Clone Name | basd2o23 |
---|---|
Clone Library Name | barley_pub |
>KEULE_ARATH (Q9C5X3) SNARE-interacting protein KEULE| Length = 666 Score = 276 bits (707), Expect = 2e-74 Identities = 132/180 (73%), Positives = 157/180 (87%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195 FSSP+ K+LV IK+DSS+LPRIGAL EMNLE+F IDSQGFITDHERALE+LF + E Sbjct: 120 FSSPVSKELVGHIKKDSSVLPRIGALREMNLEFFAIDSQGFITDHERALEDLFGDE-ETS 178 Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375 K +ACLN MA+RI+TVFAS+REFP V YR AK++DASTMTTLRD++PTK+AAG+WN L+ Sbjct: 179 RKGDACLNVMASRIATVFASLREFPAVRYRAAKSLDASTMTTLRDLIPTKLAAGIWNCLA 238 Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNG 555 K+K SI FPQTETCELLI+DRS+DQIAP+IHEWTYDAMCHDLL M+GNKYVH + SK+G Sbjct: 239 KHKQSIENFPQTETCELLILDRSIDQIAPVIHEWTYDAMCHDLLNMEGNKYVHVIPSKSG 298
>SEC1B_ARATH (Q9SZ77) Protein transport Sec1b (AtSec1b)| Length = 662 Score = 243 bits (620), Expect = 3e-64 Identities = 114/180 (63%), Positives = 144/180 (80%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195 FSSP+ + LV IK+D + RIG L EMNLEY +D QGF+T++E ALEELFC+ E Sbjct: 120 FSSPVSRSLVNVIKKDMRAMKRIGGLKEMNLEYISMDIQGFVTNNENALEELFCDD-ENH 178 Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375 + +ACLN +A RI+TV AS++E+P V YR AK +DA+TMTT R+++PTK+AA VWN L+ Sbjct: 179 QRADACLNVVAKRIATVLASLKEYPFVRYRGAKALDATTMTTYRELIPTKLAASVWNCLA 238 Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNG 555 +YK +I +FPQTETCELLI+DRS+DQIAP+IHEWTYDAMCHDLL M+GNKY HEV SK G Sbjct: 239 RYKQTIEDFPQTETCELLILDRSIDQIAPLIHEWTYDAMCHDLLNMEGNKYTHEVPSKTG 298
>SEC1A_ARATH (Q9C5P7) Protein transport Sec1a (AtSec1a)| Length = 611 Score = 217 bits (552), Expect = 2e-56 Identities = 114/180 (63%), Positives = 134/180 (74%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195 FSS I K+LV IK DSS+LPRIGAL E GF+TDHE+ALE L+ E AE Sbjct: 95 FSSTIPKELVNHIKSDSSVLPRIGALRE-----------GFLTDHEQALETLYAEDAENS 143 Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375 ++ CLN MATRI+TVFAS++E P V YR AK+ T RD+VP+K+AA +W+ +S Sbjct: 144 RHFHICLNIMATRIATVFASLKELPFVRYRAAKS------TASRDLVPSKLAAAIWDCIS 197 Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNG 555 KYK +IP FPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLL M+GNK+V EV SK G Sbjct: 198 KYK-AIPNFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLDMEGNKHVIEVPSKTG 256
>STXB2_MOUSE (Q64324) Syntaxin-binding protein 2 (UNC-18 homolog 2) (UNC-18B)| (MUSEC1) Length = 593 Score = 76.3 bits (186), Expect = 6e-14 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 3/184 (1%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195 F+ + L +++ R S + + L E++L + P ++Q F D + L+C G Sbjct: 106 FTDTCPEPLFSELGR-SRLAKAVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAG- 163 Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375 + L+A+A +I+T+ A+++E+P + YR A ++A V L+ Sbjct: 164 -ERGRQLDALAQQIATLCATLQEYPSIRYRKGPEDTA------------QLAHAVLAKLN 210 Query: 376 KYKTSIP---EFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546 +K P E P+ +LLI+DR+ D ++P++HE T+ AM +DLL ++ + Y +E + Sbjct: 211 AFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRYETTG 270 Query: 547 KNGS 558 + S Sbjct: 271 LSES 274
>STXB2_CANFA (Q28288) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)| (Unc18-2) Length = 593 Score = 76.3 bits (186), Expect = 6e-14 Identities = 49/176 (27%), Positives = 89/176 (50%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195 F+ + L ++ R S + + L E++L + P ++Q F D + L+C G Sbjct: 106 FTDTCPEPLFTELSR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRVGE 164 Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375 + A+A +I+T+ A+++E+P + YR + A L + V K+ N Sbjct: 165 RARQ--IEALAQQIATLCATLQEYPAIRYRKGPEVTAQ----LANAVLAKL-----NAFK 213 Query: 376 KYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543 S+ E P+ +LLIVDR D ++P++HE T+ AM +DLL ++ + Y +E + Sbjct: 214 ADNPSLGEGPEKTRSQLLIVDRGADPVSPLLHELTFQAMAYDLLNIEQDTYRYETT 269
>STXB2_RAT (Q62753) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)| (Unc18-2) Length = 594 Score = 73.9 bits (180), Expect = 3e-13 Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 3/184 (1%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195 F+ + L +++ R S + + L E++L + P ++Q F D + L+C G Sbjct: 106 FTDTCPEPLFSELGR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAG- 163 Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375 + L+ +A +I+T+ A+++E+P + YR A ++A V L+ Sbjct: 164 -ERGRQLDVLAQQIATLCATLQEYPSIRYRKGPEDTA------------QLAHAVLAKLN 210 Query: 376 KYKTSIP---EFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546 +K P E P+ +LLI+DR+ D ++P++HE T+ AM +DLL ++ + Y +E + Sbjct: 211 AFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLHIEQDTYRYETTG 270 Query: 547 KNGS 558 + S Sbjct: 271 LSES 274
>STXB2_HUMAN (Q15833) Syntaxin-binding protein 2 (Unc-18 homolog 2) (Unc-18B)| (Unc18-2) Length = 593 Score = 70.9 bits (172), Expect = 2e-12 Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 3/179 (1%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGF 195 F+ + L +++ R S + + L E++L + P ++Q F D + L+C Sbjct: 106 FTDTCPEPLFSELGR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRA-- 162 Query: 196 NKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLS 375 + L +A +I+T+ A+++E+P + YR A ++A V L+ Sbjct: 163 EERTRQLEVLAQQIATLCATLQEYPAIRYRKGPEDTA------------QLAHAVLAKLN 210 Query: 376 KYKTSIP---EFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543 +K P E P+ +LLI+DR+ D ++P++HE T+ AM +DLL ++ + Y +E + Sbjct: 211 AFKADTPSLGEGPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRYETT 269
>STXB1_RAT (P61765) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)| (Unc-18-1) (N-Sec1) (rbSec1) (p67) Length = 594 Score = 70.5 bits (171), Expect = 3e-12 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Frame = +1 Query: 82 IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261 I L+E+N+ + P +SQ + D + + + S N L +A +I+T+ A+++ Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184 Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432 E+P V YR +A ++D L YK P E P +LLI Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232 Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543 +DR D +P++HE T+ AM +DLL ++ + Y +E S Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269
>STXB1_MOUSE (O08599) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)| (Unc-18-1) Length = 594 Score = 70.5 bits (171), Expect = 3e-12 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Frame = +1 Query: 82 IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261 I L+E+N+ + P +SQ + D + + + S N L +A +I+T+ A+++ Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184 Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432 E+P V YR +A ++D L YK P E P +LLI Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232 Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543 +DR D +P++HE T+ AM +DLL ++ + Y +E S Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269
>STXB1_HUMAN (P61764) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)| (Unc-18-1) (N-Sec1) (p67) Length = 594 Score = 70.5 bits (171), Expect = 3e-12 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Frame = +1 Query: 82 IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261 I L+E+N+ + P +SQ + D + + + S N L +A +I+T+ A+++ Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184 Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432 E+P V YR +A ++D L YK P E P +LLI Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232 Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543 +DR D +P++HE T+ AM +DLL ++ + Y +E S Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269
>STXB1_BOVIN (P61763) Syntaxin-binding protein 1 (Unc-18 homolog) (Unc-18A)| (Unc-18-1) (N-Sec1) (p67) Length = 594 Score = 70.5 bits (171), Expect = 3e-12 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 3/157 (1%) Frame = +1 Query: 82 IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261 I L+E+N+ + P +SQ + D + + + S N L +A +I+T+ A+++ Sbjct: 127 IKTLTEINIAFLPYESQVYSLDSADSFQSFY--SPHKAQMKNPILERLAEQIATLCATLK 184 Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432 E+P V YR +A ++D L YK P E P +LLI Sbjct: 185 EYPAVRYRGEYKDNALLAQLIQDK------------LDAYKADDPTMGEGPDKARSQLLI 232 Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVS 543 +DR D +P++HE T+ AM +DLL ++ + Y +E S Sbjct: 233 LDRGFDPSSPVLHELTFQAMSYDLLPIENDVYKYETS 269
>UNC18_CAEEL (P34815) Putative acetylcholine regulator unc-18 (Uncoordinated| protein 18) Length = 591 Score = 65.1 bits (157), Expect = 1e-10 Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 3/160 (1%) Frame = +1 Query: 82 IGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMR 261 I L E+N+ + P +SQ F D + +G N L +A +I+TV A++ Sbjct: 125 IKTLKEINIAFTPYESQVFNLDSPDTFFLYYNAQKQGGLTSN--LERIAEQIATVCATLG 182 Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP---EFPQTETCELLI 432 E+P + YR D L +V K+ A YK P E +L+I Sbjct: 183 EYPSLRYRA----DFERNVELGHLVEQKLDA--------YKADDPSMGEGADKARSQLII 230 Query: 433 VDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKN 552 +DR D I P++HE T AMC+DLL ++ + Y +E + Sbjct: 231 IDRGYDAITPLLHELTLQAMCYDLLGIENDVYKYETGGSD 270
>STXB3_MOUSE (Q60770) Syntaxin-binding protein 3 (UNC-18 homolog 3) (UNC-18C)| (MUNC-18-3) Length = 592 Score = 62.4 bits (150), Expect = 9e-10 Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 1/170 (0%) Frame = +1 Query: 55 KRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATR 234 K +S I E+N+ + P +SQ + D A + ++ + AMA + Sbjct: 121 KIKASCSKSIRRCKEINISFIPQESQVYTLDVPDAFYYCYSPDPSNASRKEVVMEAMAEQ 180 Query: 235 ISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTE 414 I TV A++ E P V Y+ +K +D ++ L +V K+ YK + + Sbjct: 181 IVTVCATLDENPGVRYK-SKPLDNASK--LAQLVEKKLE-------DYYKIDEKGLIKGK 230 Query: 415 T-CELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNGSA 561 T +LLI+DR D ++ ++HE T+ AM +DLL ++ + Y ++ K A Sbjct: 231 TQSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKEKEA 280
>ROP_DROME (Q07327) Protein ROP| Length = 597 Score = 61.6 bits (148), Expect = 1e-09 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 5/155 (3%) Frame = +1 Query: 79 RIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASM 258 +I L E+N+ + P + Q F D + L+ + + + +A +I+T+ A++ Sbjct: 137 KIKTLKEINIAFLPYECQVFSLDSPDTFQCLYSPAFASIRSKH--IERIAEQIATLCATL 194 Query: 259 REFPRVHYRIA--KTIDASTMTTLRDMVPTKIAAGVWNYLSKYKT---SIPEFPQTETCE 423 E+P V YR + ID +AA V L YK ++ E P+ + Sbjct: 195 GEYPNVRYRSDWDRNID--------------LAASVQQKLDAYKADDATMGEGPEKARSQ 240 Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKY 528 LLI+DR D ++P++HE T AM +DLL + + Y Sbjct: 241 LLILDRGFDCVSPLLHELTLQAMAYDLLPIVNDVY 275
>STXB3_HUMAN (O00186) Syntaxin-binding protein 3 (UNC-18 homolog 3) (UNC-18C)| (UNC-18-3) (Platelet Sec1 protein) (PSP) Length = 592 Score = 60.8 bits (146), Expect = 3e-09 Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 1/170 (0%) Frame = +1 Query: 55 KRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATR 234 K +S I E+N+ + P +SQ + D A + +A + MA + Sbjct: 121 KIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQ 180 Query: 235 ISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTE 414 I TV A++ E P V Y+ +K +D ++ L +V K+ YK + + Sbjct: 181 IVTVCATLDENPGVRYK-SKPLDNASK--LAQLVEKKLE-------DYYKIDEKSLIKGK 230 Query: 415 T-CELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSSKNGSA 561 T +LLI+DR D ++ ++HE T+ AM +DLL ++ + Y ++ K A Sbjct: 231 THSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKGKEA 280
>SEC1_YEAST (P30619) Protein transport protein SEC1| Length = 724 Score = 54.3 bits (129), Expect = 2e-07 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%) Frame = +1 Query: 103 NLEYFPIDSQGFITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASM-------R 261 NLE F GF + E L E + N C + T + + S+ Sbjct: 124 NLESFKPIELGFFVKESQFFETLQMEHSLQVFFNNNCKALIPTNVRKIVGSLVSLCVITG 183 Query: 262 EFPRVHYRIAKTIDASTMTTLRDMVPTK-----IAAGVWNYLSKYKTSIPEFPQTETCE- 423 E+P V Y ++ ++ +V IA + Y + P+FP T Sbjct: 184 EYPIVRYSVSNPVEEEDARNGNAVVNANSLTRSIANAFQIAIDTYARNNPDFPPQNTERP 243 Query: 424 ---LLIVDRSVDQIAPIIHEWTYDAMCHDLLC-MDGNKYVHEVSSKN 552 L+I DR++D API+H+++Y AM +DL+ +D K ++ S++N Sbjct: 244 RSILIITDRTLDPFAPILHDFSYQAMAYDLVANVDTQKDIYHYSAEN 290
>VPS45_ARATH (O49048) Vacuolar protein-sorting protein 45 homolog (AtVPS45)| Length = 569 Score = 49.7 bits (117), Expect = 6e-06 Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Frame = +1 Query: 235 ISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTE 414 I+ VF +++ P + Y+ +T D + +IA + ++++++ +F +TE Sbjct: 170 IAAVFLALKRRPVIRYQ--RTSDTAK----------RIAHETAKLMYQHESALFDFRRTE 217 Query: 415 TCELLIV-DRSVDQIAPIIHEWTYDAMCHDLLCMDGNK 525 + LL+V DR D + P++++WTY AM H+L+ + NK Sbjct: 218 SSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGLQDNK 255
>VPS45_HUMAN (Q9NRW7) Vacuolar protein sorting-associated protein 45 (h-VPS45)| (hlVps45) Length = 570 Score = 47.4 bits (111), Expect = 3e-05 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 1/130 (0%) Frame = +1 Query: 139 ITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMT 318 + H +L L C +G N A L+ ++ + S+++ P + Y+++ Sbjct: 132 VNPHLFSLNILGC--CQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSE------- 182 Query: 319 TLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIV-DRSVDQIAPIIHEWTYDAMC 495 ++A V ++K + + EF +TE LL++ DR D I P++++WTY AM Sbjct: 183 -----AAKRLAECVKQVITK-EYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMV 236 Query: 496 HDLLCMDGNK 525 H+LL ++ N+ Sbjct: 237 HELLGINNNR 246
>VPS45_RAT (O08700) Vacuolar protein sorting-associated protein 45 (rvps45)| Length = 570 Score = 47.0 bits (110), Expect = 4e-05 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Frame = +1 Query: 139 ITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMT 318 + H +L L C +G N A L+ ++ + S+++ P + Y+++ Sbjct: 132 VNPHLFSLNILGC--CQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSE------- 182 Query: 319 TLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIV-DRSVDQIAPIIHEWTYDAMC 495 ++ V +SK + + EF +TE LL++ DR D I P++++WTY AM Sbjct: 183 -----AAKRLGECVKQVISK-EYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMV 236 Query: 496 HDLLCMDGNK 525 H+LL ++ N+ Sbjct: 237 HELLGINNNR 246
>VPS45_MOUSE (P97390) Vacuolar protein sorting-associated protein 45 (mVps45)| Length = 570 Score = 47.0 bits (110), Expect = 4e-05 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Frame = +1 Query: 139 ITDHERALEELFCESAEGFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMT 318 + H +L L C +G N A L+ ++ + S+++ P + Y+++ Sbjct: 132 VNPHLFSLNILGC--CQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSSE------- 182 Query: 319 TLRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIV-DRSVDQIAPIIHEWTYDAMC 495 ++ V +SK + + EF +TE LL++ DR D I P++++WTY AM Sbjct: 183 -----AAKRLGECVKQVISK-EYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMV 236 Query: 496 HDLLCMDGNK 525 H+LL ++ N+ Sbjct: 237 HELLGINNNR 246
>YAB3_SCHPO (Q09805) Putative vacuolar protein sorting-associated protein| C2G11.03c Length = 558 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +1 Query: 364 NYLSKYKTSIPEFPQTETCE-LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEV 540 +Y ++++ + F + +T LL++DR D I P++ +WTY AM H+L +D + Sbjct: 192 SYTIQHESQLFNFRKPDTAPILLLLDRKNDPITPLLTQWTYQAMVHELFGIDNGRVSFSN 251 Query: 541 SSKNGSAS 564 S+ + S Sbjct: 252 STSDNEKS 259
>SCFD1_HUMAN (Q8WVM8) Sec1 family domain-containing protein 1 (Syntaxin-binding| protein 1-like 2) (Sly1p) Length = 641 Score = 40.4 bits (93), Expect = 0.004 Identities = 18/41 (43%), Positives = 26/41 (63%) Frame = +1 Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546 L++VDR++D P+ H WTY A+ HD+L N+ E SS Sbjct: 257 LVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESS 297
>SCFD1_MOUSE (Q8BRF7) Sec1 family domain-containing protein 1 (Syntaxin-binding| protein 1-like 2) Length = 639 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +1 Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546 L++VDR++D P+ H WTY A+ HD+L N+ E S+ Sbjct: 255 LVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEEST 295
>SCFD1_RAT (Q62991) Sec1 family domain-containing protein 1 (Syntaxin-binding| protein 1-like 2) (Vesicle transport-related protein Ra410) (Sly1p) Length = 637 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +1 Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVSS 546 L++VDR++D P+ H WTY A+ HD+L N+ E S+ Sbjct: 253 LVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEEST 293
>VPS45_YEAST (P38932) Vacuolar protein sorting-associated protein 45| Length = 577 Score = 38.5 bits (88), Expect = 0.014 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Frame = +1 Query: 16 FSSPIQKDLVAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHE--RALEELFCESAE 189 FS+ + K + ++ +S L + + E+ ++F ++ F D + L S Sbjct: 108 FSNIVSKSQLERLA-ESDDLEAVTKVEEIFQDFFILNQDLFSFDLQPREFLSNKLVWSEG 166 Query: 190 GFNKYNACLNAMATRISTVFASMREFPRVHYRIAKTIDASTMTTLRDMVPTKIAAGVWNY 369 G K C N++ + V S++ P + Y A I ++A V Sbjct: 167 GLTK---CTNSLVS----VLLSLKIKPDIRYEGASKICE------------RLAKEVSYE 207 Query: 370 LSKYKTSIPEFPQTE-TCELLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGN 522 + K + + +FP + T LLI+DR+ D I P++ WTY +M ++ + + N Sbjct: 208 IGKNERTFFDFPVMDSTPVLLILDRNTDPITPLLQPWTYQSMINEYIGIKRN 259
>SLY1_DROME (Q24179) Sly1 protein homolog| Length = 657 Score = 38.1 bits (87), Expect = 0.018 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = +1 Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLLCMDGN-KYVHEVSSKNGS 558 LL++DR++D P+ H W+Y A+ HD+L + N YV + ++ G+ Sbjct: 249 LLLLDRNMDLATPLHHTWSYQALVHDVLDLGLNLVYVEDETASAGA 294
>SLY1_DROVI (O18637) Sly1 protein homolog| Length = 656 Score = 36.6 bits (83), Expect = 0.051 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +1 Query: 424 LLIVDRSVDQIAPIIHEWTYDAMCHDLL 507 LL++DR++D P+ H W+Y A+ HD+L Sbjct: 249 LLLLDRNMDLATPLHHTWSYQALVHDVL 276
>SLY1_YEAST (P22213) Protein SLY1 (Suppressor of loss of YPT1 protein 1)| Length = 666 Score = 33.1 bits (74), Expect = 0.57 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = +1 Query: 322 LRDMVPTKIAAGVWNYLSKYKTSIPEFPQTETCELLIVDRSVDQIAPIIHEWTYDAMCHD 501 + + + TK+ V N S +++ E L+I+DR++D + H W Y M D Sbjct: 227 IAEKLGTKLRDFVINTNSSSTSTLQGNDSLERGVLIILDRNIDFASMFSHSWIYQCMVFD 286 Query: 502 LLCMDGNKYVHEVSSK-NGS 558 + + N + SK NG+ Sbjct: 287 IFKLSRNTVTIPLESKENGT 306
>SCXB_BUTOM (P60256) Alpha-neurotoxin Bom alpha-6b| Length = 66 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/58 (25%), Positives = 23/58 (39%) Frame = +3 Query: 195 QQIQCLFECNGYSYIYSICINEGISPCALPHCQDH*CFYNDNTKGHGTHKDCCWCMEL 368 Q C+++C +Y +C G HC+ G H D CWC++L Sbjct: 8 QNYNCVYDCARDAYCNELCTKNGAKS---GHCE-----------WFGPHGDACWCIDL 51
>YEJB_ECOLI (P0AFU0) Inner membrane ABC transporter permease protein yejB| Length = 364 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 304 ASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP 396 AS +T ++D +P I G+W+ L Y SIP Sbjct: 123 ASVLTLIKDSLPVSITLGLWSTLIIYLVSIP 153
>YEJB_ECO57 (P0AFU1) Inner membrane ABC transporter permease protein yejB| Length = 364 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 304 ASTMTTLRDMVPTKIAAGVWNYLSKYKTSIP 396 AS +T ++D +P I G+W+ L Y SIP Sbjct: 123 ASVLTLIKDSLPVSITLGLWSTLIIYLVSIP 153
>ZN132_HUMAN (P52740) Zinc finger protein 132| Length = 589 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 294 LGNAVVHTGKFPH*CKYCRYTSSH 223 LGN HTG+ PH CK C SH Sbjct: 162 LGNKKFHTGEIPHVCKECGKAFSH 185
>ZSCA4_HUMAN (Q8NAM6) Zinc finger and SCAN domain-containing protein 4 (Zinc| finger protein 494) Length = 433 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -2 Query: 282 VVHTGKFPH*CKYCRYTSSHCIQTSIVFVEAFCTLTEKLFQCPF 151 ++HTGK P C C+ + SH +T++ E T EK + CPF Sbjct: 360 IIHTGKKPFTCSMCKKSFSH--KTNLRSHERIHT-GEKPYTCPF 400
>ZN682_HUMAN (O95780) Zinc finger protein 682| Length = 498 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 279 VHTGKFPH*CKYCRYTSSHCIQTSIVFVEAFCTLTEKLFQC 157 +HTGK P+ CK C +HC S++ + EK ++C Sbjct: 306 IHTGKKPYKCKECGKAFNHC---SLLTIHERTHTGEKPYKC 343
>SCXD_BUTOM (P60258) Alpha-neurotoxin Bom alpha-6d| Length = 70 Score = 29.6 bits (65), Expect = 6.3 Identities = 15/58 (25%), Positives = 23/58 (39%) Frame = +3 Query: 195 QQIQCLFECNGYSYIYSICINEGISPCALPHCQDH*CFYNDNTKGHGTHKDCCWCMEL 368 Q C++ C +Y +C G A + C + G H D CWC++L Sbjct: 8 QNYNCVYHCGRDAYCNELCSKNG----AKSRTRGGYCHW------FGPHGDACWCIDL 55
>SCXA_BUTOM (P60255) Alpha-neurotoxin Bom alpha-6a| Length = 66 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/58 (24%), Positives = 23/58 (39%) Frame = +3 Query: 195 QQIQCLFECNGYSYIYSICINEGISPCALPHCQDH*CFYNDNTKGHGTHKDCCWCMEL 368 Q C+++C +Y +C G +C+ G H D CWC++L Sbjct: 8 QNYNCVYDCARDAYCNDLCTKNGAKS---GYCE-----------WFGPHGDACWCIDL 51
>MMRN2_HUMAN (Q9H8L6) Multimerin-2 precursor (EMILIN-3) (Elastin microfibril| interface located protein 3) (Elastin microfibril interfacer 3) (EndoGlyx-1 p125/p140 subunit) Length = 949 Score = 29.6 bits (65), Expect = 6.3 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +1 Query: 43 VAQIKRDSSILPRIGALSEMNLEYFPIDSQGFITDHERALEELFCESAEGFNK 201 + Q++R+ S L A E L+Y D + +T H ++EL+ ES E F++ Sbjct: 373 LGQLQRNLSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSESDETFDQ 425
>ZN689_RAT (Q99PJ7) Zinc finger protein 689 (Transcription factor HIT-39)| Length = 500 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Frame = -2 Query: 336 YHVP*CCHC--RSINGLGNAVVHTGKFPH*CKYC 241 YH P C C RS + + HTG+ PH C C Sbjct: 233 YHCPDCGRCFRRSRSLANHRTTHTGEKPHQCPSC 266
>ZN689_MOUSE (Q8BKK5) Zinc finger protein 689| Length = 500 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Frame = -2 Query: 336 YHVP*CCHC--RSINGLGNAVVHTGKFPH*CKYC 241 YH P C C RS + + HTG+ PH C C Sbjct: 233 YHCPDCGRCFRRSRSLANHRTTHTGEKPHQCPSC 266
>ZN689_HUMAN (Q96CS4) Zinc finger protein 689| Length = 500 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Frame = -2 Query: 336 YHVP*CCHC--RSINGLGNAVVHTGKFPH*CKYC 241 YH P C C RS + + HTG+ PH C C Sbjct: 233 YHCPDCGRCFRRSRSLANHRTTHTGEKPHQCPSC 266
>VPS33_ARATH (Q94KJ7) Vacuolar protein-sorting protein 33 homolog (AtVPS33)| Length = 592 Score = 29.3 bits (64), Expect = 8.2 Identities = 11/35 (31%), Positives = 23/35 (65%) Frame = +1 Query: 403 PQTETCELLIVDRSVDQIAPIIHEWTYDAMCHDLL 507 P+ +T L+++DR VD + P+ + TY+ + ++L Sbjct: 222 PEVDT--LILLDREVDMVTPMCSQLTYEGLIDEIL 254
>ZN140_HUMAN (P52738) Zinc finger protein 140| Length = 457 Score = 29.3 bits (64), Expect = 8.2 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -2 Query: 300 NGLGNAVVHTGKFPH*CKYCRYTSSH 223 N + + ++HTGK PH CK C T S+ Sbjct: 203 NLVKHQMIHTGKKPHECKDCNKTFSY 228
>ZN582_HUMAN (Q96NG8) Zinc finger protein 582| Length = 517 Score = 29.3 bits (64), Expect = 8.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 279 VHTGKFPH*CKYCRYTSSHCIQ 214 +HTG+ P+ CK C SHC Q Sbjct: 416 IHTGEKPYECKECGKAFSHCSQ 437 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,093,246 Number of Sequences: 219361 Number of extensions: 1783337 Number of successful extensions: 5614 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4593 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5590 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)