Clone Name | basd3e10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C | 32 | 0.61 | 2 | ATG9_YEAST (Q12142) Autophagy-related protein 9 (Cytoplasm to va... | 29 | 5.2 | 3 | PPR3D_HUMAN (O95685) Protein phosphatase 1 regulatory subunit 3D... | 28 | 6.7 | 4 | TENS1_HUMAN (Q9HBL0) Tensin-1 | 28 | 8.8 | 5 | ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase... | 28 | 8.8 | 6 | TENS1_BOVIN (Q9GLM4) Tensin-1 | 28 | 8.8 |
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>MOAC_STAS1 (Q49ZJ2) Molybdenum cofactor biosynthesis protein C| Length = 162 Score = 32.0 bits (71), Expect = 0.61 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +2 Query: 257 AKSLAVVVP*CTKLPSATALKTFDQLEAQRSFLLHIQT 370 AK+ A ++P C +LP TFD E ++S+ L+IQT Sbjct: 66 AKNTADIIPMCHQLPLTGIDVTFDWQENEQSYTLNIQT 103
>ATG9_YEAST (Q12142) Autophagy-related protein 9 (Cytoplasm to vacuole| targeting protein 7) Length = 997 Score = 28.9 bits (63), Expect = 5.2 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 256 HPLTPLEHSLRVPGKNWYGNPFPSAPTCSGSDLKN 152 H ++P +S R PGKNW N +G D+KN Sbjct: 896 HNISPAIYSTRNPGKNWDNNN-------NGDDIKN 923
>PPR3D_HUMAN (O95685) Protein phosphatase 1 regulatory subunit 3D (Protein| phosphatase 1, regulatory subunit 6) (Protein phosphatase 1-binding subunit R6) Length = 299 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -3 Query: 226 RVPGKNWYGNPFPSAPTCSGSDLKNSPLSRHRSRALPTSP 107 R PG G P P SG D + P+ R+R+LP+SP Sbjct: 42 RPPGSP--GRAPPPTPAPSGCDPRLRPIILRRARSLPSSP 79
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -3 Query: 244 PLEHSLRVPGKNWYGNPFPSAPTCSGSDLKNSPLSRHRSRALPT 113 PL S VPG W G S+ SGS ++ PL++ RS +P+ Sbjct: 727 PLHKSQSVPGA-WPGASPLSSQPLSGSSRQSHPLTQSRSGYIPS 769
>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC| 1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde dehydrogenase 2) (NAGSA dehydrogenase 2) Length = 306 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/21 (61%), Positives = 13/21 (61%) Frame = +2 Query: 347 SFLLHIQTARRSHPDIXFGFP 409 S LL TA R HPD FGFP Sbjct: 76 SRLLDASTAHRIHPDWVFGFP 96
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -3 Query: 244 PLEHSLRVPGKNWYGNPFPSAPTCSGSDLKNSPLSRHRSRALPT 113 PL S VPG W G S+ SGS ++ PL++ RS +P+ Sbjct: 730 PLHKSQSVPGA-WPGASPLSSQPFSGSSCQSHPLTQSRSGYIPS 772 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,449,601 Number of Sequences: 219361 Number of extensions: 848491 Number of successful extensions: 2095 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2068 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2095 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)