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 23306 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23305 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 23246 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | Sbjct: 23245 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggga 23186 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||||||| |||||||||||||||||| ||| | ||| Sbjct: 23185 gtgaaatagaacatgaaaccgta---agctcccaagcagtggga---ggagctggggctc 23132 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23131 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 23082
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 807 bits (407), Expect = 0.0 Identities = 551/593 (92%), Gaps = 10/593 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 86293 ctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaa 86351 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||| ||||||||||||||||||||| ||||||| |||| ||| |||||| |||||||||| Sbjct: 86352 aatgagcatagatccggagattcccgaataggttaacccttttaactgc-tgctgaatcc 86410 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86411 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaatagaaa 86470 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86471 gcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacg 86530 Query: 244 gggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 301 ||||||||||||||| |||| |||| |||||||||||||||||||||||||| | ||| Sbjct: 86531 gggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgca 86590 Query: 302 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 361 |||||||||| | |||||||||||||||||||||| | ||||| ||||| ||||||||| Sbjct: 86591 ccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagta 86650 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86651 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 86710 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86711 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 86770 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-gat 540 ||||||||||||| |||||||| | |||||||||||||||||| || ||| | ||| Sbjct: 86771 gagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--ggaaaattagat 86825 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 86826 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggctt 86878
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 807 bits (407), Expect = 0.0 Identities = 551/593 (92%), Gaps = 10/593 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 88379 ctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaa 88437 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||| ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||| Sbjct: 88438 aattagcatagatccggagattcccgaataggttaacctttttcactgc-tgctgaatcc 88496 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 88497 atgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaatagaaa 88556 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88557 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 88616 Query: 244 gggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgca 301 |||||||||||||||| ||| |||| |||||||||||||||||||||||||| | ||| Sbjct: 88617 gggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgca 88676 Query: 302 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 361 |||||||||| | |||||||||||||||||||||| | ||||| ||||| ||||||||| Sbjct: 88677 ccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagta 88736 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88737 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 88796 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 88797 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 88856 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt-gat 540 ||||||||||||| |||||||| | |||||||||||||||||| || ||| | ||| Sbjct: 88857 gagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--ggaaaattagat 88911 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 88912 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggctt 88964
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 805 bits (406), Expect = 0.0 Identities = 498/526 (94%), Gaps = 5/526 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccggga 516 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 50.1 bits (25), Expect = 0.008 Identities = 47/53 (88%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||| ||||||||||||||| ||||| || |||| ||||| |||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggctt 632
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 805 bits (406), Expect = 0.0 Identities = 498/526 (94%), Gaps = 5/526 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 48/53 (90%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||| |||||||||||| || |||||||| |||||||||||| |||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcataggaagtggctt 632
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 805 bits (406), Expect = 0.0 Identities = 498/526 (94%), Gaps = 5/526 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggggttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 98 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 337 ctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 517 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 73.8 bits (37), Expect = 6e-10 Identities = 50/53 (94%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||| ||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggctt 632
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 805 bits (406), Expect = 0.0 Identities = 551/593 (92%), Gaps = 9/593 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 131840 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 131782 Query: 64 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 122 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 131781 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 131723 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 || | |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131722 cacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaa 131663 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131662 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131603 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 300 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 131602 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 131543 Query: 301 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 360 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131542 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 131483 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131482 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 131423 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 131422 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 131363 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 131362 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga- 131307 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 131254 Score = 805 bits (406), Expect = 0.0 Identities = 551/593 (92%), Gaps = 9/593 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103554 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 103612 Query: 64 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 122 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 103613 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 103671 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 || | |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103672 cacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaa 103731 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103732 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 103791 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 300 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 103792 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 103851 Query: 301 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 360 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103852 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 103911 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103912 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 103971 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 103972 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 104031 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 104032 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga- 104087 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104140
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 799 bits (403), Expect = 0.0 Identities = 527/565 (93%), Gaps = 7/565 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 138 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct: 139 aataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatcc 197 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 198 atgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaa 257 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 317 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||| Sbjct: 318 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaacc 377 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 378 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 437 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 497 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 498 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggga 557 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | ||||||||||||| |||||| | || | ||| Sbjct: 558 gtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg--ctc 612 Query: 544 tgaccgcgtgcctgttgaagaatga 568 ||||||||||||||||||||||||| Sbjct: 613 tgaccgcgtgcctgttgaagaatga 637
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 799 bits (403), Expect = 0.0 Identities = 552/593 (93%), Gaps = 12/593 (2%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || | ||||||||||||||||||||||| Sbjct: 1798 ctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcggggagttgaa 1855 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 1856 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 1914 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1915 atgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaaagaaa 1974 Query: 184 gcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1975 gcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 2034 Query: 243 ggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggttgagtgccgc 300 ||||||||||||||||||||||||| | ||||||||||||||||| | || ||| || Sbjct: 2035 ggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgc 2094 Query: 301 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 360 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2095 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 2154 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2155 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 2214 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 2215 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 2274 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 2275 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---ggg 2328 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 2381
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 797 bits (402), Expect = 0.0 Identities = 547/591 (92%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 527 ctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 585 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| |||||||||||||||| |||||| |||||||| |||| | |||||||||| Sbjct: 586 aataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatcc 644 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 704 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 764 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 765 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacc 824 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 825 ctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 884 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 944 Query: 424 tgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggt 482 ||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 945 tgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcgggg 1004 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | ||||| |||||||||||||| | | | || Sbjct: 1005 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacagg----ct 1057 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 1108
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 797 bits (402), Expect = 0.0 Identities = 412/414 (99%), Gaps = 1/414 (0%) Strand = Plus / Plus Query: 180 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 240 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 300 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 359 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 360 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 480 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtga 539 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtga 359 Query: 540 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 413
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 793 bits (400), Expect = 0.0 Identities = 410/412 (99%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 182 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 242 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 302 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 411
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 793 bits (400), Expect = 0.0 Identities = 410/412 (99%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 182 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 242 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 302 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 411
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 791 bits (399), Expect = 0.0 Identities = 409/411 (99%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 359 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 791 bits (399), Expect = 0.0 Identities = 409/411 (99%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 362 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 413
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 791 bits (399), Expect = 0.0 Identities = 551/592 (93%), Gaps = 14/592 (2%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 131 ctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaa 189 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||| Sbjct: 190 aataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatcc 248 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaaaagaa 182 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 249 atgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaaaagaa 308 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 368 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgca 301 ||| ||||||||||||||||||||||| |||||||||||||||| || || ||| ||| Sbjct: 369 ggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgca 427 Query: 302 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 361 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 487 Query: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 488 gcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatact 547 Query: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 481 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct: 548 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc-atcggg 606 Query: 482 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 541 ||||||||||||| ||||||||| ||||||||||||||||||| | || | | Sbjct: 607 gagtgaaatagaacatgaaaccgta---agctcccaagcagtgggag---gccaggg--c 658 Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 710
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 787 bits (397), Expect = 0.0 Identities = 407/409 (99%), Gaps = 1/409 (0%) Strand = Plus / Plus Query: 185 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 245 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 305 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 364 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 365 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 425 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 485 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctct 544 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctct 359 Query: 545 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 408
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 779 bits (393), Expect = 0.0 Identities = 543/590 (92%), Gaps = 9/590 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| |||||||||||||||| |||||| |||||||| |||| | |||||||||| Sbjct: 98 aataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggga 516 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||| ||| |||||||| | ||||| |||||||||||||| | | | ||| Sbjct: 517 gtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacagg----ctc 569 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||| ||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 570 tgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggctt 619
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 765 bits (386), Expect = 0.0 Identities = 543/589 (92%), Gaps = 9/589 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 116178 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 116120 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| | Sbjct: 116119 aataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaattc 116061 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116060 ataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 116001 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 116000 gcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 115941 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 || ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | ||||| Sbjct: 115940 gg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcacc 115882 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||| Sbjct: 115881 ctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagc 115822 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115821 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 115762 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 115761 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 115702 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg-atct 542 |||||||||||| |||||||| | |||||||||||||||||||| | || || |||| Sbjct: 115701 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--aattgaatct 115647 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 115646 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 115598 Score = 765 bits (386), Expect = 0.0 Identities = 543/589 (92%), Gaps = 9/589 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 85942 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 86000 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||| |||||||||||||||||| ||||||| ||||||| ||||||| |||||||| | Sbjct: 86001 aataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaattc 86059 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86060 ataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 86119 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86120 gcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 86179 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 || ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | ||||| Sbjct: 86180 gg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcacc 86238 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||| Sbjct: 86239 ctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagc 86298 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86299 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 86358 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 86359 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 86418 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg-atct 542 |||||||||||| |||||||| | |||||||||||||||||||| | || || |||| Sbjct: 86419 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag--aattgaatct 86473 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86474 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 86522
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 765 bits (386), Expect = 0.0 Identities = 533/579 (92%), Gaps = 11/579 (1%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 128401 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 128342 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 128341 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 128283 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 128282 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 128223 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128222 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 128163 Query: 259 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 312 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 128162 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 128103 Query: 313 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 372 | |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| Sbjct: 128102 aagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcac 128043 Query: 373 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128042 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 127983 Query: 433 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 492 |||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 127982 gatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatag 127923 Query: 493 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgt 552 ||| ||||||||| |||||||||||||||||||| | | | ||||||||||||| | Sbjct: 127922 aacatgaaaccgta---agctcccaagcagtgggaggagaattg-gatctctgaccgcat 127867 Query: 553 gcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 127866 gcctgttgaggaatgagccggcgactcataggcagtggc 127828 Score = 765 bits (386), Expect = 0.0 Identities = 533/579 (92%), Gaps = 11/579 (1%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| Sbjct: 95046 acgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatcc 95105 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||| Sbjct: 95106 ggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagag 95164 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 95165 acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattccc 95224 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95225 gtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagc 95284 Query: 259 ------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 312 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95285 gatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggc 95344 Query: 313 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 372 | |||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||| Sbjct: 95345 aagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcac 95404 Query: 373 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95405 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 95464 Query: 433 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 492 |||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 95465 gatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatag 95524 Query: 493 aacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgt 552 ||| ||||||||| |||||||||||||||||||| | | | ||||||||||||| | Sbjct: 95525 aacatgaaaccgta---agctcccaagcagtgggaggagaattg-gatctctgaccgcat 95580 Query: 553 gcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 95581 gcctgttgaggaatgagccggcgactcataggcagtggc 95619
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 763 bits (385), Expect = 0.0 Identities = 543/591 (91%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 52655 ctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaa 52597 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||||| Sbjct: 52596 aataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatcc 52538 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52537 atgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 52478 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 52477 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacg 52418 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcac 302 ||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| |||| Sbjct: 52417 gggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcac 52358 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 52357 cctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtag 52298 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52297 catgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 52238 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 52237 ctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgggg 52178 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 52177 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 52124 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 52123 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggctt 52073 Score = 763 bits (385), Expect = 0.0 Identities = 543/591 (91%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 37173 ctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaa 37231 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||||| Sbjct: 37232 aataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatcc 37290 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37291 atgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 37350 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 37351 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacg 37410 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcac 302 ||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| |||| Sbjct: 37411 gggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcac 37470 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 37471 cctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtag 37530 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37531 catgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 37590 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 37591 ctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgggg 37650 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 37651 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 37704 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 37705 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggctt 37755
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 763 bits (385), Expect = 0.0 Identities = 543/591 (91%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 4101 ctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaa 4159 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||||| Sbjct: 4160 aataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatcc 4218 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4219 atgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4278 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4279 gcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacg 4338 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcac 302 ||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| |||| Sbjct: 4339 gggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcac 4398 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 4399 cctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtag 4458 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4459 catgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4518 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 4519 ctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattgggg 4578 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 4579 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca---gggct 4632 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4633 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggctt 4683
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 761 bits (384), Expect = 0.0 Identities = 474/502 (94%), Gaps = 2/502 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4531 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 4589 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 4590 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 4648 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4649 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4708 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4709 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 4768 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || || ||||| Sbjct: 4769 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcacc 4828 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4829 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaac 4888 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4889 atggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4948 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 4949 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggga 5008 Query: 484 gtgaaatagaacgtgaaaccgt 505 |||||||||||| ||||||||| Sbjct: 5009 gtgaaatagaacatgaaaccgt 5030 Score = 105 bits (53), Expect = 2e-19 Identities = 53/53 (100%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 5111
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 761 bits (384), Expect = 0.0 Identities = 474/502 (94%), Gaps = 2/502 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4531 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 4589 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 4590 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 4648 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4649 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 4708 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4709 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 4768 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||| || || || ||||| Sbjct: 4769 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcacc 4828 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4829 ctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaac 4888 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4889 atggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4948 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 4949 tgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggga 5008 Query: 484 gtgaaatagaacgtgaaaccgt 505 |||||||||||| ||||||||| Sbjct: 5009 gtgaaatagaacatgaaaccgt 5030 Score = 105 bits (53), Expect = 2e-19 Identities = 53/53 (100%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 5111
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 747 bits (377), Expect = 0.0 Identities = 540/589 (91%), Gaps = 7/589 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2075 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 2133 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 2134 aataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 2192 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2193 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 2252 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2253 gcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacg 2312 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | ||||| Sbjct: 2313 gggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacc 2372 Query: 304 ctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtag 362 |||||||| | |||||||||||||||||||| || | || ||||||| |||||||||| Sbjct: 2373 ctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtag 2432 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2433 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 2492 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2493 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 2552 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||| || ||| |||| Sbjct: 2553 agtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaatct 2608 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2609 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2657
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 747 bits (377), Expect = 0.0 Identities = 485/517 (93%), Gaps = 8/517 (1%) Strand = Plus / Minus Query: 78 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 137 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 138 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 198 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 258 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 316 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 317 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 377 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 436 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 437 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 496 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 497 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcct 556 |||||||| | |||||||||||||||||||| | | | |||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagcca---gggctctgaccgcgtgcct 40 Query: 557 gttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||| Sbjct: 39 gttgaagaatgagccggcgactcataggcagtggctt 3
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 747 bits (377), Expect = 0.0 Identities = 540/589 (91%), Gaps = 7/589 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 118118 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 118060 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 118059 aataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 118001 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118000 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 117941 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117940 gcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacg 117881 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | ||||| Sbjct: 117880 gggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacc 117821 Query: 304 ctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtag 362 |||||||| | |||||||||||||||||||| || | || ||||||| |||||||||| Sbjct: 117820 ctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtag 117761 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 117760 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 117701 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117700 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 117641 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||| || ||| |||| Sbjct: 117640 agtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaatct 117585 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 117584 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 117536 Score = 747 bits (377), Expect = 0.0 Identities = 540/589 (91%), Gaps = 7/589 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 89984 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90042 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 90043 aataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 90101 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90102 ataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 90161 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90162 gcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacg 90221 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | ||||| Sbjct: 90222 gggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacc 90281 Query: 304 ctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtag 362 |||||||| | |||||||||||||||||||| || | || ||||||| |||||||||| Sbjct: 90282 ctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtag 90341 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 90342 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 90401 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 90402 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 90461 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||| || ||| |||| Sbjct: 90462 agtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaatct 90517 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 90518 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 90566
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 745 bits (376), Expect = 0.0 Identities = 538/588 (91%), Gaps = 6/588 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3921 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 3979 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 3980 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 4038 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 4039 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 4098 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4099 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 4158 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 4159 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 4218 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 4219 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 4278 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4279 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 4338 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 4339 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 4398 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||| || | |||| |||||||||| || || ||| |||||| Sbjct: 4399 gtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatctc 4454 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4455 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 4502
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 745 bits (376), Expect = 0.0 Identities = 538/588 (91%), Gaps = 6/588 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 32 ctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||| ||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 91 aataagcatggatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 149 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 ataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 209 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 210 gcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 269 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||| |||||| | |||||||| |||||||||||| ||||| | | ||||| Sbjct: 270 gggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcacc 329 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 330 atagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccgagtagc 389 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 390 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcc 449 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 450 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatagggga 509 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| | |||||||||||||||||| || ||| ||||| Sbjct: 510 gtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggagaatcgaatctc 565 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 566 tgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 613
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 745 bits (376), Expect = 0.0 Identities = 538/588 (91%), Gaps = 6/588 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 15 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 73 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||||| Sbjct: 74 aataagtatagatccggagattcccgaataggttaaccttttaaactgc-tgctgaatcc 132 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || || |||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 133 ataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaagagaaa 192 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 193 gcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacg 252 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | ||||| Sbjct: 253 gggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcacc 312 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| | ||||||||| |||||||||| || ||||| ||||| ||||||||| | Sbjct: 313 ctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagtaac 372 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 432 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 433 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 492 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||||||| |||| ||||||||||||||| | | | |||||| Sbjct: 493 gtgaaatagaacatgaaaccgta---agcttccaagcagtgggaggagaatcg-gatctc 548 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 549 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 596
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 745 bits (376), Expect = 0.0 Identities = 538/588 (91%), Gaps = 6/588 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 31 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 89 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 90 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 148 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 149 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 208 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 209 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 268 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 269 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 328 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 329 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 388 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 448 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 449 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 508 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||| || | |||| |||||||||| || || ||| |||||| Sbjct: 509 gtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatctc 564 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 565 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 612
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 745 bits (376), Expect = 0.0 Identities = 538/588 (91%), Gaps = 6/588 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 151214 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 151156 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 151155 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 151097 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 151096 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 151037 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 151036 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 150977 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 150976 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 150917 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 150916 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 150857 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150856 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 150797 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 150796 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 150737 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||| || | |||| |||||||||| || || ||| |||||| Sbjct: 150736 gtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatctc 150681 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 150680 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 150633 Score = 745 bits (376), Expect = 0.0 Identities = 538/588 (91%), Gaps = 6/588 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 117452 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 117510 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 117511 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 117569 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 117570 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 117629 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117630 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 117689 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 117690 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 117749 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 117750 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 117809 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117810 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 117869 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 117870 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 117929 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||| || | |||| |||||||||| || || ||| |||||| Sbjct: 117930 gtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatctc 117985 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 117986 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 118033
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 745 bits (376), Expect = 0.0 Identities = 538/588 (91%), Gaps = 6/588 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 31 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 89 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| | Sbjct: 90 aagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaattc 148 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | || | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 149 acaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaa 208 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 209 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 268 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||||| Sbjct: 269 gggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcacc 328 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | ||||||||||||||||||| |||| |||| || | ||||||||||| Sbjct: 329 ccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagc 388 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 448 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 449 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggga 508 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| ||||| || | |||| |||||||||| || || ||| |||||| Sbjct: 509 gtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggagaatcggatctc 564 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 565 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 612
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 743 bits (375), Expect = 0.0 Identities = 541/592 (91%), Gaps = 10/592 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 32 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 90 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||| || ||||||||||||||| ||||||| ||||||||||||||| |||||||| | Sbjct: 91 aataagtatggatccggagattcccgaataggttaaccttttaaactgc-tgctgaattc 149 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || || |||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 150 ataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaaagaaa 209 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 210 gcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacg 269 Query: 244 gggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgccg 299 |||||||||| |||| |||||| || ||| ||||||||||||||| ||||||| | | Sbjct: 270 gggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcctg 329 Query: 300 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 359 ||||| |||||| | ||||||||| |||||||||| || | |||||||||| ||||||| Sbjct: 330 caccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaacccgag 389 Query: 360 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 449 Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 450 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcg 509 Query: 480 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtga 539 || ||||||||||||| ||||||||| |||||||||||||||||||| | | | || Sbjct: 510 gggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcg-ga 565 Query: 540 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 566 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 617
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 739 bits (373), Expect = 0.0 Identities = 546/591 (92%), Gaps = 20/591 (3%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 702 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 644 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||| ||| |||| ||||||||||| Sbjct: 643 aataagcgtagatccggagattcccgaataggtca--ctt---gactg-ctgctgaatcc 590 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||| || |||| ||| ||||||||||||||||||||||||||| Sbjct: 589 atg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagaggaaaagaaa 537 Query: 184 -gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 ggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 477 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 302 |||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 476 ggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 417 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 416 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 357 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 297 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 296 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 237 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 236 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccgggg--ct 182 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 131
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 733 bits (370), Expect = 0.0 Identities = 490/526 (93%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 39 ctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcggggagttgaa 97 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| |||||||||||||||| |||||| |||||||| |||| | |||||||||| Sbjct: 98 aataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatcc 156 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 216 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 276 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||| | || |||||| | ||| Sbjct: 277 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtacc 336 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 ctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 396 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 456 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| | Sbjct: 457 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcgggga 515 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 |||||||| ||| |||||||| | ||||| |||||||||||||| Sbjct: 516 gtgaaataaaacatgaaaccg---taagctctcaagcagtgggagg 558
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 733 bits (370), Expect = 0.0 Identities = 456/482 (94%), Gaps = 7/482 (1%) Strand = Plus / Plus Query: 113 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 172 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 173 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 233 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 291 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 292 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 351 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 352 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 412 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 471 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 472 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 531 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 532 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 cca---gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 490 Query: 592 tt 593 || Sbjct: 491 tt 492
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 731 bits (369), Expect = 0.0 Identities = 538/589 (91%), Gaps = 7/589 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 146528 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 146470 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| | Sbjct: 146469 aatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaattc 146411 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 146410 ataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaa 146351 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146350 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 146291 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | ||| Sbjct: 146290 gggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtacc 146231 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtag 362 |||||||| | |||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 146230 ctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtag 146171 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 146170 catggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 146111 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 146110 ctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 146051 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | ||||||||||||||||| || ||| |||| Sbjct: 146050 agtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggagaatcggatcc 145995 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 145994 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 145946 Score = 731 bits (369), Expect = 0.0 Identities = 538/589 (91%), Gaps = 7/589 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 111934 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaa 111992 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||| ||||| ||||||||||||||| ||||||| |||||||| |||| | |||||||| | Sbjct: 111993 aatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaattc 112051 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 112052 ataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaa 112111 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112112 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacg 112171 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 ||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | ||| Sbjct: 112172 gggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtacc 112231 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtag 362 |||||||| | |||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 112232 ctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtag 112291 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112292 catggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 112351 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 112352 ctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 112411 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | ||||||||||||||||| || ||| |||| Sbjct: 112412 agtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggagaatcggatcc 112467 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112468 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 112516
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 728 bits (367), Expect = 0.0 Identities = 449/472 (95%), Gaps = 5/472 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 28 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 86 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 87 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatcc 145 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 atgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 205 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 265 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| |||||||||||||||||||| || | | ||||| Sbjct: 266 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcacc 325 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 326 ctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 385 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 386 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac 445 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 475 |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 446 --ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 722 bits (364), Expect = 0.0 Identities = 439/462 (95%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 8 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 66 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| Sbjct: 67 aataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgccgaatcc 125 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 126 atgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaa 185 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 245 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| Sbjct: 246 gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcacc 305 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 306 ctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 365 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 425 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 465 ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 426 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 71 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 130 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 131 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 191 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 251 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 311 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 370 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 371 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 431 ccgata 436 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 21 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 80 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123423 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 123364 Query: 81 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 140 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123363 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123304 Query: 141 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123244 Query: 201 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123184 Query: 261 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123124 Query: 321 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 380 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123123 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 408 bits (206), Expect = e-111 Identities = 216/218 (99%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 372 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 551 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcg 122642 Query: 552 tgcctgttgaagaatgagccggcgactcataggcagtg 589 |||||||||||||||||||||| ||||||||||||||| Sbjct: 122641 tgcctgttgaagaatgagccggtgactcataggcagtg 122604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 21 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 80 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825964 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 12825905 Query: 81 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 140 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 12825845 Query: 141 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825844 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 12825785 Query: 201 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825784 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 12825725 Query: 261 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825724 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 12825665 Query: 321 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 380 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825664 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 408 bits (206), Expect = e-111 Identities = 216/218 (99%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 372 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 551 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcg 12825183 Query: 552 tgcctgttgaagaatgagccggcgactcataggcagtg 589 |||||||||||||||||||||| ||||||||||||||| Sbjct: 12825182 tgcctgttgaagaatgagccggtgactcataggcagtg 12825145 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 317 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 376 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 676 bits (341), Expect = 0.0 Identities = 387/402 (96%), Gaps = 14/402 (3%) Strand = Plus / Minus Query: 197 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 257 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 317 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 376 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 377 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 551 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 75128 Query: 552 tgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75127 tgcctgttgaagaatgagccggcgactcataggcagtggctt 75086 Score = 357 bits (180), Expect = 3e-95 Identities = 194/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75681 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 75623 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75622 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 75563 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75562 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 75503 Query: 184 gcaaaagcgattcccgta 201 |||||||||||||||||| Sbjct: 75502 gcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 128 gcaggcaagagacaacctggcgaactgaaacatcttagta 167 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 676 bits (341), Expect = 0.0 Identities = 387/402 (96%), Gaps = 14/402 (3%) Strand = Plus / Plus Query: 197 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 257 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 317 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 376 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 377 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 551 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 382410 Query: 552 tgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382411 tgcctgttgaagaatgagccggcgactcataggcagtggctt 382452 Score = 357 bits (180), Expect = 3e-95 Identities = 194/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381857 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 381915 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 381916 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 381975 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381976 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 382035 Query: 184 gcaaaagcgattcccgta 201 |||||||||||||||||| Sbjct: 382036 gcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 128 gcaggcaagagacaacctggcgaactgaaacatcttagta 167 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 128 gcaggcaagagacaacctggcgaactgaaacatcttagta 167 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 676 bits (341), Expect = 0.0 Identities = 387/402 (96%), Gaps = 14/402 (3%) Strand = Plus / Minus Query: 197 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 257 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 317 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 376 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 377 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 551 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 113219 Query: 552 tgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 113218 tgcctgttgaagaatgagccggcgactcataggcagtggctt 113177 Score = 357 bits (180), Expect = 3e-95 Identities = 194/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113772 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 113714 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 113713 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 113654 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113653 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 113594 Query: 184 gcaaaagcgattcccgta 201 |||||||||||||||||| Sbjct: 113593 gcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 128 gcaggcaagagacaacctggcgaactgaaacatcttagta 167 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 676 bits (341), Expect = 0.0 Identities = 387/402 (96%), Gaps = 14/402 (3%) Strand = Plus / Minus Query: 197 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 257 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 317 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 376 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 377 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 551 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 367901 Query: 552 tgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 367900 tgcctgttgaagaatgagccggcgactcataggcagtggctt 367859 Score = 676 bits (341), Expect = 0.0 Identities = 387/402 (96%), Gaps = 14/402 (3%) Strand = Plus / Minus Query: 197 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 257 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 317 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 376 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 377 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 431 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 432 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 492 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcg 551 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctgaccgcg 184506 Query: 552 tgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 184505 tgcctgttgaagaatgagccggcgactcataggcagtggctt 184464 Score = 357 bits (180), Expect = 3e-95 Identities = 194/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368454 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 368396 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 368395 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 368336 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368335 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 368276 Query: 184 gcaaaagcgattcccgta 201 |||||||||||||||||| Sbjct: 368275 gcaaaagcgattcccgta 368258 Score = 357 bits (180), Expect = 3e-95 Identities = 194/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185059 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 185001 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 185000 aataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatcc 184941 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184940 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 184881 Query: 184 gcaaaagcgattcccgta 201 |||||||||||||||||| Sbjct: 184880 gcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 128 gcaggcaagagacaacctggcgaactgaaacatcttagta 167 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 652 bits (329), Expect = 0.0 Identities = 530/591 (89%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 31 ctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcggggagttgaa 89 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||| |||||||| ||| || ||||||| | ||||| |||| ||||| Sbjct: 90 aataagcatagatccgtagattcccgaatggggtaacctttcacactgc-tgctcaatcc 148 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 149 atgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaaataaa 208 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 209 gcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacg 268 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcac 302 ||||||||||||||||||| |||||| ||||||||||||||||| | || | || |||| Sbjct: 269 gggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcac 328 Query: 303 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 362 |||||||||| |||||||||||| | |||||||||||| || |||||||||||||||| Sbjct: 329 cctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagtag 388 Query: 363 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 422 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 catgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 448 Query: 423 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 482 |||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 449 ctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattgggg 507 Query: 483 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 542 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | || Sbjct: 508 agtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagcca---gggct 561 Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 562 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggctt 612
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 98 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 157 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 158 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 218 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 277 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 278 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 337 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 338 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 397 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 398 gaccaccttgcaaggctaaatactcctgggtg 429 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 537 bits (271), Expect = e-149 Identities = 281/283 (99%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 311 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 370 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 371 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 550 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgc 239 Query: 551 gtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gtgcctgttgaagaatgagccggcgactcataggcagtggctt 282
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 521 bits (263), Expect = e-145 Identities = 367/396 (92%), Gaps = 6/396 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2630 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 2688 Query: 64 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 122 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 2689 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 2747 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 || | |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2748 cacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaa 2807 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2808 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 2867 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 300 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 2868 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 2927 Query: 301 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 360 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2928 accctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagt 2986 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaa 396 ||||| |||||||||||||||||||||||||||||| Sbjct: 2987 agcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 521 bits (263), Expect = e-145 Identities = 367/396 (92%), Gaps = 6/396 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 885 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 943 Query: 64 aataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatc 122 ||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||| Sbjct: 944 aataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatc 1002 Query: 123 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 182 || | |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 1003 cacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaa 1062 Query: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1122 Query: 243 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 300 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 1123 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 1182 Query: 301 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 360 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1183 accctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagt 1241 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaa 396 ||||| |||||||||||||||||||||||||||||| Sbjct: 1242 agcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 500 bits (252), Expect = e-138 Identities = 506/588 (86%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||| |||| |||||||||||||||||||| ||| Sbjct: 143950 ctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaa 144008 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| | Sbjct: 144009 aataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaattc 144068 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | ||| Sbjct: 144069 agaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaa 144128 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| ||| Sbjct: 144129 gcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacg 144188 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||| || || | || | ||||||||||| ||||||||| ||||| Sbjct: 144189 gggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcacc 144248 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | ||||||||||||| ||| | |||||| | |||| |||| |||||| Sbjct: 144249 ccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagc 144308 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 144309 atggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcc 144368 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| | Sbjct: 144369 tgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggga 144428 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| ||||||||||||||||||| || ||| | |||||| Sbjct: 144429 gtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggagaatgagatctc 144484 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 | ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 144485 taaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 144532 Score = 500 bits (252), Expect = e-138 Identities = 506/588 (86%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||| |||| |||||||||||||||||||| ||| Sbjct: 88901 ctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaa 88843 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||| | |||||||||||||||||| ||||||| |||||| |||||||||||||||| | Sbjct: 88842 aataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaattc 88783 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | ||| Sbjct: 88782 agaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaa 88723 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| ||| Sbjct: 88722 gcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacg 88663 Query: 244 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 303 |||||||||||||| || || | || | ||||||||||| ||||||||| ||||| Sbjct: 88662 gggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcacc 88603 Query: 304 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 363 | |||||| | ||||||||||||| ||| | |||||| | |||| |||| |||||| Sbjct: 88602 ccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagc 88543 Query: 364 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 423 |||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 88542 atggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcc 88483 Query: 424 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 483 || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| | Sbjct: 88482 tgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggga 88423 Query: 484 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctc 543 |||||||||||| |||||||| ||||||||||||||||||| || ||| | |||||| Sbjct: 88422 gtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggagaatgagatctc 88367 Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 | ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 88366 taaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggc 88319
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 259 aatacaagcgt 269 ||||||||||| Sbjct: 283 aatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 490 bits (247), Expect = e-135 Identities = 250/251 (99%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 162 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 222 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 282 Query: 259 aatacaagcgt 269 ||||||||||| Sbjct: 283 aatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 460 bits (232), Expect = e-126 Identities = 312/336 (92%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 21 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 80 |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 177078 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccgg 177137 Query: 81 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 140 |||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 177138 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagag 177196 Query: 141 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 200 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177197 aaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 177256 Query: 201 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 260 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177257 agtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaa 177316 Query: 261 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 319 ||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 177317 tacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 177376 Query: 320 cagtagccgaaagcatcactagcttatgctctgacc 355 |||||||||||||||||||||||||| ||||||||| Sbjct: 177377 cagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 105 bits (53), Expect = 2e-19 Identities = 53/53 (100%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 177457 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagc 169 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagc 169 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 438 bits (221), Expect = e-120 Identities = 231/233 (99%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 481 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 540 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 179 Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 232
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 426 bits (215), Expect = e-116 Identities = 489/575 (85%), Gaps = 19/575 (3%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 139224 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 139167 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 134 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 139166 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 139111 Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 139110 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 139051 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 254 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 139050 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 138991 Query: 255 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 310 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 138990 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 138932 Query: 311 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 370 | || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 138931 gttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggc 138872 Query: 371 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 430 ||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 138871 acgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtga 138812 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 138811 ccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaat 138752 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 550 ||||| ||||||||| ||||||| |||||||||||| | | | ||||||||||||| Sbjct: 138751 agaacatgaaaccgta---agctcccgagcagtgggaggagaattg-gatctctgaccgc 138696 Query: 551 gtgcctgttgaagaatgagccggcgactcataggc 585 |||||||||||||||||||||||||||| |||||| Sbjct: 138695 gtgcctgttgaagaatgagccggcgacttataggc 138661 Score = 426 bits (215), Expect = e-116 Identities = 489/575 (85%), Gaps = 19/575 (3%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||| ||||| ||||||||||| || | |||||||||||||| Sbjct: 82653 acgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatcc 82710 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----ca 134 |||||| ||| ||| ||| |||| || ||||||| ||||||||| | || || Sbjct: 82711 ggagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggca 82766 Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||||||| Sbjct: 82767 agagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgat 82826 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 254 ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 82827 tcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtggga 82886 Query: 255 gagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 310 |||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| | Sbjct: 82887 gagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacg 82945 Query: 311 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 370 | || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 82946 gttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggc 83005 Query: 371 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 430 ||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||||||| Sbjct: 83006 acgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtga 83065 Query: 431 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 490 ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 83066 ccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaat 83125 Query: 491 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgc 550 ||||| ||||||||| ||||||| |||||||||||| | | | ||||||||||||| Sbjct: 83126 agaacatgaaaccgta---agctcccgagcagtgggaggagaattg-gatctctgaccgc 83181 Query: 551 gtgcctgttgaagaatgagccggcgactcataggc 585 |||||||||||||||||||||||||||| |||||| Sbjct: 83182 gtgcctgttgaagaatgagccggcgacttataggc 83216
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 416 bits (210), Expect = e-113 Identities = 321/356 (90%), Gaps = 4/356 (1%) Strand = Plus / Minus Query: 238 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 297 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 298 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 357 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 478 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 537 ||| ||||||||||||| |||||||| | ||| ||||||||||||| || ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggagaatgg 5989 Query: 538 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 5988 aatctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggctt 5933 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 37 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 96 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 97 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 156 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 157 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 216 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 217 atgggagcagcctaaaccgt 236 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 414 bits (209), Expect = e-112 Identities = 216/217 (99%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 377 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 437 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 497 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcct 556 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctgaccgcgtgcct 179 Query: 557 gttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||| Sbjct: 180 gttgaagaatgagccggcgactcataggcagtggctt 216
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 93 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 152 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 153 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 212 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 213 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 272 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 273 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 332 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 333 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 392 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 393 gcaaggaccaccttgcaag 411 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 479 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 480 ggtagtgaaatagaacgtgaaacc 503 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||| ||| ||||||||||||||| |||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggctt 3197 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||| ||| |||||||||||||||| | |||||| |||||||| |||||| Sbjct: 3757 acgaggaagggcatagttagcgacgaaatgcttcagagagttgcaaataagcgtagatca 3698 Query: 79 ggag 82 |||| Sbjct: 3697 ggag 3694
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 410 bits (207), Expect = e-111 Identities = 263/280 (93%), Gaps = 5/280 (1%) Strand = Plus / Plus Query: 314 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 373 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 374 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 434 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 493 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 494 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtg 553 || |||||||| | |||||||||||||||||||||| | | ||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccgggg--ctctgaccgcgtg 237 Query: 554 cctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||||| Sbjct: 238 cctgttgaagaatgagccggcgactcataggcagtggctt 277
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 190 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 249 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 250 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 308 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 309 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 368 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 369 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 428 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 429 gaccgata 436 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 379 bits (191), Expect = e-102 Identities = 236/249 (94%), Gaps = 2/249 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 79739 ctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaa 79681 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 |||||||||||||||| ||||||| ||||||||||||||| |||||| |||||||| | Sbjct: 79680 aataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattc 79622 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79621 acgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 79562 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 79561 gcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacg 79502 Query: 244 gggttgtgg 252 ||||||||| Sbjct: 79501 gggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 369 bits (186), Expect = 7e-99 Identities = 200/204 (98%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75797 ctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 75855 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 75856 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgcggaatcc 75915 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75916 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 75975 Query: 184 gcaaaagcgattcccgtagtagcg 207 |||||||||||||||||||||||| Sbjct: 75976 gcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 474 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ggcgaactgaaacatcttag 165 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 299 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 358 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 479 gggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 317 bits (160), Expect = 2e-83 Identities = 392/461 (85%), Gaps = 10/461 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 222 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 281 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 282 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 341 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 342 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 400 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 401 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 460 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 461 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 501 |||||||||||||||| |||| |||||| |||||| ||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaa 520 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggc 604
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 295 bits (149), Expect = 8e-77 Identities = 218/239 (91%), Gaps = 4/239 (1%) Strand = Plus / Plus Query: 353 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 412 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 413 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 532 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 553 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 || | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 554 aatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 612 Score = 268 bits (135), Expect = 2e-68 Identities = 209/233 (89%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 19 ctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctgag 77 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 78 aacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattg 137 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 atagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 197 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 236 ||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 198 gcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 295 bits (149), Expect = 8e-77 Identities = 218/239 (91%), Gaps = 4/239 (1%) Strand = Plus / Plus Query: 353 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 412 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 413 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 532 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 566 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 || | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 567 aatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 625 Score = 268 bits (135), Expect = 2e-68 Identities = 209/233 (89%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 32 ctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcggggagctgag 90 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 91 aacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattg 150 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 atagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 210 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 236 ||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 211 gcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 293 bits (148), Expect = 3e-76 Identities = 217/238 (91%), Gaps = 4/238 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || || Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggaga 671 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 672 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 729 Score = 258 bits (130), Expect = 2e-65 Identities = 207/232 (89%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 136 ctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgggaagctgag 194 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| Sbjct: 195 aacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattg 254 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 atagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 314 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 ||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 315 gcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 307 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 307 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 307 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 307 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 365 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 366 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 425 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 426 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 485 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 486 gaaatagaacgtgaaaccgtgctgagctcc 515 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 276 bits (139), Expect = 8e-71 Identities = 233/263 (88%), Gaps = 6/263 (2%) Strand = Plus / Plus Query: 329 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 388 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 389 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 448 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 449 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 508 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 509 gagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatga 568 |||| ||||||||||||||| | | | |||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagcca---gggctctgaccgcgtgcctgttgaagaatga 606 Query: 569 gccggcgactcataggcagtggc 591 |||||||||||||| | |||||| Sbjct: 607 gccggcgactcataagtagtggc 629 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 128 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 187 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 188 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 247 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 248 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 307 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 308 a 308 | Sbjct: 325 a 325
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 139 acaacctggcgaactgaaacat 160 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 529 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 570 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 446 taccgtgagggaaaggtgaaaagaacc 472 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 139 acaacctggcgaactgaaacat 160 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 139 acaacctggcgaactgaaacat 160 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 139 acaacctggcgaactgaaacat 160 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 272 bits (137), Expect = 1e-69 Identities = 215/239 (89%), Gaps = 4/239 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 553 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 554 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 612 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 33 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 92 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 93 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 152 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 212 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaacc 234 |||||||||||||||||| |||| ||| ||||||| Sbjct: 213 ttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 272 bits (137), Expect = 1e-69 Identities = 215/239 (89%), Gaps = 4/239 (1%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 115109 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 115108 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 115050 Score = 272 bits (137), Expect = 1e-69 Identities = 215/239 (89%), Gaps = 4/239 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 86879 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 86880 ttttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 86938 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 115630 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 115571 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 115570 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 115511 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115510 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 115451 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaacc 234 |||||||||||||||||| |||| ||| ||||||| Sbjct: 115450 ttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 167 bits (84), Expect = 5e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 86358 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 86417 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 86418 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 86477 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86478 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 86537 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaacc 234 |||||||||||||||||| |||| ||| ||||||| Sbjct: 86538 ttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 272 bits (137), Expect = 1e-69 Identities = 215/239 (89%), Gaps = 4/239 (1%) Strand = Plus / Plus Query: 353 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 412 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 413 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 532 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| | Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 | || |||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 514 atag-aatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggc 571 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 24 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 82 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 83 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 142 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 143 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 203 tagcggcgagcgaaatgggagcagcctaaacc 234 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 270 bits (136), Expect = 5e-69 Identities = 139/140 (99%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1590 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 1649 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1650 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 1709 Query: 139 acaacctggcgaactgaaac 158 |||||||||||||||||||| Sbjct: 1710 acaacctggcgaactgaaac 1729
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 268 bits (135), Expect = 2e-68 Identities = 273/317 (86%), Gaps = 4/317 (1%) Strand = Plus / Plus Query: 275 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 334 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 335 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 394 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 395 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 454 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 455 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 514 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 515 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 574 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 597 Query: 575 gactcataggcagtggc 591 |||| |||||||||||| Sbjct: 598 gacttataggcagtggc 614 Score = 256 bits (129), Expect = 7e-65 Identities = 224/255 (87%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 32 ctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcg 90 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||| Sbjct: 91 aacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatcc 150 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 ataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 210 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| || Sbjct: 211 gcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcg 270 Query: 244 gggttgtgggagagc 258 ||||||||||||||| Sbjct: 271 gggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 268 bits (135), Expect = 2e-68 Identities = 273/317 (86%), Gaps = 4/317 (1%) Strand = Plus / Minus Query: 275 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 334 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 335 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 394 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 395 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 454 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 455 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 514 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 515 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 574 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 124668 Query: 575 gactcataggcagtggc 591 |||| |||||||||||| Sbjct: 124667 gacttataggcagtggc 124651 Score = 268 bits (135), Expect = 2e-68 Identities = 273/317 (86%), Gaps = 4/317 (1%) Strand = Plus / Plus Query: 275 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 334 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 335 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 394 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 395 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 454 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 455 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 514 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 515 ccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 574 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtggga-ggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggc 95198 Query: 575 gactcataggcagtggc 591 |||| |||||||||||| Sbjct: 95199 gacttataggcagtggc 95215 Score = 256 bits (129), Expect = 7e-65 Identities = 224/255 (87%), Gaps = 1/255 (0%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 125233 ctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcg 125175 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||| Sbjct: 125174 aacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatcc 125115 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125114 ataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 125055 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| || Sbjct: 125054 gcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcg 124995 Query: 244 gggttgtgggagagc 258 ||||||||||||||| Sbjct: 124994 gggttgtgggagagc 124980 Score = 256 bits (129), Expect = 7e-65 Identities = 224/255 (87%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||| | ||||||||||||||||||||||| || Sbjct: 94633 ctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcg 94691 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||| Sbjct: 94692 aacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatcc 94751 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa 183 || ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94752 ataggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaa 94811 Query: 184 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 243 ||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| || Sbjct: 94812 gcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcg 94871 Query: 244 gggttgtgggagagc 258 ||||||||||||||| Sbjct: 94872 gggttgtgggagagc 94886
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 262 bits (132), Expect = 1e-66 Identities = 215/240 (89%), Gaps = 7/240 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || | ||| |||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtgggaggaaga 547 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 | ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 548 a---gat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctt 603 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 194 ttcccgtagtagcggcgagcgaa 216 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 258 bits (130), Expect = 2e-65 Identities = 143/146 (97%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 448 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 507 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 508 tgagctcccaagcagtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatg 567 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatg 107932 Query: 568 agccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||| Sbjct: 107931 agccggcgactcataggcagtggctt 107906
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 254 bits (128), Expect = 3e-64 Identities = 214/240 (89%), Gaps = 7/240 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| ||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga---gga 583 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 || ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 584 aatagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctt 642 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 194 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 233 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 248 bits (125), Expect = 2e-62 Identities = 254/295 (86%), Gaps = 4/295 (1%) Strand = Plus / Plus Query: 299 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 358 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 4605 Query: 539 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 4660 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 4079 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 4138 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 4139 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 4197 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4198 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 4257 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaa 232 ||||||||||||||||||||||| |||||||| Sbjct: 4258 tgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 248 bits (125), Expect = 2e-62 Identities = 254/295 (86%), Gaps = 4/295 (1%) Strand = Plus / Plus Query: 299 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 358 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 572 Query: 539 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 627 Score = 210 bits (106), Expect = 4e-51 Identities = 188/214 (87%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||||||| ||| || |||| || |||||| ||||||| ||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagag 164 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaa 232 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 248 bits (125), Expect = 2e-62 Identities = 254/295 (86%), Gaps = 4/295 (1%) Strand = Plus / Plus Query: 299 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 358 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 478 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 479 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtg 538 ||| ||||||| ||||| |||||||| | || |||||||||||||| | | || Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgt- 572 Query: 539 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 627 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 164 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaa 232 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 3e-61 Identities = 210/238 (88%), Gaps = 7/238 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||| | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 aag----ccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 73.8 bits (37), Expect = 6e-10 Identities = 84/99 (84%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||||| || |||||||| ||||||||||| || | Sbjct: 19 ctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctgga 77 Query: 64 aataagcatagatccggagattcccaaataggtcaacct 102 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 78 aacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 3e-61 Identities = 210/238 (88%), Gaps = 7/238 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||| | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 aag----ccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 73.8 bits (37), Expect = 6e-10 Identities = 84/99 (84%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||||| || |||||||| ||||||||||| || | Sbjct: 1785 ctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcggggagctgga 1843 Query: 64 aataagcatagatccggagattcccaaataggtcaacct 102 || |||| | |||||| |||||||| |||||| |||||| Sbjct: 1844 aacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 282 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 341 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 342 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 401 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 402 accttgcaaggctaaatactcctgggtgaccga 434 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 236 bits (119), Expect = 7e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 19 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 77 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 89837 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 89778 Query: 78 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 137 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 89777 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 89719 Query: 138 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 188 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89718 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 236 bits (119), Expect = 7e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 77 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 433 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 492 Query: 78 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 137 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 493 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 551 Query: 138 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 188 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 552 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 428 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 301 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 360 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 361 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 420 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 421 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 480 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 481 gtagtgaaatagaacgtgaaa 501 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 8e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 102 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 103 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 162 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 163 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 222 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 223 gcagcctaaaccgtgaaaacggggttg 249 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||| |||| ||||||||||||||||||||||||||||| | |||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggctt 618
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 224 bits (113), Expect = 3e-55 Identities = 198/225 (88%), Gaps = 6/225 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 578 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 -cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 39 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 98 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 99 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 158 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 159 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 218 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 219 gggagcagcctaaaccg 235 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 222 bits (112), Expect = 1e-54 Identities = 214/246 (86%), Gaps = 4/246 (1%) Strand = Plus / Plus Query: 347 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 406 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 407 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 466 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 467 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 526 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 527 agggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 586 | | ||| | |||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 557 a-gaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagata 615 Query: 587 gtggct 592 |||||| Sbjct: 616 gtggct 621 Score = 188 bits (95), Expect = 1e-44 Identities = 187/215 (86%), Gaps = 2/215 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| ||||||||||| |||||||||||| ||||| | | ||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatcc 105 Query: 79 ggagattcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaaga 137 |||||||||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||| Sbjct: 106 ggagattcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataaga 164 Query: 138 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 197 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 165 gacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttc 224 Query: 198 cgtagtagcggcgagcgaaatgggagcagcctaaa 232 | ||||||||||||||||||||||| |||||||| Sbjct: 225 ctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 496 gtgaaa 501 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 ag 223 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 496 gtgaaa 501 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 agcagcctaa 231 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 214 bits (108), Expect = 2e-52 Identities = 204/234 (87%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 478 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 537 ||| ||||||||||||| ||||||| | |||| |||||||||||||| ||| | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattg- 560 Query: 538 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 561 aacctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 614 Score = 190 bits (96), Expect = 4e-45 Identities = 201/236 (85%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| |||||||||||||||||||||| || || ||||||| |||| Sbjct: 46 acgaagaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatcc 105 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 106 gaagattcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagag 165 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 | ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccc 225 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 254 ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 226 tcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccg 504 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 39 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 98 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 99 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 158 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 159 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 218 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 219 gggagcagcctaaacc 234 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgact 578 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 316 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 375 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 376 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 435 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 436 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 495 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 496 gtgaaa 501 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 43 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 101 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 102 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 161 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 162 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 221 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 222 ag 223 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 541 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 582 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 210 bits (106), Expect = 4e-51 Identities = 206/238 (86%), Gaps = 6/238 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga---gga 690 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 691 ttttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 194 ttcccgtagtagcggcgagcgaaatggga 222 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 210 bits (106), Expect = 4e-51 Identities = 205/238 (86%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| ||||||||||||||||||||||| || || ||| |||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatcc 105 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 | |||||||| |||||| |||||| || ||| |||| ||| ||| | |||| |||| Sbjct: 106 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagag 165 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 225 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 256 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 226 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 478 tgggtagtgaaatagaacgtgaaacc 503 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 614
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 208 bits (105), Expect = 2e-50 Identities = 207/239 (86%), Gaps = 4/239 (1%) Strand = Plus / Plus Query: 353 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 412 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 413 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 532 |||| ||| ||||||||||| |||||||| | |||| |||||||||||| | | Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtggga-gaag 959 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 || | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 960 aatctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggc 1018 Score = 172 bits (87), Expect = 8e-40 Identities = 187/218 (85%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| ||||||||||||||||||| | || || ||| || | || Sbjct: 449 acgatgaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaaccc 506 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||| Sbjct: 507 ggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagag 565 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 236 |||||| ||||||||||| |||| ||||||||||||| Sbjct: 626 ttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 130 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 189 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 190 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 234 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgact 578 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 153 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 212 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 213 cgaaatgggagcagcctaaacc 234 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 204 bits (103), Expect = 2e-49 Identities = 209/242 (86%), Gaps = 8/242 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||| Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaaccc 544 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 531 | |||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 545 ctgttggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggca 599 Query: 532 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||| || | |||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct: 600 aaaaaagagc-ctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggc 658 Query: 592 tt 593 || Sbjct: 659 tt 660 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| |||||||||| Sbjct: 218 cgagcgaaccgggaagagcctaaacc 243
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 9e-49 Identities = 210/239 (87%), Gaps = 9/239 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 472 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 532 ||| || || ||||||||||||| ||||||||| | ||| ||||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggg 616 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 617 --tttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggc 672 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 194 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 202 bits (102), Expect = 9e-49 Identities = 207/239 (86%), Gaps = 11/239 (4%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 531 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 629 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 683 Query: 532 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 590 | || | | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 684 gtaa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 738 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 353 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 412 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 413 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 473 cc 474 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 132 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 191 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 192 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 545 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggctt 610 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||||||||||||| | | ||||||||||||||||||||||| ||| | || |||||| Sbjct: 46 acgaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgagatcc 105 Query: 79 ggagat 84 |||||| Sbjct: 106 ggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 478 tgggtagtgaaatagaacgtgaaacc 503 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| ||||||||||||||||||||||| || || ||| ||| |||| Sbjct: 1813 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatcc 1872 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 1873 gaagattcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagag 1932 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 1933 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 1992 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 254 |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1993 ttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 200 bits (101), Expect = 4e-48 Identities = 208/241 (86%), Gaps = 7/241 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 532 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 593 t 593 | Sbjct: 621 t 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 200 bits (101), Expect = 4e-48 Identities = 208/241 (86%), Gaps = 7/241 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 532 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 593 t 593 | Sbjct: 621 t 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 153 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 212 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 213 cgaaatgggagcagcctaaacc 234 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 209 cgagcgaaatgggagcagcctaaac 233 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 48 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 102 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 48 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 102 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 153 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 212 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 213 cgaaatgggagcagcctaaacc 234 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 641
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 151758 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 42445
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 48 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 102 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 209 cgagcgaaatgggagcagcctaaac 233 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 48 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 102 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 617
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 702
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 194 bits (98), Expect = 2e-46 Identities = 209/243 (86%), Gaps = 11/243 (4%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 414 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 530 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 531 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 590 | | | | |||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 578 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtgg 634 Query: 591 ctt 593 ||| Sbjct: 635 ctt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 153 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 212 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 213 cgaa 216 |||| Sbjct: 238 cgaa 241
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 73.8 bits (37), Expect = 6e-10 Identities = 84/99 (84%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| ||||||||| | || |||||||| ||||||||||| || | Sbjct: 11 ctaggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctgga 69 Query: 64 aataagcatagatccggagattcccaaataggtcaacct 102 || ||||| ||||||||||||||| |||||| |||||| Sbjct: 70 aacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgact 578 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 194 bits (98), Expect = 2e-46 Identities = 209/243 (86%), Gaps = 11/243 (4%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 414 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 530 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 531 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 590 | | | | |||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 559 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtgg 615 Query: 591 ctt 593 ||| Sbjct: 616 ctt 618 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 153 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 212 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 213 cgaa 216 |||| Sbjct: 219 cgaa 222
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 348 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 407 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 408 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 467 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 468 gaacccccagtgggtagtgaaataga 493 ||||||||| |||| ||||||||||| Sbjct: 458 gaacccccactggggagtgaaataga 483 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 141 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 200 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 201 agtagcggcgagcgaaatgggagcagcctaaacc 234 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 577 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcgg 54 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 477 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 478 tgggtagtgaaatagaacgtgaaacc 503 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 194 bits (98), Expect = 2e-46 Identities = 203/238 (85%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||||| |||||||||||||||| |||||| || || ||| |||||||| Sbjct: 3080 acgaagaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatcc 3139 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 | |||||||| |||||| |||||| || ||| |||| ||| ||| |||| |||| Sbjct: 3140 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagag 3199 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 3200 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 3259 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 256 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3260 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 3648
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgact 578 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 39 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 98 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 99 acct 102 |||| Sbjct: 24914 acct 24917
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 194 bits (98), Expect = 2e-46 Identities = 209/243 (86%), Gaps = 11/243 (4%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 414 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 472 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 530 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 531 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 590 | | | | |||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 578 gttatgg---ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtgg 634 Query: 591 ctt 593 ||| Sbjct: 635 ctt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 153 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 212 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 213 cgaa 216 |||| Sbjct: 238 cgaa 241
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 357 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 416 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 417 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 476 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 477 gtgggtagtgaaatagaacgtgaaaccgt 505 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 551 gtgcctgttgaagaatgagccggcgactcatagg 584 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 625 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 48 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 102 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 |||| |||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 634
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 188 bits (95), Expect = 1e-44 Identities = 158/177 (89%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 472 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 140 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 199 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 200 tagtagcggcgagcgaaatgggagcagcctaaac 233 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157 Score = 79.8 bits (40), Expect = 9e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggctt 170891 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggctt 122035 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/99 (82%), Gaps = 1/99 (1%) Strand = Plus / Minus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| |||||||||||||| |||||||| || ||||||| || | Sbjct: 171487 ctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgga 171429 Query: 64 aataagcatagatccggagattcccaaataggtcaacct 102 | |||| ||||||||||||||| |||||| |||||| Sbjct: 171428 agcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/99 (82%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| |||||||||||||| |||||||| || ||||||| || | Sbjct: 121439 ctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgga 121497 Query: 64 aataagcatagatccggagattcccaaataggtcaacct 102 | |||| ||||||||||||||| |||||| |||||| Sbjct: 121498 agcaagctctgatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 529 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggctt 626 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/99 (82%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| |||||||||||||| |||||||| || ||||||| || | Sbjct: 30 ctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccggggagctgga 88 Query: 64 aataagcatagatccggagattcccaaataggtcaacct 102 | |||| ||||||||||||||| |||||| |||||| Sbjct: 89 agcaagctctgatccggagattcccgaatagggcaacct 127
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 186 bits (94), Expect = 6e-44 Identities = 197/226 (87%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 472 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 532 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 533 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 578 | || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 ta---ga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 194 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 472 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 473 cccagtgggtagtgaaatagaacgtgaaaccgt 505 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 182/218 (83%), Gaps = 2/218 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||| | || |||||||| ||||||||||| || | | ||| | ||||| Sbjct: 33 acgatgaagggcgtggtaaccgacgaaacgcttcggggagctggatacgagctttgatcc 92 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc-aggcaaga 137 | |||||||| |||||| |||||| || ||| | | ||||| ||| ||| | | |||| Sbjct: 93 gaagattcccgaatagggcaacctcttggactccttagtgaattcat-agctaagaaaga 151 Query: 138 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 197 || |||| || ||| ||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 152 gataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcc 211 Query: 198 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 | ||||||||||||||||||||||| |||||||||||| Sbjct: 212 cttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgact 578 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgt 505 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 24 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 83 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 84 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 143 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 144 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 203 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 204 agcggcgagcgaaatgggagcagcctaaaccg 235 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 593 ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggctt 607
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 180 bits (91), Expect = 3e-42 Identities = 107/111 (96%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 462 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 521 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 522 gtgggagggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 572 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtggga-ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 48 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 107 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 108 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 167 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 168 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 227 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 228 ctaaacc 234 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 149 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 208 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 209 cgagcgaaatgggagcagcctaaacc 234 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgact 578 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68893.1|CHCIRRNX1 Chloroplast Chlamydomonas indica rrnL gene, exon 1 Length = 810 Score = 178 bits (90), Expect = 1e-41 Identities = 203/238 (85%), Gaps = 7/238 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 447 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 506 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| | | ||||||| ||||||| ||| |||||||||| Sbjct: 507 taaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtaaaaagaaccc 565 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 | ||| ||||||||||||| |||||||| | |||| |||||||||||||| | Sbjct: 566 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggaggttca 622 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 || || ||||||||||||||||||||||||||| | |||||| ||||| |||||| Sbjct: 623 aaagga---ctgaccgcgtgcctgttgaagaatgagtctgcgacttatagggagtggc 677 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||||||||| Sbjct: 159 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaaagcgat 218 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 234 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 258
>emb|X68913.1|CHCMRRNX1 Chloroplast C.moewusii rrnL gene, exon 1 Length = 1119 Score = 178 bits (90), Expect = 1e-41 Identities = 203/238 (85%), Gaps = 7/238 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 524 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 583 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| | | ||||||| ||||||| ||| |||||||||| Sbjct: 584 taaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtaaaaagaaccc 642 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 | ||| ||||||||||||| |||||||| | |||| |||||||||||||| | Sbjct: 643 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggaggttca 699 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 || || ||||||||||||||||||||||||||| | |||||| ||||| |||||| Sbjct: 700 aaagga---ctgaccgcgtgcctgttgaagaatgagtctgcgacttatagggagtggc 754 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||||||||| Sbjct: 159 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaaagcgat 218 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 234 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 258
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 474 ccagtgggtagtgaaatagaacgtgaaacc 503 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 48 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 107 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 108 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 167 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 168 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 227 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 228 ctaaacc 234 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 543 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 592 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene Length = 8146 Score = 178 bits (90), Expect = 1e-41 Identities = 203/238 (85%), Gaps = 7/238 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 1196 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 1255 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| | | ||||||| ||||||| ||| |||||||||| Sbjct: 1256 taaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtaaaaagaaccc 1314 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 | ||| ||||||||||||| |||||||| | |||| |||||||||||||| | Sbjct: 1315 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggaggttca 1371 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 || || ||||||||||||||||||||||||||| | |||||| ||||| |||||| Sbjct: 1372 aaagga---ctgaccgcgtgcctgttgaagaatgagtctgcgacttatagggagtggc 1426 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 135 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 194 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||||||||| Sbjct: 831 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaaagcgat 890 Query: 195 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 234 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 891 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 930
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 203/238 (85%), Gaps = 7/238 (2%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 533 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 534 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggc 728 Score = 119 bits (60), Expect = 1e-23 Identities = 178/216 (82%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 19 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 78 |||| ||||||||| | || | ||||||||||||| |||| || ||| |||| ||| | Sbjct: 146 acgatgaagggcgtggaaaccaacgaaatgcttcgaggagctggaaacaagctatgattc 205 Query: 79 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 138 |||||||||| |||||| |||||||||| ||| ||| ||||| ||| ||| ||||| Sbjct: 206 ggagattcccgaatagggcaaccttttatactacctattgaattcatagataggaaagag 265 Query: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 |||||| | ||| |||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 266 acaacccagtgaag-gaaacatcttagtagctggaggaaaagaaagcaaacgcgattccc 324 Query: 199 gtagtagcggcgagcgaaatgggagcagcctaaacc 234 ||||||||||||||||||| | ||||||||||| Sbjct: 325 ttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 176 bits (89), Expect = 5e-41 Identities = 154/175 (88%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 4 ctaggcacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaa 63 |||||||||||| |||| |||||||||| || |||||||| ||||||||||| |||| Sbjct: 733 ctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcggggagctgaa 791 Query: 64 aataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatcc 123 || |||||| ||||||||||||||| |||||| |||||| || |||| |||||||||| | Sbjct: 792 aagaagcattgatccggagattcccgaatagggcaacctcttgaacttcctgctgaattc 851 Query: 124 atgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 ataggcaggatagagacaacctggcgaactgaaacatcttagtagccagaggaaa 906
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 357 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 416 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 417 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 476 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 477 gtgggtagtgaaatagaacgtgaaaccgt 505 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 542 tctgaccgcgtgcctgttgaagaatgagccggcga 576 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 474 ccagt-gggtagtgaaatagaacgtgaaaccgt 505 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 194 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 235 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgact 578 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 207 ggcgagcgaaatgggagcagcctaaacc 234 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 584 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 207 ggcgagcgaaatgggagcagcctaaacc 234 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 584 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 150 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 209 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 210 gagcgaaatgggagcagcctaaacc 234 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 207 ggcgagcgaaatgggagcagcctaaacc 234 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 207 ggcgagcgaaatgggagcagcctaaacc 234 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 584 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 207 ggcgagcgaaatgggagcagcctaaacc 234 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 207 ggcgagcgaaatgggagcagcctaaacc 234 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 354 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 413 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 414 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 473 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 474 ccagtgggtagtgaaatagaacgtgaaaccgtg 506 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 207 ggcgagcgaaatgggagcagcctaaacc 234 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 544 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 591 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,064,547 Number of Sequences: 3902068 Number of extensions: 4064547 Number of successful extensions: 118431 Number of sequences better than 10.0: 26620 Number of HSP's better than 10.0 without gapping: 26444 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74229 Number of HSP's gapped (non-prelim): 42189 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
