ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3e15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1055 bits (532), Expect = 0.0 Identities = 535/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119863 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119804 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119803 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119744 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119743 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 119684 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119683 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 119624 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119623 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 119564 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119563 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 119504 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119503 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 119444 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119443 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 119384 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119383 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119328 Score = 1055 bits (532), Expect = 0.0 Identities = 535/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95031 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95090 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95091 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95150 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95151 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 95210 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95211 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95270 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95271 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 95330 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95331 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 95390 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95391 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 95450 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95451 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 95510 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95511 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95566
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118644 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 118585 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118584 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 118525 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 118524 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 118465 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118464 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 118405 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118404 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 118345 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118344 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 118285 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118284 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 118225 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 118224 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 118165 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118164 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 118109
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119728 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119669 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119668 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119609 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119608 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 119549 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119548 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 119489 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119488 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 119429 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119428 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 119369 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119368 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 119309 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 119308 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 119249 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119248 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95428 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95487 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95488 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95547 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95548 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 95607 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95608 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95667 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95668 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 95727 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95728 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 95787 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95788 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 95847 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 95848 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 95907 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95908 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119728 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119669 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119668 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119609 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119608 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 119549 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119548 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 119489 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119488 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 119429 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119428 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 119369 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119368 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 119309 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 119308 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 119249 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119248 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95428 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95487 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95488 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95547 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95548 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 95607 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95608 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95667 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95668 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 95727 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95728 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 95787 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95788 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 95847 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 95848 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 95907 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95908 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119677 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119618 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119617 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119558 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119557 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 119498 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119497 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 119438 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119437 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 119378 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119377 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 119318 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119317 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 119258 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 119257 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 119198 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119197 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119142 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95373 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95432 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95433 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95492 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95493 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 95552 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95553 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95612 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95613 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 95672 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95673 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 95732 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95733 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 95792 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 95793 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 95852 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95853 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95908
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508006 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 31508065 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508066 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 31508125 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 31508126 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 31508185 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508186 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 31508245 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508246 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 31508305 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508306 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 31508365 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508366 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 31508425 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 31508426 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 31508485 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508486 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 31508541
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84590 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 84531 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84530 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 84471 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 84470 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 84411 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84410 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 84351 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84350 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 84291 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84290 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 84231 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84230 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 84171 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 84170 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 84111 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84110 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 84055
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119697 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119638 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119637 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119578 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119577 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 119518 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119517 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 119458 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119457 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 119398 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119397 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 119338 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119337 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 119278 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 119277 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 119218 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119217 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119162 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95421 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95480 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95481 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95540 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95541 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 95600 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95601 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95660 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95661 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 95720 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95721 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 95780 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95781 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 95840 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 95841 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 95900 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95901 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95956
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58416 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 58357 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58356 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 58297 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 58296 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 58237 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58236 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 58177 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58176 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 58117 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58116 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 58057 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58056 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 57997 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 57996 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 57937 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57936 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 57881
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268355 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 9268414 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268415 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 9268474 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9268475 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 9268534 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268535 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 9268594 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268595 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 9268654 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268655 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 9268714 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268715 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 9268774 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9268775 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 9268834 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268835 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 9268890 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227855 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 9227914 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227915 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 9227974 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9227975 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 9228034 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228035 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 9228094 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228095 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 9228154 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228155 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 9228214 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 9228274 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9228275 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 9228334 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228335 ggacccgaacctaggtgatctatccatgaccaggatgaagcttggatgaaactaag 9228390 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056269 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 9056328 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056329 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 9056388 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9056389 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 9056448 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9056449 catggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 9056508 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056509 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 9056568 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056569 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 9056628 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056629 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 9056688 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9056689 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 9056748 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056749 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 9056804 Score = 1023 bits (516), Expect = 0.0 Identities = 532/536 (99%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164444 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 9164503 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164504 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 9164563 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9164564 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 9164623 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164624 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 9164683 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164684 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 9164743 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164744 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 9164803 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164804 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 9164863 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9164864 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 9164923 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164924 ggacccgaa-ctaggtgatctatccatgaccaggatgaagcttggatgaaactaag 9164978 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 244 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 303 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 304 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938340 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 19938399 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938400 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 19938459 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19938460 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 19938519 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938520 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 19938579 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938580 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 19938639 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938640 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 19938699 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938700 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 19938759 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 19938760 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 19938819 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938820 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 19938875 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277091 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 10277032 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277031 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 10276972 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10276971 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 10276912 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276911 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 10276852 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276851 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 10276792 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276791 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 10276732 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276731 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 10276672 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10276671 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 10276612 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276611 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10276556 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387207 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 10387266 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387267 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 10387326 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10387327 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 10387386 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 10387446 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10387447 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggt 10387506 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387507 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 10387566 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387567 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 10387626 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10387627 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 10387686 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387687 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10387742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 262 agtaccgtgagggaaaggtgaaaagaacccc 292 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 87 ttgtgctgctaggcgaagcggttgagtgc 115 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598522 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 31598581 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598582 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 31598641 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 31598642 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 31598701 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598702 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 31598761 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598762 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 31598821 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598822 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 31598881 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598882 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 31598941 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 31598942 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 31599001 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599002 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 31599057
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525838 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 33525897 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525898 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 33525957 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 33525958 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 33526017 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526018 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 33526077 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526078 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 33526137 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526138 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 33526197 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526198 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 33526257 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33526258 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 33526317 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526318 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 33526373 Score = 333 bits (168), Expect = 3e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 266 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 325 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 326 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 385 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 386 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 280 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 339 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 340 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 389 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 273 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 311 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47703 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 47644 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47643 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 47584 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 47583 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 47524 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47523 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 47464 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47463 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 47404 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47403 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 47344 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47343 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 47284 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 47283 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 47224 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47223 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 47168
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71035 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 71094 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71095 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 71154 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 71155 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 71214 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71215 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 71274 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71275 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 71334 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71335 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 71394 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71395 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 71454 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 71455 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 71514 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71515 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 71570 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 266 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 326 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 327 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 386 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 446 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 506 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 566 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 626 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 627 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 686 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 742
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 61 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 121 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 181 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 241 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 301 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 361 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 421 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 422 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 481 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 173 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 233 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 234 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 293 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 353 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 413 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 473 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 533 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 534 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 593 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 649
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 483 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 539
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 61 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 121 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 181 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 241 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 301 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 361 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 421 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 422 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 481 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 483 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 539
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949616 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 19949675 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949676 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 19949735 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19949736 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 19949795 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949796 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 19949855 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949856 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 19949915 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949916 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 19949975 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949976 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 19950035 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 19950036 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 19950095 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950096 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 19950151 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283130 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 10283071 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283070 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 10283011 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10283010 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 10282951 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282950 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 10282891 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282890 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 10282831 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282830 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 10282771 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282770 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 10282711 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10282710 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 10282651 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282650 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10282595 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393246 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 10393305 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393306 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 10393365 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10393366 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 10393425 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393426 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 10393485 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10393486 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggt 10393545 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393546 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 10393605 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393606 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 10393665 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10393666 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 10393725 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393726 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10393781 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 87 ttgtgctgctaggcgaagcggttgagtgc 115 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119671 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 119612 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119611 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 119552 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119551 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 119492 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119491 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 119432 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119431 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 119372 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119371 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 119312 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119311 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 119252 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 119251 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 119192 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119191 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119136 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95368 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 95427 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95428 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 95487 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95488 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 95547 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95548 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95607 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95608 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 95667 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95668 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 95727 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95728 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 95787 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 95788 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 95847 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95848 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95903
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1043 bits (526), Expect = 0.0 Identities = 532/534 (99%) Strand = Plus / Plus Query: 3 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 63 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 123 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 182 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 183 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 243 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 303 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 363 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 423 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 482 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 480 Query: 483 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 534
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 715 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 655 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 654 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 595 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 535 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 475 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 415 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 355 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 354 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 295 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 239
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14195 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 14254 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14255 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 14314 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14315 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 14374 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14375 catggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 14434 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14435 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 14494 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14495 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 14554 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14555 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 14614 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 14615 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 14674 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14675 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 14730 Score = 1023 bits (516), Expect = 0.0 Identities = 532/536 (99%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122470 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 122529 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122530 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 122589 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122590 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 122649 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122650 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 122709 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122710 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 122769 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122770 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 122829 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122830 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 122889 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122890 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 122949 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122950 ggacccgaa-ctaggtgatctatccatgaccaggatgaagcttggatgaaactaag 123004
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141003 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 141062 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141063 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 141122 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 141123 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 141182 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141183 catggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 141242 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141243 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 141302 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141303 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 141362 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141363 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 141422 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141423 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 141482 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141483 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 141538
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93599 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 93658 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93659 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 93718 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 93719 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 93778 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93779 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 93838 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93839 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggt 93898 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93899 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 93958 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93959 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 94018 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 94019 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 94078 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94079 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 94134
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20430 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 20489 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20490 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 20549 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 20550 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 20609 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20610 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 20669 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20670 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 20729 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20730 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 20789 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20790 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 20849 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 20850 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 20909 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20910 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 20965 Score = 1023 bits (516), Expect = 0.0 Identities = 531/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44688 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 44629 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44628 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 44569 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 44568 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 44509 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44508 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 44449 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44448 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 44389 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44388 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 44329 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44328 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 44269 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 44268 atggaaccctccggagccgtagtgaaagcgagtcttcatagggcgattgtcactgcttat 44209 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44208 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 44153
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1258 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 1198 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1197 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 1138 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 1078 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 1018 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 958 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 898 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 897 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 838 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 782
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27663 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 27722 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27723 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 27782 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 27783 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 27842 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27843 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 27902 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27903 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggt 27962 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27963 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 28022 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28023 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 28082 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 28083 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 28142 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28143 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 28198
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123527 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 123468 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123467 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123408 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 123407 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 123348 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123347 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 123288 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123287 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 123228 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123227 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 123168 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123167 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 123108 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 123107 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 123048 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123047 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122992 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99310 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 99369 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99370 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 99429 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99430 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 99489 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99490 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 99549 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99550 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 99609 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99610 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 99669 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99670 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 99729 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 99730 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 99789 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99790 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 99845
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1039 bits (524), Expect = 0.0 Identities = 530/532 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 480 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 532 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 532
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124244 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 124185 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124184 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 124125 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 124065 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124064 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 124005 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124004 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 123945 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123944 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 123885 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123884 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 123825 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 123824 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 123765 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123764 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 123709 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99987 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 100046 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100047 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 100106 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 100107 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 100166 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100167 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 100226 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100227 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 100286 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100287 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 100346 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100347 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100406 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 100407 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 100466 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100467 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 100522
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1031 bits (520), Expect = 0.0 Identities = 532/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9241926 agcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaac 9241867 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241866 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 9241807 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9241806 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 9241747 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241746 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 9241687 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241686 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 9241627 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241626 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 9241567 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9241566 tgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaaggga 9241507 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9241506 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 9241447 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241446 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 9241391
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1031 bits (520), Expect = 0.0 Identities = 532/536 (99%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 53139 agcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaac 53080 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53079 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 53020 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 53019 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 52960 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52959 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 52900 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52899 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 52840 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52839 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 52780 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 52779 tgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaaggga 52720 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 52719 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 52660 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52659 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 52604
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1005 bits (507), Expect = 0.0 Identities = 516/519 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 169 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 229 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 230 cctagatggctaaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtag 289 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 349 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 409 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 469 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 529 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 530 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 589 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaa 519 ||||||||||||||||||||||||||||||||||||||| Sbjct: 590 ggacccgaacctgggtgatctatccatgaccaggatgaa 628
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123466 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 123407 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123406 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123347 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 123346 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 123288 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123287 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 123228 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123227 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 123168 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123167 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 123108 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123107 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 123048 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 123047 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 122988 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122987 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122932 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99271 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 99330 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99331 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 99390 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 99391 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 99449 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99450 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 99509 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99510 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 99569 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99570 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 99629 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99630 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 99689 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 99690 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 99749 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99750 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 99805
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 5683 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5684 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 5743 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 5744 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 5802 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5803 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 5862 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5863 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 5922 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5923 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 5982 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5983 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 6042 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6043 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 6102 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6103 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 6158
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 271 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 ggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 331 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| Sbjct: 332 cctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtag 390 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 450 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 510 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 570 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 630 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 631 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 690 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 746
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 924 bits (466), Expect = 0.0 Identities = 511/527 (96%), Gaps = 13/527 (2%) Strand = Plus / Minus Query: 15 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 75 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 135 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 194 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 195 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 249 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 250 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 310 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 369 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 370 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 75007 Query: 490 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75006 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 74960 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 924 bits (466), Expect = 0.0 Identities = 511/527 (96%), Gaps = 13/527 (2%) Strand = Plus / Plus Query: 15 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 75 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 135 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 194 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 195 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 249 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 250 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 310 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 369 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 370 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 382531 Query: 490 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382532 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 382578 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 924 bits (466), Expect = 0.0 Identities = 511/527 (96%), Gaps = 13/527 (2%) Strand = Plus / Minus Query: 15 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 75 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 135 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 194 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 195 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 249 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 250 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 310 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 369 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 370 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 113098 Query: 490 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113097 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 113051 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 924 bits (466), Expect = 0.0 Identities = 511/527 (96%), Gaps = 13/527 (2%) Strand = Plus / Minus Query: 15 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 75 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 135 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 194 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 195 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 249 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 250 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 310 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 369 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 370 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 367780 Query: 490 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367779 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 367733 Score = 924 bits (466), Expect = 0.0 Identities = 511/527 (96%), Gaps = 13/527 (2%) Strand = Plus / Minus Query: 15 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 75 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 135 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 194 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 195 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 249 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 250 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 310 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 369 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 370 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 184385 Query: 490 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184384 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 184338 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 292 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 860 bits (434), Expect = 0.0 Identities = 511/536 (95%), Gaps = 8/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134015 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 133956 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 133955 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcac 133896 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 133895 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 133836 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133835 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 133776 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133775 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 133716 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 133715 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctc 133659 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133658 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 133602 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 133601 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 133544 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133543 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 133488 Score = 860 bits (434), Expect = 0.0 Identities = 511/536 (95%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103956 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104015 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104016 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcac 104075 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104076 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 104135 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104136 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104195 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104196 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 104255 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 104256 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctc 104312 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104313 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 104369 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104370 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 104427 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104428 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104483
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 844 bits (426), Expect = 0.0 Identities = 509/536 (94%), Gaps = 8/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139378 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139319 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||| Sbjct: 139318 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcac 139259 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 139258 cctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtag 139199 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139198 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139139 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139138 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 139079 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 139078 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 139022 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139021 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 138965 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 138964 --ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttat 138907 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138906 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138851 Score = 844 bits (426), Expect = 0.0 Identities = 509/536 (94%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110567 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 110626 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||| Sbjct: 110627 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcac 110686 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 110687 cctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtag 110746 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110747 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110806 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110807 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 110866 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 110867 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 110923 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110924 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 110980 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 110981 --ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttat 111038 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111039 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 111094
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 844 bits (426), Expect = 0.0 Identities = 509/536 (94%), Gaps = 8/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141900 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 141841 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| Sbjct: 141840 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcac 141781 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 141780 cctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtag 141721 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141720 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 141661 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141660 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 141601 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 141600 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 141544 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141543 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 141487 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 141486 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 141429 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141428 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 141373 Score = 844 bits (426), Expect = 0.0 Identities = 509/536 (94%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111757 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 111816 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| Sbjct: 111817 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcac 111876 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 111877 cctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtag 111936 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 111937 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 111996 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111997 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 112056 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 112057 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctc 112113 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112114 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 112170 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 112171 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 112228 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112229 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 112284
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 844 bits (426), Expect = 0.0 Identities = 509/536 (94%), Gaps = 8/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127656 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 127597 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| Sbjct: 127596 ggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcac 127537 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 127536 cctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtag 127477 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127476 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 127417 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127416 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 127357 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||| Sbjct: 127356 agtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctc 127300 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127299 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 127240 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 127239 at-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 127185 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127184 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 127129 Score = 844 bits (426), Expect = 0.0 Identities = 509/536 (94%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107266 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 107325 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| Sbjct: 107326 ggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcac 107385 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 107386 cctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtag 107445 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107446 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 107505 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107506 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 107565 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||| Sbjct: 107566 agtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctc 107622 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107623 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 107682 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107683 at-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 107737 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107738 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107793
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 835 bits (421), Expect = 0.0 Identities = 508/536 (94%), Gaps = 12/536 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134773 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 134714 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 134713 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 134654 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||| Sbjct: 134653 cctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtag 134594 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134593 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 134534 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134533 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 134474 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 134473 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctc 134421 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134420 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 134364 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 134363 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 134306 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134305 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134250 Score = 835 bits (421), Expect = 0.0 Identities = 508/536 (94%), Gaps = 12/536 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105509 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105568 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 105569 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 105628 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||| Sbjct: 105629 cctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtag 105688 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105689 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105748 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105749 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 105808 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 105809 agtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctc 105861 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 105918 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 105919 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 105976 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105977 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106032
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 263 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 323 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 324 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 383 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 443 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 503 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 563 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 623 Query: 421 acg 423 ||| Sbjct: 624 acg 626
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 823 bits (415), Expect = 0.0 Identities = 507/536 (94%), Gaps = 10/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136383 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136324 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 136323 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 136264 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 136263 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 136204 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136203 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 136144 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136143 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 136084 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 136083 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 136029 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136028 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 135972 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 135971 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 135914 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135913 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135858 Score = 823 bits (415), Expect = 0.0 Identities = 507/536 (94%), Gaps = 10/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106042 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106101 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 106102 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 106161 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106162 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106221 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106222 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106281 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106282 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106341 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | || | ||| Sbjct: 106342 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctc 106396 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 106453 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 106454 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 106511 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106512 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106567
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 813 bits (410), Expect = 0.0 Identities = 506/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132567 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132508 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 132507 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 132448 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132447 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 132388 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 132328 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132327 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 132268 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 132267 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 132212 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132211 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 132155 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 132154 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 132097 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132096 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132041 Score = 813 bits (410), Expect = 0.0 Identities = 506/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104311 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104370 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104371 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 104430 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104431 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 104490 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104491 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104550 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104551 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 104610 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 104611 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 104666 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104667 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 104723 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 104724 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 104781 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104782 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104837
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 813 bits (410), Expect = 0.0 Identities = 506/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132790 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132731 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 132730 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 132671 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132670 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 132611 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132610 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 132551 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132550 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 132491 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 132490 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 132435 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132434 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 132378 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 132377 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 132320 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132319 ggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 132264 Score = 813 bits (410), Expect = 0.0 Identities = 506/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103974 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104033 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 104034 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 104093 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104094 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 104153 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104154 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104213 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104214 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 104273 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 104274 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 104329 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104330 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 104386 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 104387 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 104444 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104445 ggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 104500
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 813 bits (410), Expect = 0.0 Identities = 419/422 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 223 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 ggggttgtgggagagcagtacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 283 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 284 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 343 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 403 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 463 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 464 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaattgatctc 523 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 583 Query: 421 ac 422 || Sbjct: 584 ac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 813 bits (410), Expect = 0.0 Identities = 413/414 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 196 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 197 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 256 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 316 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 376 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 436 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 490
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 813 bits (410), Expect = 0.0 Identities = 506/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132560 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 132501 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 132500 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 132441 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132440 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 132381 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132380 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 132321 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 132320 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 132261 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 132260 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 132205 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132204 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 132148 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 132147 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 132090 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132089 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132034 Score = 813 bits (410), Expect = 0.0 Identities = 506/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104309 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104368 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 104369 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 104428 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104429 cctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 104488 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104489 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 104548 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 104549 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 104608 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 104609 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 104664 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104665 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 104721 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 104722 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 104779 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104780 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104835
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 805 bits (406), Expect = 0.0 Identities = 505/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131459 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131400 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 131399 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 131340 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131339 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 131280 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131279 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 131220 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 131219 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 131160 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 131159 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 131104 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131103 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 131047 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 131046 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 130989 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130988 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 130933 Score = 805 bits (406), Expect = 0.0 Identities = 505/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103176 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 103235 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 103236 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 103295 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 103296 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 103355 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103356 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 103415 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 103416 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 103475 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 103476 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 103531 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103532 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 103588 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 103589 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 103646 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103647 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 103702
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 805 bits (406), Expect = 0.0 Identities = 505/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133751 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 133692 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 133691 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 133632 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133631 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 133572 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133571 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 133512 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 133511 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 133452 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 133451 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 133396 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133395 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 133339 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 133338 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 133281 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133280 ggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 133225 Score = 805 bits (406), Expect = 0.0 Identities = 505/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104898 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 104957 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 104958 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 105017 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105018 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 105077 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105078 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 105137 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105138 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 105197 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 105198 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 105253 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105254 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 105310 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 105311 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 105368 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105369 ggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 105424
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 803 bits (405), Expect = 0.0 Identities = 504/535 (94%), Gaps = 9/535 (1%) Strand = Plus / Minus Query: 2 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 476 Query: 62 gggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 121 ||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||||| Sbjct: 475 gggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcacc 416 Query: 122 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 181 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 415 ctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagc 356 Query: 182 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 296 Query: 242 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct: 295 tgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggga 236 Query: 302 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 361 |||||||||||| |||||||| | |||||||||||||||||||| | | | |||| Sbjct: 235 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctct 180 Query: 362 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag---- 124 Query: 422 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 481 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 123 -ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatg 65 Query: 482 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 64 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 10
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136092 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136033 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 136032 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135973 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135972 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 135913 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135912 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135853 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135852 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135793 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135792 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135738 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 135680 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 135679 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 135623 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135566 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106538 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106597 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106598 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106657 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106658 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 106717 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106718 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106777 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106778 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106837 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106838 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106892 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106893 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106950 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106951 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 107007 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107008 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107064
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136730 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136671 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 136670 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 136611 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 136610 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 136551 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136550 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 136491 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 136490 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 136431 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 136430 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 136376 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136375 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 136318 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 136317 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 136261 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136260 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 136204 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106827 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106886 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 106887 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 106946 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106947 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 107006 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107007 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 107066 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 107067 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 107126 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 107127 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 107181 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107182 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 107239 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 107240 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 107296 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107297 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107353
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1732 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1791 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 1792 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 1851 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1852 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 1911 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1912 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 1971 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1972 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 2031 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 2032 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 2086 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2087 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 2144 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 2145 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 2201 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2202 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2258
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135338 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135279 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135278 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135219 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135218 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135159 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135158 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135099 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135098 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135039 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135038 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 134984 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134983 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 134926 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 134925 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 134869 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134868 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134812 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105698 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105757 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105758 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105817 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105818 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 105877 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105878 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105937 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105938 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 105997 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 105998 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106052 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106053 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106110 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106111 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 106167 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106168 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106224
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135414 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135413 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135354 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135353 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135294 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135234 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135233 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135174 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135173 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135119 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 135061 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 135060 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 135004 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134947 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105870 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105929 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105930 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105989 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105990 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 106049 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106050 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106109 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106110 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106169 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106170 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106224 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106225 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106282 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106283 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 106339 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106340 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106396
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135471 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135412 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135411 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135352 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135351 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135292 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135291 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135232 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135231 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135172 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135171 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135117 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135116 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 135059 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 135058 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 135002 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135001 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134945 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105867 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105926 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105927 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105986 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105987 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 106046 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106047 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106106 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106107 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106166 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106167 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106221 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106222 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106279 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106280 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 106336 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106337 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106393
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135383 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135324 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135323 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135264 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135263 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135204 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135203 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135144 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135143 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135084 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135083 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135029 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135028 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 134971 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 134970 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 134914 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134913 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134857 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105745 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105804 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105805 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105864 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105865 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 105924 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105925 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105984 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105985 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106044 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106045 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106099 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106100 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106157 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106158 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 106214 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106215 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106271
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136090 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 136031 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 136030 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135971 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135970 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 135911 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135910 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135851 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135850 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135791 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135790 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135736 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135735 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 135678 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 135677 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 135621 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135620 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135564 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106536 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106595 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106596 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106655 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106656 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 106715 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106716 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106775 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106776 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106835 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106836 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106890 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106948 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106949 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 107005 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107062
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135821 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135762 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 135761 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 135702 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135701 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 135642 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135641 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135582 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135581 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135522 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135521 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 135467 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 135409 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 135408 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 135352 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135351 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135295 Score = 801 bits (404), Expect = 0.0 Identities = 506/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106317 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106376 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 106377 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 106436 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106437 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 106496 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106497 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106556 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106557 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106616 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106617 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106671 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106672 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106729 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106730 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 106786 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106787 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106843
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 797 bits (402), Expect = 0.0 Identities = 504/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140152 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 140093 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||| Sbjct: 140092 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcac 140033 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 140032 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 139973 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139972 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139913 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 139912 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 139853 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | || ||||||||||||||||| | | | | ||| Sbjct: 139852 agtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctc 139797 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139796 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 139740 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 139739 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 139682 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139681 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 139626 Score = 797 bits (402), Expect = 0.0 Identities = 504/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109908 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109967 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||| Sbjct: 109968 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcac 110027 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110028 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 110087 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110088 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110147 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110148 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 110207 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | || ||||||||||||||||| | | | | ||| Sbjct: 110208 agtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctc 110263 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110264 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 110320 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 110321 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 110378 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110379 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110434
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 797 bits (402), Expect = 0.0 Identities = 504/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131583 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131524 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 131523 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaac 131464 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131463 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 131404 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131403 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 131344 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 131343 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 131284 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | ||||| |||||||||||||||| | || | | Sbjct: 131283 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccc 131228 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131227 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 131171 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 131170 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 131113 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131112 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 131057 Score = 797 bits (402), Expect = 0.0 Identities = 504/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101862 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 101921 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 101922 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaac 101981 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101982 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 102041 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102042 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 102101 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 102102 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 102161 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | ||||| |||||||||||||||| | || | | Sbjct: 102162 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccc 102217 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102218 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 102274 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 102275 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 102332 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102333 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 102388
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 797 bits (402), Expect = 0.0 Identities = 504/536 (94%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 266 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| Sbjct: 267 ggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 326 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 327 cctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagtag 386 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 446 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 447 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 506 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | || ||| Sbjct: 507 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctc 562 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 619 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 620 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 677 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 678 ggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 733
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 793 bits (400), Expect = 0.0 Identities = 406/408 (99%) Strand = Plus / Plus Query: 129 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 188 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 189 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 249 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 309 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 369 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 429 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 488 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 360 Query: 489 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 408
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 793 bits (400), Expect = 0.0 Identities = 505/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135350 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135291 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 135290 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 135231 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135230 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135171 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135170 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135111 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135110 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135051 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 135050 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 134996 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134995 ctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag-- 134938 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 134937 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 134881 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134880 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134824 Score = 793 bits (400), Expect = 0.0 Identities = 505/537 (94%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105712 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 105771 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 105772 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 105831 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105832 ccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 105891 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105892 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 105951 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 105952 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106011 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 106012 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 106066 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106067 ctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag-- 106124 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 106125 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 106181 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106182 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106238
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 791 bits (399), Expect = 0.0 Identities = 505/537 (94%), Gaps = 10/537 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaa 59 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaa 267 Query: 60 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 119 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 268 cggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaa 327 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 328 ccctagatggctagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 387 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 447 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 448 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggg 507 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | | | || Sbjct: 508 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-gggct 563 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 621 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 622 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 678 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 679 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 789 bits (398), Expect = 0.0 Identities = 503/536 (93%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctc 571 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 628 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 629 --ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttat 686 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 687 ggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaag 742
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 785 bits (396), Expect = 0.0 Identities = 504/537 (93%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139296 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139237 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 139236 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 139177 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139176 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 139117 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139116 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 139057 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 139056 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggg 138997 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 138996 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ct 138942 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138941 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 138884 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 138883 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 138827 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138826 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138770 Score = 785 bits (396), Expect = 0.0 Identities = 504/537 (93%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109801 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109860 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 109861 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 109920 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 109921 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 109980 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109981 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 110040 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 110041 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggg 110100 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 110101 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ct 110155 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110156 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 110213 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 110214 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 110270 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110271 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110327
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 781 bits (394), Expect = 0.0 Identities = 502/536 (93%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106272 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106273 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106332 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106333 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106392 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106393 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106452 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106453 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106512 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106513 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 106568 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 106625 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 106626 --ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttat 106683 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106684 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106739 Score = 731 bits (369), Expect = 0.0 Identities = 501/539 (92%), Gaps = 12/539 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135696 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135637 Query: 61 ggggttgtgggagagcaa-tacaagcgttgtgctgctaggcgaagcggttgagtgccgca 119 |||||||||||||||||| ||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 135636 ggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgca 135577 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc-tgacccgagt 178 ||||||||||| | |||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 135576 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagt 135517 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagc-aaggaccaccttgcaaggctaaata 237 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135516 agcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaata 135457 Query: 238 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 297 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 135456 ctcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135397 Query: 298 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 357 || ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 135396 gggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgagga 135341 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||||||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 -----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135167
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 781 bits (394), Expect = 0.0 Identities = 502/536 (93%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135972 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135913 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 135912 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 135853 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135852 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135793 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135792 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135733 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135732 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135673 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 135672 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 135617 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 135560 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 135559 --ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttat 135502 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135501 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135446 Score = 781 bits (394), Expect = 0.0 Identities = 502/536 (93%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106435 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106494 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106495 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106554 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106555 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106614 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106615 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106674 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106675 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106734 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106735 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 106790 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106791 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 106847 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| Sbjct: 106848 --ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttat 106905 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106906 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106961
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 777 bits (392), Expect = 0.0 Identities = 504/537 (93%), Gaps = 12/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 242 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||| Sbjct: 243 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgca 302 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 303 ccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 361 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 421 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 422 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 481 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 482 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 536 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 594 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 595 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 651 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 652 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 708
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 771 bits (389), Expect = 0.0 Identities = 502/537 (93%), Gaps = 12/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 763 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 764 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 823 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 824 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 883 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 943 Query: 241 ctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtggg 299 |||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 944 ctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggg 1003 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | ||||| |||||||||||||| || || || Sbjct: 1004 gagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacag---gct 1057 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 1115 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1116 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 1172 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1173 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 1229
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 769 bits (388), Expect = 0.0 Identities = 502/537 (93%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142671 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 142612 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgca 119 ||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| ||| Sbjct: 142611 ggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgca 142552 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 142551 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 142492 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 142491 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 142432 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 142431 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 142372 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | ||||||||||||||||||| | || | || Sbjct: 142371 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ct 142317 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142316 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 142259 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 142258 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 142202 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142201 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 142145 Score = 769 bits (388), Expect = 0.0 Identities = 502/537 (93%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110657 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 110716 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgca 119 ||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| ||| Sbjct: 110717 ggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgca 110776 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110777 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 110836 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110837 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 110896 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110897 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 110956 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | ||||||||||||||||||| | || | || Sbjct: 110957 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ct 111011 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111012 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 111069 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 111070 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 111126 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111127 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 111183
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 765 bits (386), Expect = 0.0 Identities = 498/531 (93%), Gaps = 12/531 (2%) Strand = Plus / Plus Query: 8 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1982 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 2041 Query: 68 tgggagagcaatacaagcgtt-gtgctgctaggcgaagcggtt-gagtgccgcaccctag 125 ||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 2042 tgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccctag 2101 Query: 126 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 185 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2102 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 2161 Query: 186 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2162 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 2221 Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 305 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 2222 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 2281 Query: 306 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 365 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 2282 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 2336 Query: 366 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 425 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2337 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 2391 Query: 426 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 485 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2392 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 2451 Query: 486 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2452 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2502
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 765 bits (386), Expect = 0.0 Identities = 503/539 (93%), Gaps = 11/539 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139505 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 139446 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||| Sbjct: 139445 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgca 139386 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139385 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 139326 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139325 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 139266 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 139265 cctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 139206 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgat 357 ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 139205 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactagga 139149 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138975 Score = 765 bits (386), Expect = 0.0 Identities = 503/539 (93%), Gaps = 11/539 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109794 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 109853 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| ||| Sbjct: 109854 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgca 109913 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 109914 ccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 109973 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109974 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 110033 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 110034 cctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 110093 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgat 357 ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 110094 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactagga 110150 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110324
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 755 bits (381), Expect = 0.0 Identities = 500/538 (92%), Gaps = 10/538 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88556 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 88615 Query: 61 ggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgc 118 ||||||||||||||||| ||| |||| |||||||||||||||||||||||||| | || Sbjct: 88616 ggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgc 88675 Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 178 ||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||||||| Sbjct: 88676 accctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagt 88735 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88736 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 88795 Query: 239 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 88796 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 88855 Query: 299 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 358 | ||||||||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 88856 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatc 88912 Query: 359 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 88913 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaag- 88971 Query: 419 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 478 ||||||||||||||||||||||| |||||||||| || |||| ||||||||||||| Sbjct: 88972 ----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgctt 89027 Query: 479 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 89028 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 89085
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 753 bits (380), Expect = 0.0 Identities = 498/536 (92%), Gaps = 11/536 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||| ||| |||||||| | ||||| |||||||||||||| || || ||| Sbjct: 516 agtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctc 569 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 570 tgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag--- 626 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 627 --ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 684 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 685 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 740
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 749 bits (378), Expect = 0.0 Identities = 497/536 (92%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 209 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 268 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||| Sbjct: 269 ggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcac 328 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | |||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 329 cccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtag 388 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 448 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 449 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 508 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 509 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctc 565 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 566 tgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag--- 622 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 || ||||||||||||||||||||||||||||||| | |||| ||||||||| ||||| Sbjct: 623 --gggacccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttat 680 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 681 ggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaag 736
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 747 bits (377), Expect = 0.0 Identities = 499/538 (92%), Gaps = 10/538 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86470 agcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaac 86529 Query: 61 ggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 118 |||||||||||||||| |||| |||| |||||||||||||||||||||||||| | || Sbjct: 86530 ggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgc 86589 Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 178 ||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||||||| Sbjct: 86590 accctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagt 86649 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86650 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 86709 Query: 239 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86710 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 86769 Query: 299 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 358 | ||||||||||||| |||||||| | |||||||||||||||||||| || |||| Sbjct: 86770 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatc 86826 Query: 359 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86827 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaag- 86885 Query: 419 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 478 ||||||||||||||||||||||| |||||||||| || |||| ||||||||||||| Sbjct: 86886 ----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgctt 86941 Query: 479 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86942 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 86999
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 743 bits (375), Expect = 0.0 Identities = 497/536 (92%), Gaps = 10/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4439 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 4498 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||| ||||||||||||| | || || |||| Sbjct: 4499 ggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcac 4558 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4559 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 4618 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4619 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4678 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 4679 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggg 4738 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 4739 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctc 4793 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4794 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 4850 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 4851 --ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttat 4908 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4909 ggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 4964
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 743 bits (375), Expect = 0.0 Identities = 497/536 (92%), Gaps = 10/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 23486 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 23427 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||| ||||||||||||| | || || |||| Sbjct: 23426 ggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcac 23367 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23366 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 23307 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23306 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 23247 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 23246 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgggg 23187 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct: 23186 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctc 23132 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23131 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 23075 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 23074 --ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttat 23017 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23016 ggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 22961
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 741 bits (374), Expect = 0.0 Identities = 501/539 (92%), Gaps = 12/539 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131662 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 131603 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 118 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 131602 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 131543 Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 178 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131542 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 131483 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131482 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 131423 Query: 239 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 298 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 131422 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 131363 Query: 299 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgat 357 | ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 131362 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga- 131307 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 -----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 131133 Score = 741 bits (374), Expect = 0.0 Identities = 501/539 (92%), Gaps = 12/539 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103732 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 103791 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 118 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 103792 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 103851 Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 178 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103852 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 103911 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103912 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 103971 Query: 239 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 298 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 103972 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 104031 Query: 299 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgat 357 | ||||||||||||| |||||||| | |||||||||||||||||||| || | || Sbjct: 104032 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga- 104087 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 -----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104261
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 741 bits (374), Expect = 0.0 Identities = 500/537 (93%), Gaps = 15/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 368 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgca 119 ||| ||||||||||||||||||||||| |||||||||||||||| || || ||| ||| Sbjct: 369 ggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgca 427 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 487 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 488 gcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatact 547 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 548 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggg 606 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | | || Sbjct: 607 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca----gggct 659 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 717 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 718 ---ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 774 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 775 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 831
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 735 bits (371), Expect = 0.0 Identities = 497/536 (92%), Gaps = 11/536 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4708 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 4767 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || || |||| Sbjct: 4768 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcac 4827 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4828 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaa 4887 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 catggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4947 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 4948 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggg 5007 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | ||||||||| |||||||||| | | | ||| Sbjct: 5008 agtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctc 5061 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5062 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 5118 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 5119 --ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttat 5176 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5177 ggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 735 bits (371), Expect = 0.0 Identities = 497/536 (92%), Gaps = 11/536 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4708 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 4767 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || || |||| Sbjct: 4768 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcac 4827 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4828 cctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaa 4887 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 catggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4947 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 4948 ctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgggg 5007 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | ||||||||| |||||||||| | | | ||| Sbjct: 5008 agtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctc 5061 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5062 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 5118 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 5119 --ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttat 5176 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5177 ggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 714 bits (360), Expect = 0.0 Identities = 495/537 (92%), Gaps = 11/537 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 52478 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 52419 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 119 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 52418 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 52359 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 52358 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagta 52299 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52298 gcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 52239 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 52238 cctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggg 52179 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 52178 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 52124 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52123 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-- 52066 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||| |||||||||||||| || ||||||| |||||||||||||| Sbjct: 52065 ---ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgctta 52009 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52008 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 51952 Score = 714 bits (360), Expect = 0.0 Identities = 495/537 (92%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37350 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 37409 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 119 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 37410 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 37469 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 37470 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagta 37529 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37530 gcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 37589 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 37590 cctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggg 37649 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 37650 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 37704 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37705 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-- 37762 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||| |||||||||||||| || ||||||| |||||||||||||| Sbjct: 37763 ---ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgctta 37819 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37820 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 37876
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 714 bits (360), Expect = 0.0 Identities = 495/537 (92%), Gaps = 11/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4278 agcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaac 4337 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgca 119 |||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||| Sbjct: 4338 ggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgca 4397 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 4398 ccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagta 4457 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4458 gcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 4517 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 4518 cctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggg 4577 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 4578 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 4632 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4633 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-- 4690 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||| |||||||||||||| || ||||||| |||||||||||||| Sbjct: 4691 ---ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgctta 4747 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4748 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 4804
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 708 bits (357), Expect = 0.0 Identities = 496/542 (91%), Gaps = 14/542 (2%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 128238 agcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaac 128179 Query: 61 ggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtg 114 ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 128178 ggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtc 128119 Query: 115 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 174 |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| |||| Sbjct: 128118 ccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaaccc 128059 Query: 175 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 234 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128058 aagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 127999 Query: 235 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 294 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 127998 atactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaaccccca 127939 Query: 295 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 354 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 127938 taggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattg 127882 Query: 355 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 414 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 127881 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 127822 Query: 415 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 474 ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 127821 aag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 127767 Query: 475 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 534 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 127766 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 127707 Query: 535 ag 536 || Sbjct: 127706 ag 127705 Score = 708 bits (357), Expect = 0.0 Identities = 496/542 (91%), Gaps = 14/542 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 95209 agcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaac 95268 Query: 61 ggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtg 114 ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 95269 ggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtc 95328 Query: 115 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 174 |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| |||| Sbjct: 95329 ccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaaccc 95388 Query: 175 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 234 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95389 aagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 95448 Query: 235 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 294 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 95449 atactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaaccccca 95508 Query: 295 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 354 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 95509 taggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattg 95565 Query: 355 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 414 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 95566 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 95625 Query: 415 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 474 ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 95626 aag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 95680 Query: 475 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 534 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 95681 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 95740 Query: 535 ag 536 || Sbjct: 95741 ag 95742
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 704 bits (355), Expect = 0.0 Identities = 493/537 (91%), Gaps = 9/537 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 146351 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 146292 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | || Sbjct: 146291 ggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtac 146232 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagctt-atgctctgacccgagta 179 ||||||||| | |||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct: 146231 cctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagta 146172 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 146171 gcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 146112 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 146111 cctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggg 146052 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | ||||||||||||||||||| ||| |||| Sbjct: 146051 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatcc 145995 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 145994 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-- 145937 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 145936 ---ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctta 145880 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145879 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 145823 Score = 704 bits (355), Expect = 0.0 Identities = 493/537 (91%), Gaps = 9/537 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112111 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 112170 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | || Sbjct: 112171 ggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtac 112230 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagctt-atgctctgacccgagta 179 ||||||||| | |||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct: 112231 cctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagta 112290 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 112291 gcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 112350 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 112351 cctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggg 112410 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | ||||||||||||||||||| ||| |||| Sbjct: 112411 gagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatcc 112467 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 112468 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-- 112525 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 112526 ---ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctta 112582 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112583 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 112639
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 702 bits (354), Expect = 0.0 Identities = 492/536 (91%), Gaps = 9/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 116001 agcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 115942 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||| Sbjct: 115941 ggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcac 115883 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||| Sbjct: 115882 cctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtag 115823 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 115822 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 115763 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 115762 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 115703 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 115702 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctc 115646 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 115645 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 115586 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | ||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 115585 gc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttat 115531 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115530 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 115475 Score = 702 bits (354), Expect = 0.0 Identities = 492/536 (91%), Gaps = 9/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86119 agcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 86178 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||| Sbjct: 86179 ggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcac 86237 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||| Sbjct: 86238 cctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtag 86297 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 86298 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 86357 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86358 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 86417 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 86418 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctc 86474 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 86475 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 86534 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | ||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 86535 gc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttat 86589 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86590 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 86645
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 702 bits (354), Expect = 0.0 Identities = 491/536 (91%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4098 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 4157 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 4158 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 4217 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 4218 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 4277 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4278 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 4337 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4338 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 4397 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 4398 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 4454 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 4455 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag--- 4511 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 4512 --ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttat 4569 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4570 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 4625
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 702 bits (354), Expect = 0.0 Identities = 491/536 (91%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 267 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 268 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 327 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 328 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 387 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 447 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 448 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 507 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 508 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 564 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 565 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag--- 621 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 622 --ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttat 679 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 680 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 702 bits (354), Expect = 0.0 Identities = 491/536 (91%), Gaps = 8/536 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 151037 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 150978 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 150977 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 150918 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 150917 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 150858 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150857 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 150798 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 150797 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 150738 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 150737 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 150681 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 150680 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag--- 150624 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 150623 --ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttat 150566 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150565 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 150510 Score = 702 bits (354), Expect = 0.0 Identities = 491/536 (91%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117629 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 117688 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 117689 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 117748 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 117749 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 117808 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117809 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 117868 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117869 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 117928 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 117929 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 117985 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 117986 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag--- 118042 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 118043 --ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttat 118100 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118101 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 118156
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 702 bits (354), Expect = 0.0 Identities = 491/536 (91%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 267 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |||| Sbjct: 268 ggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcac 327 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | ||||||||||||||||||| |||| |||| || | |||||||||| Sbjct: 328 cccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtag 387 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 447 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 448 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 507 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||||| Sbjct: 508 agtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctc 564 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 565 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag--- 621 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 622 --ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttat 679 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 680 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 694 bits (350), Expect = 0.0 Identities = 490/536 (91%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 209 agcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaac 268 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||| |||||| | |||||||| |||||||||||| ||||| | | |||| Sbjct: 269 ggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcac 328 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 | ||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 329 catagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccgagtag 388 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 389 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactc 448 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 449 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatagggg 508 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||||| Sbjct: 509 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctc 565 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 566 tgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag--- 622 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 623 --ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttat 680 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 681 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 736
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 694 bits (350), Expect = 0.0 Identities = 356/358 (99%) Strand = Plus / Plus Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 239 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 299 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 358 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 359 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 419 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 478 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 479 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 358
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 692 bits (349), Expect = 0.0 Identities = 493/540 (91%), Gaps = 12/540 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 209 agcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaac 268 Query: 61 ggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgcc 116 ||||||||||| |||| |||||| || ||| ||||||||||||||| ||||||| | Sbjct: 269 ggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcct 328 Query: 117 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 176 |||||| |||||| | ||||||||| |||||||||| || | |||||||||| |||||| Sbjct: 329 gcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaacccga 388 Query: 177 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 448 Query: 237 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 508 Query: 297 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 356 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| || Sbjct: 509 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgga 565 Query: 357 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 416 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 566 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 625 Query: 417 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 476 | ||||||||||||||||||||||||||| |||||| | |||| ||||||||||| Sbjct: 626 g-----ggaacccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcactgc 680 Query: 477 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 681 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 740
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 680 bits (343), Expect = 0.0 Identities = 489/536 (91%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 192 agcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaac 251 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | |||| Sbjct: 252 ggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcac 311 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| | ||||||||| |||||||||| || ||||| ||||| ||||||||| Sbjct: 312 cctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagtaa 371 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgggg 491 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| | |||| ||||||||||||||| ||| |||||| Sbjct: 492 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaatcggatctc 548 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 549 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 608 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | | | ||||||||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 609 aag--aaccaccggagccatagcgaaagcgagtcttcccagggcaattgtcactgcttat 666 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 667 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 722
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 670 bits (338), Expect = 0.0 Identities = 341/342 (99%) Strand = Plus / Plus Query: 195 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 255 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 315 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 375 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 435 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 494 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 495 gtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgatctatccatgaccaggatgaagcttggatgaaactaag 342
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 664 bits (335), Expect = 0.0 Identities = 488/537 (90%), Gaps = 9/537 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117941 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 117882 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 117881 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 117822 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactag-cttatgctctgacccgagta 179 ||||||||| | |||||||||||||||||||| || | || ||||||| ||||||||| Sbjct: 117821 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagta 117762 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117761 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 117702 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117701 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 117642 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 117641 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatct 117585 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 117584 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-- 117527 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| Sbjct: 117526 ---ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactactta 117470 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 117469 tggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaag 117413 Score = 664 bits (335), Expect = 0.0 Identities = 488/537 (90%), Gaps = 9/537 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 90161 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 90220 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 90221 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 90280 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactag-cttatgctctgacccgagta 179 ||||||||| | |||||||||||||||||||| || | || ||||||| ||||||||| Sbjct: 90281 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagta 90340 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 90341 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 90400 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 90401 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 90460 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 90461 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatct 90517 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 90518 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-- 90575 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| Sbjct: 90576 ---ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactactta 90632 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 90633 tggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaag 90689
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 654 bits (330), Expect = 0.0 Identities = 345/349 (98%), Gaps = 2/349 (0%) Strand = Plus / Minus Query: 190 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 250 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 310 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 370 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 427 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 428 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 487 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122520 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122472 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123261 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 123202 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123201 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123142 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 123141 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtag 123082 Query: 181 catggggcacgtggaatc 198 |||||||||||||||||| Sbjct: 123081 catggggcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 654 bits (330), Expect = 0.0 Identities = 345/349 (98%), Gaps = 2/349 (0%) Strand = Plus / Minus Query: 190 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 250 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 310 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 370 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 427 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 428 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 487 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825061 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 12825013 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825802 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 12825743 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825742 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 12825683 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 12825682 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtag 12825623 Query: 181 catggggcacgtggaatc 198 |||||||||||||||||| Sbjct: 12825622 catggggcacgtggaatc 12825605 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 135 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 194 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 646 bits (326), Expect = 0.0 Identities = 476/524 (90%), Gaps = 9/524 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2252 agcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaac 2311 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||| Sbjct: 2312 ggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcac 2371 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactag-cttatgctctgacccgagta 179 ||||||||| | |||||||||||||||||||| || | || ||||||| ||||||||| Sbjct: 2372 cctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagta 2431 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2432 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatact 2491 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2492 cctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggg 2551 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 2552 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatct 2608 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2609 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-- 2666 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| Sbjct: 2667 ---ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactactta 2723 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagctt 523 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2724 tggacccgaacctgggtgatctaaccatgaccaggatgaagctt 2767
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 624 bits (315), Expect = e-176 Identities = 393/416 (94%), Gaps = 6/416 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 146 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 147 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 206 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 266 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 326 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 327 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 386 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 387 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 441 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 497
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 618 bits (312), Expect = e-174 Identities = 484/537 (90%), Gaps = 12/537 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 208 agcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaac 267 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcgg-ttgagtgccgca 119 |||||||||||||||||||| |||||| ||||||||||||||||| | || | || ||| Sbjct: 268 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgca 327 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||| | |||||||||||| || ||||||||||||||| Sbjct: 328 ccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagta 387 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 gcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 447 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 448 cctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattggg 506 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||| ||||||||||||||| | || | || Sbjct: 507 gagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagccaggg--ct 561 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 562 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-- 619 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 479 |||||||||||||||| |||||||||||||| || ||||| | |||||||||||||| Sbjct: 620 ---ggaacccaccggagccatagcgaaagcgagtattcataggactattgtcactgctta 676 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 677 tggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaag 733
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 611 bits (308), Expect = e-171 Identities = 389/413 (94%), Gaps = 6/413 (1%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 349 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgca 119 ||||||||||||||||||||||||||| ||||||||||||||||| | || ||| ||| Sbjct: 348 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgca 289 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 ccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 229 Query: 180 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 228 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatact 169 Query: 240 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 299 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 168 cctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 109 Query: 300 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 359 ||||||||||||| |||||||| | |||||||||||||||||||| | || | || Sbjct: 108 gagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ct 54 Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 1
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 605 bits (305), Expect = e-170 Identities = 308/309 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 267 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 327 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 328 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 387 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 447 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 507 Query: 301 agtgaaata 309 ||||||||| Sbjct: 508 agtgaaata 516
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 597 bits (301), Expect = e-167 Identities = 304/305 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 181 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 241 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 242 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 301 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 361 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 421 Query: 301 agtga 305 ||||| Sbjct: 422 agtga 426
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 579 bits (292), Expect = e-162 Identities = 437/482 (90%), Gaps = 10/482 (2%) Strand = Plus / Minus Query: 56 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 115 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 116 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 175 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 176 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 236 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 296 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 355 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 356 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 415 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 416 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 475 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 476 c-ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 534 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagc-tggatgaaacta 5814 Query: 535 ag 536 || Sbjct: 5813 ag 5812 Score = 107 bits (54), Expect = 4e-20 Identities = 54/54 (100%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 54 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6368 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 565 bits (285), Expect = e-158 Identities = 332/347 (95%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 46460 agcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaac 46519 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 46520 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcac 46579 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46580 cctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 46639 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46640 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 46699 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 46700 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 46759 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46760 agtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 291 bits (147), Expect = 1e-75 Identities = 171/179 (95%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 46991
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 565 bits (285), Expect = e-158 Identities = 332/347 (95%), Gaps = 3/347 (0%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130327 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 130268 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 130267 ggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 130208 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130207 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 130148 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130147 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 130088 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 130087 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 130028 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130027 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 565 bits (285), Expect = e-158 Identities = 332/347 (95%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102129 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 102188 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 102189 ggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcac 102248 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102249 cctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 102308 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102309 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 102368 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 102369 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 102428 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102429 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 276 bits (139), Expect = 7e-71 Identities = 169/179 (94%), Gaps = 5/179 (2%) Strand = Plus / Minus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 129796 Score = 276 bits (139), Expect = 7e-71 Identities = 169/179 (94%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 102660
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 549 bits (277), Expect = e-153 Identities = 330/347 (95%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 208 bits (105), Expect = 1e-50 Identities = 135/145 (93%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 392 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 451 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 452 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 511 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 512 aggatgaagcttggatgaaactaag 536 |||||||||||||| |||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaag 731
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 549 bits (277), Expect = e-153 Identities = 330/347 (95%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 456 ctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccggg 515 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 260 bits (131), Expect = 4e-66 Identities = 167/179 (93%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 549 bits (277), Expect = e-153 Identities = 330/347 (95%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 238 bits (120), Expect = 2e-59 Identities = 167/180 (92%), Gaps = 7/180 (3%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 418 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 476 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 477 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 543 bits (274), Expect = e-151 Identities = 360/386 (93%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 316 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || Sbjct: 317 ggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaac 376 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 377 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 436 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 496 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 497 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgggg 556 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatct 359 ||||||||||||| |||||||| | ||||||||||||| |||||| | || | || Sbjct: 557 agtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg--ct 611 Query: 360 ctgaccgcgtgcctgttgaagaatga 385 |||||||||||||||||||||||||| Sbjct: 612 ctgaccgcgtgcctgttgaagaatga 637
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 541 bits (273), Expect = e-151 Identities = 329/347 (94%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccggg 515 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 226 bits (114), Expect = 6e-56 Identities = 164/179 (91%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 541 bits (273), Expect = e-151 Identities = 329/347 (94%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 336 cctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgggg 515 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 516 agtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 228 bits (115), Expect = 1e-56 Identities = 164/179 (91%), Gaps = 6/179 (3%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 753
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 537 bits (271), Expect = e-149 Identities = 467/530 (88%), Gaps = 13/530 (2%) Strand = Plus / Minus Query: 2 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 61 |||||||||||||||| |||||||||||||||| ||||| ||||||||||||| |||| Sbjct: 139061 gcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacg 139002 Query: 62 gggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccg 117 ||||||||||||||| ||| ||| ||||||||| |||| |||||||| |||| ||| Sbjct: 139001 gggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccg 138943 Query: 118 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 177 || || ||| || || ||||| ||||||| ||||| ||| ||||| ||||||||||||| Sbjct: 138942 catcccagacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgag 138883 Query: 178 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 237 |||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||||| Sbjct: 138882 tagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaata 138823 Query: 238 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 297 || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 138822 cttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcg 138763 Query: 298 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 357 || ||||||||||||| |||||||| | ||||||| |||||||||||| ||| ||| Sbjct: 138762 gggagtgaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggat 138706 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||| Sbjct: 138705 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag 138646 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||||||||||||||||||||||||||||||||| ||||| | |||| ||||| Sbjct: 138645 -----ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgct 138591 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 527 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138590 tatggacccgaacccgggtgatctatccatgaccaggatgaagcttggat 138541 Score = 537 bits (271), Expect = e-149 Identities = 467/530 (88%), Gaps = 13/530 (2%) Strand = Plus / Plus Query: 2 gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacg 61 |||||||||||||||| |||||||||||||||| ||||| ||||||||||||| |||| Sbjct: 82816 gcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacg 82875 Query: 62 gggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccg 117 ||||||||||||||| ||| ||| ||||||||| |||| |||||||| |||| ||| Sbjct: 82876 gggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccg 82934 Query: 118 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 177 || || ||| || || ||||| ||||||| ||||| ||| ||||| ||||||||||||| Sbjct: 82935 catcccagacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgag 82994 Query: 178 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 237 |||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||||| Sbjct: 82995 tagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaata 83054 Query: 238 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 297 || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 83055 cttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcg 83114 Query: 298 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 357 || ||||||||||||| |||||||| | ||||||| |||||||||||| ||| ||| Sbjct: 83115 gggagtgaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggat 83171 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||| Sbjct: 83172 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag 83231 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||||||||||||||||||||||||||||||||| ||||| | |||| ||||| Sbjct: 83232 -----ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgct 83286 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 527 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83287 tatggacccgaacccgggtgatctatccatgaccaggatgaagcttggat 83336
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 513 bits (259), Expect = e-142 Identities = 331/353 (93%), Gaps = 4/353 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 275 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | || Sbjct: 276 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtac 335 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 336 cctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 395 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 455 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 456 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcgggg 514 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 353 ||||||||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 515 agtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564 Score = 202 bits (102), Expect = 8e-49 Identities = 111/114 (97%) Strand = Plus / Plus Query: 423 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 482 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 483 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 715
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 496 bits (250), Expect = e-137 Identities = 253/254 (99%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 172 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 232 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 233 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 292 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 352 Query: 241 ctgggtgaccgata 254 |||||||||||||| Sbjct: 353 ctgggtgaccgata 366
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 466 bits (235), Expect = e-128 Identities = 271/283 (95%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 244 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| Sbjct: 245 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcac 304 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 305 cctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 364 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 424 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 283 |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 425 ctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 464 bits (234), Expect = e-127 Identities = 463/536 (86%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| || Sbjct: 144128 agcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagac 144187 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||| || || | || | ||||||||||| ||||||||| |||| Sbjct: 144188 ggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcac 144247 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | ||||||||||||| ||| | |||||| | |||| |||| ||||| Sbjct: 144248 cccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtag 144307 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| || Sbjct: 144308 catggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattc 144367 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 144368 ctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 144427 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| ||||||||||||||||||||| ||| | |||||| Sbjct: 144428 agtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctc 144484 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 | ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 144485 taaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg- 144543 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||| |||||||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 144544 ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttat 144602 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 144603 aaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 144658 Score = 464 bits (234), Expect = e-127 Identities = 463/536 (86%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| || Sbjct: 88723 agcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagac 88664 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||| || || | || | ||||||||||| ||||||||| |||| Sbjct: 88663 ggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcac 88604 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 || |||||| | ||||||||||||| ||| | |||||| | |||| |||| ||||| Sbjct: 88603 cccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtag 88544 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| || Sbjct: 88543 catggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattc 88484 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 88483 ctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgggg 88424 Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| |||||||| ||||||||||||||||||||| ||| | |||||| Sbjct: 88423 agtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctc 88367 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 | ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 88366 taaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg- 88308 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 |||||| |||||||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 88307 ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttat 88249 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 88248 aaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 88193
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 456 bits (230), Expect = e-125 Identities = 279/293 (95%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 264 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| |||||||||||||||||||| || | | |||| Sbjct: 265 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcac 324 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 325 cctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 384 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatacta 444 Query: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 293 | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 445 c--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 170 bits (86), Expect = 3e-39 Identities = 130/142 (91%), Gaps = 7/142 (4%) Strand = Plus / Plus Query: 398 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 456 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 457 aatagggcgattgtcactgcttatggacccgaacc--tgggtgatctatccatgaccagg 514 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 515 atgaagcttggatgaaactaag 536 ||||||||||| |||||||||| Sbjct: 729 atgaagcttgggtgaaactaag 750
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 434 bits (219), Expect = e-118 Identities = 240/247 (97%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 192 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 ||||||||||||||||||||||||||| ||||||||||||||||| || || ||| |||| Sbjct: 191 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcac 132 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131 cctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 72 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 12 Query: 241 ctgggtg 247 ||||||| Sbjct: 11 ctgggtg 5
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 132 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 191 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 192 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 252 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 311 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 312 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 371 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 372 ctgttgaagaatgagccggcgactcataggcagtggcttg 411 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 416 bits (210), Expect = e-113 Identities = 384/440 (87%), Gaps = 9/440 (2%) Strand = Plus / Plus Query: 93 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 152 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 153 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 212 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 213 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 272 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 273 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 332 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 333 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 392 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 393 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 452 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 453 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 512 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 654 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 712 Query: 513 ggatgaagcttggatgaaac 532 ||||||||||||| |||||| Sbjct: 713 ggatgaagcttgggtgaaac 732 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 210 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 269 Query: 61 ggggttgtgggagagc 76 |||||||||||||||| Sbjct: 270 ggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 412 bits (208), Expect = e-112 Identities = 382/438 (87%), Gaps = 9/438 (2%) Strand = Plus / Minus Query: 93 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 152 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 153 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 212 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 213 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 272 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 273 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 332 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 333 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 392 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 393 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 452 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 453 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 512 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 124611 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 124553 Query: 513 ggatgaagcttggatgaa 530 ||||||||||||| |||| Sbjct: 124552 ggatgaagcttgggtgaa 124535 Score = 412 bits (208), Expect = e-112 Identities = 382/438 (87%), Gaps = 9/438 (2%) Strand = Plus / Plus Query: 93 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 152 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 153 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 212 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 213 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 272 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 273 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 332 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 333 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 392 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 393 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 452 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 453 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 512 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 95255 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 95313 Query: 513 ggatgaagcttggatgaa 530 ||||||||||||| |||| Sbjct: 95314 ggatgaagcttgggtgaa 95331 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 125055 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 124996 Query: 61 ggggttgtgggagagc 76 |||||||||||||||| Sbjct: 124995 ggggttgtgggagagc 124980 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| | Sbjct: 94811 agcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagc 94870 Query: 61 ggggttgtgggagagc 76 |||||||||||||||| Sbjct: 94871 ggggttgtgggagagc 94886
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 406 bits (205), Expect = e-110 Identities = 323/360 (89%), Gaps = 8/360 (2%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 411 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 470 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 471 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 530 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 670 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 729 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 54 |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 197 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 406 bits (205), Expect = e-110 Identities = 323/360 (89%), Gaps = 8/360 (2%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 411 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 470 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 471 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 530 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 683 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 742 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 54 |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 210 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 8 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 68 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 126 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 127 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 186 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 187 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 246 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 247 gaccgata 254 |||||||| Sbjct: 241 gaccgata 248
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 400 bits (202), Expect = e-108 Identities = 323/360 (89%), Gaps = 10/360 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 411 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 412 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 470 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 471 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 530 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 787 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 846 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 314 agcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 389 bits (196), Expect = e-105 Identities = 344/390 (88%), Gaps = 10/390 (2%) Strand = Plus / Plus Query: 147 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 206 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 207 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 266 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 267 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 326 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 327 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 386 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 387 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 446 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 447 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 506 ||| |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaacca 722 Query: 507 tgaccaggatgaagcttggatgaaactaag 536 ||||||||||||| |||| |||||||||| Sbjct: 723 tgaccaggatgaaatttggttgaaactaag 752 Score = 63.9 bits (32), Expect = 5e-07 Identities = 103/126 (81%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| Sbjct: 203 agcaaaagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaat 262 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 |||||| || |||||||| ||| ||||| |||||| |||||| || |||| | | || Sbjct: 263 ggggtt---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaac 319 Query: 121 cctaga 126 |||||| Sbjct: 320 cctaga 325
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 361 bits (182), Expect = 2e-96 Identities = 320/362 (88%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 411 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 412 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 471 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 472 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 531 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 670 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 729 Query: 532 ct 533 || Sbjct: 730 ct 731 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 197 agcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 361 bits (182), Expect = 2e-96 Identities = 320/362 (88%), Gaps = 8/362 (2%) Strand = Plus / Minus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 411 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 412 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 471 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 472 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 531 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 114933 Query: 532 ct 533 || Sbjct: 114932 ct 114931 Score = 361 bits (182), Expect = 2e-96 Identities = 320/362 (88%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 411 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 412 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 471 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 472 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 531 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 87055 Query: 532 ct 533 || Sbjct: 87056 ct 87057 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115466 agcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86522 agcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 361 bits (182), Expect = 2e-96 Identities = 362/420 (86%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 117 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 176 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 177 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 236 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 237 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 296 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 297 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 356 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 357 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 416 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 417 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 476 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 4725 Query: 477 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 4726 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 4785 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 50 |||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4242 agcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 361 bits (182), Expect = 2e-96 Identities = 362/420 (86%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 117 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 176 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 177 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 236 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 237 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 296 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 297 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 356 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 357 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 416 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 417 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 476 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 477 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 693 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 50 |||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 209 agcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 361 bits (182), Expect = 2e-96 Identities = 362/420 (86%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 117 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 176 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 177 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 236 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 237 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 296 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 297 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 356 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 357 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 416 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 417 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 476 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 477 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 693 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 50 |||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 209 agcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 117 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 176 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 177 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 236 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 237 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 296 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 297 gggtagtgaaatagaacgtgaaaccgt 323 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 337 bits (170), Expect = 2e-89 Identities = 248/272 (91%), Gaps = 9/272 (3%) Strand = Plus / Plus Query: 265 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 324 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 325 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 384 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 385 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 444 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 445 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 504 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 505 catgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||| |||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaag 263
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 3e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 266 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 325 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 326 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 385 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 386 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 321 bits (162), Expect = 1e-84 Identities = 321/372 (86%), Gaps = 4/372 (1%) Strand = Plus / Plus Query: 165 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 224 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 225 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 284 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 285 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 344 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 345 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 404 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 405 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 464 ||||| ||||||||||| | ||| |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcagggc 675 Query: 465 gattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttg 524 |||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttg 735 Query: 525 gatgaaactaag 536 | |||||||||| Sbjct: 736 ggtgaaactaag 747 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 50 ||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 210 agcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 317 bits (160), Expect = 2e-83 Identities = 311/360 (86%), Gaps = 11/360 (3%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 411 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 470 ||||||| ||| || ||||||||||||||||| |||| | || |||| ||| Sbjct: 574 ggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatgt 625 Query: 471 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 530 ||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| Sbjct: 626 cactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaa 685 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 164 agcaaaagcgattccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 317 bits (160), Expect = 2e-83 Identities = 304/350 (86%), Gaps = 9/350 (2%) Strand = Plus / Plus Query: 176 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 235 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 236 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 295 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 296 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 355 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggaggaggattga 561 Query: 356 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 415 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 416 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 475 |||||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 agggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675 Query: 476 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 676 tttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgg 725 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| ||||| ||||||||||| |||| |||||||||||| |||| | Sbjct: 210 agcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagc 269 Query: 61 ggggttgtggga 72 |||||||||||| Sbjct: 270 ggggttgtggga 281
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 313 bits (158), Expect = 3e-82 Identities = 343/400 (85%), Gaps = 11/400 (2%) Strand = Plus / Plus Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-cccgag 177 ||||||||||| | |||||||||| |||| |||| ||||||||||| | | |||||| Sbjct: 319 accctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaacccgag 378 Query: 178 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 237 ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 379 tagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaata 438 Query: 238 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 297 ||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 439 ctcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacccccattg 498 Query: 298 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 357 || |||||| |||||| ||||| | | ||| ||||||||||||||| || || | Sbjct: 499 gggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagacaggg-- 553 Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatg 517 | ||||||||||| ||||||||||| |||||||||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatg 708
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 311 bits (157), Expect = 1e-81 Identities = 244/270 (90%), Gaps = 11/270 (4%) Strand = Plus / Plus Query: 267 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 326 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 327 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 386 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 387 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 446 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 447 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 506 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 507 tgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||| |||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaag 259
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 307 bits (155), Expect = 2e-80 Identities = 158/159 (99%) Strand = Plus / Plus Query: 378 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 438 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 497 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 498 atctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaag 160
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 305 bits (154), Expect = 8e-80 Identities = 157/158 (99%) Strand = Plus / Plus Query: 379 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 439 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 498 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 499 tctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaag 158
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 303 bits (153), Expect = 3e-79 Identities = 300/345 (86%), Gaps = 13/345 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 411 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 412 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 468 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 469 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 513 |||||| |||||||||||||||| || ||||||||||||| |||| Sbjct: 661 gtcacttcttatggacccgaaccgggatgatctatccatggccag 705 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaa 34 ||||||||||||| || ||||||||||||||||| Sbjct: 189 agcaaaagcgatttccttagtagcggcgagcgaa 222
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 303 bits (153), Expect = 3e-79 Identities = 202/216 (93%), Gaps = 3/216 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2808 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 2867 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 118 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 2868 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 2927 Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 178 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2928 accctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagt 2986 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaa 214 ||||| |||||||||||||||||||||||||||||| Sbjct: 2987 agcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 303 bits (153), Expect = 3e-79 Identities = 202/216 (93%), Gaps = 3/216 (1%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 1122 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgc 118 |||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| || Sbjct: 1123 ggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgc 1182 Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 178 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1183 accctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagt 1241 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaa 214 ||||| |||||||||||||||||||||||||||||| Sbjct: 1242 agcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 293 bits (148), Expect = 3e-76 Identities = 307/360 (85%), Gaps = 10/360 (2%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 411 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 470 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 471 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 530 ||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaa 1133 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 54 |||||||||||||||| |||||| ||||||||||| |||| ||||||||||||| Sbjct: 610 agcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 291 bits (147), Expect = 1e-75 Identities = 171/179 (95%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 235
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 291 bits (147), Expect = 1e-75 Identities = 171/179 (95%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 219
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 291 bits (147), Expect = 1e-75 Identities = 171/179 (95%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 177578 Score = 242 bits (122), Expect = 1e-60 Identities = 162/174 (93%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 177239 agcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccgtgaaaac 177298 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgca 119 ||||||||||||||||||||||||||| |||| |||||||||||| | || ||| ||| Sbjct: 177299 ggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccgaatgctgca 177358 Query: 120 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 173 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177359 ccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 125 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 183 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 184 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 243 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 244 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 303 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 304 gaaatagaacgtgaaaccgtgctgagctcc 333 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 125 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 183 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 184 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 243 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 244 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 303 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 304 gaaatagaacgtgaaaccgtgctgagctcc 333 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 125 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 183 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 184 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 243 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 244 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 303 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 304 gaaatagaacgtgaaaccgtgctgagctcc 333 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 381 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 440 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 441 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 498 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9056697 Query: 499 tctatccatgaccaggat 516 | |||||||||| ||||| Sbjct: 9056698 tttatccatgactaggat 9056715 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 326 tgagctcccaagcagtgggaggggaaagtgatc 358 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 125 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 183 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 184 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 243 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 244 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 303 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 304 gaaatagaacgtgaaaccgtgctgagctcc 333 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 381 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 440 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 441 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 498 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9128394 Query: 499 tctatccatgaccaggat 516 | |||||||||| ||||| Sbjct: 9128395 tttatccatgactaggat 9128412 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 326 tgagctcccaagcagtgggaggggaaagtgatc 358 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 280 bits (141), Expect = 5e-72 Identities = 207/229 (90%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||| ||||||||||||| || |||| ||||||||||||||||||||||| |||| Sbjct: 3606 agcaaaagtgattcccgtagtaacgacgagtgaaatgggagcagcctaaaccgtaaaaat 3547 Query: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 | ||||||||||||||||| ||| ||| |||| ||||||| ||||||| ||||| |||| Sbjct: 3546 gaggttgtgggagagcaatgcaaacgtagtgccgctaggcaaagcggtggagtgttgcac 3487 Query: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 180 |||||||||| | ||| |||||||||||||||| |||||||| |||||||||||||||| Sbjct: 3486 cctagatggcgagagtttagtagccgaaagcatccctagcttacgctctgacccgagtag 3427 Query: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 229 |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3426 catggggcacgtggaatcccgtgtgaattagcaaggaccaccttgcaag 3378 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 478 tatggacccgaacct 492 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 238 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 297 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 298 ggtagtgaaatagaacgtgaaacc 321 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 276 bits (139), Expect = 7e-71 Identities = 215/237 (90%), Gaps = 10/237 (4%) Strand = Plus / Plus Query: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 421 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 479 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 411 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 412 gttaagg 418 ||||||| Sbjct: 644 gttaagg 650 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 469 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 521 |||||| |||||||||||||||| || ||||||| |||| |||| ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatctaggcatggccagaatgaagc 774 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 51 |||||| |||||| || ||||||||||||||||| || | |||||||||| Sbjct: 197 agcaaacgcgatttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 260 bits (131), Expect = 4e-66 Identities = 305/357 (85%), Gaps = 12/357 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 290 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 411 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc--gatt 468 ||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| || Sbjct: 590 ggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatc 645 Query: 469 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 |||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 646 gtcactttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 702 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 51 |||||| ||||||||| |||||||||||||||||| |||| |||||||||| Sbjct: 107 agcaaacgcgattcccctagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 4e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 166 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 225 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 226 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 285 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 286 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 345 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 346 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 405 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 406 ggcttggttaagg 418 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 490 cctgggtgatctatccatgaccaggatgaagcttggatgaaac 532 || |||||||||||||||| ||||||||||| |||| |||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaac 694 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 ||||||||||||| || |||||| ||||||||||| || | ||||||||||| Sbjct: 167 agcaaaagcgatttccttagtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 411 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 412 gttaagg 418 ||||||| Sbjct: 611 gttaagg 617 Score = 93.7 bits (47), Expect = 6e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 490 cctgggtgatctatccatgaccaggatgaagcttggatgaaac 532 || |||||||||| ||||| |||||| ||||||||| |||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaac 726 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 197 agcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaaccg 249
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 100 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 159 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 160 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 219 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 220 accttgcaaggctaaatactcctgggtgaccga 252 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 710 gggtgatctaaccatggccaggatgaagcttgg 742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||||||||||||| |||||||||||||| || |||| |||||||||||| Sbjct: 197 agcaaaagcgattccctgagtagcggcgagcggaaagggaacagcctaaaccg 249
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 2479 gggtgatctaaccatggccaggatgaagcttgg 2511 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||||||||||||| |||||||||||||| || |||| |||||||||||| Sbjct: 1963 agcaaaagcgattccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 9e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 119 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 178 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 179 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 238 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 239 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 298 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 299 gtagtgaaatagaacgtgaaa 319 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 170 bits (86), Expect = 3e-39 Identities = 157/179 (87%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaag 739 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||| ||| || |||||| |||||| |||| |||| |||||||||||| |||| Sbjct: 205 agcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaaccgctaaaat 264 Query: 61 ggggttg 67 ||||||| Sbjct: 265 ggggttg 271
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 230 bits (116), Expect = 4e-57 Identities = 165/180 (91%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 416 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 417 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 476 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 477 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 314 gtgaaa 319 ||||| Sbjct: 503 atgaaa 508 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 714
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 gg 419 || Sbjct: 602 gg 603 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 474 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 533 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 534 aag 536 ||| Sbjct: 713 aag 715
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 314 gtgaaa 319 ||||| Sbjct: 503 atgaaa 508 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 714
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 1e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 349 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 350 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 409 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 410 tggttaagg 418 ||||||||| Sbjct: 621 tggttaagg 629 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 210 agcaaacgcgattcccgtagtagcggcgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 469 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 513 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 1e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 349 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 350 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 409 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 410 tggttaagg 418 ||||||||| Sbjct: 621 tggttaagg 629 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 210 agcaaacgcgattcccgtagtagcggcgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 469 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 513 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 2e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 352 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 2 gcaaaagcgattcccgtagtagcggcgagcgaaatggga 40 ||||||||||||||| ||||||||||||||||||||||| Sbjct: 198 gcaaaagcgattcccttagtagcggcgagcgaaatggga 236 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 469 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 520 |||||| ||||||||||||||||||| ||||||| |||||| || ||||||| Sbjct: 806 gtcacttcttatggacccgaacctggatgatctaaccatgagcatgatgaag 857
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccg 322 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgact 395 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 189 agcaaacgcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 441 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 498 ||||||||||||||| |||||||| | |||| | |||| ||||||||||| || || Sbjct: 873 agcgaaagcgagtctgaatagggcatataagtcatttcttacggacccgaacccggtcga 932 Query: 499 tctatccatgaccaggatgaagct 522 |||| ||||| ||||||||||||| Sbjct: 933 tctaaccatgtccaggatgaagct 956
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 3e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 134 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 193 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 194 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 253 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 254 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 313 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 314 gtgaaa 319 ||||| Sbjct: 504 atgaaa 509 Score = 67.9 bits (34), Expect = 3e-08 Identities = 144/179 (80%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 358 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 417 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 418 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 477 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaag 715
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 5e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 190 agcaaaagcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgact 395 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 476 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 |||| ||||||||||| || |||||| ||||| |||||||||||||||| Sbjct: 1030 cttacggacccgaacccggtcgatctaaccatgtccaggatgaagcttgg 1079
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 5e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 194 agcaaaagcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 359 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 480 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 |||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 712 tggacccgaacccgggtgatctaatcatgaccaggatgaagcttgg 757 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 gcgaaagcgagtcttaatagggcga 466 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 5e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 349 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 350 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 407 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 81.8 bits (41), Expect = 2e-12 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgatt---gtcactgcttatggaccc 486 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 487 gaacctgggtgatctatccatgaccag 513 ||||| ||||||||||| ||||||||| Sbjct: 745 gaacccgggtgatctattcatgaccag 771 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| |||||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 191 agcaaacgcgattcccgtagtagtggcgagcgaaccgggaacagcctaaacc 242
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 202 bits (102), Expect = 8e-49 Identities = 111/114 (97%) Strand = Plus / Plus Query: 423 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 482 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 483 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 536 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 118
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 8e-49 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 290 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 411 ggttaagg 418 |||||||| Sbjct: 675 ggttaagg 682 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 ||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 190 agcaaaagcgattcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 488 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 489 acctgggtgatctatccatgaccaggatgaagcttgg 525 ||| |||||||||| | |||||||||||||| |||| Sbjct: 751 acccgggtgatctaatcctgaccaggatgaagtttgg 787
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 8e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 291 cc 292 || Sbjct: 493 cc 494 Score = 105 bits (53), Expect = 1e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 362 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 468 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 523 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 198 agcaaacgcgattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 8e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 176 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 235 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 236 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 295 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 296 tgggtagtgaaatagaacgtgaaacc 321 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| |||||| ||||||||||| |||| | ||||||||||| ||| | Sbjct: 1977 agcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagc 2036 Query: 61 ggggttgtggga 72 |||||||||||| Sbjct: 2037 ggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 3e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 290 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 291 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 349 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 350 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 409 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 410 tggttaagg 418 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 3e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 290 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 291 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 349 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 350 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 409 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 410 tggttaagg 418 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/97 (87%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 488 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 489 acctgggtgatctatccatgaccaggatgaagcttgg 525 |||||| ||||||| |||| ||||| |||||||||| Sbjct: 155526 acctggatgatctaatcatggccaggttgaagcttgg 155490 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/97 (87%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 488 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 489 acctgggtgatctatccatgaccaggatgaagcttgg 525 |||||| ||||||| |||| ||||| |||||||||| Sbjct: 78366 acctggatgatctaatcatggccaggttgaagcttgg 78402 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 ||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156089 agcaaaagcgattcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 ||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77803 agcaaaagcgattcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 232 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 348 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 349 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 409 tt 410 || Sbjct: 636 tt 637 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/86 (87%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 442 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 499 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 500 ctatccatgaccaggatgaagcttgg 525 ||| ||||||||||||||||||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgg 752 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaa 34 |||||| ||||||||||||||||||||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagcggcgagcgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 190 agcaaaagcgattcccgtagtagcggcgagcgaactgggactagcctaaacc 241 Score = 65.9 bits (33), Expect = 1e-07 Identities = 77/89 (86%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 490 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 491 ctgggtgatctatccatgaccaggatgaa 519 | |||||||||| |||| |||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaa 906
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 111 bits (56), Expect = 2e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 489 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 490 cctgggtgatctatccatgaccaggatgaagcttgg 525 || ||||||||||| |||| |||||||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgg 743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 409 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 51 |||||| |||||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 209 agcaaacgcgattcccgtagtagtggcgagcgaactgggaacagcctaaac 259
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 103 bits (52), Expect = 6e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 487 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttgg 525 |||| ||||||||||| |||| |||||||||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgg 798 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 209 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 260
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 189 agcaaaagcgattcccgtagtagcggcgagcgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 416 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 74/88 (84%), Gaps = 4/88 (4%) Strand = Plus / Plus Query: 442 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaacctgggtg 497 |||||||||||||| || |||||| |||||||| ||| |||||||||||| |||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaacccaggtg 732 Query: 498 atctatccatgaccaggatgaagcttgg 525 ||||| |||||||||| |||||||||| Sbjct: 733 atctaaccatgaccagattgaagcttgg 760
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 232 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 348 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 349 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 409 tt 410 || Sbjct: 617 tt 618 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/86 (87%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 442 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 499 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 707 Query: 500 ctatccatgaccaggatgaagcttgg 525 ||| ||||||||||||||||||||| Sbjct: 708 ctaatcatgaccaggatgaagcttgg 733 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaa 34 |||||| ||||||||||||||||||||||||||| Sbjct: 189 agcaaacgcgattcccgtagtagcggcgagcgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 103 bits (52), Expect = 6e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 487 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttgg 525 |||| ||||||||||| |||| |||||||||||||||| Sbjct: 151680 aacccgggtgatctattcatggccaggatgaagcttgg 151643 Score = 103 bits (52), Expect = 6e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 487 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttgg 525 |||| ||||||||||| |||| |||||||||||||||| Sbjct: 42523 aacccgggtgatctattcatggccaggatgaagcttgg 42560 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 152172 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 152121 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 42031 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 42082
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 198 bits (100), Expect = 1e-47 Identities = 155/172 (90%), Gaps = 6/172 (3%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 532 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaac 732 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 176 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 235 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 236 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 295 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 296 tgggtagtgaaatagaacgtgaaacc 321 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||| | Sbjct: 210 agcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagc 269 Query: 61 ggggttgtgggaga 74 |||||||||||||| Sbjct: 270 ggggttgtgggaga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 198 bits (100), Expect = 1e-47 Identities = 155/172 (90%), Gaps = 6/172 (3%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 532 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaac 3766 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 176 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 235 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 236 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 295 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 296 tgggtagtgaaatagaacgtgaaacc 321 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 |||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||| | Sbjct: 3244 agcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagc 3303 Query: 61 ggggttgtgggaga 74 |||||||||||||| Sbjct: 3304 ggggttgtgggaga 3317
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 232 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 348 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 349 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 409 tt 410 || Sbjct: 636 tt 637 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/86 (87%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 442 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 499 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 500 ctatccatgaccaggatgaagcttgg 525 ||| ||||||||||||||||||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgg 752 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaa 34 |||||| ||||||||||||||||||||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagcggcgagcgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 103 bits (52), Expect = 6e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 487 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttgg 525 |||| ||||||||||| |||| |||||||||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgg 798 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 209 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 260
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 111 bits (56), Expect = 2e-21 Identities = 87/96 (90%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 489 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 490 cctgggtgatctatccatgaccaggatgaagcttgg 525 || ||||||||||| |||| |||||||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgg 743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 409 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 51 |||||| |||||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 209 agcaaacgcgattcccgtagtagtggcgagcgaactgggaacagcctaaac 259
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 103 bits (52), Expect = 6e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 487 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttgg 525 |||| ||||||||||| |||| |||||||||||||||| Sbjct: 695 aacccgggtgatctattcatggccaggatgaagcttgg 732 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 203 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 254
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/96 (87%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 487 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 488 aacctgggtgatctatccatgaccaggatgaagctt 523 |||| ||||||||||| |||| || ||||||||||| Sbjct: 780 aacccgggtgatctattcatggcc-ggatgaagctt 814 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 288 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 339
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 5e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 175 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 234 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 235 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 294 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 295 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 354 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 355 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 403 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 444 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 503 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 504 ccatgaccaggatgaagcttgg 525 ||||| |||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgg 343
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 292 ccagtgggtagtgaaatagaacgtgaaacc 321 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 488 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 489 acctgggtgatctatccatgaccaggatgaagcttgg 525 ||| |||||||||| |||||||||||||||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgg 717 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgact 395 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||| ||||| |||||||||||||||| | ||||||||| Sbjct: 189 agcaaacgcgattccctgagtagtggcgagcgaaatgggaacggcctaaacc 240
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 280 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 339 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 340 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 389 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 292 ccagtgggtagtgaaatagaacgtgaaacc 321 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 488 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 489 acctgggtgatctatccatgaccaggatgaagcttgg 525 ||| |||||||||| |||||||||||||||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgg 25526 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgact 395 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 24998 agcaaacgcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 25049
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 8e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 175 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 234 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 235 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 294 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 295 gtgggtagtgaaatagaacgtgaaaccgt 323 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 490 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 491 ctgggtgatctatccatgaccaggatgaagcttgg 525 | |||||||||| ||||| |||||||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgg 343 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 368 gtgcctgttgaagaatgagccggcgactcatagg 401 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 8e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 290 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 350 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 395 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 ||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 189 agcaaaagcgattcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 477 ttatggacccgaacctgggtgatcta 502 ||||||||||||||| |||||||||| Sbjct: 804 ttatggacccgaacccgggtgatcta 829
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 111 bits (56), Expect = 2e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 487 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 488 aacctgggtgatctatccatgaccaggatgaagcttgg 525 |||| ||||||||||| ||||||||||||||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgg 741 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 191 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 242
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 3e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 351 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 352 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 411 ggttaagg 418 |||||||| Sbjct: 800 ggttaagg 807 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%), Gaps = 5/100 (5%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 485 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 486 cgaacctgggtgatctatccatgaccaggatgaagcttgg 525 |||||| |||||||||| ||||||||||||||||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgg 915 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 188 agcaaacgcgattcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 107 bits (54), Expect = 4e-20 Identities = 84/93 (90%), Gaps = 2/93 (2%) Strand = Plus / Plus Query: 435 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 492 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| |||||||||||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgg 748 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 209 agcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 260
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 490 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 170874 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 170815 Query: 491 ctgggtgatctatccatgaccaggatgaagcttgg 525 | |||||||||| |||||||||||||||||||||| Sbjct: 170814 ccgggtgatctaaccatgaccaggatgaagcttgg 170780 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 490 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 122052 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 122111 Query: 491 ctgggtgatctatccatgaccaggatgaagcttgg 525 | |||||||||| |||||||||||||||||||||| Sbjct: 122112 ccgggtgatctaaccatgaccaggatgaagcttgg 122146 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171309 agcaaacgcgattcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121617 agcaaacgcgattcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 347 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 431 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 490 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 643 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 702 Query: 491 ctgggtgatctatccatgaccaggatgaagcttgg 525 | |||||||||| |||||||||||||||||||||| Sbjct: 703 ccgggtgatctaaccatgaccaggatgaagcttgg 737 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 208 agcaaacgcgattcccccagtagcggcgagcgacaagggatcagcctaaaccg 260
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 290 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 291 cccagtgggtagtgaaatagaacgtgaaaccgt 323 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 159 bits (80), Expect = 1e-35 Identities = 147/168 (87%), Gaps = 6/168 (3%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 419 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 420 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 477 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 478 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 |||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgg 792 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 197 agcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 8e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 290 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 291 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 347 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 348 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 401 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/87 (89%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 441 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaacctgggtga 498 ||||||||||||||| ||||||||| | ||||| | ||||||||||||||||||| ||| Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacctggatga 702 Query: 499 tctatccatgaccaggatgaagcttgg 525 |||| ||||| |||||||||||||||| Sbjct: 703 tctaaccatggccaggatgaagcttgg 729 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 51 |||||||||||||||| |||||||||||||| ||||||| |||||||||| Sbjct: 191 agcaaaagcgattcccaaagtagcggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgt 323 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 430 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 489 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 490 cctgggtgatctatccatgaccaggatgaagctt 523 || |||||||||| |||||||||||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagctt 715 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 359 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 197 agcaaacgcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 292 ccagtgggtagtgaaatagaacgtgaaacc 321 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 103 bits (52), Expect = 6e-19 Identities = 78/86 (90%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 441 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 497 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 498 atctatccatgaccaggatgaagctt 523 |||||| |||||||||| |||||||| Sbjct: 719 atctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 292 ccagtgggtagtgaaatagaacgtgaaacc 321 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 482 gacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 547 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgg 590 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| |||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 42 agcaaacgcgattcccggagtagtggcgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgact 395 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 292 ccagtgggtagtgaaatagaacgtgaaacc 321 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 103 bits (52), Expect = 6e-19 Identities = 78/86 (90%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 441 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 497 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 498 atctatccatgaccaggatgaagctt 523 |||||| |||||||||| |||||||| Sbjct: 719 atctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 418 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 208 agcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 350 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 351 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 410 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 411 ggttaa 416 |||||| Sbjct: 731 ggttaa 736 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 468 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 525 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgg 843 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 52 |||||| ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 309 agcaaacgcgattcccttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 175 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 234 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 235 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 294 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 295 gtgggtagtgaaatagaacgtgaaaccgt 323 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 441 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 500 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 501 tatccatgaccaggatgaagcttgg 525 || ||||| |||||||||||||||| Sbjct: 322 taaccatgtccaggatgaagcttgg 346 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 359 tctgaccgcgtgcctgttgaagaatgagccggcga 393 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 292 ccagt-gggtagtgaaatagaacgtgaaaccgt 323 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 123 bits (62), Expect = 6e-25 Identities = 138/163 (84%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 421 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 480 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagctt 523 ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagctt 872 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 197 agcaaacgcgattcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 105 bits (53), Expect = 1e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgg 564 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 401 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 105 bits (53), Expect = 1e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgg 564 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 401 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgg 577 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgg 577 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 105 bits (53), Expect = 1e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgg 564 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 401 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgg 577 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgg 577 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 172 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 231 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 232 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 291 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 292 ccagtgggtagtgaaatagaacgtgaaaccgtg 324 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 433 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 492 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 493 gggtgatctatccatgaccaggatgaagcttgg 525 |||||||||| ||||| |||||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgg 577 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 291 c 291 | Sbjct: 485 c 485 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| |||||||||||||||| |||| |||||||||||| Sbjct: 193 agcaaacgcgattcccccagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 437 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 496 ||||||||||||| ||||| | ||||| ||||| | ||||||||||||||| | || Sbjct: 625 ccgtagcgaaagcaagtctgacaagggcccatgtcatcgtttatggacccgaacccgagt 684 Query: 497 gatctatccatgaccaggatgaagctt 523 |||||| ||||| ||||| |||||||| Sbjct: 685 gatctaaccatggccagggtgaagctt 711 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 94 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 143 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 291 c 291 | Sbjct: 498 c 498 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 401 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 605 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| |||||||||||||||| |||| |||||||||||| Sbjct: 206 agcaaacgcgattcccccagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 477 ttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 523 ||||||||||||||| | |||||||| ||||| ||||| |||||||| Sbjct: 678 ttatggacccgaacccgagtgatctaaccatggccagggtgaagctt 724 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 94 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 143 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 171 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 230 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 231 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 290 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 291 c 291 | Sbjct: 5072 c 5072 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 360 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 408 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5138 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 5186 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 53 |||||| ||||||||| |||||||||||||||| |||| |||||||||||| Sbjct: 4780 agcaaacgcgattcccccagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 437 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 496 ||||||||||||| ||||| | ||||| ||||| | ||||||||||||||| | || Sbjct: 5212 ccgtagcgaaagcaagtctgacaagggcccatgtcatcgtttatggacccgaacccgagt 5271 Query: 497 gatctatccatgaccaggatgaagctt 523 |||||| ||||| ||||| |||||||| Sbjct: 5272 gatctaaccatggccagggtgaagctt 5298 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 94 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 143 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,908,945 Number of Sequences: 3902068 Number of extensions: 2908945 Number of successful extensions: 88493 Number of sequences better than 10.0: 25955 Number of HSP's better than 10.0 without gapping: 25795 Number of HSP's successfully gapped in prelim test: 191 Number of HSP's that attempted gapping in prelim test: 45624 Number of HSP's gapped (non-prelim): 41300 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
