Clone Information

BLAST Search Result

Clone Name	basd2o23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KEULE_ARATH (Q9C5X3) SNARE-interacting protein KEULE	276	2e-74
2	SEC1B_ARATH (Q9SZ77) Protein transport Sec1b (AtSec1b)	243	3e-64
3	SEC1A_ARATH (Q9C5P7) Protein transport Sec1a (AtSec1a)	217	2e-56
4	STXB2_MOUSE (Q64324) Syntaxin-binding protein 2 (UNC-18 homolog ...	76	6e-14
5	STXB2_CANFA (Q28288) Syntaxin-binding protein 2 (Unc-18 homolog ...	76	6e-14
6	STXB2_RAT (Q62753) Syntaxin-binding protein 2 (Unc-18 homolog 2)...	74	3e-13
7	STXB2_HUMAN (Q15833) Syntaxin-binding protein 2 (Unc-18 homolog ...	71	2e-12
8	STXB1_RAT (P61765) Syntaxin-binding protein 1 (Unc-18 homolog) (...	70	3e-12
9	STXB1_MOUSE (O08599) Syntaxin-binding protein 1 (Unc-18 homolog)...	70	3e-12
10	STXB1_HUMAN (P61764) Syntaxin-binding protein 1 (Unc-18 homolog)...	70	3e-12
11	STXB1_BOVIN (P61763) Syntaxin-binding protein 1 (Unc-18 homolog)...	70	3e-12
12	UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Un...	65	1e-10
13	STXB3_MOUSE (Q60770) Syntaxin-binding protein 3 (UNC-18 homolog ...	62	9e-10
14	ROP_DROME (Q07327) Protein ROP	62	1e-09
15	STXB3_HUMAN (O00186) Syntaxin-binding protein 3 (UNC-18 homolog ...	61	3e-09
16	SEC1_YEAST (P30619) Protein transport protein SEC1	54	2e-07
17	VPS45_ARATH (O49048) Vacuolar protein-sorting protein 45 homolog...	50	6e-06
18	VPS45_HUMAN (Q9NRW7) Vacuolar protein sorting-associated protein...	47	3e-05
19	VPS45_RAT (O08700) Vacuolar protein sorting-associated protein 4...	47	4e-05
20	VPS45_MOUSE (P97390) Vacuolar protein sorting-associated protein...	47	4e-05
21	YAB3_SCHPO (Q09805) Putative vacuolar protein sorting-associated...	42	0.001
22	SCFD1_HUMAN (Q8WVM8) Sec1 family domain-containing protein 1 (Sy...	40	0.004
23	SCFD1_MOUSE (Q8BRF7) Sec1 family domain-containing protein 1 (Sy...	39	0.008
24	SCFD1_RAT (Q62991) Sec1 family domain-containing protein 1 (Synt...	39	0.008
25	VPS45_YEAST (P38932) Vacuolar protein sorting-associated protein 45	39	0.014
26	SLY1_DROME (Q24179) Sly1 protein homolog	38	0.018
27	SLY1_DROVI (O18637) Sly1 protein homolog	37	0.051
28	SLY1_YEAST (P22213) Protein SLY1 (Suppressor of loss of YPT1 pro...	33	0.57
29	SCXB_BUTOM (P60256) Alpha-neurotoxin Bom alpha-6b	32	1.3
30	YEJB_ECOLI (P0AFU0) Inner membrane ABC transporter permease prot...	32	1.7
31	YEJB_ECO57 (P0AFU1) Inner membrane ABC transporter permease prot...	32	1.7
32	ZN132_HUMAN (P52740) Zinc finger protein 132	32	1.7
33	ZSCA4_HUMAN (Q8NAM6) Zinc finger and SCAN domain-containing prot...	31	2.8
34	ZN682_HUMAN (O95780) Zinc finger protein 682	30	4.8
35	SCXD_BUTOM (P60258) Alpha-neurotoxin Bom alpha-6d	30	6.3
36	SCXA_BUTOM (P60255) Alpha-neurotoxin Bom alpha-6a	30	6.3
37	MMRN2_HUMAN (Q9H8L6) Multimerin-2 precursor (EMILIN-3) (Elastin ...	30	6.3
38	ZN689_RAT (Q99PJ7) Zinc finger protein 689 (Transcription factor...	29	8.2
39	ZN689_MOUSE (Q8BKK5) Zinc finger protein 689	29	8.2
40	ZN689_HUMAN (Q96CS4) Zinc finger protein 689	29	8.2
41	VPS33_ARATH (Q94KJ7) Vacuolar protein-sorting protein 33 homolog...	29	8.2
42	ZN140_HUMAN (P52738) Zinc finger protein 140	29	8.2
43	ZN582_HUMAN (Q96NG8) Zinc finger protein 582	29	8.2

>KEULE_ARATH (Q9C5X3) SNARE-interacting protein KEULE|
          Length = 666

 Score =  276 bits (707), Expect = 2e-74
 Identities = 132/180 (73%), Positives = 157/180 (87%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195
           FSSP+ K+LV  IK+DSS+LPRIGAL EMNLE+F IDSQGFITDHERALE+LF +  E  
Sbjct: 120 FSSPVSKELVGHIKKDSSVLPRIGALREMNLEFFAIDSQGFITDHERALEDLFGDE-ETS 178

Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375
            K +ACLN MA+RI+TVFAS+REFP V YR AK++DASTMTTLRD++PTK+AAG+WN L+
Sbjct: 179 RKGDACLNVMASRIATVFASLREFPAVRYRAAKSLDASTMTTLRDLIPTKLAAGIWNCLA 238

Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNG 555
           K+K SI  FPQTETCELLI+DRS+DQIAP+IHEWTYDAMCHDLL M+GNKYVH + SK+G
Sbjct: 239 KHKQSIENFPQTETCELLILDRSIDQIAPVIHEWTYDAMCHDLLNMEGNKYVHVIPSKSG 298

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>SEC1B_ARATH (Q9SZ77) Protein transport Sec1b (AtSec1b)|
          Length = 662

 Score =  243 bits (620), Expect = 3e-64
 Identities = 114/180 (63%), Positives = 144/180 (80%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195
           FSSP+ + LV  IK+D   + RIG L EMNLEY  +D QGF+T++E ALEELFC+  E  
Sbjct: 120 FSSPVSRSLVNVIKKDMRAMKRIGGLKEMNLEYISMDIQGFVTNNENALEELFCDD-ENH 178

Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375
            + +ACLN +A RI+TV AS++E+P V YR AK +DA+TMTT R+++PTK+AA VWN L+
Sbjct: 179 QRADACLNVVAKRIATVLASLKEYPFVRYRGAKALDATTMTTYRELIPTKLAASVWNCLA 238

Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNG 555
           +YK +I +FPQTETCELLI+DRS+DQIAP+IHEWTYDAMCHDLL M+GNKY HEV SK G
Sbjct: 239 RYKQTIEDFPQTETCELLILDRSIDQIAPLIHEWTYDAMCHDLLNMEGNKYTHEVPSKTG 298

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>SEC1A_ARATH (Q9C5P7) Protein transport Sec1a (AtSec1a)|
          Length = 611

 Score =  217 bits (552), Expect = 2e-56
 Identities = 114/180 (63%), Positives = 134/180 (74%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195
           FSS I K+LV  IK DSS+LPRIGAL E           GF+TDHE+ALE L+ E AE  
Sbjct: 95  FSSTIPKELVNHIKSDSSVLPRIGALRE-----------GFLTDHEQALETLYAEDAENS 143

Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375
             ++ CLN MATRI+TVFAS++E P V YR AK+      T  RD+VP+K+AA +W+ +S
Sbjct: 144 RHFHICLNIMATRIATVFASLKELPFVRYRAAKS------TASRDLVPSKLAAAIWDCIS 197

Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNG 555
           KYK +IP FPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLL M+GNK+V EV SK G
Sbjct: 198 KYK-AIPNFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLDMEGNKHVIEVPSKTG 256

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>STXB2_MOUSE (Q64324) Syntaxin-binding protein 2 (UNC-18 homolog 2) (UNC-18B)|
           (MUSEC1)
          Length = 593

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195
           F+    + L +++ R S +   +  L E++L + P ++Q F  D   +   L+C    G 
Sbjct: 106 FTDTCPEPLFSELGR-SRLAKAVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAG- 163

Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375
            +    L+A+A +I+T+ A+++E+P + YR      A            ++A  V   L+
Sbjct: 164 -ERGRQLDALAQQIATLCATLQEYPSIRYRKGPEDTA------------QLAHAVLAKLN 210

Query: 376 KYKTSIP---EFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546
            +K   P   E P+    +LLI+DR+ D ++P++HE T+ AM +DLL ++ + Y +E + 
Sbjct: 211 AFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRYETTG 270

Query: 547 KNGS 558
            + S
Sbjct: 271 LSES 274

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>STXB2_CANFA (Q28288) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)|
           (Unc18-2)
          Length = 593

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 49/176 (27%), Positives = 89/176 (50%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195
           F+    + L  ++ R S +   +  L E++L + P ++Q F  D   +   L+C    G 
Sbjct: 106 FTDTCPEPLFTELSR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRVGE 164

Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375
                 + A+A +I+T+ A+++E+P + YR    + A     L + V  K+     N   
Sbjct: 165 RARQ--IEALAQQIATLCATLQEYPAIRYRKGPEVTAQ----LANAVLAKL-----NAFK 213

Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543
               S+ E P+    +LLIVDR  D ++P++HE T+ AM +DLL ++ + Y +E +
Sbjct: 214 ADNPSLGEGPEKTRSQLLIVDRGADPVSPLLHELTFQAMAYDLLNIEQDTYRYETT 269

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>STXB2_RAT (Q62753) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)|
           (Unc18-2)
          Length = 594

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 3/184 (1%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195
           F+    + L +++ R S +   +  L E++L + P ++Q F  D   +   L+C    G 
Sbjct: 106 FTDTCPEPLFSELGR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAG- 163

Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375
            +    L+ +A +I+T+ A+++E+P + YR      A            ++A  V   L+
Sbjct: 164 -ERGRQLDVLAQQIATLCATLQEYPSIRYRKGPEDTA------------QLAHAVLAKLN 210

Query: 376 KYKTSIP---EFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546
            +K   P   E P+    +LLI+DR+ D ++P++HE T+ AM +DLL ++ + Y +E + 
Sbjct: 211 AFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLHIEQDTYRYETTG 270

Query: 547 KNGS 558
            + S
Sbjct: 271 LSES 274

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>STXB2_HUMAN (Q15833) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)|
           (Unc18-2)
          Length = 593

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195
           F+    + L +++ R S +   +  L E++L + P ++Q F  D   +   L+C      
Sbjct: 106 FTDTCPEPLFSELGR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRA-- 162

Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375
            +    L  +A +I+T+ A+++E+P + YR      A            ++A  V   L+
Sbjct: 163 EERTRQLEVLAQQIATLCATLQEYPAIRYRKGPEDTA------------QLAHAVLAKLN 210

Query: 376 KYKTSIP---EFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543
            +K   P   E P+    +LLI+DR+ D ++P++HE T+ AM +DLL ++ + Y +E +
Sbjct: 211 AFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRYETT 269

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>STXB1_RAT (P61765) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)|
           (Unc-18-1) (N-Sec1) (rbSec1) (p67)
          Length = 594

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
 Frame = +1

Query: 82  IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261
           I  L+E+N+ + P +SQ +  D   + +  +  S       N  L  +A +I+T+ A+++
Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184

Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432
           E+P V YR     +A     ++D             L  YK   P   E P     +LLI
Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232

Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543
           +DR  D  +P++HE T+ AM +DLL ++ + Y +E S
Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269

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>STXB1_MOUSE (O08599) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)|
           (Unc-18-1)
          Length = 594

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
 Frame = +1

Query: 82  IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261
           I  L+E+N+ + P +SQ +  D   + +  +  S       N  L  +A +I+T+ A+++
Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184

Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432
           E+P V YR     +A     ++D             L  YK   P   E P     +LLI
Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232

Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543
           +DR  D  +P++HE T+ AM +DLL ++ + Y +E S
Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269

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>STXB1_HUMAN (P61764) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)|
           (Unc-18-1) (N-Sec1) (p67)
          Length = 594

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
 Frame = +1

Query: 82  IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261
           I  L+E+N+ + P +SQ +  D   + +  +  S       N  L  +A +I+T+ A+++
Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184

Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432
           E+P V YR     +A     ++D             L  YK   P   E P     +LLI
Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232

Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543
           +DR  D  +P++HE T+ AM +DLL ++ + Y +E S
Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269

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>STXB1_BOVIN (P61763) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)|
           (Unc-18-1) (N-Sec1) (p67)
          Length = 594

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
 Frame = +1

Query: 82  IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261
           I  L+E+N+ + P +SQ +  D   + +  +  S       N  L  +A +I+T+ A+++
Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184

Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432
           E+P V YR     +A     ++D             L  YK   P   E P     +LLI
Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232

Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543
           +DR  D  +P++HE T+ AM +DLL ++ + Y +E S
Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269

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>UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Uncoordinated|
           protein 18)
          Length = 591

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
 Frame = +1

Query: 82  IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261
           I  L E+N+ + P +SQ F  D        +    +G    N  L  +A +I+TV A++ 
Sbjct: 125 IKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSN--LERIAEQIATVCATLG 182

Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432
           E+P + YR     D      L  +V  K+ A        YK   P   E       +L+I
Sbjct: 183 EYPSLRYRA----DFERNVELGHLVEQKLDA--------YKADDPSMGEGADKARSQLII 230

Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKN 552
           +DR  D I P++HE T  AMC+DLL ++ + Y +E    +
Sbjct: 231 IDRGYDAITPLLHELTLQAMCYDLLGIENDVYKYETGGSD 270

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>STXB3_MOUSE (Q60770) Syntaxin-binding protein 3 (UNC-18 homolog 3) (UNC-18C)|
           (MUNC-18-3)
          Length = 592

 Score = 62.4 bits (150), Expect = 9e-10
 Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
 Frame = +1

Query: 55  KRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATR 234
           K  +S    I    E+N+ + P +SQ +  D   A    +       ++    + AMA +
Sbjct: 121 KIKASCSKSIRRCKEINISFIPQESQVYTLDVPDAFYYCYSPDPSNASRKEVVMEAMAEQ 180

Query: 235 ISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTE 414
           I TV A++ E P V Y+ +K +D ++   L  +V  K+          YK       + +
Sbjct: 181 IVTVCATLDENPGVRYK-SKPLDNASK--LAQLVEKKLE-------DYYKIDEKGLIKGK 230

Query: 415 T-CELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNGSA 561
           T  +LLI+DR  D ++ ++HE T+ AM +DLL ++ + Y ++   K   A
Sbjct: 231 TQSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKEKEA 280

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>ROP_DROME (Q07327) Protein ROP|
          Length = 597

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
 Frame = +1

Query: 79  RIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASM 258
           +I  L E+N+ + P + Q F  D     + L+  +       +  +  +A +I+T+ A++
Sbjct: 137 KIKTLKEINIAFLPYECQVFSLDSPDTFQCLYSPAFASIRSKH--IERIAEQIATLCATL 194

Query: 259 REFPRVHYRIA--KTIDASTMTTLRDMVPTKIAAGVWNYLSKYKT---SIPEFPQTETCE 423
            E+P V YR    + ID              +AA V   L  YK    ++ E P+    +
Sbjct: 195 GEYPNVRYRSDWDRNID--------------LAASVQQKLDAYKADDATMGEGPEKARSQ 240

Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKY 528
           LLI+DR  D ++P++HE T  AM +DLL +  + Y
Sbjct: 241 LLILDRGFDCVSPLLHELTLQAMAYDLLPIVNDVY 275

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>STXB3_HUMAN (O00186) Syntaxin-binding protein 3 (UNC-18 homolog 3) (UNC-18C)|
           (UNC-18-3) (Platelet Sec1 protein) (PSP)
          Length = 592

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
 Frame = +1

Query: 55  KRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATR 234
           K  +S    I    E+N+ + P +SQ +  D   A    +          +A +  MA +
Sbjct: 121 KIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQ 180

Query: 235 ISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTE 414
           I TV A++ E P V Y+ +K +D ++   L  +V  K+          YK       + +
Sbjct: 181 IVTVCATLDENPGVRYK-SKPLDNASK--LAQLVEKKLE-------DYYKIDEKSLIKGK 230

Query: 415 T-CELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNGSA 561
           T  +LLI+DR  D ++ ++HE T+ AM +DLL ++ + Y ++   K   A
Sbjct: 231 THSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKGKEA 280

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>SEC1_YEAST (P30619) Protein transport protein SEC1|
          Length = 724

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
 Frame = +1

Query: 103 NLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASM-------R 261
           NLE F     GF     +  E L  E +      N C   + T +  +  S+        
Sbjct: 124 NLESFKPIELGFFVKESQFFETLQMEHSLQVFFNNNCKALIPTNVRKIVGSLVSLCVITG 183

Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTK-----IAAGVWNYLSKYKTSIPEFPQTETCE- 423
           E+P V Y ++  ++         +V        IA      +  Y  + P+FP   T   
Sbjct: 184 EYPIVRYSVSNPVEEEDARNGNAVVNANSLTRSIANAFQIAIDTYARNNPDFPPQNTERP 243

Query: 424 ---LLIVDRSVDQIAPIIHEWTYDAMCHDLLC-MDGNKYVHEVSSKN 552
              L+I DR++D  API+H+++Y AM +DL+  +D  K ++  S++N
Sbjct: 244 RSILIITDRTLDPFAPILHDFSYQAMAYDLVANVDTQKDIYHYSAEN 290

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>VPS45_ARATH (O49048) Vacuolar protein-sorting protein 45 homolog (AtVPS45)|
          Length = 569

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +1

Query: 235 ISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTE 414
           I+ VF +++  P + Y+  +T D +           +IA      + ++++++ +F +TE
Sbjct: 170 IAAVFLALKRRPVIRYQ--RTSDTAK----------RIAHETAKLMYQHESALFDFRRTE 217

Query: 415 TCELLIV-DRSVDQIAPIIHEWTYDAMCHDLLCMDGNK 525
           +  LL+V DR  D + P++++WTY AM H+L+ +  NK
Sbjct: 218 SSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGLQDNK 255

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>VPS45_HUMAN (Q9NRW7) Vacuolar protein sorting-associated protein 45 (h-VPS45)|
           (hlVps45)
          Length = 570

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
 Frame = +1

Query: 139 ITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMT 318
           +  H  +L  L C   +G N   A L+     ++ +  S+++ P + Y+++         
Sbjct: 132 VNPHLFSLNILGC--CQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSE------- 182

Query: 319 TLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIV-DRSVDQIAPIIHEWTYDAMC 495
                   ++A  V   ++K +  + EF +TE   LL++ DR  D I P++++WTY AM 
Sbjct: 183 -----AAKRLAECVKQVITK-EYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMV 236

Query: 496 HDLLCMDGNK 525
           H+LL ++ N+
Sbjct: 237 HELLGINNNR 246

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>VPS45_RAT (O08700) Vacuolar protein sorting-associated protein 45 (rvps45)|
          Length = 570

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +1

Query: 139 ITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMT 318
           +  H  +L  L C   +G N   A L+     ++ +  S+++ P + Y+++         
Sbjct: 132 VNPHLFSLNILGC--CQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSE------- 182

Query: 319 TLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIV-DRSVDQIAPIIHEWTYDAMC 495
                   ++   V   +SK +  + EF +TE   LL++ DR  D I P++++WTY AM 
Sbjct: 183 -----AAKRLGECVKQVISK-EYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMV 236

Query: 496 HDLLCMDGNK 525
           H+LL ++ N+
Sbjct: 237 HELLGINNNR 246

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>VPS45_MOUSE (P97390) Vacuolar protein sorting-associated protein 45 (mVps45)|
          Length = 570

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +1

Query: 139 ITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMT 318
           +  H  +L  L C   +G N   A L+     ++ +  S+++ P + Y+++         
Sbjct: 132 VNPHLFSLNILGC--CQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSE------- 182

Query: 319 TLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIV-DRSVDQIAPIIHEWTYDAMC 495
                   ++   V   +SK +  + EF +TE   LL++ DR  D I P++++WTY AM 
Sbjct: 183 -----AAKRLGECVKQVISK-EYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMV 236

Query: 496 HDLLCMDGNK 525
           H+LL ++ N+
Sbjct: 237 HELLGINNNR 246

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>YAB3_SCHPO (Q09805) Putative vacuolar protein sorting-associated protein|
           C2G11.03c
          Length = 558

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +1

Query: 364 NYLSKYKTSIPEFPQTETCE-LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEV 540
           +Y  ++++ +  F + +T   LL++DR  D I P++ +WTY AM H+L  +D  +     
Sbjct: 192 SYTIQHESQLFNFRKPDTAPILLLLDRKNDPITPLLTQWTYQAMVHELFGIDNGRVSFSN 251

Query: 541 SSKNGSAS 564
           S+ +   S
Sbjct: 252 STSDNEKS 259

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>SCFD1_HUMAN (Q8WVM8) Sec1 family domain-containing protein 1 (Syntaxin-binding|
           protein 1-like 2) (Sly1p)
          Length = 641

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +1

Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546
           L++VDR++D   P+ H WTY A+ HD+L    N+   E SS
Sbjct: 257 LVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESS 297

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>SCFD1_MOUSE (Q8BRF7) Sec1 family domain-containing protein 1 (Syntaxin-binding|
           protein 1-like 2)
          Length = 639

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546
           L++VDR++D   P+ H WTY A+ HD+L    N+   E S+
Sbjct: 255 LVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEEST 295

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>SCFD1_RAT (Q62991) Sec1 family domain-containing protein 1 (Syntaxin-binding|
           protein 1-like 2) (Vesicle transport-related protein
           Ra410) (Sly1p)
          Length = 637

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546
           L++VDR++D   P+ H WTY A+ HD+L    N+   E S+
Sbjct: 253 LVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEEST 293

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>VPS45_YEAST (P38932) Vacuolar protein sorting-associated protein 45|
          Length = 577

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
 Frame = +1

Query: 16  FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHE--RALEELFCESAE 189
           FS+ + K  + ++  +S  L  +  + E+  ++F ++   F  D +    L      S  
Sbjct: 108 FSNIVSKSQLERLA-ESDDLEAVTKVEEIFQDFFILNQDLFSFDLQPREFLSNKLVWSEG 166

Query: 190 GFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNY 369
           G  K   C N++ +    V  S++  P + Y  A  I              ++A  V   
Sbjct: 167 GLTK---CTNSLVS----VLLSLKIKPDIRYEGASKICE------------RLAKEVSYE 207

Query: 370 LSKYKTSIPEFPQTE-TCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGN 522
           + K + +  +FP  + T  LLI+DR+ D I P++  WTY +M ++ + +  N
Sbjct: 208 IGKNERTFFDFPVMDSTPVLLILDRNTDPITPLLQPWTYQSMINEYIGIKRN 259

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>SLY1_DROME (Q24179) Sly1 protein homolog|
          Length = 657

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = +1

Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGN-KYVHEVSSKNGS 558
           LL++DR++D   P+ H W+Y A+ HD+L +  N  YV + ++  G+
Sbjct: 249 LLLLDRNMDLATPLHHTWSYQALVHDVLDLGLNLVYVEDETASAGA 294

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>SLY1_DROVI (O18637) Sly1 protein homolog|
          Length = 656

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +1

Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLL 507
           LL++DR++D   P+ H W+Y A+ HD+L
Sbjct: 249 LLLLDRNMDLATPLHHTWSYQALVHDVL 276

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>SLY1_YEAST (P22213) Protein SLY1 (Suppressor of loss of YPT1 protein 1)|
          Length = 666

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +1

Query: 322 LRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHD 501
           + + + TK+   V N  S   +++      E   L+I+DR++D  +   H W Y  M  D
Sbjct: 227 IAEKLGTKLRDFVINTNSSSTSTLQGNDSLERGVLIILDRNIDFASMFSHSWIYQCMVFD 286

Query: 502 LLCMDGNKYVHEVSSK-NGS 558
           +  +  N     + SK NG+
Sbjct: 287 IFKLSRNTVTIPLESKENGT 306

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>SCXB_BUTOM (P60256) Alpha-neurotoxin Bom alpha-6b|
          Length = 66

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 15/58 (25%), Positives = 23/58 (39%)
 Frame = +3

Query: 195 QQIQCLFECNGYSYIYSICINEGISPCALPHCQDH*CFYNDNTKGHGTHKDCCWCMEL 368
           Q   C+++C   +Y   +C   G       HC+             G H D CWC++L
Sbjct: 8   QNYNCVYDCARDAYCNELCTKNGAKS---GHCE-----------WFGPHGDACWCIDL 51

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>YEJB_ECOLI (P0AFU0) Inner membrane ABC transporter permease protein yejB|
          Length = 364

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 304 ASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP 396
           AS +T ++D +P  I  G+W+ L  Y  SIP
Sbjct: 123 ASVLTLIKDSLPVSITLGLWSTLIIYLVSIP 153

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>YEJB_ECO57 (P0AFU1) Inner membrane ABC transporter permease protein yejB|
          Length = 364

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 304 ASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP 396
           AS +T ++D +P  I  G+W+ L  Y  SIP
Sbjct: 123 ASVLTLIKDSLPVSITLGLWSTLIIYLVSIP 153

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>ZN132_HUMAN (P52740) Zinc finger protein 132|
          Length = 589

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 294 LGNAVVHTGKFPH*CKYCRYTSSH 223
           LGN   HTG+ PH CK C    SH
Sbjct: 162 LGNKKFHTGEIPHVCKECGKAFSH 185

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>ZSCA4_HUMAN (Q8NAM6) Zinc finger and SCAN domain-containing protein 4 (Zinc|
           finger protein 494)
          Length = 433

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 282 VVHTGKFPH*CKYCRYTSSHCIQTSIVFVEAFCTLTEKLFQCPF 151
           ++HTGK P  C  C+ + SH  +T++   E   T  EK + CPF
Sbjct: 360 IIHTGKKPFTCSMCKKSFSH--KTNLRSHERIHT-GEKPYTCPF 400

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>ZN682_HUMAN (O95780) Zinc finger protein 682|
          Length = 498

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 279 VHTGKFPH*CKYCRYTSSHCIQTSIVFVEAFCTLTEKLFQC 157
           +HTGK P+ CK C    +HC   S++ +       EK ++C
Sbjct: 306 IHTGKKPYKCKECGKAFNHC---SLLTIHERTHTGEKPYKC 343

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>SCXD_BUTOM (P60258) Alpha-neurotoxin Bom alpha-6d|
          Length = 70

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 15/58 (25%), Positives = 23/58 (39%)
 Frame = +3

Query: 195 QQIQCLFECNGYSYIYSICINEGISPCALPHCQDH*CFYNDNTKGHGTHKDCCWCMEL 368
           Q   C++ C   +Y   +C   G    A    +   C +       G H D CWC++L
Sbjct: 8   QNYNCVYHCGRDAYCNELCSKNG----AKSRTRGGYCHW------FGPHGDACWCIDL 55

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>SCXA_BUTOM (P60255) Alpha-neurotoxin Bom alpha-6a|
          Length = 66

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +3

Query: 195 QQIQCLFECNGYSYIYSICINEGISPCALPHCQDH*CFYNDNTKGHGTHKDCCWCMEL 368
           Q   C+++C   +Y   +C   G       +C+             G H D CWC++L
Sbjct: 8   QNYNCVYDCARDAYCNDLCTKNGAKS---GYCE-----------WFGPHGDACWCIDL 51

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>MMRN2_HUMAN (Q9H8L6) Multimerin-2 precursor (EMILIN-3) (Elastin microfibril|
           interface located protein 3) (Elastin microfibril
           interfacer 3) (EndoGlyx-1 p125/p140 subunit)
          Length = 949

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 43  VAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNK 201
           + Q++R+ S L    A  E  L+Y   D +  +T H   ++EL+ ES E F++
Sbjct: 373 LGQLQRNLSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSESDETFDQ 425

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>ZN689_RAT (Q99PJ7) Zinc finger protein 689 (Transcription factor HIT-39)|
          Length = 500

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -2

Query: 336 YHVP*CCHC--RSINGLGNAVVHTGKFPH*CKYC 241
           YH P C  C  RS +   +   HTG+ PH C  C
Sbjct: 233 YHCPDCGRCFRRSRSLANHRTTHTGEKPHQCPSC 266

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>ZN689_MOUSE (Q8BKK5) Zinc finger protein 689|
          Length = 500

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -2

Query: 336 YHVP*CCHC--RSINGLGNAVVHTGKFPH*CKYC 241
           YH P C  C  RS +   +   HTG+ PH C  C
Sbjct: 233 YHCPDCGRCFRRSRSLANHRTTHTGEKPHQCPSC 266

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>ZN689_HUMAN (Q96CS4) Zinc finger protein 689|
          Length = 500

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -2

Query: 336 YHVP*CCHC--RSINGLGNAVVHTGKFPH*CKYC 241
           YH P C  C  RS +   +   HTG+ PH C  C
Sbjct: 233 YHCPDCGRCFRRSRSLANHRTTHTGEKPHQCPSC 266

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>VPS33_ARATH (Q94KJ7) Vacuolar protein-sorting protein 33 homolog (AtVPS33)|
          Length = 592

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 403 PQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLL 507
           P+ +T  L+++DR VD + P+  + TY+ +  ++L
Sbjct: 222 PEVDT--LILLDREVDMVTPMCSQLTYEGLIDEIL 254

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>ZN140_HUMAN (P52738) Zinc finger protein 140|
          Length = 457

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 300 NGLGNAVVHTGKFPH*CKYCRYTSSH 223
           N + + ++HTGK PH CK C  T S+
Sbjct: 203 NLVKHQMIHTGKKPHECKDCNKTFSY 228

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>ZN582_HUMAN (Q96NG8) Zinc finger protein 582|
          Length = 517

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 279 VHTGKFPH*CKYCRYTSSHCIQ 214
           +HTG+ P+ CK C    SHC Q
Sbjct: 416 IHTGEKPYECKECGKAFSHCSQ 437


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,093,246
Number of Sequences: 219361
Number of extensions: 1783337
Number of successful extensions: 5614
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5590
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result