ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3e16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK063232.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-135
2gb|AY112210.1| Zea mays CL16630_1 mRNA sequence 216 5e-53
3gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome... 153 6e-34
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 153 6e-34
6gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 ... 54 4e-04
7ref|NM_116401.2| Arabidopsis thaliana CRK (CROOKED) AT4G01710 (C... 42 1.7
8ref|XM_366660.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 42 1.7
9gb|AY143806.1| Arabidopsis thaliana At4g01710/T15B16_22 mRNA, co... 42 1.7
10gb|AY052191.1| Arabidopsis thaliana AT4g01710/T15B16_22 mRNA, co... 42 1.7
11emb|BX829142.1|CNS0A4DP Arabidopsis thaliana Full-length cDNA Co... 42 1.7
12emb|BX828931.1|CNS0A2QL Arabidopsis thaliana Full-length cDNA Co... 42 1.7
13gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC... 42 1.7
14gb|BC054794.1| Mus musculus cryptochrome 2 (photolyase-like), mR... 40 6.7
15gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.7
16ref|NM_009963.3| Mus musculus cryptochrome 2 (photolyase-like) (... 40 6.7
17ref|XM_994689.1| PREDICTED: Mus musculus cryptochrome 2 (photoly... 40 6.7
18gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosom... 40 6.7
19emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on ch... 40 6.7
20emb|BX058507.1|CNS09HB3 Single read from an extremity of a full-... 40 6.7
21emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.7
22emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.7
23gb|BC066799.1| Mus musculus cryptochrome 2 (photolyase-like), mR... 40 6.7
24dbj|AK133781.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 6.7
25dbj|AK041696.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 6.7
26dbj|AK053012.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 6.7
27dbj|AK172994.1| Mus musculus mRNA for mKIAA0658 protein 40 6.7
28dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.7
29gb|AF156987.1|AF156987 Mus musculus cryptochrome 2 (Cry2) mRNA, ... 40 6.7
30dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.7
31emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on ch... 40 6.7
32dbj|AB003433.1| Mus musculus mRNA for photolyase/blue-light rece... 40 6.7 
>dbj|AK063232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F06, full
           insert sequence
          Length = 751

 Score =  488 bits (246), Expect = e-135
 Identities = 363/402 (90%)
 Strand = Plus / Plus

                                                                       
Query: 92  cggcggcgtacctcgagacggacgagaacctggaggccctcatcagccgcatcgagcaga 151
           ||||||| ||||||||  | ||||||||||| |||||| |||||  ||||||||||||||
Sbjct: 68  cggcggcctacctcgacgccgacgagaacctcgaggccatcatctcccgcatcgagcaga 127

                                                                       
Query: 152 agtcacgcaagatcgagaccctcctcaagcagtcgaagccggtggaggccctgaagacgg 211
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 128 agtcccgcaagatcgagaccctcctcaagcagtcgaagccggtggaggccctcaagacgg 187

                                                                       
Query: 212 cgctggaggggtcgcccctcaagacccgcgacgagcgatgcaagtcggcgaactggatcg 271
           |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cgctcgaggggacgcccctcaagacccgcgacgagcgatgcaagtcggcgaactggatcg 247

                                                                       
Query: 272 tggtgcaccgcgccatgatggcgatcagggacatcgatggcatgttcaactcactggata 331
           ||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||| 
Sbjct: 248 tggtgcaccgcgcgatgatggcgatcagggacgtcgacggcatgttcaactcgctggatc 307

                                                                       
Query: 332 ccgagtactatgacatcctcatgaagtacctgtacagaggtttgtccaccggcgaccggc 391
           |||||||||| |||||||| |||||||||||||||||||||||||| || || || ||||
Sbjct: 308 ccgagtactacgacatcctgatgaagtacctgtacagaggtttgtcaacaggggatcggc 367

                                                                       
Query: 392 cgacgtgtgaccagtgcctcaaaatacatgagaagctgacggagagagcaggcttaggat 451
           | || |||||||||||||||||||| ||||| || || || |||| ||||||||||||||
Sbjct: 368 caacatgtgaccagtgcctcaaaattcatgaaaaactcaccgagaaagcaggcttaggat 427

                                                     
Query: 452 gcatactgcggtcactcgccgacactgtcaacaccgtgtgag 493
           | ||| |||| ||||| || || || || |||||||||||||
Sbjct: 428 gtatattgcgctcacttgctgataccgtaaacaccgtgtgag 469
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>gb|AY112210.1| Zea mays CL16630_1 mRNA sequence
          Length = 604

 Score =  216 bits (109), Expect = 5e-53
 Identities = 151/165 (91%)
 Strand = Plus / Plus

                                                                       
Query: 91  tcggcggcgtacctcgagacggacgagaacctggaggccctcatcagccgcatcgagcag 150
           |||||||||||||  ||  |||||||||||||||||||| |||||| |||||| ||||||
Sbjct: 61  tcggcggcgtaccctgatgcggacgagaacctggaggccatcatcacccgcatagagcag 120

                                                                       
Query: 151 aagtcacgcaagatcgagaccctcctcaagcagtcgaagccggtggaggccctgaagacg 210
           ||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 121 aagtcccgaaagatcgagacccttctcaagcagtcgaagccggtggaggccctaaagacg 180

                                                        
Query: 211 gcgctggaggggtcgcccctcaagacccgcgacgagcgatgcaag 255
           ||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 181 gcgctcgaggggtcaccgctcaagacccgcgacgagcgatgcaag 225



 Score =  137 bits (69), Expect = 4e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                       
Query: 255 gtcggcgaactggatcgtggtgcaccgcgccatgatggcgatcagggacatcgatggcat 314
           ||||||||||||||||||||||||||||||  |||||||||| |||||| | || |||||
Sbjct: 241 gtcggcgaactggatcgtggtgcaccgcgcgttgatggcgattagggacgtagacggcat 300

                                                        
Query: 315 gttcaactcactggataccgagtactatgacatcctcatgaagta 359
           ||||||||| |||||| |||||||||| |||||||||||||||||
Sbjct: 301 gttcaactccctggatcccgagtactacgacatcctcatgaagta 345
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>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0038B22, complete sequence
          Length = 177557

 Score =  153 bits (77), Expect = 6e-34
 Identities = 98/105 (93%)
 Strand = Plus / Plus

                                                                         
Query: 254   agtcggcgaactggatcgtggtgcaccgcgccatgatggcgatcagggacatcgatggca 313
             ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 77408 agtcggcgaactggatcgtggtgcaccgcgcgatgatggcgatcagggacgtcgacggca 77467

                                                          
Query: 314   tgttcaactcactggataccgagtactatgacatcctcatgaagt 358
             |||||||||| |||||| |||||||||| |||||||| |||||||
Sbjct: 77468 tgttcaactcgctggatcccgagtactacgacatcctgatgaagt 77512



 Score =  121 bits (61), Expect = 2e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                         
Query: 183   gtcgaagccggtggaggccctgaagacggcgctggaggggtcgcccctcaagacccgcga 242
             ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct: 77254 gtcgaagccggtggaggccctcaagacggcgctcgaggggacgcccctcaagacccgcga 77313

                          
Query: 243   cgagcgatgcaag 255
             |||||||||||||
Sbjct: 77314 cgagcgatgcaag 77326



 Score =  113 bits (57), Expect = 6e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                         
Query: 357   gtacctgtacagaggtttgtccaccggcgaccggccgacgtgtgaccagtgcctcaaaat 416
             ||||||||||||||||||||| || || || ||||| || ||||||||||||||||||||
Sbjct: 78569 gtacctgtacagaggtttgtcaacaggggatcggccaacatgtgaccagtgcctcaaaat 78628

                                                                         
Query: 417   acatgagaagctgacggagagagcaggcttaggatgcatactgcggtcactcgccgacac 476
              ||||| || || || |||| ||||||||||||||| ||| |||| ||||| || || ||
Sbjct: 78629 tcatgaaaaactcaccgagaaagcaggcttaggatgtatattgcgctcacttgctgatac 78688

                              
Query: 477   tgtcaacaccgtgtgag 493
              || |||||||||||||
Sbjct: 78689 cgtaaacaccgtgtgag 78705



 Score =  113 bits (57), Expect = 6e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                         
Query: 92    cggcggcgtacctcgagacggacgagaacctggaggccctcatcagccgcatcgagcaga 151
             ||||||| ||||||||  | ||||||||||| |||||| |||||  ||||||||||||||
Sbjct: 77052 cggcggcctacctcgacgccgacgagaacctcgaggccatcatctcccgcatcgagcaga 77111

                                              
Query: 152   agtcacgcaagatcgagaccctcctcaagcagt 184
             |||| ||||||||||||||||||||||||||||
Sbjct: 77112 agtcccgcaagatcgagaccctcctcaagcagt 77144
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  153 bits (77), Expect = 6e-34
 Identities = 98/105 (93%)
 Strand = Plus / Plus

                                                                            
Query: 254      agtcggcgaactggatcgtggtgcaccgcgccatgatggcgatcagggacatcgatggca 313
                ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 19900341 agtcggcgaactggatcgtggtgcaccgcgcgatgatggcgatcagggacgtcgacggca 19900400

                                                             
Query: 314      tgttcaactcactggataccgagtactatgacatcctcatgaagt 358
                |||||||||| |||||| |||||||||| |||||||| |||||||
Sbjct: 19900401 tgttcaactcgctggatcccgagtactacgacatcctgatgaagt 19900445



 Score =  121 bits (61), Expect = 2e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                            
Query: 183      gtcgaagccggtggaggccctgaagacggcgctggaggggtcgcccctcaagacccgcga 242
                ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct: 19900187 gtcgaagccggtggaggccctcaagacggcgctcgaggggacgcccctcaagacccgcga 19900246

                             
Query: 243      cgagcgatgcaag 255
                |||||||||||||
Sbjct: 19900247 cgagcgatgcaag 19900259



 Score =  113 bits (57), Expect = 6e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                            
Query: 357      gtacctgtacagaggtttgtccaccggcgaccggccgacgtgtgaccagtgcctcaaaat 416
                ||||||||||||||||||||| || || || ||||| || ||||||||||||||||||||
Sbjct: 19901502 gtacctgtacagaggtttgtcaacaggggatcggccaacatgtgaccagtgcctcaaaat 19901561

                                                                            
Query: 417      acatgagaagctgacggagagagcaggcttaggatgcatactgcggtcactcgccgacac 476
                 ||||| || || || |||| ||||||||||||||| ||| |||| ||||| || || ||
Sbjct: 19901562 tcatgaaaaactcaccgagaaagcaggcttaggatgtatattgcgctcacttgctgatac 19901621

                                 
Query: 477      tgtcaacaccgtgtgag 493
                 || |||||||||||||
Sbjct: 19901622 cgtaaacaccgtgtgag 19901638



 Score =  113 bits (57), Expect = 6e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                            
Query: 92       cggcggcgtacctcgagacggacgagaacctggaggccctcatcagccgcatcgagcaga 151
                ||||||| ||||||||  | ||||||||||| |||||| |||||  ||||||||||||||
Sbjct: 19899985 cggcggcctacctcgacgccgacgagaacctcgaggccatcatctcccgcatcgagcaga 19900044

                                                 
Query: 152      agtcacgcaagatcgagaccctcctcaagcagt 184
                |||| ||||||||||||||||||||||||||||
Sbjct: 19900045 agtcccgcaagatcgagaccctcctcaagcagt 19900077
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  153 bits (77), Expect = 6e-34
 Identities = 98/105 (93%)
 Strand = Plus / Plus

                                                                            
Query: 254      agtcggcgaactggatcgtggtgcaccgcgccatgatggcgatcagggacatcgatggca 313
                ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 20185320 agtcggcgaactggatcgtggtgcaccgcgcgatgatggcgatcagggacgtcgacggca 20185379

                                                             
Query: 314      tgttcaactcactggataccgagtactatgacatcctcatgaagt 358
                |||||||||| |||||| |||||||||| |||||||| |||||||
Sbjct: 20185380 tgttcaactcgctggatcccgagtactacgacatcctgatgaagt 20185424



 Score =  121 bits (61), Expect = 2e-24
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                            
Query: 183      gtcgaagccggtggaggccctgaagacggcgctggaggggtcgcccctcaagacccgcga 242
                ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct: 20185166 gtcgaagccggtggaggccctcaagacggcgctcgaggggacgcccctcaagacccgcga 20185225

                             
Query: 243      cgagcgatgcaag 255
                |||||||||||||
Sbjct: 20185226 cgagcgatgcaag 20185238



 Score =  113 bits (57), Expect = 6e-22
 Identities = 117/137 (85%)
 Strand = Plus / Plus

                                                                            
Query: 357      gtacctgtacagaggtttgtccaccggcgaccggccgacgtgtgaccagtgcctcaaaat 416
                ||||||||||||||||||||| || || || ||||| || ||||||||||||||||||||
Sbjct: 20186481 gtacctgtacagaggtttgtcaacaggggatcggccaacatgtgaccagtgcctcaaaat 20186540

                                                                            
Query: 417      acatgagaagctgacggagagagcaggcttaggatgcatactgcggtcactcgccgacac 476
                 ||||| || || || |||| ||||||||||||||| ||| |||| ||||| || || ||
Sbjct: 20186541 tcatgaaaaactcaccgagaaagcaggcttaggatgtatattgcgctcacttgctgatac 20186600

                                 
Query: 477      tgtcaacaccgtgtgag 493
                 || |||||||||||||
Sbjct: 20186601 cgtaaacaccgtgtgag 20186617



 Score =  113 bits (57), Expect = 6e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                            
Query: 92       cggcggcgtacctcgagacggacgagaacctggaggccctcatcagccgcatcgagcaga 151
                ||||||| ||||||||  | ||||||||||| |||||| |||||  ||||||||||||||
Sbjct: 20184964 cggcggcctacctcgacgccgacgagaacctcgaggccatcatctcccgcatcgagcaga 20185023

                                                 
Query: 152      agtcacgcaagatcgagaccctcctcaagcagt 184
                |||| ||||||||||||||||||||||||||||
Sbjct: 20185024 agtcccgcaagatcgagaccctcctcaagcagt 20185056
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>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region
          Length = 90923

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 46/51 (90%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                                
Query: 310   ggcatgttcaactcactggatacc-gagtactatgacatcctcatgaagta 359
             ||||||||||| || |||||| || |||||||||||||||||||| |||||
Sbjct: 48738 ggcatgttcaattctctggatccctgagtactatgacatcctcataaagta 48788



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 60/71 (84%), Gaps = 2/71 (2%)
 Strand = Plus / Plus

                                                                         
Query: 186   gaagccggtggaggccctg--aagacggcgctggaggggtcgcccctcaagacccgcgac 243
             |||||| ||||||||| ||  || ||||| || ||||||||||  ||| |||||| ||||
Sbjct: 48557 gaagccagtggaggccttggaaaaacggcactcgaggggtcgctgctccagacccacgac 48616

                        
Query: 244   gagcgatgcaa 254
             |||||||||||
Sbjct: 48617 gagcgatgcaa 48627



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 131   tcatcagccgcatcgagcagaagtcacgcaagatcgagaccctcct 176
             |||||| ||||||| | |||||||| || |||||||||||| ||||
Sbjct: 48428 tcatcacccgcatctaacagaagtctcgaaagatcgagaccttcct 48473
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>ref|NM_116401.2| Arabidopsis thaliana CRK (CROOKED) AT4G01710 (CRK) mRNA, complete
           cds
          Length = 576

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 343 gacatcctcatgaagtacctgtacagagg 371
           ||||| |||||||||||| ||||||||||
Sbjct: 273 gacattctcatgaagtacttgtacagagg 301
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>ref|XM_366660.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02736.4) partial mRNA
          Length = 753

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 466 ctcgccgacactgtcaacacc 486
           |||||||||||||||||||||
Sbjct: 43  ctcgccgacactgtcaacacc 63
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>gb|AY143806.1| Arabidopsis thaliana At4g01710/T15B16_22 mRNA, complete cds
          Length = 399

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 343 gacatcctcatgaagtacctgtacagagg 371
           ||||| |||||||||||| ||||||||||
Sbjct: 250 gacattctcatgaagtacttgtacagagg 278
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>gb|AY052191.1| Arabidopsis thaliana AT4g01710/T15B16_22 mRNA, complete cds
          Length = 516

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 343 gacatcctcatgaagtacctgtacagagg 371
           ||||| |||||||||||| ||||||||||
Sbjct: 273 gacattctcatgaagtacttgtacagagg 301
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>emb|BX829142.1|CNS0A4DP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL75ZC11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 543

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 343 gacatcctcatgaagtacctgtacagagg 371
           ||||| |||||||||||| ||||||||||
Sbjct: 237 gacattctcatgaagtacttgtacagagg 265
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>emb|BX828931.1|CNS0A2QL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL52ZB11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 508

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 343 gacatcctcatgaagtacctgtacagagg 371
           ||||| |||||||||||| ||||||||||
Sbjct: 253 gacattctcatgaagtacttgtacagagg 281
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>gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC 6J18, genomic sequence
          Length = 111865

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 466    ctcgccgacactgtcaacacc 486
              |||||||||||||||||||||
Sbjct: 106585 ctcgccgacactgtcaacacc 106565
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>gb|BC054794.1| Mus musculus cryptochrome 2 (photolyase-like), mRNA (cDNA clone
           MGC:65642 IMAGE:6834104), complete cds
          Length = 3975

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 517 aggccctcatcagccgcatggagc 540
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 373     ttgtccaccggcgaccggccgacg 396
               |||||||||||||||| |||||||
Sbjct: 2534204 ttgtccaccggcgaccagccgacg 2534181
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>ref|NM_009963.3| Mus musculus cryptochrome 2 (photolyase-like) (Cry2), mRNA
          Length = 3970

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 520 aggccctcatcagccgcatggagc 543
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>ref|XM_994689.1| PREDICTED: Mus musculus cryptochrome 2 (photolyase-like),
           transcript variant 5 (Cry2), mRNA
          Length = 2193

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 561 aggccctcatcagccgcatggagc 584
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>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence
          Length = 205352

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    ccagtgcctcaaaatacatg 421
              ||||||||||||||||||||
Sbjct: 104403 ccagtgcctcaaaatacatg 104384
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>emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on chromosome 10 Contains two
             novel genes (FLJ36774) and five CpG islands, complete
             sequence
          Length = 158335

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   cagtgcctcaaaatacatga 422
             ||||||||||||||||||||
Sbjct: 45397 cagtgcctcaaaatacatga 45378
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>emb|BX058507.1|CNS09HB3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC38DG09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 606

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 tgcaccgcgccatgatggcg 294
           ||||||||||||||||||||
Sbjct: 570 tgcaccgcgccatgatggcg 589
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>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13
          Length = 348247

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 373    ttgtccaccggcgaccggccgacg 396
              |||||||||||||||| |||||||
Sbjct: 112161 ttgtccaccggcgaccagccgacg 112138
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>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
            9/14
          Length = 306550

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 373  ttgtccaccggcgaccggccgacg 396
            |||||||||||||||| |||||||
Sbjct: 4954 ttgtccaccggcgaccagccgacg 4931
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>gb|BC066799.1| Mus musculus cryptochrome 2 (photolyase-like), mRNA (cDNA clone
           MGC:76472 IMAGE:30103169), complete cds
          Length = 3970

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 520 aggccctcatcagccgcatggagc 543
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>dbj|AK133781.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730412K01 product:cryptochrome
           2 (photolyase-like), full insert sequence
          Length = 3984

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 536 aggccctcatcagccgcatggagc 559
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>dbj|AK041696.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630030K06 product:cryptochrome 2
           (photolyase-like), full insert sequence
          Length = 2162

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 529 aggccctcatcagccgcatggagc 552
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>dbj|AK053012.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930015M05 product:unclassifiable, full
           insert sequence
          Length = 1191

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 926 aggccctcatcagccgcatggagc 903
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>dbj|AK172994.1| Mus musculus mRNA for mKIAA0658 protein
          Length = 3930

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 493 aggccctcatcagccgcatggagc 516
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 151    aagtcacgcaagatcgagaccctc 174
              ||||||||||||||||| ||||||
Sbjct: 681458 aagtcacgcaagatcgacaccctc 681435
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>gb|AF156987.1|AF156987 Mus musculus cryptochrome 2 (Cry2) mRNA, complete cds
          Length = 1793

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 529 aggccctcatcagccgcatggagc 552
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 374     tgtccaccggcgaccggccg 393
               ||||||||||||||||||||
Sbjct: 3378111 tgtccaccggcgaccggccg 3378130
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>emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on chromosome 2, complete
              sequence
          Length = 211034

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 125    aggccctcatcagccgcatcgagc 148
              ||||||||||||||||||| ||||
Sbjct: 204790 aggccctcatcagccgcatggagc 204767
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>dbj|AB003433.1| Mus musculus mRNA for photolyase/blue-light receptor homolog2,
           partial cds
          Length = 1710

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 aggccctcatcagccgcatcgagc 148
           ||||||||||||||||||| ||||
Sbjct: 446 aggccctcatcagccgcatggagc 469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,836,855
Number of Sequences: 3902068
Number of extensions: 2836855
Number of successful extensions: 54902
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54618
Number of HSP's gapped (non-prelim): 284
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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