ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3e11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1142 bits (576), Expect = 0.0 Identities = 588/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119917 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119858 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119857 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119798 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119797 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119738 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119737 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119678 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119677 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119618 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119617 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119558 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119557 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119498 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119497 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119438 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119437 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 119378 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119377 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119328 Score = 1142 bits (576), Expect = 0.0 Identities = 588/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94977 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 95036 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95037 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95096 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95097 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95156 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95157 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95216 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95217 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95276 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95277 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95336 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95337 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95396 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95397 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95456 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95457 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 95516 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95517 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95566
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118698 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 118639 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118638 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 118579 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118578 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 118519 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118518 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 118459 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118458 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 118399 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118398 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 118339 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118338 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 118279 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118278 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 118219 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118218 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 118159 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118158 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 118109
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119782 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119723 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119722 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119663 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119662 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119603 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119602 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119543 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119542 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119483 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119423 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119363 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119362 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119303 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119302 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119243 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119242 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95374 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 95433 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95434 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95493 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95494 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95553 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95554 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95613 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95614 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95673 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95674 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95733 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95793 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95794 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95853 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95854 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95913 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119782 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119723 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119722 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119663 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119662 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119603 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119602 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119543 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119542 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119483 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119423 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119363 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119362 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119303 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119302 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119243 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119242 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95374 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 95433 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95434 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95493 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95494 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95553 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95554 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95613 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95614 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95673 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95674 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95733 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95793 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95794 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95853 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95854 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95913 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119731 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119672 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119671 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119612 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119611 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119552 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119551 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119492 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119491 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119432 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119431 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119372 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119371 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119312 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119311 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119252 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119251 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119192 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119191 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119142 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95319 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 95378 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95379 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95438 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95439 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95498 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95499 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95558 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95559 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95618 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95619 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95678 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95679 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95738 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95739 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95798 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95799 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95858 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95859 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95908
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507952 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 31508011 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508012 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 31508071 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508072 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 31508131 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31508132 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 31508191 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508192 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 31508251 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508252 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 31508311 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508312 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 31508371 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508372 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 31508431 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 31508432 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 31508491 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508492 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 31508541
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84644 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 84585 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84584 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 84525 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84524 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 84465 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 84464 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 84405 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84404 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 84345 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84344 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 84285 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84284 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 84225 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84224 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 84165 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 84164 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 84105 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84104 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 84055
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119751 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119692 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119632 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119572 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119571 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119512 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119511 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119452 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119392 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119332 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119272 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119271 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119212 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119162 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95367 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 95426 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95427 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95486 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95487 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95546 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95547 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95606 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95607 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95666 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95667 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95726 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95727 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95786 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95787 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95846 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95847 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95906 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95907 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95956
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58470 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 58411 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58410 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 58351 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58350 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 58291 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 58290 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 58231 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58230 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 58171 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58170 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 58111 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58110 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 58051 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58050 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 57991 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 57990 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 57931 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57930 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 57881
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268301 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 9268360 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268361 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9268420 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268421 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9268480 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9268481 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9268540 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268541 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9268600 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268601 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9268660 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268661 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9268720 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268721 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9268780 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9268781 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9268840 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268841 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 9268890 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227801 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 9227860 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227861 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9227920 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227921 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9227980 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9227981 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9228040 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228041 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9228100 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228101 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9228160 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228161 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9228220 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228221 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9228280 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9228281 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9228340 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228341 gaa-cctaggtgatctatccatgaccaggatgaagcttggatgaaactaag 9228390 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056215 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 9056274 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056275 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9056334 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056335 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9056394 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9056395 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9056454 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056455 gcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9056514 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056515 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9056574 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056575 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9056634 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056635 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9056694 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9056695 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9056754 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056755 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 9056804 Score = 1120 bits (565), Expect = 0.0 Identities = 585/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164390 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 9164449 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164450 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9164509 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164510 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9164569 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9164570 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9164629 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164630 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9164689 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164690 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9164749 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164750 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9164809 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164810 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9164869 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9164870 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9164929 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164930 gaa--ctaggtgatctatccatgaccaggatgaagcttggatgaaactaag 9164978 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 298 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 357 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 358 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938286 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 19938345 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938346 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 19938405 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938406 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 19938465 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19938466 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 19938525 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938526 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 19938585 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938586 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 19938645 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938646 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 19938705 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938706 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 19938765 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19938766 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 19938825 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938826 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 19938875 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277145 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 10277086 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277085 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10277026 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277025 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10276966 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10276965 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10276906 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276905 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10276846 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276845 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 10276786 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276785 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10276726 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276725 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10276666 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10276665 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10276606 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276605 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10276556 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387153 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 10387212 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10387272 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387273 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10387332 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10387333 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10387392 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387393 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10387452 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10387453 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 10387512 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387513 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10387572 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387573 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10387632 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10387633 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10387692 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387693 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10387742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 316 agtaccgtgagggaaaggtgaaaagaacccc 346 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 ttgtgctgctaggcgaagcggttgagtgc 169 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598468 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 31598527 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598528 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 31598587 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598588 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 31598647 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31598648 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 31598707 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598708 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 31598767 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598768 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 31598827 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598828 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 31598887 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598888 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 31598947 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 31598948 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 31599007 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599008 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 31599057
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525784 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 33525843 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525844 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 33525903 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525904 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 33525963 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 33525964 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 33526023 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526024 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 33526083 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526084 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 33526143 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526144 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 33526203 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526204 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 33526263 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33526264 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 33526323 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526324 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 33526373 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 320 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 379 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 380 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 439 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 440 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 334 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 393 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 394 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 443 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 327 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 365 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47757 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 47698 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47697 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 47638 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47637 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 47578 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 47577 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 47518 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47517 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 47458 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47457 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 47398 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47397 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 47338 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47337 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 47278 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 47277 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 47218 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47217 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 47168
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70981 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 71040 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71041 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 71100 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71101 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 71160 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 71161 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 71220 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71221 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 71280 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71281 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 71340 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71341 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 71400 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71401 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 71460 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 71461 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 71520 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71521 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 71570 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 212 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 272 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 332 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 333 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 392 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 452 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 512 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 572 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 632 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 633 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 692 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 742
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 179 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 239 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 240 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 299 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 359 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 419 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 479 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 539 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 540 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 599 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 649
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949562 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 19949621 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949622 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 19949681 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949682 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 19949741 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19949742 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 19949801 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949802 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 19949861 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949862 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 19949921 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949922 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 19949981 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949982 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 19950041 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19950042 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 19950101 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950102 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 19950151 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283184 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 10283125 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283124 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10283065 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283064 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10283005 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10283004 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10282945 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282944 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10282885 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282884 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 10282825 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282824 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10282765 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282764 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10282705 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10282704 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10282645 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282644 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10282595 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393192 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 10393251 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393252 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10393311 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393312 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10393371 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10393372 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10393431 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393432 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10393491 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10393492 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 10393551 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393552 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10393611 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393612 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10393671 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10393672 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10393731 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393732 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 10393781 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 ttgtgctgctaggcgaagcggttgagtgc 169 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119725 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119666 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119665 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119606 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119605 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119546 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119545 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119486 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119485 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119426 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119425 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119366 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119365 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119306 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119305 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119246 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119245 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119186 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119185 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 119136 Score = 1134 bits (572), Expect = 0.0 Identities = 587/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95314 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 95373 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95374 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95433 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95434 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95493 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95494 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95553 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95554 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95613 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95614 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95673 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95674 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95733 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95793 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95794 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95853 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95854 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 95903
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 769 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 709 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 649 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 648 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 589 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 529 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 469 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 409 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 408 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 349 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 348 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 289 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 239
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14141 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 14200 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14201 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 14260 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14261 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 14320 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 14321 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 14380 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14381 gcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 14440 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14441 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 14500 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14501 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 14560 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14561 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 14620 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14621 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 14680 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14681 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 14730 Score = 1120 bits (565), Expect = 0.0 Identities = 585/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122416 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 122475 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122476 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 122535 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122536 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 122595 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122596 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 122655 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122656 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 122715 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122716 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 122775 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122776 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 122835 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122836 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 122895 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122896 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 122955 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122956 gaa--ctaggtgatctatccatgaccaggatgaagcttggatgaaactaag 123004
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140949 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 141008 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141009 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 141068 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141069 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 141128 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 141129 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 141188 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141189 gcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 141248 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141249 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 141308 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141309 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 141368 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141369 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 141428 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141429 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 141488 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141489 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 141538
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93545 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 93604 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93605 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 93664 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93665 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 93724 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 93725 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 93784 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93785 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 93844 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 93845 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 93904 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93905 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 93964 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93965 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 94024 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 94025 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 94084 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94085 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 94134
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20376 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 20435 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20436 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 20495 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20496 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 20555 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 20556 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 20615 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20616 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 20675 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20676 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 20735 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20736 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 20795 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 20796 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 20855 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 20856 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 20915 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20916 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 20965 Score = 1110 bits (560), Expect = 0.0 Identities = 584/591 (98%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44742 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 44683 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44682 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 44623 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44622 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 44563 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 44562 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 44503 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44502 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 44443 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44442 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 44383 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44382 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 44323 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 44322 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 44263 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 44262 ccctccggagccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 44203 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44202 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 44153
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1371 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 1312 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 1252 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 1192 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1191 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 1132 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 1072 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 1012 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 952 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 951 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 892 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 891 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 832 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 782
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27609 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 27668 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27669 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 27728 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27729 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 27788 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27789 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 27848 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27849 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 27908 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 27909 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 27968 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27969 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 28028 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28029 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 28088 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28089 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 28148 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28149 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 28198
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123581 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 123522 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123521 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 123462 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123461 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 123402 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123401 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 123342 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123341 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 123282 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123281 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 123222 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123221 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 123162 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123161 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 123102 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123101 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 123042 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123041 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122992 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99256 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 99315 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99316 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 99375 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99376 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 99435 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99436 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 99495 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99496 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 99555 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99556 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 99615 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99616 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 99675 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 99676 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 99735 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 99736 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 99795 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99796 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 99845
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124298 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 124239 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124238 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 124179 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124178 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 124119 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 124118 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 124059 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124058 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 123999 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123998 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 123939 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123938 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 123879 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123878 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 123819 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123818 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 123759 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123758 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 123709 Score = 1126 bits (568), Expect = 0.0 Identities = 586/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99933 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 99992 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99993 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 100052 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100053 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 100112 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100113 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 100172 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100173 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 100232 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100233 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 100292 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100293 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 100352 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 100353 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 100412 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100413 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 100472 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100473 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 100522
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1118 bits (564), Expect = 0.0 Identities = 585/591 (98%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241980 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 9241921 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241920 agcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9241861 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241860 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9241801 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9241800 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9241741 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241740 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9241681 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241680 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9241621 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241620 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9241561 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241560 cgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaa 9241501 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9241500 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9241441 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241440 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 9241391 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 23 actgaaacatcttagtagccagaggaaaagaaag 56 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1118 bits (564), Expect = 0.0 Identities = 585/591 (98%), Gaps = 1/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53193 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 53134 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 53133 agcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 53074 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53073 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 53014 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 53013 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 52954 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52953 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 52894 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52893 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 52834 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52833 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 52774 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52773 cgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaa 52714 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52713 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 52654 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52653 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 52604
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1092 bits (551), Expect = 0.0 Identities = 569/574 (99%), Gaps = 1/574 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 115 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 175 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 235 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 236 tggctaaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggg 295 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 355 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 415 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 475 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 535 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 536 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 595 Query: 541 gaaccctgggtgatctatccatgaccaggatgaa 574 ||| |||||||||||||||||||||||||||||| Sbjct: 596 gaa-cctgggtgatctatccatgaccaggatgaa 628
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123520 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 123461 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123460 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 123401 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123400 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 123341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 123340 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 123282 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123281 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 123222 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123221 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 123162 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123161 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 123102 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123101 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 123042 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123041 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 122982 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122981 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122932 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99217 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 99276 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99277 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 99336 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99337 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 99396 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 99397 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 99455 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99456 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 99515 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99516 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 99575 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99576 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 99635 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 99636 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 99695 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 99696 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 99755 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99756 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 99805
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5570 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 5629 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5630 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 5689 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5690 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 5749 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 5750 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 5808 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5809 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 5868 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5869 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 5928 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5929 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 5988 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5989 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 6048 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6049 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 6108 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6109 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 6158
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 217 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 277 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 337 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 338 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 396 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 456 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 516 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 576 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 577 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 636 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 637 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 696 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 746
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1039 bits (524), Expect = 0.0 Identities = 537/540 (99%), Gaps = 1/540 (0%) Strand = Plus / Plus Query: 52 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 112 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 172 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 231 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 232 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 292 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 352 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 421 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 480 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 539
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1035 bits (522), Expect = 0.0 Identities = 535/538 (99%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 54 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 113 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 114 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 174 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 233 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 234 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 294 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 354 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 474 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 533 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 534 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1035 bits (522), Expect = 0.0 Identities = 535/538 (99%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 54 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 113 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 114 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 174 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 233 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 234 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 294 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 354 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 474 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 533 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 534 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1033 bits (521), Expect = 0.0 Identities = 534/537 (99%), Gaps = 1/537 (0%) Strand = Plus / Plus Query: 55 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 115 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 175 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 234 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 235 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 295 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 355 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 475 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 534 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 483 Query: 535 ggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 539
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1029 bits (519), Expect = 0.0 Identities = 532/535 (99%), Gaps = 1/535 (0%) Strand = Plus / Plus Query: 57 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 117 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 177 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 236 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 237 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 297 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 357 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 417 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 477 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 536 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 480 Query: 537 acccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 acccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 534
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1025 bits (517), Expect = 0.0 Identities = 530/533 (99%), Gaps = 1/533 (0%) Strand = Plus / Plus Query: 55 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 115 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 175 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 234 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 235 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 295 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 355 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 475 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 534 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 480 Query: 535 ggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 587 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaac 532
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 948 bits (478), Expect = 0.0 Identities = 564/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134069 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 134010 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134009 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 133950 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 133949 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctaga 133890 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133889 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 133830 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133829 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 133770 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 133769 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 133710 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||||| Sbjct: 133709 atagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccg 133653 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133652 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 133598 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133597 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 133538 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133537 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 133488 Score = 948 bits (478), Expect = 0.0 Identities = 564/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103902 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 103961 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103962 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104021 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 104022 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctaga 104081 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104082 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 104141 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104142 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104201 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 104202 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 104261 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||||| Sbjct: 104262 atagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccg 104318 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104319 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104373 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104374 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 104433 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104434 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104483
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 932 bits (470), Expect = 0.0 Identities = 562/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139432 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 139373 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139372 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 139313 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||| Sbjct: 139312 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctaga 139253 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 139252 tggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagcatggg 139193 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139192 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 139133 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 139132 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 139073 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 139072 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 139016 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139015 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 138961 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 138960 cccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 138901 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138900 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138851 Score = 932 bits (470), Expect = 0.0 Identities = 562/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110513 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 110572 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110573 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 110632 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||| Sbjct: 110633 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctaga 110692 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 110693 tggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagcatggg 110752 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110753 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 110812 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 110813 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 110872 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 110873 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 110929 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110930 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 110984 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 110985 cccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 111044 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111045 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 111094
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 932 bits (470), Expect = 0.0 Identities = 562/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141954 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 141895 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141894 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 141835 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| Sbjct: 141834 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctaga 141775 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 141774 tggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggg 141715 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 141714 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggt 141655 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 141654 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 141595 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 141594 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 141538 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 141537 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 141483 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 141482 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 141423 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141422 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 141373 Score = 932 bits (470), Expect = 0.0 Identities = 562/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111703 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 111762 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111763 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 111822 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| Sbjct: 111823 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctaga 111882 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 111883 tggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggg 111942 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 111943 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggt 112002 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 112003 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 112062 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 112063 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 112119 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 112120 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 112174 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 112175 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 112234 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112235 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 112284
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 932 bits (470), Expect = 0.0 Identities = 475/477 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 209 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 269 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 329 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 330 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 389 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 449 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 509 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 569 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 626
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 932 bits (470), Expect = 0.0 Identities = 562/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127710 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 127651 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127650 agcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 127591 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| Sbjct: 127590 gtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctaga 127531 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 127530 tggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagcatggg 127471 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127470 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 127411 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 127410 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 127351 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 127350 atagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgaccg 127294 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127293 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaat---- 127238 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127237 -ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 127179 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127178 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 127129 Score = 932 bits (470), Expect = 0.0 Identities = 562/591 (95%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107212 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 107271 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107272 agcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 107331 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| Sbjct: 107332 gtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctaga 107391 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 107392 tggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagcatggg 107451 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107452 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 107511 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 107512 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 107571 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 107572 atagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgaccg 107628 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107629 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaat---- 107684 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107685 -ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 107743 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107744 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107793
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 922 bits (465), Expect = 0.0 Identities = 561/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134827 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 134768 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134767 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 134708 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 134707 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctaga 134648 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 134647 tggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagcatggg 134588 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134587 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 134528 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 134527 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 134468 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 134467 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccg 134415 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 134414 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 134360 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134359 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 134300 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134299 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134250 Score = 922 bits (465), Expect = 0.0 Identities = 561/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105455 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 105514 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105515 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105574 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 105575 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctaga 105634 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 105635 tggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagcatggg 105694 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105695 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 105754 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 105755 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 105814 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 105815 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccg 105867 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105868 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 105922 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 105923 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 105982 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105983 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106032
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 914 bits (461), Expect = 0.0 Identities = 472/476 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 169 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 229 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gtgggagagcagtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 289 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 290 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 349 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 409 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 469 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 470 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccg 529 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 914 bits (461), Expect = 0.0 Identities = 466/468 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 82 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 142 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 202 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 203 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 262 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 322 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 382 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 442 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 468 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 490
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 910 bits (459), Expect = 0.0 Identities = 511/528 (96%), Gaps = 14/528 (2%) Strand = Plus / Minus Query: 69 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 129 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 189 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 248 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 249 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 75007 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75006 -cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 74960 Score = 139 bits (70), Expect = 1e-29 Identities = 72/73 (98%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75557 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 75498 Query: 61 agcgattcccgta 73 ||||||||||||| Sbjct: 75497 agcgattcccgta 75485 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860 Score = 63.9 bits (32), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagta 39 ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 430380 caggcaagagacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 910 bits (459), Expect = 0.0 Identities = 511/528 (96%), Gaps = 14/528 (2%) Strand = Plus / Plus Query: 69 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 129 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 189 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 248 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 249 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 382531 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382532 -cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 382578 Score = 139 bits (70), Expect = 1e-29 Identities = 72/73 (98%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381981 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 382040 Query: 61 agcgattcccgta 73 ||||||||||||| Sbjct: 382041 agcgattcccgta 382053 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867 Score = 63.9 bits (32), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagta 39 ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 254043 caggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 63.9 bits (32), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagta 39 ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 125351 caggcaagagacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 910 bits (459), Expect = 0.0 Identities = 511/528 (96%), Gaps = 14/528 (2%) Strand = Plus / Minus Query: 69 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 129 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 189 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 248 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 249 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 113098 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113097 -cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 113051 Score = 139 bits (70), Expect = 1e-29 Identities = 72/73 (98%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113648 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 113589 Query: 61 agcgattcccgta 73 ||||||||||||| Sbjct: 113588 agcgattcccgta 113576 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494 Score = 63.9 bits (32), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagta 39 ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 323067 caggcaagagacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 910 bits (459), Expect = 0.0 Identities = 511/528 (96%), Gaps = 14/528 (2%) Strand = Plus / Minus Query: 69 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 129 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 189 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 248 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 249 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 367780 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367779 -cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 367733 Score = 910 bits (459), Expect = 0.0 Identities = 511/528 (96%), Gaps = 14/528 (2%) Strand = Plus / Minus Query: 69 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 129 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 189 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 248 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 249 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 184385 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184384 -cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 184338 Score = 139 bits (70), Expect = 1e-29 Identities = 72/73 (98%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368330 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 368271 Query: 61 agcgattcccgta 73 ||||||||||||| Sbjct: 368270 agcgattcccgta 368258 Score = 139 bits (70), Expect = 1e-29 Identities = 72/73 (98%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184935 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 184876 Query: 61 agcgattcccgta 73 ||||||||||||| Sbjct: 184875 agcgattcccgta 184863 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 346 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329 Score = 63.9 bits (32), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagta 39 ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 295896 caggcaagagacaacctagcgaactgaaacatcttagta 295858
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 910 bits (459), Expect = 0.0 Identities = 560/591 (94%), Gaps = 11/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136437 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 136378 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136318 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 136317 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 136258 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 136257 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 136198 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136197 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 136138 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 136137 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 136078 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | || | ||||||||| Sbjct: 136077 atagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccg 136023 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 136022 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 135968 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 135967 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 135908 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135907 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135858 Score = 910 bits (459), Expect = 0.0 Identities = 560/591 (94%), Gaps = 11/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105988 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 106047 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106107 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 106108 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 106167 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106168 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 106227 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106228 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 106287 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 106288 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 106347 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | || | ||||||||| Sbjct: 106348 atagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccg 106402 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106403 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 106457 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106458 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 106517 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106518 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106567
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 900 bits (454), Expect = 0.0 Identities = 559/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132621 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 132562 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132561 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 132502 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 132501 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 132442 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132441 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 132382 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132381 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 132322 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 132321 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 132262 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 132261 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 132206 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132205 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 132151 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 132150 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 132091 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132090 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132041 Score = 900 bits (454), Expect = 0.0 Identities = 559/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104257 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 104316 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104317 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104376 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 104377 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 104436 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104437 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 104496 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104497 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104556 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 104557 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 104616 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 104617 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 104672 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104673 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104727 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104728 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 104787 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104788 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104837
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 900 bits (454), Expect = 0.0 Identities = 559/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132844 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 132785 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132784 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 132725 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 132724 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 132665 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132664 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 132605 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132604 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 132545 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 132544 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 132485 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 132484 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 132429 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132428 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 132374 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 132373 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 132314 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132313 gaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 132264 Score = 900 bits (454), Expect = 0.0 Identities = 559/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103920 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 103979 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103980 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104039 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 104040 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 104099 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104100 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 104159 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104160 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104219 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 104220 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 104279 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 104280 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 104335 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104336 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104390 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104391 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 104450 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104451 gaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 104500
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 900 bits (454), Expect = 0.0 Identities = 559/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132614 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 132555 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132554 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 132495 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 132494 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 132435 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132434 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 132375 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132374 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 132315 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 132314 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 132255 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 132254 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 132199 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132198 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 132144 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 132143 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 132084 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132083 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132034 Score = 900 bits (454), Expect = 0.0 Identities = 559/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104255 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 104314 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104315 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104374 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 104375 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 104434 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104435 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 104494 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104495 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104554 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 104555 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 104614 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 104615 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 104670 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104671 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104725 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104726 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 104785 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104786 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104835
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 892 bits (450), Expect = 0.0 Identities = 558/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131513 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 131454 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131453 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 131394 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 131393 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 131334 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131333 tggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 131274 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131273 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 131214 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 131213 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 131154 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 131153 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 131098 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131097 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 131043 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 131042 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 130983 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130982 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 130933 Score = 892 bits (450), Expect = 0.0 Identities = 558/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103122 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 103181 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103182 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 103241 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 103242 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 103301 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103302 tggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 103361 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103362 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 103421 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 103422 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 103481 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 103482 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 103537 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103538 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 103592 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 103593 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 103652 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103653 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 103702
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 892 bits (450), Expect = 0.0 Identities = 558/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133805 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 133746 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133745 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 133686 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 133685 gtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 133626 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133625 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 133566 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133565 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 133506 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 133505 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 133446 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 133445 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 133390 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133389 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 133335 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 133334 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 133275 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133274 gaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 133225 Score = 892 bits (450), Expect = 0.0 Identities = 558/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104844 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 104903 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104904 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104963 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 104964 gtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 105023 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105024 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 105083 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105084 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 105143 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 105144 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 105203 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 105204 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 105259 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105260 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 105314 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 105315 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 105374 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105375 gaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 105424
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136146 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 136087 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136086 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136027 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 136026 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 135967 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135966 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 135907 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135906 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135847 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135846 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135787 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135786 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135732 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135731 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135677 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135676 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135617 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135616 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135566 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106484 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 106543 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106544 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106603 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 106604 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 106663 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106664 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 106723 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106724 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106783 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106784 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106843 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106844 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106898 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106899 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106953 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106954 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107013 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107014 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107064
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136784 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 136725 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136724 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136665 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 136664 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 136605 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136604 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 136545 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136544 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 136485 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 136484 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 136425 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 136424 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 136370 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136369 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 136315 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 136314 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 136255 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136254 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 136204 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106773 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 106832 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106833 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106892 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 106893 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 106952 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106953 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 107012 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107013 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 107072 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 107073 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 107132 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 107133 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 107187 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107188 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 107242 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107243 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107302 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107303 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107353
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1678 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 1737 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1738 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 1797 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 1798 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 1857 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1858 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 1917 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1918 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 1977 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 1978 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 2037 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 2038 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 2092 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2093 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 2147 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2148 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 2207 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2208 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2258
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135392 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135333 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135332 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135273 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135272 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135213 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135212 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135153 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135152 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135093 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135092 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135033 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135032 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 134978 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134977 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 134923 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134922 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134863 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134862 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134812 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105644 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 105703 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105704 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105763 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105764 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105823 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105824 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 105883 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105884 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105943 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105944 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106003 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106004 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106058 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106059 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106113 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106114 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106173 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106174 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106224
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135527 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135468 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135467 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135408 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135407 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135348 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135347 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135288 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135287 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135228 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135227 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135168 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135167 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135113 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135112 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135058 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135057 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134998 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134997 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134947 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105816 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 105875 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105876 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105935 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105936 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105995 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105996 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 106055 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106056 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106115 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106116 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106175 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106176 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106230 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106231 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106285 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106286 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106345 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106346 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106396
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135525 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135466 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135465 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135406 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135405 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135346 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135345 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135286 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135285 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135226 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135225 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135166 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135165 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135111 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135110 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135056 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135055 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134996 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134995 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134945 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105813 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 105872 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105873 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105932 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105933 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105992 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105993 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 106052 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106053 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106112 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106113 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106172 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106173 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106227 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106228 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106282 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106283 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106342 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106343 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106393
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135437 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135378 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135377 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135318 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135317 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135258 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135257 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135198 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135197 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135138 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135137 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135078 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135077 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135023 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135022 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 134968 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134967 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134908 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134907 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134857 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105691 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 105750 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105751 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105810 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105811 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105870 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105871 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 105930 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105931 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105990 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105991 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106050 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106051 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106105 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106106 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106160 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106161 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106220 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106221 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106271
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136144 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 136085 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136084 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136025 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 136024 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 135965 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135964 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 135905 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135904 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135845 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135844 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135785 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135784 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135730 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135729 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135675 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135674 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135615 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135614 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135564 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106482 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 106541 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106542 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106601 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 106602 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 106661 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106662 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 106721 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106722 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106781 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106782 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106841 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106842 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106896 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106897 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106951 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106952 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107011 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107012 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107062
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135875 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135816 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135815 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135756 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 135755 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 135696 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135695 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 135636 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135635 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135576 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135575 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135516 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135515 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135461 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135460 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135406 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135405 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135346 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135345 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135295 Score = 888 bits (448), Expect = 0.0 Identities = 559/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106263 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 106322 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106323 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106382 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 106383 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 106442 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106443 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 106502 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106503 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106562 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106563 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106622 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106623 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106677 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106678 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106732 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106733 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106792 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106793 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106843
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 884 bits (446), Expect = 0.0 Identities = 557/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140206 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 140147 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140146 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 140087 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| Sbjct: 140086 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctaga 140027 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 140026 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 139967 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139966 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 139907 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 139906 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 139847 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | || ||||||||||||||||| | | | | ||||||||| Sbjct: 139846 atagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccg 139791 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139790 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 139736 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 139735 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 139676 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139675 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 139626 Score = 884 bits (446), Expect = 0.0 Identities = 557/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109854 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 109913 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109914 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 109973 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| Sbjct: 109974 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctaga 110033 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110034 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 110093 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110094 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 110153 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 110154 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 110213 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | || ||||||||||||||||| | | | | ||||||||| Sbjct: 110214 atagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccg 110269 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110270 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 110324 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 110325 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 110384 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110385 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110434
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 884 bits (446), Expect = 0.0 Identities = 557/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131637 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 131578 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131577 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 131518 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 131517 gtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctaga 131458 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131457 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 131398 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131397 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 131338 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 131337 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 131278 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | ||||| |||||||||||||||| | || | ||||||| Sbjct: 131277 atagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccg 131222 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131221 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 131167 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 131166 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 131107 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131106 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 131057 Score = 884 bits (446), Expect = 0.0 Identities = 557/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101808 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 101867 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101868 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 101927 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 101928 gtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctaga 101987 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101988 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 102047 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102048 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 102107 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 102108 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 102167 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | ||||| |||||||||||||||| | || | ||||||| Sbjct: 102168 atagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccg 102223 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 102224 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 102278 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 102279 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 102338 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102339 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 102388
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 884 bits (446), Expect = 0.0 Identities = 557/591 (94%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 212 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 272 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 273 gtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 332 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 333 tggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagtagcatggg 392 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 452 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 453 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 512 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 513 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 568 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 569 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 623 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 624 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 683 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 684 gaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 733
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 880 bits (444), Expect = 0.0 Identities = 558/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135404 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135345 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135344 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135285 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135284 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135225 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135224 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135165 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135164 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135105 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135104 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135045 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135044 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 134990 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 134989 gcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag-----gga 134935 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134934 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134875 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134874 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134824 Score = 880 bits (444), Expect = 0.0 Identities = 558/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105658 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 105717 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105718 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105777 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105778 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105837 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105838 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 105897 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105898 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105957 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105958 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106017 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106018 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106072 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 106073 gcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag-----gga 106127 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106128 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106187 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106188 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106238
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 868 bits (438), Expect = 0.0 Identities = 555/591 (93%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106159 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 106218 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106219 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106278 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||| Sbjct: 106279 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctaga 106338 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106339 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 106398 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106399 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 106458 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 106459 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 106518 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||||| Sbjct: 106519 atagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccg 106574 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106575 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 106629 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 106630 cccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggaccc 106689 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106690 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106739 Score = 819 bits (413), Expect = 0.0 Identities = 554/594 (93%), Gaps = 13/594 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135750 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135691 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135690 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135631 Query: 121 gtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 179 |||||||||| ||||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 135630 gtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctag 135571 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatg-ctctgacccgagtagcatg 238 ||||| | |||||||||||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 135570 atggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagtagcatg 135511 Query: 239 gggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcctg 297 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135510 gggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctg 135451 Query: 298 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 357 |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135450 ggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135391 Query: 358 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 417 |||||||||| |||||||| | |||| ||||||||||||||| | | | | |||||| Sbjct: 135390 gaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctga 135335 Query: 418 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135334 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 135280 Query: 478 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 537 ||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| Sbjct: 135279 gaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatgga 135220 Query: 538 cccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135219 cccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135167
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 868 bits (438), Expect = 0.0 Identities = 555/591 (93%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 577 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 578 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 632 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 633 cccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggaccc 692 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 693 gaa-cctgggtgatctatccatgaccaggatggagcttgggtgaaactaag 742
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 868 bits (438), Expect = 0.0 Identities = 555/591 (93%), Gaps = 10/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136026 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 135967 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135966 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135907 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||| Sbjct: 135906 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctaga 135847 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135846 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 135787 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135786 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 135727 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 135726 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 135667 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||||| Sbjct: 135666 atagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccg 135611 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135610 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 135556 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 135555 cccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggaccc 135496 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135495 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135446 Score = 868 bits (438), Expect = 0.0 Identities = 555/591 (93%), Gaps = 10/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106381 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 106440 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106441 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106500 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||| Sbjct: 106501 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctaga 106560 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106561 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 106620 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106621 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 106680 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 106681 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 106740 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||||| Sbjct: 106741 atagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccg 106796 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106797 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 106851 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 106852 cccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggaccc 106911 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106912 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106961
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 864 bits (436), Expect = 0.0 Identities = 557/592 (94%), Gaps = 13/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 188 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 248 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||||| | Sbjct: 249 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-at 307 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 308 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 367 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 427 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 428 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 487 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 488 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 542 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 543 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 597 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 598 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 657 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 658 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 708
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 862 bits (435), Expect = 0.0 Identities = 556/592 (93%), Gaps = 11/592 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 caggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaa 213 Query: 61 agcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 119 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 agcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 273 Query: 120 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 179 |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| Sbjct: 274 tgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctag 333 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 334 atggctagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 393 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 453 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 454 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggggagtga 513 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | | | |||||||| Sbjct: 514 aatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-gggctctgacc 569 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 570 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 624 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 625 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 684 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 685 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 858 bits (433), Expect = 0.0 Identities = 555/592 (93%), Gaps = 13/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 709 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 769 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 770 gtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctaga 829 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 830 tggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 889 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 949 Query: 301 gaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| ||||| Sbjct: 950 gaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtga 1009 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | ||||| |||||||||||||| || || |||||||| Sbjct: 1010 aatagaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctctgacc 1063 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1064 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 1118 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1119 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 1178 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1179 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 1229
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 856 bits (432), Expect = 0.0 Identities = 552/588 (93%), Gaps = 12/588 (2%) Strand = Plus / Minus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139346 caagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcg 139287 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139286 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 139227 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 |||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139226 gagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggc 139167 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 139166 gatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcac 139107 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139106 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 139047 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 139046 gatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatag 138987 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgt 423 ||| |||||||| | |||||||||||||||||||| | || | |||||||||||| Sbjct: 138986 aacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgt 138932 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 138931 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaccc 138877 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 138876 accggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa 138817 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138816 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138770 Score = 856 bits (432), Expect = 0.0 Identities = 552/588 (93%), Gaps = 12/588 (2%) Strand = Plus / Plus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 109751 caagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcg 109810 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109811 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 109870 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 |||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| Sbjct: 109871 gagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggc 109930 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 109931 gatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcac 109990 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109991 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 110050 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 110051 gatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatag 110110 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgt 423 ||| |||||||| | |||||||||||||||||||| | || | |||||||||||| Sbjct: 110111 aacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgt 110165 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110166 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaaccc 110220 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 110221 accggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa 110280 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110281 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110327
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 856 bits (432), Expect = 0.0 Identities = 555/592 (93%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142725 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 142666 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142665 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 142606 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctag 179 ||||||||| |||||||||| ||||||||||||||||| | || ||||| ||||||||| Sbjct: 142605 gtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctag 142546 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 142545 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 142486 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 142485 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 142426 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 142425 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 142366 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | ||||||||||||||||||| | || | |||||||| Sbjct: 142365 aatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgacc 142311 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 142310 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 142256 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 142255 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 142196 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142195 cgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 142145 Score = 856 bits (432), Expect = 0.0 Identities = 555/592 (93%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110603 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 110662 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110663 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 110722 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctag 179 ||||||||| |||||||||| ||||||||||||||||| | || ||||| ||||||||| Sbjct: 110723 gtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctag 110782 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110783 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 110842 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 110843 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 110902 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 110903 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 110962 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | ||||||||||||||||||| | || | |||||||| Sbjct: 110963 aatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgacc 111017 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111018 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 111072 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 111073 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 111132 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111133 cgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 111183
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 852 bits (430), Expect = 0.0 Identities = 556/594 (93%), Gaps = 12/594 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139559 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 139500 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139499 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 139440 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| || || ||| ||||||||| Sbjct: 139439 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctag 139380 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139379 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 139320 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139319 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 139260 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 139259 tgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 139200 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctga 417 |||||||| |||||||| | |||||||||||||||||||| || | | |||||| Sbjct: 139199 aatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggactctga 139143 Query: 418 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139142 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 139088 Query: 478 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 537 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 139087 gaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 139028 Query: 538 cccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139027 cccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138975 Score = 852 bits (430), Expect = 0.0 Identities = 556/594 (93%), Gaps = 12/594 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109740 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 109799 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109800 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 109859 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| || || ||| ||||||||| Sbjct: 109860 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctag 109919 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 109920 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 109979 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109980 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 110039 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 110040 tgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 110099 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctga 417 |||||||| |||||||| | |||||||||||||||||||| || | | |||||| Sbjct: 110100 aatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggactctga 110156 Query: 418 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110157 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 110211 Query: 478 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 537 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 110212 gaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 110271 Query: 538 cccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110272 cccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110324
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 844 bits (426), Expect = 0.0 Identities = 557/594 (93%), Gaps = 14/594 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1920 caggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaaagaaagcaaa 1979 Query: 61 ag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 119 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1980 aggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 2039 Query: 120 tgtgggagagcaatacaagcgtt-gtgctgctaggcgaagcggtt-gagtgccgcaccct 177 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||| Sbjct: 2040 tgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccct 2099 Query: 178 agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 237 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2100 agatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 2159 Query: 238 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2160 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 2219 Query: 298 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 357 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 2220 ggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 2279 Query: 358 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 417 |||||||||| |||||||| | |||||||||||||||||||| | || | |||||| Sbjct: 2280 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctga 2334 Query: 418 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2335 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 2389 Query: 478 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 537 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 2390 gaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 2449 Query: 538 cccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2450 cccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2502
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 841 bits (424), Expect = 0.0 Identities = 551/591 (93%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||| ||| |||||||| | ||||| |||||||||||||| || || |||||| || Sbjct: 522 ataaaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctctgaacg 575 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 576 cgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag-----ggaa 630 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 631 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 690 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 691 gaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 740
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 837 bits (422), Expect = 0.0 Identities = 550/591 (93%), Gaps = 9/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 214 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 215 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 274 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 275 gtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcaccccaga 334 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 335 tggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtagcatggg 394 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 454 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 455 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 514 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||| Sbjct: 515 atagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccg 571 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 572 cgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggga 626 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 |||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||| Sbjct: 627 cccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggaccc 686 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 687 gaa-cctgggtgatctatccatgaccaggatgaagctcgggtgaaactaag 736
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 831 bits (419), Expect = 0.0 Identities = 550/591 (93%), Gaps = 11/591 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4385 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 4444 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4445 agcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggtt 4504 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||| ||||||||||||| | || || |||||||||| Sbjct: 4505 gtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctaga 4564 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4565 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 4624 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4625 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 4684 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 4685 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaa 4744 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 4745 atagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccg 4799 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4800 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 4854 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 4855 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 4914 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4915 gaa-cctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 4964
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 831 bits (419), Expect = 0.0 Identities = 550/591 (93%), Gaps = 11/591 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23540 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 23481 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 23480 agcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggtt 23421 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||| ||||||||||||| | || || |||||||||| Sbjct: 23420 gtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctaga 23361 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23360 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 23301 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 23241 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 23240 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaa 23181 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 23180 atagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccg 23126 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23125 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 23071 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 23070 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 23011 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23010 gaa-cctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 22961
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 831 bits (419), Expect = 0.0 Identities = 532/565 (94%), Gaps = 11/565 (1%) Strand = Plus / Minus Query: 28 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 86 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 87 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 146 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 147 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 206 |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385 Query: 207 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 266 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325 Query: 267 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 327 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 386 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208 Query: 387 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 446 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 447 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 506 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 148 actcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgag 94 Query: 507 tcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgacc 566 |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 93 tcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgacc 35 Query: 567 aggatgaagcttggatgaaactaag 591 |||||||||||||| |||||||||| Sbjct: 34 aggatgaagcttgggtgaaactaag 10
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 827 bits (417), Expect = 0.0 Identities = 551/593 (92%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86416 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaatagaaagcaaa 86475 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86476 agcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 86535 Query: 121 gtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 178 |||||||||| |||| |||| |||||||||||||||||||||||||| | |||||||| Sbjct: 86536 gtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgcacccta 86595 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 ||||| | |||||||||||||||||||||| | ||||| ||||| |||||||||||||| Sbjct: 86596 gatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagtagcatg 86655 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86656 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 86715 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 86716 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 86775 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 418 ||||||||| |||||||| | |||||||||||||||||||| || |||||||||| Sbjct: 86776 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgac 86832 Query: 419 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 478 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 86833 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaag-----gg 86887 Query: 479 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 538 ||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||| Sbjct: 86888 aacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggac 86947 Query: 539 ccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86948 ccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 86999
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 827 bits (417), Expect = 0.0 Identities = 551/593 (92%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 88502 caggcaagagacaacctggtgaactgaaacatcttagtagccagaggaatagaaagcaaa 88561 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88562 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 88621 Query: 121 gtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 178 ||||||||||| ||| |||| |||||||||||||||||||||||||| | |||||||| Sbjct: 88622 gtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgcacccta 88681 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 ||||| | |||||||||||||||||||||| | ||||| ||||| |||||||||||||| Sbjct: 88682 gatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagtagcatg 88741 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88742 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 88801 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 88802 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 88861 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 418 ||||||||| |||||||| | |||||||||||||||||||| || |||||||||| Sbjct: 88862 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgac 88918 Query: 419 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 478 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 88919 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaag-----gg 88973 Query: 479 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 538 ||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||| Sbjct: 88974 aacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggac 89033 Query: 539 ccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 89034 ccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 89085
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 823 bits (415), Expect = 0.0 Identities = 550/591 (93%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4654 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 4713 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4714 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 4773 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || || |||||||||| Sbjct: 4774 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctaga 4833 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4834 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatggg 4893 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4894 gcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 4953 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 4954 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaa 5013 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | ||||||||| |||||||||| | | | ||||||||| Sbjct: 5014 atagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccg 5067 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5068 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 5122 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 5123 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 5182 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5183 gaa-cctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 823 bits (415), Expect = 0.0 Identities = 550/591 (93%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4654 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 4713 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4714 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 4773 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || || |||||||||| Sbjct: 4774 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctaga 4833 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4834 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatggg 4893 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4894 gcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 4953 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 4954 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaa 5013 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 420 ||||||| |||||||| | ||||||||| |||||||||| | | | ||||||||| Sbjct: 5014 atagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccg 5067 Query: 421 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5068 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 5122 Query: 481 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 540 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 5123 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 5182 Query: 541 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||| ||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5183 gaa-cctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 821 bits (414), Expect = 0.0 Identities = 553/594 (93%), Gaps = 13/594 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131716 caggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaa 131657 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131656 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 131597 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 178 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 131596 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 131537 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131536 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 131477 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131476 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 131417 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 131416 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 131357 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctga 417 ||||||||| |||||||| | |||||||||||||||||||| || | || |||||| Sbjct: 131356 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctga 131301 Query: 418 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131300 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 131246 Query: 478 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 537 ||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 131245 gaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatgga 131186 Query: 538 cccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131185 cccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 131133 Score = 821 bits (414), Expect = 0.0 Identities = 553/594 (93%), Gaps = 13/594 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103678 caggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaa 103737 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103738 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 103797 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 178 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 103798 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 103857 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103858 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 103917 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103918 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 103977 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 103978 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 104037 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctga 417 ||||||||| |||||||| | |||||||||||||||||||| || | || |||||| Sbjct: 104038 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctga 104093 Query: 418 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104094 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 104148 Query: 478 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 537 ||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 104149 gaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatgga 104208 Query: 538 cccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104209 cccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104261
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 815 bits (411), Expect = 0.0 Identities = 553/593 (93%), Gaps = 17/593 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaa 59 ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 254 caggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaa 313 Query: 60 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 314 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-t 372 Query: 120 tgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgcacccta 178 |||||||||||||||||||||| |||||||||||||||| || || ||| |||||||| Sbjct: 373 tgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgcacccta 432 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 492 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 493 gggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgg 552 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 553 gtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtg 611 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 418 ||||||||| |||||||| | |||||||||||||||||||| | | ||||||| Sbjct: 612 aaatagaacatgaaaccg---taagctcccaagcagtgggaggcca----gggctctgac 664 Query: 419 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 665 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gg 719 Query: 479 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 538 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 720 aacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggac 779 Query: 539 ccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 780 ccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 831
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 787 bits (397), Expect = 0.0 Identities = 548/597 (91%), Gaps = 15/597 (2%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 128292 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaa 128233 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 128232 cgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggtt 128173 Query: 121 gtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 174 ||||| |||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 128172 gtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcac 128113 Query: 175 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 234 |||||||||| | |||||||||||||||||||||||||||| | ||||| |||| ||||| Sbjct: 128112 cctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaacccaagtag 128053 Query: 235 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128052 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 127993 Query: 295 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 354 |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| Sbjct: 127992 ctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccatagggg 127933 Query: 355 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 414 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 127932 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctc 127876 Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 127875 tgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag--- 127819 Query: 475 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 534 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| || Sbjct: 127818 --ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcat 127761 Query: 535 ggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 127760 ggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtaaaactaag 127705 Score = 787 bits (397), Expect = 0.0 Identities = 548/597 (91%), Gaps = 15/597 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95155 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaa 95214 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 95215 cgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggtt 95274 Query: 121 gtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 174 ||||| |||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 95275 gtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcac 95334 Query: 175 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 234 |||||||||| | |||||||||||||||||||||||||||| | ||||| |||| ||||| Sbjct: 95335 cctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaacccaagtag 95394 Query: 235 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95395 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 95454 Query: 295 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 354 |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| Sbjct: 95455 ctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccatagggg 95514 Query: 355 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 414 ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 95515 agtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctc 95571 Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 95572 tgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag--- 95628 Query: 475 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 534 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| || Sbjct: 95629 --ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcat 95686 Query: 535 ggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 95687 ggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtaaaactaag 95742
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 785 bits (396), Expect = 0.0 Identities = 543/588 (92%), Gaps = 12/588 (2%) Strand = Plus / Minus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52528 caagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 52469 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 52468 attcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgg 52409 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatgg 183 |||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||||||||| Sbjct: 52408 gagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatgg 52349 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || Sbjct: 52348 cgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggaca 52289 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 52288 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaac 52229 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 52228 cgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaata 52169 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| |||||||| | |||||||||||||||||||| | || | |||||||||||| Sbjct: 52168 gaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgt 52114 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 52113 gcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-----ggaaccc 52059 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| Sbjct: 52058 accggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaa 51999 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 51998 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 51952 Score = 785 bits (396), Expect = 0.0 Identities = 543/588 (92%), Gaps = 12/588 (2%) Strand = Plus / Plus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37300 caagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 37359 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 37360 attcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgg 37419 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatgg 183 |||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||||||||| Sbjct: 37420 gagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatgg 37479 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || Sbjct: 37480 cgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggaca 37539 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 37540 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaac 37599 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 37600 cgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaata 37659 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| |||||||| | |||||||||||||||||||| | || | |||||||||||| Sbjct: 37660 gaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgt 37714 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 37715 gcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-----ggaaccc 37769 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| Sbjct: 37770 accggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaa 37829 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37830 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 37876
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 785 bits (396), Expect = 0.0 Identities = 543/588 (92%), Gaps = 12/588 (2%) Strand = Plus / Plus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4228 caagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 4287 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4288 attcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgg 4347 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatgg 183 |||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||||||||| Sbjct: 4348 gagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatgg 4407 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || Sbjct: 4408 cgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggaca 4467 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4468 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaac 4527 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 4528 cgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaata 4587 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| |||||||| | |||||||||||||||||||| | || | |||||||||||| Sbjct: 4588 gaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgt 4642 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 4643 gcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-----ggaaccc 4697 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| Sbjct: 4698 accggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaa 4757 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4758 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 4804
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 781 bits (394), Expect = 0.0 Identities = 541/587 (92%), Gaps = 10/587 (1%) Strand = Plus / Minus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116051 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 115992 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 115991 attctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgg 115933 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 | |||| | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| Sbjct: 115932 gggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggt 115873 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 ||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||| Sbjct: 115872 gaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcac 115813 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115812 gtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgacc 115753 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 115752 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatag 115693 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 424 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 115692 aacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtg 115636 Query: 425 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 484 ||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||| Sbjct: 115635 cctgttgaagaatgagccggcgacttataggcagtggcctggttaagggagc-----cca 115581 Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 115580 ccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaa- 115522 Query: 545 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115521 cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 115475 Score = 781 bits (394), Expect = 0.0 Identities = 541/587 (92%), Gaps = 10/587 (1%) Strand = Plus / Plus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86069 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 86128 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 86129 attctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgg 86187 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 | |||| | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| Sbjct: 86188 gggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggt 86247 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 ||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||| Sbjct: 86248 gaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcac 86307 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86308 gtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgacc 86367 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 86368 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatag 86427 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 424 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 86428 aacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtg 86484 Query: 425 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 484 ||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||| Sbjct: 86485 cctgttgaagaatgagccggcgacttataggcagtggcctggttaagggagc-----cca 86539 Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 86540 ccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaa- 86598 Query: 545 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86599 cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 86645
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 779 bits (393), Expect = 0.0 Identities = 406/409 (99%), Gaps = 1/409 (0%) Strand = Plus / Plus Query: 183 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 242 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 243 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 303 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 363 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 423 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 483 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 542 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 360 Query: 543 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 408
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 10/592 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 146405 caggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaa 146346 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 146345 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 146286 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||| ||||||| |||||||||||||||| ||||||| | | |||||||| Sbjct: 146285 gtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctaga 146226 Query: 181 tggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatgg 239 ||| | |||||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 146225 tggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtagcatgg 146166 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146165 ggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 146106 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 146105 tgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtga 146046 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | ||||||||||||||||||| ||| |||| |||||| Sbjct: 146045 aatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgacc 145989 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| Sbjct: 145988 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----gga 145934 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 145933 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 145874 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145873 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 145823 Score = 775 bits (391), Expect = 0.0 Identities = 544/592 (91%), Gaps = 10/592 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112057 caggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaa 112116 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112117 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 112176 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||| ||||||| |||||||||||||||| ||||||| | | |||||||| Sbjct: 112177 gtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctaga 112236 Query: 181 tggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatgg 239 ||| | |||||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct: 112237 tggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtagcatgg 112296 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112297 ggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 112356 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 112357 tgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtga 112416 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | ||||||||||||||||||| ||| |||| |||||| Sbjct: 112417 aatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgacc 112473 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| Sbjct: 112474 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----gga 112528 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 112529 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 112588 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112589 cgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 112639
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 773 bits (390), Expect = 0.0 Identities = 539/587 (91%), Gaps = 9/587 (1%) Strand = Plus / Plus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 218 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 219 attcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgg 278 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 | |||||| | |||||||| |||||||||||| ||||| | | ||||| ||||||| Sbjct: 279 gggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggt 338 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 | |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 339 gagagtccagtagccgaaagcatcactagtttatgctctaacccgagtagcatggggcac 398 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 399 gtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgacc 458 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 459 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatag 518 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 424 ||| |||||||| | |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 519 aacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtg 575 Query: 425 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 484 ||||||||||||||||||||||||| ||||| |||||| |||||||| |||||||| Sbjct: 576 cctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaaccca 630 Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| Sbjct: 631 ccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa- 689 Query: 545 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 690 cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 736
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 767 bits (387), Expect = 0.0 Identities = 539/588 (91%), Gaps = 9/588 (1%) Strand = Plus / Plus Query: 4 gcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 63 |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4047 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 4106 Query: 64 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtg 123 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4107 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 4166 Query: 124 ggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 183 ||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| Sbjct: 4167 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatgg 4226 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | ||||||||||||||||||| |||| |||| || | ||||||||||||||||||| Sbjct: 4227 tgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggca 4286 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4287 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 4346 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 4347 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 4406 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| ||||| || | |||| |||||||||| |||| ||| ||||||||||||||| Sbjct: 4407 gaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgt 4463 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||| |||||||||||| |||||||| |||| | Sbjct: 4464 gcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattc 4518 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 4519 accggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa 4578 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4579 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 4625
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 767 bits (387), Expect = 0.0 Identities = 539/588 (91%), Gaps = 9/588 (1%) Strand = Plus / Plus Query: 4 gcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 63 |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 157 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 216 Query: 64 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtg 123 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 217 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 276 Query: 124 ggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 183 ||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| Sbjct: 277 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatgg 336 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | ||||||||||||||||||| |||| |||| || | ||||||||||||||||||| Sbjct: 337 tgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggca 396 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 456 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 457 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 516 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| ||||| || | |||| |||||||||| |||| ||| ||||||||||||||| Sbjct: 517 gaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgt 573 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||| |||||||||||| |||||||| |||| | Sbjct: 574 gcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattc 628 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 629 accggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa 688 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 689 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 767 bits (387), Expect = 0.0 Identities = 539/588 (91%), Gaps = 9/588 (1%) Strand = Plus / Minus Query: 4 gcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 63 |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 151088 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 151029 Query: 64 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtg 123 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 151028 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 150969 Query: 124 ggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 183 ||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| Sbjct: 150968 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatgg 150909 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | ||||||||||||||||||| |||| |||| || | ||||||||||||||||||| Sbjct: 150908 tgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggca 150849 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150848 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 150789 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 150788 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 150729 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| ||||| || | |||| |||||||||| |||| ||| ||||||||||||||| Sbjct: 150728 gaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgt 150672 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||| |||||||||||| |||||||| |||| | Sbjct: 150671 gcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattc 150617 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 150616 accggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa 150557 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150556 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 150510 Score = 767 bits (387), Expect = 0.0 Identities = 539/588 (91%), Gaps = 9/588 (1%) Strand = Plus / Plus Query: 4 gcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 63 |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117578 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 117637 Query: 64 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtg 123 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117638 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 117697 Query: 124 ggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 183 ||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| Sbjct: 117698 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatgg 117757 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | ||||||||||||||||||| |||| |||| || | ||||||||||||||||||| Sbjct: 117758 tgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggca 117817 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117818 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 117877 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 117878 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 117937 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| ||||| || | |||| |||||||||| |||| ||| ||||||||||||||| Sbjct: 117938 gaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgt 117994 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||| |||||||||||| |||||||| |||| | Sbjct: 117995 gcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattc 118049 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 118050 accggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa 118109 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118110 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 118156
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 767 bits (387), Expect = 0.0 Identities = 539/588 (91%), Gaps = 9/588 (1%) Strand = Plus / Plus Query: 4 gcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 63 |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 157 gcaagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagc 216 Query: 64 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtg 123 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 217 gattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtg 276 Query: 124 ggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 183 ||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| Sbjct: 277 ggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatgg 336 Query: 184 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 243 | ||||||||||||||||||| |||| |||| || | ||||||||||||||||||| Sbjct: 337 tgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggca 396 Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 456 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 457 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 516 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||| ||||| || | |||| |||||||||| |||| ||| ||||||||||||||| Sbjct: 517 gaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgt 573 Query: 424 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 483 |||||||||||||||||||||||||| |||||||||||| |||||||| |||| | Sbjct: 574 gcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattc 628 Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 629 accggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa 688 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 689 -cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 759 bits (383), Expect = 0.0 Identities = 542/593 (91%), Gaps = 13/593 (2%) Strand = Plus / Plus Query: 3 ggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 62 ||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 157 ggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaag 216 Query: 63 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 122 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 217 cgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgt 276 Query: 123 gggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgccgcacccta 178 ||| |||| |||||| || ||| ||||||||||||||| ||||||| | |||||| | Sbjct: 277 gggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcctgcacccca 336 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 ||||| | ||||||||| |||||||||| || | |||||||||| |||||||||||||| Sbjct: 337 gatggtgagagtccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatg 396 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 456 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 457 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 516 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 418 ||||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 517 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgac 573 Query: 419 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 478 ||||||||||||||||||||||||||||||| |||||||||||| |||||||| || Sbjct: 574 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----gg 628 Query: 479 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 538 ||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||||| Sbjct: 629 aacccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggac 688 Query: 539 ccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 689 ccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 740
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 751 bits (379), Expect = 0.0 Identities = 541/592 (91%), Gaps = 10/592 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117995 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 117936 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117935 agcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggtt 117876 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 117875 gtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctaga 117816 Query: 181 tggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatgg 239 ||| | |||||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 117815 tggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatgg 117756 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117755 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 117696 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 117695 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 117636 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 117635 aatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgacc 117579 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 117578 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gga 117524 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 117523 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 117464 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| ||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 117463 cgaa-cctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaag 117413 Score = 751 bits (379), Expect = 0.0 Identities = 541/592 (91%), Gaps = 10/592 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90107 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 90166 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 90167 agcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggtt 90226 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 90227 gtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctaga 90286 Query: 181 tggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatgg 239 ||| | |||||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 90287 tggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatgg 90346 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90347 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 90406 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 90407 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 90466 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 90467 aatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgacc 90523 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 90524 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gga 90578 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 90579 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 90638 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| ||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 90639 cgaa-cctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaag 90689
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 747 bits (377), Expect = 0.0 Identities = 538/589 (91%), Gaps = 6/589 (1%) Strand = Plus / Plus Query: 3 ggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 62 ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 140 ggcaagagacaacctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaag 199 Query: 63 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 122 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 200 cgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgt 259 Query: 123 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 182 ||| |||| | | |||| |||| ||||||||||||| ||||||| | |||||||||||| Sbjct: 260 gggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcaccctagatg 319 Query: 183 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 242 | | ||||||||| |||||||||| || ||||| ||||| ||||||||| |||||||| Sbjct: 320 gtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagtaacatggggc 379 Query: 243 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 439 Query: 303 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 362 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 440 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaat 499 Query: 363 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 422 ||||| |||||||| | |||| ||||||||||||||| ||| |||||||||||||| Sbjct: 500 agaacatgaaaccg---taagcttccaagcagtgggaggagaatcggatctctgaccgcg 556 Query: 423 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 482 ||||||||||||||||||||||||||| |||||||||||| |||||||||||| | | | Sbjct: 557 tgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaaag--aac 614 Query: 483 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 542 |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 615 caccggagccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccga 674 Query: 543 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 | |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 675 a-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 722
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 733 bits (370), Expect = 0.0 Identities = 529/579 (91%), Gaps = 10/579 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2198 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 2257 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2258 agcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggtt 2317 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 2318 gtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctaga 2377 Query: 181 tggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatgg 239 ||| | |||||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 2378 tggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatgg 2437 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2438 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 2497 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 2498 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 2557 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 2558 aatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgacc 2614 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 2615 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gga 2669 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 2670 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 2729 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagctt 578 |||| ||||||||||||| |||||||||||||||||||| Sbjct: 2730 cgaa-cctgggtgatctaaccatgaccaggatgaagctt 2767
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 726 bits (366), Expect = 0.0 Identities = 446/470 (94%), Gaps = 6/470 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 92 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 152 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 153 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 212 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 272 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 332 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 333 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 392 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 393 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 447 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 469 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 497
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 712 bits (359), Expect = 0.0 Identities = 442/467 (94%), Gaps = 6/467 (1%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 403 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 343 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 179 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 342 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 283 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 223 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 222 ggcacgtggaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctggg 163 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 162 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 103 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 102 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 48 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 466 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 1
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 706 bits (356), Expect = 0.0 Identities = 361/363 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 213 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 273 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 333 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 334 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 393 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 453 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 513 Query: 361 ata 363 ||| Sbjct: 514 ata 516
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 698 bits (352), Expect = 0.0 Identities = 357/359 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 127 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 187 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 247 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 248 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 307 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 367 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 426
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 690 bits (348), Expect = 0.0 Identities = 535/592 (90%), Gaps = 13/592 (2%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 154 caggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaaataaagcaaa 213 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 214 agcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggtt 273 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcgg-ttgagtgccgcaccctag 179 |||||||||||||| |||||| ||||||||||||||||| | || | || ||||||||| Sbjct: 274 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctag 333 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 239 ||||| |||||||||||| | |||||||||||| || ||||||||||||||||||||| Sbjct: 334 atggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagtagcatgg 393 Query: 240 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 299 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 453 Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 359 | ||| |||| ||||||||||||||||||| ||||||||||| ||||| |||| ||||| Sbjct: 454 taaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattggggagtga 512 Query: 360 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 419 |||||||| |||||||| | |||| ||||||||||||||| | || | |||||||| Sbjct: 513 aatagaacatgaaaccg---taagctaccaagcagtgggaggagccaggg--ctctgacc 567 Query: 420 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 479 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 568 gcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-----gga 622 Query: 480 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 539 ||||||||||||| |||||||||||||| || ||||| | |||||||||||||||||||| Sbjct: 623 acccaccggagccatagcgaaagcgagtattcataggactattgtcactgcttatggacc 682 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||| |||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 683 cgaa-cctgggtgatctatccatgaccaggatgaagctttggtgaaactaag 733
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 680 bits (343), Expect = 0.0 Identities = 356/359 (99%), Gaps = 1/359 (0%) Strand = Plus / Plus Query: 233 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 293 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 353 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 412 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 413 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 473 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 532 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 533 atggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 358
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 666 bits (336), Expect = 0.0 Identities = 385/401 (96%), Gaps = 3/401 (0%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130381 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 130322 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130321 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 130262 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 130261 gtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 130202 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130201 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 130142 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130141 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 130082 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 130081 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 130022 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 130021 atagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 666 bits (336), Expect = 0.0 Identities = 385/401 (96%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102075 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 102134 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102135 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 102194 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 102195 gtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 102254 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102255 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 102314 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102315 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 102374 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 102375 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 102434 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 102435 atagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 262 bits (132), Expect = 1e-66 Identities = 169/180 (93%), Gaps = 6/180 (3%) Strand = Plus / Minus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 129796 Score = 262 bits (132), Expect = 1e-66 Identities = 169/180 (93%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 102660
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 658 bits (332), Expect = 0.0 Identities = 384/401 (95%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 46406 caggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 46465 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 46466 agcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggtt 46525 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 46526 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctaga 46585 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46586 tggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 46645 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46646 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 46705 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 46706 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 46765 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46766 atagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 278 bits (140), Expect = 2e-71 Identities = 171/180 (95%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 46991
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 656 bits (331), Expect = 0.0 Identities = 341/343 (99%), Gaps = 1/343 (0%) Strand = Plus / Plus Query: 249 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 309 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 369 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 429 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 489 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 548 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 299 Query: 549 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 342
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 642 bits (324), Expect = 0.0 Identities = 382/401 (95%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||| ||| |||||||| | |||||||||||||||||||| Sbjct: 522 ataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 194 bits (98), Expect = 2e-46 Identities = 135/146 (92%), Gaps = 6/146 (4%) Strand = Plus / Plus Query: 446 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 505 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 506 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 565 ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgac 705 Query: 566 caggatgaagcttggatgaaactaag 591 ||||||||||||||| |||||||||| Sbjct: 706 caggatgaagcttgggtgaaactaag 731
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 642 bits (324), Expect = 0.0 Identities = 382/401 (95%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||| Sbjct: 462 gaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccgggagtgaa 521 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 246 bits (124), Expect = 7e-62 Identities = 167/180 (92%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 642 bits (324), Expect = 0.0 Identities = 382/401 (95%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 224 bits (113), Expect = 3e-55 Identities = 167/181 (92%), Gaps = 8/181 (4%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 472 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 530 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 531 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 590 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 695 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 753 Query: 591 g 591 | Sbjct: 754 g 754
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 640 bits (323), Expect = e-180 Identities = 345/350 (98%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 424 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 481 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 482 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122520 aa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122472 Score = 478 bits (241), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123315 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 123256 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123255 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 123196 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123195 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 123136 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 123135 tggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtagcatggg 123076 Query: 241 gcacgtggaatc 252 |||||||||||| Sbjct: 123075 gcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 640 bits (323), Expect = e-180 Identities = 345/350 (98%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 244 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 304 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 364 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 424 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 481 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 482 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 541 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825061 aa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 12825013 Score = 478 bits (241), Expect = e-131 Identities = 249/252 (98%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825856 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 12825797 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825796 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 12825737 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825736 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 12825677 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 12825676 tggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtagcatggg 12825617 Query: 241 gcacgtggaatc 252 |||||||||||| Sbjct: 12825616 gcacgtggaatc 12825605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 189 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 248 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 634 bits (320), Expect = e-179 Identities = 381/401 (95%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccgggagtgaa 521 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 212 bits (107), Expect = 1e-51 Identities = 164/180 (91%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 634 bits (320), Expect = e-179 Identities = 381/401 (95%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||| ||| |||||||| | |||||||||||||||||||| Sbjct: 522 ataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 214 bits (108), Expect = 2e-52 Identities = 164/180 (91%), Gaps = 7/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 753
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 628 bits (317), Expect = e-177 Identities = 408/436 (93%), Gaps = 6/436 (1%) Strand = Plus / Plus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 207 caagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcg 266 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 326 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 |||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| Sbjct: 327 gagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggc 386 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 387 gatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcac 446 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 506 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 507 gatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatag 566 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgt 423 ||| |||||||| | ||||||||||||| |||||| | || | |||||||||||| Sbjct: 567 aacatgaaaccg---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgt 621 Query: 424 gcctgttgaagaatga 439 |||||||||||||||| Sbjct: 622 gcctgttgaagaatga 637
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 615 bits (310), Expect = e-173 Identities = 384/407 (94%), Gaps = 4/407 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 221 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctaga 341 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 360 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaa 520 Query: 361 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 407 ||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 521 ataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564 Score = 188 bits (95), Expect = 1e-44 Identities = 111/115 (96%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 477 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 536 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 537 acccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 662 acccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 715
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 597 bits (301), Expect = e-167 Identities = 306/308 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 118 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 178 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 238 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 239 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 298 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 358 Query: 301 gaccgata 308 |||||||| Sbjct: 359 gaccgata 366
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 565 bits (285), Expect = e-158 Identities = 437/483 (90%), Gaps = 11/483 (2%) Strand = Plus / Minus Query: 110 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 169 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 170 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 229 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 230 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 290 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 349 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 350 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 409 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 410 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 469 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 470 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 529 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 530 c-ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaact 588 | ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5872 ctttatggacccgaa-cctgggtgatctatccatgaccaggatgaagc-tggatgaaact 5815 Query: 589 aag 591 ||| Sbjct: 5814 aag 5812 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Minus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 6411 caacctggtgaactgaaacatcttagtaaccagaggaagagaaagcaaaagcgattcccg 6352 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccgt 108 ||||||||||||||||||||||||||||||||||||| Sbjct: 6351 tagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 559 bits (282), Expect = e-156 Identities = 323/337 (95%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131 caggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaa 190 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 250 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| Sbjct: 251 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctaga 310 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 311 tggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 370 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 430 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 337 |||||||||||||||||||||||||||||| |||||| Sbjct: 431 gaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 557 bits (281), Expect = e-155 Identities = 332/347 (95%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 210 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 270 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| |||||||||||||||||||| || | | |||||||||| Sbjct: 271 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcaccctaga 330 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 331 tggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 390 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 391 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggt 448 Query: 301 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 347 ||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 449 gaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 184 bits (93), Expect = 2e-43 Identities = 132/142 (92%), Gaps = 6/142 (4%) Strand = Plus / Plus Query: 452 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 510 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 511 aatagggcgattgtcactgcttatggacccgaaccct-gggtgatctatccatgaccagg 569 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 570 atgaagcttggatgaaactaag 591 ||||||||||| |||||||||| Sbjct: 729 atgaagcttgggtgaaactaag 750
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 551 bits (278), Expect = e-154 Identities = 510/584 (87%), Gaps = 14/584 (2%) Strand = Plus / Minus Query: 3 ggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 62 ||||||| || ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 63 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 122 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 123 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 178 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 418 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 419 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 478 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 138644 Query: 479 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 538 |||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||| Sbjct: 138643 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggac 138584 Query: 539 ccgaaccctgggtgatctatccatgaccaggatgaagcttggat 582 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138583 ccgaaccc-gggtgatctatccatgaccaggatgaagcttggat 138541 Score = 551 bits (278), Expect = e-154 Identities = 510/584 (87%), Gaps = 14/584 (2%) Strand = Plus / Plus Query: 3 ggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 62 ||||||| || ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 63 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 122 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 123 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 178 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 239 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 298 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 299 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 358 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 359 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 418 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 419 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 478 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 83233 Query: 479 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 538 |||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||| Sbjct: 83234 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggac 83293 Query: 539 ccgaaccctgggtgatctatccatgaccaggatgaagcttggat 582 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83294 ccgaaccc-gggtgatctatccatgaccaggatgaagcttggat 83336
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 527 bits (266), Expect = e-146 Identities = 292/301 (97%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 caggcaggagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 246 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 186 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 185 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 126 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 125 tggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 66 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 6 Query: 301 g 301 | Sbjct: 5 g 5
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 504 bits (254), Expect = e-139 Identities = 507/587 (86%), Gaps = 6/587 (1%) Strand = Plus / Plus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||| ||||||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 144078 caagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcg 144137 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||||||||| Sbjct: 144138 attcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgg 144197 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 ||||| || || | || | ||||||||||| ||||||||| |||||| |||||| Sbjct: 144198 gagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggt 144257 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 | ||||||||||||| ||| | |||||| | |||| |||| ||||||||||||||| Sbjct: 144258 gatagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcac 144317 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 | |||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||| Sbjct: 144318 gcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgacc 144377 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 144378 gatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatag 144437 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 424 ||| |||||||| ||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 144438 aacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtg 144494 Query: 425 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 484 ||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||| Sbjct: 144495 cctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc- 144552 Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||||||||||||||||||||| | |||| |||||||| |||||| ||||||| Sbjct: 144553 ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaa- 144611 Query: 545 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 144612 cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 144658 Score = 504 bits (254), Expect = e-139 Identities = 507/587 (86%), Gaps = 6/587 (1%) Strand = Plus / Minus Query: 5 caaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 64 ||||| |||||| ||||||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 88773 caagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcg 88714 Query: 65 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 124 |||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||||||||| Sbjct: 88713 attcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgg 88654 Query: 125 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 184 ||||| || || | || | ||||||||||| ||||||||| |||||| |||||| Sbjct: 88653 gagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggt 88594 Query: 185 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 244 | ||||||||||||| ||| | |||||| | |||| |||| ||||||||||||||| Sbjct: 88593 gatagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcac 88534 Query: 245 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 304 | |||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||| Sbjct: 88533 gcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgacc 88474 Query: 305 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 364 |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 88473 gatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatag 88414 Query: 365 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 424 ||| |||||||| ||||||||||||||||||||| ||| | ||||||| |||||||| Sbjct: 88413 aacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtg 88357 Query: 425 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 484 ||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||| Sbjct: 88356 cctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc- 88299 Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||||||||||||||||||||| | |||| |||||||| |||||| ||||||| Sbjct: 88298 ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaa- 88240 Query: 545 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 88239 cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 88193
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 186 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 245 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 246 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 306 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 365 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 366 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 425 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 426 ctgttgaagaatgagccggcgactcataggcagtggcttg 465 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 410 bits (207), Expect = e-111 Identities = 385/441 (87%), Gaps = 10/441 (2%) Strand = Plus / Plus Query: 147 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 206 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 207 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 266 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 267 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 326 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 327 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 386 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 387 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 446 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 447 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 506 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 507 tcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgacc 566 || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 654 tc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggcc 711 Query: 567 aggatgaagcttggatgaaac 587 |||||||||||||| |||||| Sbjct: 712 aggatgaagcttgggtgaaac 732 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 227 Query: 73 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 130 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 228 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 406 bits (205), Expect = e-110 Identities = 383/439 (87%), Gaps = 10/439 (2%) Strand = Plus / Minus Query: 147 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 206 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 207 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 266 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 267 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 326 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 327 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 386 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 387 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 446 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 447 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 506 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 507 tcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgacc 566 || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 124611 tc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggcc 124554 Query: 567 aggatgaagcttggatgaa 585 |||||||||||||| |||| Sbjct: 124553 aggatgaagcttgggtgaa 124535 Score = 406 bits (205), Expect = e-110 Identities = 383/439 (87%), Gaps = 10/439 (2%) Strand = Plus / Plus Query: 147 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 206 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 207 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 266 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 267 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 326 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 327 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 386 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 387 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 446 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 447 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 506 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 507 tcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgacc 566 || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 95255 tc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggcc 95312 Query: 567 aggatgaagcttggatgaa 585 |||||||||||||| |||| Sbjct: 95313 aggatgaagcttgggtgaa 95331 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125097 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 125038 Query: 73 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 130 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125037 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94769 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 94828 Query: 73 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 130 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94829 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 62 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 121 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 122 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 180 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 301 gaccgata 308 |||||||| Sbjct: 241 gaccgata 248
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 400 bits (202), Expect = e-108 Identities = 324/361 (89%), Gaps = 9/361 (2%) Strand = Plus / Plus Query: 225 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 284 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 285 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 465 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 524 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 525 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 584 |||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| ||| Sbjct: 670 cactgcttatggacccgaaccc-gggtgatctaaccatggccagggtgaagcttgggtga 728 Query: 585 a 585 | Sbjct: 729 a 729 Score = 174 bits (88), Expect = 2e-40 Identities = 102/107 (95%) Strand = Plus / Plus Query: 2 aggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 203 Query: 62 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 108 ||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 204 gcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 400 bits (202), Expect = e-108 Identities = 324/361 (89%), Gaps = 9/361 (2%) Strand = Plus / Plus Query: 225 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 284 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 285 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 465 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 524 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 525 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 584 |||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| ||| Sbjct: 683 cactgcttatggacccgaaccc-gggtgatctaaccatggccagggtgaagcttgggtga 741 Query: 585 a 585 | Sbjct: 742 a 742 Score = 174 bits (88), Expect = 2e-40 Identities = 102/107 (95%) Strand = Plus / Plus Query: 2 aggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 216 Query: 62 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 108 ||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 217 gcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 394 bits (199), Expect = e-106 Identities = 324/361 (89%), Gaps = 11/361 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 465 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 466 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 524 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 525 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 584 |||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| ||| Sbjct: 787 cactgcttatggacccgaaccc-gggtgatctaaccatggccagggtgaagcttgggtga 845 Query: 585 a 585 | Sbjct: 846 a 846 Score = 172 bits (87), Expect = 8e-40 Identities = 101/106 (95%) Strand = Plus / Plus Query: 2 aggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 320 Query: 62 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 321 gcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 389 bits (196), Expect = e-105 Identities = 253/270 (93%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2754 caggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaa 2813 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2814 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 2873 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 178 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 2874 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 2933 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 |||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 2934 gatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagcata 2992 Query: 239 gggcacgtggaatcccgtgtgaatcagcaa 268 |||||||||||||||||||||||||||||| Sbjct: 2993 gggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 389 bits (196), Expect = e-105 Identities = 253/270 (93%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 caggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaa 1068 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 1128 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 178 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 1129 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 1188 Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 238 |||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1189 gatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagcata 1247 Query: 239 gggcacgtggaatcccgtgtgaatcagcaa 268 |||||||||||||||||||||||||||||| Sbjct: 1248 gggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 375 bits (189), Expect = e-100 Identities = 344/391 (87%), Gaps = 11/391 (2%) Strand = Plus / Plus Query: 201 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 260 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 261 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 320 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 321 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 380 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 381 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 440 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 441 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 500 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 501 agcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatcc 560 ||| |||||| ||||||| | ||||| |||||||| ||||||| | ||||||||||| || Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaa-cttgggtgatctaacc 721 Query: 561 atgaccaggatgaagcttggatgaaactaag 591 |||||||||||||| |||| |||||||||| Sbjct: 722 atgaccaggatgaaatttggttgaaactaag 752 Score = 131 bits (66), Expect = 3e-27 Identities = 143/168 (85%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 161 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 220 Query: 73 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 132 ||||| ||||||||||| |||| |||||||||||| |||| |||||| || |||||| Sbjct: 221 agtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggtt---ggggagcaa 277 Query: 133 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 || ||| ||||| |||||| |||||| || |||| | | |||||||| Sbjct: 278 taaaagtattgtgttgctagacgaagcagtggagttctgaaccctaga 325
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 365 bits (184), Expect = 1e-97 Identities = 258/283 (91%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 3660 caggcaagagacaacctggcaaactgaaatatcttagtagccagaggaaaagaaagcaaa 3601 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 || ||||||||||||| || |||| ||||||||||||||||||||||| |||| | |||| Sbjct: 3600 agtgattcccgtagtaacgacgagtgaaatgggagcagcctaaaccgtaaaaatgaggtt 3541 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 180 ||||||||||||| ||| ||| |||| ||||||| ||||||| ||||| |||||||||| Sbjct: 3540 gtgggagagcaatgcaaacgtagtgccgctaggcaaagcggtggagtgttgcaccctaga 3481 Query: 181 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 240 |||| | ||| |||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 3480 tggcgagagtttagtagccgaaagcatccctagcttacgctctgacccgagtagcatggg 3421 Query: 241 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 283 |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3420 gcacgtggaatcccgtgtgaattagcaaggaccaccttgcaag 3378 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%), Gaps = 5/134 (3%) Strand = Plus / Minus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 532 tatggacccgaacc 545 |||||||||||||| Sbjct: 3134 tatggacccgaacc 3121 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 292 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 351 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 352 ggtagtgaaatagaacgtgaaacc 375 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 359 bits (181), Expect = 7e-96 Identities = 471/561 (83%), Gaps = 15/561 (2%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 162 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 221 Query: 73 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 132 ||||| ||| | |||| |||| ||||||||| || |||| ||||||| || ||||| Sbjct: 222 agtagtggcaaatgaaaagggaacagcctaaatcgctaaaatggggttgggg---agcaa 278 Query: 133 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 192 || ||| || || |||||| || || || |||| | | ||||||||||| | ||||| Sbjct: 279 taaaagtattttgttgctagacggagtagtggagttctgaaccctagatggtgagagtcc 338 Query: 193 agtagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtggaat 251 ||||| |||| |||| ||||||||||| | | ||||||||||||||| || |||||| Sbjct: 339 agtagtataaagtatcattagcttatgcttttaacccgagtagcatgggacatatggaat 398 Query: 252 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 311 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| | Sbjct: 399 cccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaatagtg 458 Query: 312 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 371 ||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| ||| Sbjct: 459 aagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaacatga 518 Query: 372 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 431 || | | ||| ||||||||||||||| || || | |||||||| |||||| |||| Sbjct: 519 aaac---atatgctaccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttg 573 Query: 432 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 491 ||||||||| |||||||||||| | |||||| ||||||||| |||| |||||||||| Sbjct: 574 aagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagc 628 Query: 492 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 551 | |||||||||| |||||| |||||| | ||||| ||||| |||||||||| | ||||| Sbjct: 629 catagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaa-cttgggt 687 Query: 552 gatctatccatgaccaggatg 572 |||||| |||||||||||||| Sbjct: 688 gatctaaccatgaccaggatg 708
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 355 bits (179), Expect = 1e-94 Identities = 321/363 (88%), Gaps = 9/363 (2%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 465 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 466 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 525 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 526 actgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaa 585 |||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | |||| Sbjct: 670 actgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtgaa 728 Query: 586 act 588 ||| Sbjct: 729 act 731 Score = 145 bits (73), Expect = 2e-31 Identities = 93/100 (93%) Strand = Plus / Plus Query: 7 aganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 66 ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 208 Query: 67 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 209 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 355 bits (179), Expect = 1e-94 Identities = 321/363 (88%), Gaps = 9/363 (2%) Strand = Plus / Minus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 465 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 466 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 525 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 526 actgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaa 585 |||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | |||| Sbjct: 114992 actgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtgaa 114934 Query: 586 act 588 ||| Sbjct: 114933 act 114931 Score = 355 bits (179), Expect = 1e-94 Identities = 321/363 (88%), Gaps = 9/363 (2%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 465 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 466 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 525 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 526 actgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaa 585 |||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | |||| Sbjct: 86996 actgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtgaa 87054 Query: 586 act 588 ||| Sbjct: 87055 act 87057 Score = 145 bits (73), Expect = 2e-31 Identities = 93/100 (93%) Strand = Plus / Minus Query: 7 aganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 66 ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 115455 Query: 67 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115454 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 145 bits (73), Expect = 2e-31 Identities = 93/100 (93%) Strand = Plus / Plus Query: 7 aganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 66 ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 86533 Query: 67 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86534 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 355 bits (179), Expect = 1e-94 Identities = 363/421 (86%), Gaps = 5/421 (1%) Strand = Plus / Plus Query: 171 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 230 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 231 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 290 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 291 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 350 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 351 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 410 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 411 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 470 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 471 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 530 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 4725 Query: 531 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 590 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4726 ctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 591 g 591 | Sbjct: 4785 g 4785 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4200 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 4259 Query: 73 agtagcggcgagcgaaatgggagcagcctaaa 104 ||||||||||||||||||||||| |||||||| Sbjct: 4260 agtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 355 bits (179), Expect = 1e-94 Identities = 363/421 (86%), Gaps = 5/421 (1%) Strand = Plus / Plus Query: 171 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 230 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 231 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 290 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 291 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 350 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 351 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 410 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 411 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 470 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 471 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 530 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 531 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 590 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 693 ctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 591 g 591 | Sbjct: 752 g 752 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 167 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 226 Query: 73 agtagcggcgagcgaaatgggagcagcctaaa 104 ||||||||||||||||||||||| |||||||| Sbjct: 227 agtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 355 bits (179), Expect = 1e-94 Identities = 363/421 (86%), Gaps = 5/421 (1%) Strand = Plus / Plus Query: 171 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 230 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 231 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 290 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 291 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 350 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 351 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 410 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 411 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 470 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 471 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 530 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 531 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 590 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 693 ctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 591 g 591 | Sbjct: 752 g 752 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 167 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 226 Query: 73 agtagcggcgagcgaaatgggagcagcctaaa 104 ||||||||||||||||||||||| |||||||| Sbjct: 227 agtagcggcgagcgaaatgggagaagcctaaa 258
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 171 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 230 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 231 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 290 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 291 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 350 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 351 gggtagtgaaatagaacgtgaaaccgt 377 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 320 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 379 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 380 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 439 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 440 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 323 bits (163), Expect = 4e-85 Identities = 248/273 (90%), Gaps = 10/273 (3%) Strand = Plus / Plus Query: 319 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 378 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 379 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 438 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 439 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 498 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcg 171 Query: 499 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctat 558 |||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctat 230 Query: 559 ccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||| |||||||||| Sbjct: 231 ccatgaccaggatgaagcttgggtgaaactaag 263
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 319 bits (161), Expect = 6e-84 Identities = 212/228 (92%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| | |||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 177185 caggcaagagagaaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaa 177244 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 177245 agcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggtt 177304 Query: 121 gtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctag 179 ||||||||||||||||||||| |||| |||||||||||| | || ||| ||||||||| Sbjct: 177305 gtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctag 177364 Query: 180 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 227 ||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177365 atggcgaaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 278 bits (140), Expect = 2e-71 Identities = 171/180 (95%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 177578 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagc 41 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagc 41 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 315 bits (159), Expect = 9e-83 Identities = 322/373 (86%), Gaps = 5/373 (1%) Strand = Plus / Plus Query: 219 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 278 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 279 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 338 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 339 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 398 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 399 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 458 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 459 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 518 ||||| ||||||||||| | ||| |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcagggc 675 Query: 519 gattgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagctt 578 |||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||| Sbjct: 676 tattgtcactgtctatggacccgaaccc-gggtgatctaaccatggccaggatgaagctt 734 Query: 579 ggatgaaactaag 591 || |||||||||| Sbjct: 735 gggtgaaactaag 747 Score = 143 bits (72), Expect = 7e-31 Identities = 92/99 (92%) Strand = Plus / Plus Query: 6 aaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 65 |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 220 Query: 66 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 104 || || ||||||||||||||||||||||| |||||||| Sbjct: 221 tttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 311 bits (157), Expect = 1e-81 Identities = 312/361 (86%), Gaps = 12/361 (3%) Strand = Plus / Plus Query: 225 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 284 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 285 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 465 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 524 ||||||| ||| || ||||||||||||||||| |||| | || |||| ||| Sbjct: 574 ggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatgt 625 Query: 525 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 584 ||||| |||| ||||||||||| |||||||||||||||| ||||| |||| ||||| ||| Sbjct: 626 cactgtttatagacccgaaccc-gggtgatctatccatggccagggtgaaacttgggtga 684 Query: 585 a 585 | Sbjct: 685 a 685 Score = 155 bits (78), Expect = 2e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctc 181 Query: 73 agtagcggcgagcgaaatgggagcagcctaaacc 106 ||||| |||||||||||||||| ||||||||||| Sbjct: 182 agtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 311 bits (157), Expect = 1e-81 Identities = 305/351 (86%), Gaps = 10/351 (2%) Strand = Plus / Plus Query: 230 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 289 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 290 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 349 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 350 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 409 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggaggaggattga 561 Query: 410 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 469 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 470 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 529 |||||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 agggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675 Query: 530 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 676 tttatggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgg 725 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || Sbjct: 176 gaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagtagtgg 235 Query: 81 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 126 ||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 236 cgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 297 bits (150), Expect = 2e-77 Identities = 244/271 (90%), Gaps = 12/271 (4%) Strand = Plus / Plus Query: 321 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 380 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 381 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 440 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 441 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 500 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaa 169 Query: 501 agcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatcc 560 |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatcc 228 Query: 561 atgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||| |||||||||| Sbjct: 229 atgaccaggatgaagcttgggtgaaactaag 259
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 293 bits (148), Expect = 3e-76 Identities = 158/160 (98%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 432 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 492 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 551 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggt 120 Query: 552 gatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gatctatccatgaccaggatgaagcttggatgaaactaag 160
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 291 bits (147), Expect = 1e-75 Identities = 157/159 (98%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 433 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 493 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtg 552 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtg 119 Query: 553 atctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctatccatgaccaggatgaagcttggatgaaactaag 158
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 237 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 238 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 297 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 298 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 357 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 358 gaaatagaacgtgaaaccgtgctgagctcc 387 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 237 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 238 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 297 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 298 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 357 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 358 gaaatagaacgtgaaaccgtgctgagctcc 387 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 289 bits (146), Expect = 5e-75 Identities = 300/346 (86%), Gaps = 14/346 (4%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 465 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 466 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 522 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 523 gtcactgcttatggacccgaaccctgggtgatctatccatgaccag 568 |||||| |||||||||||||| || || ||||||||||||| |||| Sbjct: 661 gtcacttcttatggacccgaa-ccgggatgatctatccatggccag 705 Score = 103 bits (52), Expect = 6e-19 Identities = 75/83 (90%) Strand = Plus / Plus Query: 6 aaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 65 |||| |||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 66 ttcccgtagtagcggcgagcgaa 88 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 237 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 238 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 297 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 298 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 357 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 358 gaaatagaacgtgaaaccgtgctgagctcc 387 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 380 tgagctcccaagcagtgggaggggaaagtgatc 412 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 435 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 494 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 495 agcgaaagcgagtcttaatagggcgattgtcactgctta 533 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactactta 9056676
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 179 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 237 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 238 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 297 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 298 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 357 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 358 gaaatagaacgtgaaaccgtgctgagctcc 387 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 380 tgagctcccaagcagtgggaggggaaagtgatc 412 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 435 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 494 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 495 agcgaaagcgagtcttaatagggcgattgtcactgctta 533 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactactta 9128373
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 287 bits (145), Expect = 2e-74 Identities = 308/361 (85%), Gaps = 11/361 (3%) Strand = Plus / Plus Query: 225 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 284 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 285 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 465 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 524 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 525 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 584 ||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||| ||| Sbjct: 1074 cactgtttatggacccgaaccc-gggtgatctatccatggccagggtgaagcttgggtga 1132 Query: 585 a 585 | Sbjct: 1133 a 1133 Score = 143 bits (72), Expect = 7e-31 Identities = 95/103 (92%) Strand = Plus / Plus Query: 6 aaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 65 |||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 561 aagagacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcga 620 Query: 66 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 108 ||||| |||||| ||||||||||| |||| ||||||||||||| Sbjct: 621 ttcccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 278 bits (140), Expect = 2e-71 Identities = 171/180 (95%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 235
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 278 bits (140), Expect = 2e-71 Identities = 171/180 (95%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 219
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 465 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 466 gttaagg 472 ||||||| Sbjct: 644 gttaagg 650 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||||| || Sbjct: 154 caacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgatttcct 213 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaac 105 ||||||||||||||||| || | |||||||||| Sbjct: 214 gagtagcggcgagcgaaacggaatcagcctaaac 247
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 274 bits (138), Expect = 3e-70 Identities = 140/141 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 212 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 272 Query: 121 gtgggagagcaatacaagcgt 141 ||||||||||||||||||||| Sbjct: 273 gtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 274 bits (138), Expect = 3e-70 Identities = 140/141 (99%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 212 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 272 Query: 121 gtgggagagcaatacaagcgt 141 ||||||||||||||||||||| Sbjct: 273 gtgggagagcaatacaagcgt 293
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 262 bits (132), Expect = 1e-66 Identities = 215/238 (90%), Gaps = 11/238 (4%) Strand = Plus / Plus Query: 355 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 414 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 364802 Query: 475 acggaacccaccggagccgtagcgaaa-gcgagtcttaatagggcgattgtcactgctta 533 ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 364803 --ggaacccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 534 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364861 tggacccgaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 300 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 220 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 279 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 280 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 339 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 340 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 399 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 400 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 459 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 460 ggcttggttaagg 472 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 73 agtagcggcgagcgaaatgggagcagcctaaacc 106 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 95.6 bits (48), Expect = 2e-16 Identities = 91/104 (87%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaac 587 ||| |||||||||||||||| ||||||||||| |||| |||||| Sbjct: 652 ccc-gggtgatctatccatggccaggatgaagtttgggtgaaac 694
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 254 bits (128), Expect = 3e-64 Identities = 306/358 (85%), Gaps = 13/358 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 344 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 465 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc--gatt 522 ||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| || Sbjct: 590 ggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatc 645 Query: 523 gtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 |||||| ||| |||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 646 gtcactttttagggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgg 702 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaac 105 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 465 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 466 gttaagg 472 ||||||| Sbjct: 611 gttaagg 617 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 163 gaactgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcgg 222 Query: 81 cgagcgaaatgggagcagcctaaaccg 107 ||||||||| |||| |||||||||||| Sbjct: 223 cgagcgaaacgggaccagcctaaaccg 249 Score = 87.7 bits (44), Expect = 4e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttggatgaaac 587 ||| |||||||||| ||||| |||||| ||||||||| |||||| Sbjct: 684 ccc-gggtgatctaaccatggccaggaggaagcttgggtgaaac 726
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 154 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 213 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 214 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 273 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 274 accttgcaaggctaaatactcctgggtgaccga 306 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 154 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 213 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccg 107 |||||||||||||| || |||| |||||||||||| Sbjct: 214 gagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 91.7 bits (46), Expect = 2e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 710 -gggtgatctaaccatggccaggatgaagcttgg 742
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1920 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 1979 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccg 107 |||||||||||||| || |||| |||||||||||| Sbjct: 1980 gagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 91.7 bits (46), Expect = 2e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 2479 -gggtgatctaaccatggccaggatgaagcttgg 2511
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 173 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 232 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 233 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 292 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 293 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 352 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 353 gtagtgaaatagaacgtgaaa 373 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 157 bits (79), Expect = 5e-35 Identities = 157/180 (87%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 472 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 531 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 |||||||||||| | ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaa-cttgggtgatctaaccatgaccaagatgaaatttggttgaaactaag 739 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 ||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||| || | Sbjct: 163 aacctggtgaactgaatcatcttagtagacagaggaaaataaagcaaaagttattaccat 222 Query: 73 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 121 ||||| |||||| |||| |||| |||||||||||| |||| ||||||| Sbjct: 223 agtagtggcgagtgaaaagggaacagcctaaaccgctaaaatggggttg 271
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 232 bits (117), Expect = 1e-57 Identities = 122/124 (98%) Strand = Plus / Minus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79616 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 79557 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 79556 agcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggtt 79497 Query: 121 gtgg 124 |||| Sbjct: 79496 gtgg 79493
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 368 gtgaaa 373 ||||| Sbjct: 503 atgaaa 508 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 472 gg 473 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggag 95 ||| ||||| ||||| Sbjct: 232 cgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 368 gtgaaa 373 ||||| Sbjct: 503 atgaaa 508 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 472 gg 473 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 13 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 72 |||| |||||||||||||||||||||| ||||||||||| |||||||||| |||||| | Sbjct: 164 aacccggcgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccat 223 Query: 73 agtagcggcgagcgaaatgggagcagcctaa 103 ||||| ||||| ||||| |||| || ||||| Sbjct: 224 agtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggagcagcctaa 103 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 403 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 404 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 463 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 464 tggttaagg 472 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 523 gtcactgcttatggacccgaaccctgggtgatctatccatgaccag 568 |||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaaccc-gggtgatctaatcatgaccag 727
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 403 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 404 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 463 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 464 tggttaagg 472 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 523 gtcactgcttatggacccgaaccctgggtgatctatccatgaccag 568 |||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaaccc-gggtgatctaatcatgaccag 727
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 216 bits (109), Expect = 6e-53 Identities = 165/181 (91%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 470 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 471 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 530 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 531 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 590 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 193 Query: 591 g 591 | Sbjct: 194 g 194
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 2e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 406 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 |||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||| Sbjct: 154 caacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcgattccct 213 Query: 72 tagtagcggcgagcgaaatggga 94 ||||||||||||||||||||||| Sbjct: 214 tagtagcggcgagcgaaatggga 236 Score = 50.1 bits (25), Expect = 0.008 Identities = 47/53 (88%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 523 gtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaag 575 |||||| |||||||||||||| ||||| ||||||| |||||| || ||||||| Sbjct: 806 gtcacttcttatggacccgaa-cctggatgatctaaccatgagcatgatgaag 857
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccg 376 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 131 bits (66), Expect = 3e-27 Identities = 95/105 (90%) Strand = Plus / Plus Query: 2 aggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 61 |||||||| | |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 62 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgact 449 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 44.1 bits (22), Expect = 0.51 Identities = 71/85 (83%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 495 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtg 552 ||||||||||||||| |||||||| | |||| | |||| |||||||||||| || | Sbjct: 873 agcgaaagcgagtctgaatagggcatataagtcatttcttacggacccgaaccc-ggtcg 931 Query: 553 atctatccatgaccaggatgaagct 577 ||||| ||||| ||||||||||||| Sbjct: 932 atctaaccatgtccaggatgaagct 956
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 188 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 247 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 248 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 307 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 308 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 367 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 368 gtgaaa 373 ||||| Sbjct: 504 atgaaa 509 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 81 cgagcgaaatgggag 95 ||| ||||| ||||| Sbjct: 232 cgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 412 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 471 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 472 gg 473 || Sbjct: 602 gg 603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 139 bits (70), Expect = 1e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 2 aggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 61 |||||||| | |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 62 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgact 449 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930 Score = 46.1 bits (23), Expect = 0.13 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 530 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 |||| |||||||||||| || |||||| ||||| |||||||||||||||| Sbjct: 1030 cttacggacccgaaccc-ggtcgatctaaccatgtccaggatgaagcttgg 1079
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 85 cgaaatgggagcagcctaaacc 106 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 413 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 534 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 712 tggacccgaaccc-gggtgatctaatcatgaccaggatgaagcttgg 757 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 496 gcgaaagcgagtcttaatagggcga 520 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 403 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 404 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 461 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/88 (87%), Gaps = 4/88 (4%) Strand = Plus / Plus Query: 484 accggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 540 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 541 gaaccctgggtgatctatccatgaccag 568 |||||| ||||||||||| ||||||||| Sbjct: 745 gaaccc-gggtgatctattcatgaccag 771
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 9e-49 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 344 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 465 ggttaagg 472 |||||||| Sbjct: 675 ggttaagg 682 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 ||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 147 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccg 206 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||||||||||| |||| |||||||||||| Sbjct: 207 gagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 69.9 bits (35), Expect = 9e-09 Identities = 84/98 (85%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 542 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 543 accctgggtgatctatccatgaccaggatgaagcttgg 580 |||| |||||||||| | |||||||||||||| |||| Sbjct: 751 accc-gggtgatctaatcctgaccaggatgaagtttgg 787
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 225 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 284 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 285 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 345 cc 346 || Sbjct: 493 cc 494 Score = 153 bits (77), Expect = 8e-34 Identities = 97/104 (93%) Strand = Plus / Plus Query: 4 gcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 63 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 64 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 416 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 58.0 bits (29), Expect = 3e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 522 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagctt 578 |||||||| ||||||||||||| || | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatcc-gagtgatctaaccatgaccagggtgaagctt 719
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 230 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 289 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 290 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 349 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 350 tgggtagtgaaatagaacgtgaaacc 375 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 1943 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 2002 Query: 81 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 126 ||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 2003 cgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 344 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 345 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 403 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 404 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 463 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 464 tggttaagg 472 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 344 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 345 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 403 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 404 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 463 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 464 tggttaagg 472 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Minus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 156132 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 156073 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaacc 106 |||||||||||||||||||||| ||||||||||| Sbjct: 156072 gagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 77760 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 77819 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaacc 106 |||||||||||||||||||||| ||||||||||| Sbjct: 77820 gagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 77.8 bits (39), Expect = 4e-11 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccga 542 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 543 accctgggtgatctatccatgaccaggatgaagcttgg 580 | ||||| ||||||| |||| ||||| |||||||||| Sbjct: 155526 a-cctggatgatctaatcatggccaggttgaagcttgg 155490 Score = 77.8 bits (39), Expect = 4e-11 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccga 542 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 543 accctgggtgatctatccatgaccaggatgaagcttgg 580 | ||||| ||||||| |||| ||||| |||||||||| Sbjct: 78366 a-cctggatgatctaatcatggccaggttgaagcttgg 78402
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 286 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 402 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 403 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 463 tt 464 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 85 cgaa 88 |||| Sbjct: 238 cgaa 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 496 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 553 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 725 Query: 554 tctatccatgaccaggatgaagcttgg 580 |||| ||||||||||||||||||||| Sbjct: 726 tctaatcatgaccaggatgaagcttgg 752
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 85 cgaaatgggagcagcctaaacc 106 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/90 (86%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 545 cctgggtgatctatccatgaccaggatgaa 574 || |||||||||| |||| |||||||||| Sbjct: 878 cc-gggtgatctaatcatggccaggatgaa 906
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 81 cgagcgaaatgggagcagcctaaac 105 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 105 bits (53), Expect = 2e-19 Identities = 88/97 (90%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 543 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttgg 580 ||| ||||||||||| |||| |||||||||||||||| Sbjct: 708 ccc-gggtgatctattcatggccaggatgaagcttgg 743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 463 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 541 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 761 aaccc-gggtgatctattcatggccaggatgaagcttgg 798 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 85 cgaaatgggagcagcctaaacc 106 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 470 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/89 (84%), Gaps = 5/89 (5%) Strand = Plus / Plus Query: 496 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaaccctgggt 551 |||||||||||||| || |||||| |||||||| ||| ||||||||||||| ||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaaccc-aggt 731 Query: 552 gatctatccatgaccaggatgaagcttgg 580 |||||| |||||||||| |||||||||| Sbjct: 732 gatctaaccatgaccagattgaagcttgg 760
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 286 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 402 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 403 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 463 tt 464 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 85 cgaa 88 |||| Sbjct: 219 cgaa 222 Score = 71.9 bits (36), Expect = 2e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 496 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 553 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 706 Query: 554 tctatccatgaccaggatgaagcttgg 580 |||| ||||||||||||||||||||| Sbjct: 707 tctaatcatgaccaggatgaagcttgg 733
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Minus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 541 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 151680 aaccc-gggtgatctattcatggccaggatgaagcttgg 151643 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 541 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 42523 aaccc-gggtgatctattcatggccaggatgaagcttgg 42560 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 286 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 344 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 402 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 403 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 463 tt 464 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 85 cgaa 88 |||| Sbjct: 238 cgaa 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 496 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 553 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 725 Query: 554 tctatccatgaccaggatgaagcttgg 580 |||| ||||||||||||||||||||| Sbjct: 726 tctaatcatgaccaggatgaagcttgg 752
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 541 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 761 aaccc-gggtgatctattcatggccaggatgaagcttgg 798 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 81 cgagcgaaatgggagcagcctaaac 105 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 105 bits (53), Expect = 2e-19 Identities = 88/97 (90%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 543 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 544 ccctgggtgatctatccatgaccaggatgaagcttgg 580 ||| ||||||||||| |||| |||||||||||||||| Sbjct: 708 ccc-gggtgatctattcatggccaggatgaagcttgg 743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 463 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 541 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 695 aaccc-gggtgatctattcatggccaggatgaagcttgg 732 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 77.8 bits (39), Expect = 4e-11 Identities = 85/97 (87%), Gaps = 5/97 (5%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 541 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 542 aaccctgggtgatctatccatgaccaggatgaagctt 578 ||||| ||||||||||| |||| || ||||||||||| Sbjct: 780 aaccc-gggtgatctattcatggcc-ggatgaagctt 814
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 229 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 288 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 289 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 348 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 349 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 408 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 409 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 457 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 69.9 bits (35), Expect = 9e-09 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 498 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 557 |||| ||||||| || |||||||| ||| || |||| |||||||||||||| ||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctgg-tgatcta 320 Query: 558 tccatgaccaggatgaagcttgg 580 ||||| |||||||||||||||| Sbjct: 321 accatggccaggatgaagcttgg 343
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 346 ccagtgggtagtgaaatagaacgtgaaacc 375 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgact 449 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 69.9 bits (35), Expect = 9e-09 Identities = 84/98 (85%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 542 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 543 accctgggtgatctatccatgaccaggatgaagcttgg 580 |||| |||||||||| |||||||||||||||||||||| Sbjct: 681 accc-gggtgatctaaccatgaccaggatgaagcttgg 717
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 334 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 393 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 394 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 443 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 230 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 289 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 290 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 349 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 350 tgggtagtgaaatagaacgtgaaacc 375 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 192 bits (97), Expect = 9e-46 Identities = 156/173 (90%), Gaps = 7/173 (4%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 475 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 534 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 535 ggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 587 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 681 ggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgggtgaaac 732 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 176 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 235 Query: 81 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 128 ||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 236 cgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 230 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 289 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 290 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 349 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 350 tgggtagtgaaatagaacgtgaaacc 375 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 192 bits (97), Expect = 9e-46 Identities = 156/173 (90%), Gaps = 7/173 (4%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 475 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 534 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 535 ggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 587 |||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 3715 ggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgggtgaaac 3766 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 3210 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 3269 Query: 81 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 128 ||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3270 cgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 346 ccagtgggtagtgaaatagaacgtgaaacc 375 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgact 449 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 69.9 bits (35), Expect = 9e-09 Identities = 84/98 (85%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 542 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 543 accctgggtgatctatccatgaccaggatgaagcttgg 580 |||| |||||||||| |||||||||||||||||||||| Sbjct: 25490 accc-gggtgatctaaccatgaccaggatgaagcttgg 25526
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 229 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 288 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 289 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 348 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 349 gtgggtagtgaaatagaacgtgaaaccgt 377 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 71.9 bits (36), Expect = 2e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 545 cctgggtgatctatccatgaccaggatgaagcttgg 580 || |||||||||| ||||| |||||||||||||||| Sbjct: 309 cc-gggtgatctaaccatgtccaggatgaagcttgg 343 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 422 gtgcctgttgaagaatgagccggcgactcatagg 455 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 344 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 404 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 449 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 146 caacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcgattcccg 205 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||||||||||| |||| |||||||||||| Sbjct: 206 gagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 105 bits (53), Expect = 2e-19 Identities = 89/99 (89%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 541 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 542 aaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 704 aaccc-gggtgatctattcatgaccaggatgaagcttgg 741 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 405 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 406 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 465 ggttaagg 472 |||||||| Sbjct: 800 ggttaagg 807 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 158 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 217 Query: 85 cgaaatgggagcagcctaaacc 106 |||| |||| ||||||||||| Sbjct: 218 cgaaccgggatcagcctaaacc 239 Score = 89.7 bits (45), Expect = 1e-14 Identities = 88/101 (87%), Gaps = 6/101 (5%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 539 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 540 cgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 876 cgaaccc-gggtgatctaatcatgaccaggatgaagcttgg 915
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 101 bits (51), Expect = 3e-18 Identities = 85/94 (90%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 489 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccc 546 |||| |||||||||||||||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| |||||||||||||||||||||| Sbjct: 716 -gggtgatctaaccatgaccaggatgaagcttgg 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 473 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 188 bits (95), Expect = 1e-44 Identities = 111/115 (96%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 477 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 536 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 537 acccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 591 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 65 acccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 118
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Minus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 171352 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 171293 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||||||||| | |||| |||||||||||| Sbjct: 171292 cagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 121574 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 121633 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||||||||| | |||| |||||||||||| Sbjct: 121634 cagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 170874 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 170815 Query: 545 cctgggtgatctatccatgaccaggatgaagcttgg 580 || |||||||||| |||||||||||||||||||||| Sbjct: 170814 cc-gggtgatctaaccatgaccaggatgaagcttgg 170780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 122052 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 122111 Query: 545 cctgggtgatctatccatgaccaggatgaagcttgg 580 || |||||||||| |||||||||||||||||||||| Sbjct: 122112 cc-gggtgatctaaccatgaccaggatgaagcttgg 122146
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 401 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 12 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 165 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 224 Query: 72 tagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||||||||| | |||| |||||||||||| Sbjct: 225 cagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 71.9 bits (36), Expect = 2e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 485 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 544 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 643 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 702 Query: 545 cctgggtgatctatccatgaccaggatgaagcttgg 580 || |||||||||| |||||||||||||||||||||| Sbjct: 703 cc-gggtgatctaaccatgaccaggatgaagcttgg 737
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 344 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 345 cccagtgggtagtgaaatagaacgtgaaaccgt 377 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 153 bits (77), Expect = 8e-34 Identities = 148/169 (87%), Gaps = 7/169 (4%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 473 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 474 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 531 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 532 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 745 tatggacccgaaccc-gggtgatctaaccatgaccaggatgaagcttgg 792 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 25 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 84 ||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 167 tgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcccttagtagcggcgag 226 Query: 85 cgaaatgggagcagcctaaaccg 107 |||||||||| |||||||||||| Sbjct: 227 cgaaatgggaacagcctaaaccg 249
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 344 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 345 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 401 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 402 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 455 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 79 ggcgagcgaaatgggagcagcctaaac 105 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 78/88 (88%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 495 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaaccctgggtg 552 ||||||||||||||| ||||||||| | ||||| | |||||||||||||||| ||| || Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacc-tggatg 701 Query: 553 atctatccatgaccaggatgaagcttgg 580 ||||| ||||| |||||||||||||||| Sbjct: 702 atctaaccatggccaggatgaagcttgg 729
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgt 377 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 119 bits (60), Expect = 1e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 1 caggcaaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 60 |||| |||| |||||| |||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 143 caggtaagagacaacccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaa 202 Query: 61 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 203 cgcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 413 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 109 bits (55), Expect = 1e-20 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 484 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 543 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 544 ccctgggtgatctatccatgaccaggatgaagctt 578 ||| |||||||||| |||||||||||||||||||| Sbjct: 682 ccc-gggtgatctaaccatgaccaggatgaagctt 715
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 346 ccagtgggtagtgaaatagaacgtgaaacc 375 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/87 (90%), Gaps = 4/87 (4%) Strand = Plus / Plus Query: 495 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 551 ||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 717 Query: 552 gatctatccatgaccaggatgaagctt 578 ||||||| |||||||||| |||||||| Sbjct: 718 gatctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 81 cgagcgaaatgggagcagcctaaacc 106 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 346 ccagtgggtagtgaaatagaacgtgaaacc 375 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 81 cgagcgaaatgggagcagcctaaacc 106 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 43/45 (95%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 536 gacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 547 gacccgaaccc-gggtgatctaaccatgaccaggatgaagcttgg 590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgact 449 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 346 ccagtgggtagtgaaatagaacgtgaaacc 375 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/87 (90%), Gaps = 4/87 (4%) Strand = Plus / Plus Query: 495 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 551 ||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 717 Query: 552 gatctatccatgaccaggatgaagctt 578 ||||||| |||||||||| |||||||| Sbjct: 718 gatctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 414 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 472 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 21 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 80 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 81 cgagcgaaatgggagcagcctaaacc 106 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 404 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 405 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 464 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 465 ggttaa 470 |||||| Sbjct: 731 ggttaa 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 26 gaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagc 85 |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 280 gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgagc 339 Query: 86 gaaatgggagcagcctaaacc 106 ||||| | ||||||||||| Sbjct: 340 gaaatcccaacagcctaaacc 360 Score = 61.9 bits (31), Expect = 2e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 522 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 580 ||||||| ||||| |||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 786 tgtcacttcttatccacccgaaccc-gggtgatctaaccatggccaggatgaagcttgg 843
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 229 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 288 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 289 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 348 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 349 gtgggtagtgaaatagaacgtgaaaccgt 377 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 83.8 bits (42), Expect = 6e-13 Identities = 76/86 (88%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 495 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 554 |||||||||||||| |||||||||||| ||||| || | ||||||||||| ||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaaccc-gggtgat 320 Query: 555 ctatccatgaccaggatgaagcttgg 580 ||| ||||| |||||||||||||||| Sbjct: 321 ctaaccatgtccaggatgaagcttgg 346 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 413 tctgaccgcgtgcctgttgaagaatgagccggcga 447 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 346 ccagt-gggtagtgaaatagaacgtgaaaccgt 377 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 141 bits (71), Expect = 3e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 6 aaganacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 65 |||| |||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 66 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 107 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 117 bits (59), Expect = 4e-23 Identities = 139/164 (84%), Gaps = 5/164 (3%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 474 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 475 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 534 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 535 ggacccgaaccctgggtgatctatccatgaccaggatgaagctt 578 |||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 830 ggacccgaaccc-gggtgatctaaccatgaccaggatgaagctt 872
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 532 -gggtgatctaaccatggccaggatgaagcttgg 564 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 79 ggcgagcgaaatgggagcagcctaaacc 106 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 455 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 532 -gggtgatctaaccatggccaggatgaagcttgg 564 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 79 ggcgagcgaaatgggagcagcctaaacc 106 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 455 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 4e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 22 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 81 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 82 gagcgaaatgggagcagcctaaacc 106 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 4e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 79 ggcgagcgaaatgggagcagcctaaacc 106 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 532 -gggtgatctaaccatggccaggatgaagcttgg 564 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 79 ggcgagcgaaatgggagcagcctaaacc 106 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 455 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 4e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 79 ggcgagcgaaatgggagcagcctaaacc 106 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 4e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 79 ggcgagcgaaatgggagcagcctaaacc 106 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 226 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 285 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 286 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 345 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 346 ccagtgggtagtgaaatagaacgtgaaaccgtg 378 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 4e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 487 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 546 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 547 tgggtgatctatccatgaccaggatgaagcttgg 580 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 19 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 78 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 79 ggcgagcgaaatgggagcagcctaaacc 106 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 415 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 462 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,695,908 Number of Sequences: 3902068 Number of extensions: 3695908 Number of successful extensions: 117991 Number of sequences better than 10.0: 26555 Number of HSP's better than 10.0 without gapping: 26382 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 71209 Number of HSP's gapped (non-prelim): 44530 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
