ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3d22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1096 bits (553), Expect = 0.0 Identities = 556/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120021 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119962 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119961 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 119902 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119901 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119842 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119841 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119782 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119781 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119722 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119721 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119662 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119602 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119601 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119542 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119541 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119482 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 119481 tgagccggcgactcata 119465 Score = 1096 bits (553), Expect = 0.0 Identities = 556/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94873 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 94932 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94933 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 94992 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94993 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95052 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95053 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95112 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95113 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95172 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95173 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95232 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95233 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95292 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95293 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95352 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95412 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 95413 tgagccggcgactcata 95429
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118802 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 118743 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118742 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 118683 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118682 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 118623 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118622 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 118563 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118562 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 118503 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118502 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 118443 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118442 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 118383 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118382 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 118323 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118322 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 118263 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 118262 tgagccggcgactcata 118246
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 873 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 872 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 813 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 753 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 693 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 633 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 632 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 573 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 513 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 453 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 393 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 392 tgagccggcgactcata 376
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119827 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119826 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119767 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119467 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119407 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119347 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 119346 tgagccggcgactcata 119330 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95329 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95389 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95689 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95749 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95750 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95809 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 95810 tgagccggcgactcata 95826
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119827 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119826 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119767 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119467 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119407 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119347 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 119346 tgagccggcgactcata 119330 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95329 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95389 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95689 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95749 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95750 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95809 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 95810 tgagccggcgactcata 95826
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119835 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119776 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119775 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119716 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119656 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119596 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119595 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119536 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119535 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119476 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119475 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119416 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119356 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119355 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119296 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 119295 tgagccggcgactcata 119279 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95215 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95274 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95275 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95334 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95335 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95394 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95395 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95454 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95455 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95514 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95515 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95574 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95575 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95634 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95635 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95694 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95695 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95754 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 95755 tgagccggcgactcata 95771
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507848 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 31507907 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31507908 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 31507967 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507968 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31508027 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508028 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31508087 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508088 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31508147 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508148 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31508207 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508208 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 31508267 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508268 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 31508327 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508328 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 31508387 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 31508388 tgagccggcgactcata 31508404
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84748 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 84689 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84688 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 84629 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84628 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 84569 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84568 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 84509 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84508 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 84449 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84448 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 84389 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84388 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 84329 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84328 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 84269 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84268 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 84209 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 84208 tgagccggcgactcata 84192
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119855 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119796 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119795 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119736 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119676 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119616 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119615 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119556 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119555 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119496 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119436 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119435 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119376 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119375 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119316 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 119315 tgagccggcgactcata 119299 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95263 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95322 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95323 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95382 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95442 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95502 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95503 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95562 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95563 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95622 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95682 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95742 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95743 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95802 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 95803 tgagccggcgactcata 95819
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122312 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 122371 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122372 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 122431 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122432 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 122491 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122492 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 122551 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122552 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 122611 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122612 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 122671 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122672 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 122731 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122732 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 122791 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122792 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 122851 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 122852 tgagccggcgactcata 122868 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14037 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 14096 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14097 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 14156 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14157 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 14216 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14217 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 14276 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14277 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 14336 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 14337 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 14396 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14397 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 14456 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14457 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 14516 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14517 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 14576 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 14577 tgagccggcgactcata 14593
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44846 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 44787 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44786 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 44727 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44726 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 44667 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44666 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 44607 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44606 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 44547 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44546 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 44487 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44486 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 44427 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44426 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 44367 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44366 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 44307 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 44306 tgagccggcgactcata 44290 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20272 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 20331 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20332 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 20391 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20392 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 20451 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20452 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 20511 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20512 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 20571 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20572 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 20631 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20632 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 20691 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20692 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 20751 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20752 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 20811 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 20812 tgagccggcgactcata 20828
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58574 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 58515 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58514 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 58455 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58454 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 58395 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58394 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 58335 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58334 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 58275 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58274 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 58215 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58214 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 58155 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58154 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 58095 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58094 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 58035 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 58034 tgagccggcgactcata 58018
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1475 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 1416 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1415 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 1356 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 1296 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 1236 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 1176 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1175 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 1116 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 1056 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 996 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 936 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 935 tgagccggcgactcata 919
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268197 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9268256 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268257 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9268316 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268317 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9268376 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268377 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9268436 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268437 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9268496 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268497 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9268556 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268557 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9268616 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268617 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9268676 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268677 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9268736 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 9268737 tgagccggcgactcata 9268753 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227697 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9227756 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227757 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9227816 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227817 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9227876 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227877 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9227936 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227937 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9227996 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9228056 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228057 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9228116 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9228176 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9228236 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 9228237 tgagccggcgactcata 9228253 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164286 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9164345 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164346 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9164405 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164406 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9164465 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164466 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9164525 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164526 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9164585 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9164645 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164646 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9164705 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164706 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9164765 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164766 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9164825 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 9164826 tgagccggcgactcata 9164842 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056111 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9056170 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056171 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9056230 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056231 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9056290 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056291 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9056350 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056351 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9056410 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 9056411 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 9056470 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056471 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9056530 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056531 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9056590 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056591 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9056650 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 9056651 tgagccggcgactcata 9056667 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 464 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938182 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19938241 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938242 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19938301 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938302 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19938361 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938362 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19938421 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938422 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19938481 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938482 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19938541 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938542 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 19938601 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938602 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 19938661 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938662 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 19938721 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 19938722 tgagccggcgactcata 19938738 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277249 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10277190 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10277189 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10277130 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277129 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10277070 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277069 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10277010 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277009 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10276950 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276949 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10276890 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276889 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10276830 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276829 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10276770 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276769 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10276710 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 10276709 tgagccggcgactcata 10276693 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387049 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10387108 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10387168 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10387228 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10387288 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10387348 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10387408 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10387468 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10387469 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10387528 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387529 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10387588 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 10387589 tgagccggcgactcata 10387605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 422 agtaccgtgagggaaaggtgaaaagaacccc 452 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttgtgctgctaggcgaagcggttgagtgc 275 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598364 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 31598423 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598424 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 31598483 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598484 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31598543 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598544 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31598603 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598604 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31598663 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598664 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31598723 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 31598783 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598784 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 31598843 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598844 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 31598903 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 31598904 tgagccggcgactcata 31598920
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525680 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 33525739 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525740 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 33525799 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525800 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 33525859 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525860 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 33525919 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525920 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 33525979 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525980 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 33526039 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526040 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 33526099 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526100 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 33526159 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526160 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 33526219 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 33526220 tgagccggcgactcata 33526236 Score = 250 bits (126), Expect = 4e-63 Identities = 132/134 (98%) Strand = Plus / Minus Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 546 gccggcgactcata 559 |||||||||||||| Sbjct: 16677981 gccggcgactcata 16677968 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 440 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 499 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 500 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 549 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 471 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 4 agggcgtagcaagcgacgaaatgcttc 30 ||||| ||||||||||||||||||||| Sbjct: 19455170 agggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47861 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 47802 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47801 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 47742 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47741 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 47682 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47681 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 47622 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47621 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 47562 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47561 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 47502 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47501 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 47442 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47441 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 47382 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47381 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 47322 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 47321 tgagccggcgactcata 47305
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70877 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 70936 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 70937 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 70996 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70997 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 71056 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71057 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 71116 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71117 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 71176 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71177 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 71236 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71237 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 71296 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71297 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 71356 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71357 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 71416 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 71417 tgagccggcgactcata 71433 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123685 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 123626 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123625 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 123566 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123565 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123506 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123505 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 123446 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123445 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 123386 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123385 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 123326 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123325 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 123266 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123265 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 123206 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123205 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 123146 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 123145 tgagccggcgactcata 123129 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99152 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 99211 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99212 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 99271 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99272 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 99331 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99332 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 99391 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99392 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 99451 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99452 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 99511 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99512 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 99571 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99572 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 99631 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99632 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 99691 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 99692 tgagccggcgactcata 99708
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 348 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 408 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 468 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 528 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 588 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 589 tgagccggcgactcata 605
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 165 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 225 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 285 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 345 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 346 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 405 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 465 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 525 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 585 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 586 tgagccggcgactcata 602
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949458 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19949517 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949518 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19949577 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949578 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19949637 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949638 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19949697 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949698 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19949757 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949758 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19949817 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949818 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 19949877 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949878 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 19949937 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949938 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 19949997 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 19949998 tgagccggcgactcata 19950014 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283288 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10283229 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10283228 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10283169 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283168 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10283109 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283108 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10283049 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283048 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10282989 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282988 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10282929 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282928 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10282869 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282868 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10282809 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282808 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10282749 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 10282748 tgagccggcgactcata 10282732 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393088 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10393147 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393148 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10393207 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393208 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10393267 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393268 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10393327 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393328 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10393387 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393388 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10393447 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393448 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10393507 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10393508 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10393567 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393568 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10393627 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 10393628 tgagccggcgactcata 10393644 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttgtgctgctaggcgaagcggttgagtgc 275 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124402 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 124343 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124342 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 124283 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124282 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 124223 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124222 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 124163 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124162 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 124103 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124102 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 124043 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124042 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 123983 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123982 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 123923 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123922 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 123863 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 123862 tgagccggcgactcata 123846 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99829 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 99888 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99889 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 99948 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99949 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 100008 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100009 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 100068 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100069 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 100128 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100129 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 100188 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100189 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 100248 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100249 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 100308 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100309 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 100368 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 100369 tgagccggcgactcata 100385
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119829 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119770 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119769 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119710 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119650 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119590 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119589 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119530 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119529 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119470 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119469 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119410 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119409 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119350 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119349 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119290 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 119289 tgagccggcgactcata 119273 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95210 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95269 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95270 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95329 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95389 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95449 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95509 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95510 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95569 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95629 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95689 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95749 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 95750 tgagccggcgactcata 95766
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140845 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 140904 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140905 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 140964 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140965 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 141024 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141025 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 141084 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141085 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 141144 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 141145 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 141204 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141205 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 141264 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141265 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 141324 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141325 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 141384 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 141385 tgagccggcgactcata 141401
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93441 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93500 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93501 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 93560 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93561 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 93620 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93621 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 93680 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93681 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 93740 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93741 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 93800 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93801 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 93860 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 93861 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 93920 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93921 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 93980 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 93981 tgagccggcgactcata 93997
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27505 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 27564 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27565 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 27624 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27625 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 27684 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27685 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 27744 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27745 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 27804 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27805 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 27864 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27865 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 27924 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27925 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 27984 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27985 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 28044 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 28045 tgagccggcgactcata 28061
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242084 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9242025 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9242024 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9241965 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241964 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9241905 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241904 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9241845 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241844 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9241785 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241784 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9241725 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9241665 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241664 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9241605 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241604 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9241545 Query: 543 tgagccggcgactcata 559 ||||| ||||||||||| Sbjct: 9241544 tgagctggcgactcata 9241528 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 129 actgaaacatcttagtagccagaggaaaagaaag 162 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53297 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 53238 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 53237 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 53178 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53177 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 53118 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53117 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 53058 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53057 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 52998 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 52938 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52937 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 52878 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52877 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 52818 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52817 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 52758 Query: 543 tgagccggcgactcata 559 ||||| ||||||||||| Sbjct: 52757 tgagctggcgactcata 52741
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1072 bits (541), Expect = 0.0 Identities = 553/557 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 65 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 66 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 125 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 185 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 186 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagtaca 245 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 305 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 306 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 365 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 425 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 485 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 486 tgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaa 545 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 546 tgagccggcgactcata 562
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1035 bits (522), Expect = 0.0 Identities = 547/554 (98%), Gaps = 1/554 (0%) Strand = Plus / Minus Query: 6 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123621 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 123562 Query: 66 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 125 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 123561 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 123502 Query: 126 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123501 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 123442 Query: 186 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 245 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123441 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 123382 Query: 246 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 305 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123381 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 123322 Query: 306 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 365 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123321 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 123263 Query: 366 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123262 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 123203 Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123202 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 123143 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123142 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 123083 Query: 546 gccggcgactcata 559 |||||||||||||| Sbjct: 123082 gccggcgactcata 123069 Score = 1035 bits (522), Expect = 0.0 Identities = 547/554 (98%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 6 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99116 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 99175 Query: 66 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 125 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 99176 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 99235 Query: 126 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99236 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 99295 Query: 186 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 245 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99296 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 99355 Query: 246 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 305 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99356 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 99415 Query: 306 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 365 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99416 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 99474 Query: 366 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99475 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 99534 Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99535 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 99594 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99595 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 99654 Query: 546 gccggcgactcata 559 |||||||||||||| Sbjct: 99655 gccggcgactcata 99668
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1035 bits (522), Expect = 0.0 Identities = 547/554 (98%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 6 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5469 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 5528 Query: 66 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 125 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 5529 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 5588 Query: 126 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5589 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 5648 Query: 186 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 245 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5649 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 5708 Query: 246 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 305 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5709 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 5768 Query: 306 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 365 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5769 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 5827 Query: 366 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5828 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 5887 Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5888 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 5947 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5948 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 6007 Query: 546 gccggcgactcata 559 |||||||||||||| Sbjct: 6008 gccggcgactcata 6021
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1035 bits (522), Expect = 0.0 Identities = 547/554 (98%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 6 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 116 Query: 66 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 125 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 117 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 176 Query: 126 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 236 Query: 186 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 245 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 237 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 296 Query: 246 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 305 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 297 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 356 Query: 306 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 365 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 415 Query: 366 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 475 Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 535 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 595 Query: 546 gccggcgactcata 559 |||||||||||||| Sbjct: 596 gccggcgactcata 609
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 999 bits (504), Expect = 0.0 Identities = 510/512 (99%) Strand = Plus / Plus Query: 48 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 107 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 108 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 168 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 228 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 288 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 347 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 348 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 408 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 468 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 528 gtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcata 512
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 983 bits (496), Expect = 0.0 Identities = 505/508 (99%) Strand = Plus / Plus Query: 52 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 111 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 232 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 292 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 351 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 352 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 412 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 472 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 532 ctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcata 508
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 934 bits (471), Expect = 0.0 Identities = 474/475 (99%) Strand = Plus / Plus Query: 85 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 145 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 205 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 265 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 324 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 325 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 385 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 445 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 505 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 475
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 910 bits (459), Expect = 0.0 Identities = 534/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139535 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 139476 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 139475 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 139417 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139416 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 139357 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139356 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 139297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||||| Sbjct: 139296 agcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagta 139237 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139236 gccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139177 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139176 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 139117 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139116 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 139057 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 139056 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 139000 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 138999 tgagccggcgactcata 138983 Score = 910 bits (459), Expect = 0.0 Identities = 534/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110410 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 110469 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 110470 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 110528 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110529 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 110588 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110589 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 110648 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||||| Sbjct: 110649 agcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagta 110708 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110709 gccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110768 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110769 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 110828 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110829 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 110888 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 110889 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 110945 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 110946 tgagccggcgactcata 110962
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 910 bits (459), Expect = 0.0 Identities = 465/467 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 109 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 169 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 229 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 289 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 349 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 409 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 469 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 910 bits (459), Expect = 0.0 Identities = 534/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127813 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 127754 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 127753 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 127695 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 127694 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 127635 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127634 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 127575 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 127574 agcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 127515 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127514 gccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 127455 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127454 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 127395 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 127394 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 127335 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 127334 ---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 127278 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 127277 tgagccggcgactcata 127261 Score = 910 bits (459), Expect = 0.0 Identities = 534/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107109 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 107168 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 107169 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 107227 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107228 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 107287 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107288 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 107347 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 107348 agcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 107407 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107408 gccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 107467 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107468 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 107527 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 107528 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 107587 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 107588 ---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 107644 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 107645 tgagccggcgactcata 107661
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 910 bits (459), Expect = 0.0 Identities = 534/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134172 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 134113 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 134112 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 134054 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134053 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 133994 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133993 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 133934 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||||| Sbjct: 133933 agcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagta 133874 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133873 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 133814 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133813 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 133754 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 133753 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 133694 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 133693 ---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 133637 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 133636 tgagccggcgactcata 133620 Score = 910 bits (459), Expect = 0.0 Identities = 534/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103799 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 103858 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 103859 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 103917 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103918 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103977 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103978 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104037 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||||| Sbjct: 104038 agcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagta 104097 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104098 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 104157 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104158 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104217 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104218 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104277 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 104278 ---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 104334 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 104335 tgagccggcgactcata 104351
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 894 bits (451), Expect = 0.0 Identities = 532/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142057 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 141998 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 141997 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 141939 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141938 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 141879 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141878 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 141819 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||||| Sbjct: 141818 agcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagta 141759 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141758 accgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 141699 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141698 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 141639 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 141638 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 141579 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 141578 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 141522 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 141521 tgagccggcgactcata 141505 Score = 894 bits (451), Expect = 0.0 Identities = 532/557 (95%), Gaps = 4/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111600 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 111659 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 111660 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 111718 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111719 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 111778 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111779 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 111838 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||||| Sbjct: 111839 agcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagta 111898 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111899 accgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 111958 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111959 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 112018 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 112019 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 112078 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 112079 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 112135 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 112136 tgagccggcgactcata 112152
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 884 bits (446), Expect = 0.0 Identities = 531/557 (95%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134930 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 134871 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 134870 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 134812 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134811 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 134752 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134751 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 134692 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||||| Sbjct: 134691 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagta 134632 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct: 134631 gccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgt 134572 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134571 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 134512 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 134511 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 134452 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134451 ---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaa 134399 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 134398 tgagccggcgactcata 134382 Score = 884 bits (446), Expect = 0.0 Identities = 531/557 (95%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105352 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105411 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105412 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105470 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105471 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105530 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105531 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105590 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||||| Sbjct: 105591 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagta 105650 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct: 105651 gccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgt 105710 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105711 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 105770 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105771 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 105830 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 105831 ---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaa 105883 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 105884 tgagccggcgactcata 105900
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 880 bits (444), Expect = 0.0 Identities = 531/557 (95%), Gaps = 6/557 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136540 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136481 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 136480 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 136422 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136421 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136362 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136361 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136302 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 136301 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 136242 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136241 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 136182 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136181 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 136122 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 136121 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 136062 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | || | ||||||||||||||||||||||||| Sbjct: 136061 ---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaa 136007 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 136006 tgagccggcgactcata 135990 Score = 880 bits (444), Expect = 0.0 Identities = 531/557 (95%), Gaps = 6/557 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105885 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105944 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 105945 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 106003 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106004 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106063 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106064 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106123 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 106124 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 106183 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106184 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106243 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106244 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 106303 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106304 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 106363 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | || | ||||||||||||||||||||||||| Sbjct: 106364 ---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaa 106418 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 106419 tgagccggcgactcata 106435
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 862 bits (435), Expect = 0.0 Identities = 529/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132724 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 132665 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 132664 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 132606 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132605 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132546 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132545 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 132486 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 132485 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 132426 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132425 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132366 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132365 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 132306 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132305 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 132246 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 132245 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 132190 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 132189 tgagccggcgactcata 132173 Score = 862 bits (435), Expect = 0.0 Identities = 529/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104154 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 104213 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 104214 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 104272 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104273 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104332 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104333 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104392 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 104393 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 104452 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104453 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104512 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104513 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104572 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104573 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104632 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 104633 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 104688 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 104689 tgagccggcgactcata 104705
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 862 bits (435), Expect = 0.0 Identities = 529/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132947 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 132888 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 132887 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 132829 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132828 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132769 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132768 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 132709 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 132708 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 132649 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132648 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132589 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132588 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 132529 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132528 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 132469 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 132468 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 132413 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 132412 tgagccggcgactcata 132396 Score = 862 bits (435), Expect = 0.0 Identities = 529/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103817 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 103876 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 103877 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 103935 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103936 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103995 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103996 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 104055 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 104056 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 104115 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104116 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104175 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104176 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104235 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104236 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104295 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 104296 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 104351 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 104352 tgagccggcgactcata 104368
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 862 bits (435), Expect = 0.0 Identities = 529/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132717 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 132658 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 132657 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 132599 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132598 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132539 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132538 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 132479 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 132478 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 132419 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132418 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132359 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132358 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 132299 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132298 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 132239 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 132238 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 132183 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 132182 tgagccggcgactcata 132166 Score = 862 bits (435), Expect = 0.0 Identities = 529/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104152 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 104211 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 104212 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 104270 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104271 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104330 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104331 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104390 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 104391 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 104450 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104451 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104510 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104511 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104570 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104571 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104630 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 104631 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 104686 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 104687 tgagccggcgactcata 104703
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 854 bits (431), Expect = 0.0 Identities = 528/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131616 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 131557 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 131556 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 131498 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131497 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 131438 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131437 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 131378 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 131377 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 131318 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131317 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 131258 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131257 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 131198 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 131197 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 131138 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 131137 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 131082 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 131081 tgagccggcgactcata 131065 Score = 854 bits (431), Expect = 0.0 Identities = 528/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103019 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 103078 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 103079 tcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 103137 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103138 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103197 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103198 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 103257 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 103258 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 103317 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103318 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 103377 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103378 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 103437 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 103438 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 103497 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 103498 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 103553 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 103554 tgagccggcgactcata 103570
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 854 bits (431), Expect = 0.0 Identities = 528/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133908 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 133849 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 133848 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 133790 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133789 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 133730 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 133729 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 133670 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 133669 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 133610 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133609 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 133550 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133549 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 133490 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 133489 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 133430 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 133429 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 133374 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 133373 tgagccggcgactcata 133357 Score = 854 bits (431), Expect = 0.0 Identities = 528/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104741 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 104800 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 104801 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 104859 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104860 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104919 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 104920 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 104979 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 104980 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 105039 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105040 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 105099 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105100 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 105159 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105160 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 105219 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 105220 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 105275 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 105276 tgagccggcgactcata 105292
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 846 bits (427), Expect = 0.0 Identities = 527/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140309 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 140250 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 140249 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 140191 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140190 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 140131 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140130 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 140071 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||||| Sbjct: 140070 agcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagta 140011 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140010 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139951 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139950 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 139891 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139890 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 139831 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | || ||||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 139830 ---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaa 139775 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 139774 tgagccggcgactcata 139758 Score = 846 bits (427), Expect = 0.0 Identities = 527/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109751 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 109810 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 109811 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 109869 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109870 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 109929 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109930 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 109989 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||||| Sbjct: 109990 agcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagta 110049 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110050 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110109 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110110 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 110169 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110170 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 110229 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | || ||||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 110230 ---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaa 110285 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 110286 tgagccggcgactcata 110302
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 846 bits (427), Expect = 0.0 Identities = 527/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 50 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 109 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 110 tcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacc 168 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 288 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 289 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 348 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 408 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 468 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 469 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 528 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 529 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 584 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 585 tgagccggcgactcata 601
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 846 bits (427), Expect = 0.0 Identities = 527/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 478 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 537 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 593 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 594 tgagccggcgactcata 610
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136249 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136190 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 136189 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 136131 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136130 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136071 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136070 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136011 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 136010 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 135951 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135950 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 135891 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135890 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135831 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135830 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135771 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135770 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 135716 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 135715 atgagccggcgactcata 135698 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106381 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 106440 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106441 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106499 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106500 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106559 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106560 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106619 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 106620 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 106679 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106680 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 106739 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106740 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 106799 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 106800 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106859 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106860 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106914 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 106915 atgagccggcgactcata 106932
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136887 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136828 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 136827 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 136769 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136768 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136709 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136708 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136649 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 136648 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 136589 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 136588 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 136529 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136528 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 136469 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 136468 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 136409 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 136408 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 136354 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 136353 atgagccggcgactcata 136336 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 106729 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106730 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106788 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106789 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106848 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106849 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106908 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 106909 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 106968 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106969 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 107028 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107029 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 107088 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 107089 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 107148 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 107149 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 107203 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 107204 atgagccggcgactcata 107221
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 1634 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 1635 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 1693 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1694 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 1753 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1754 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 1813 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 1814 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 1873 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1874 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 1933 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1934 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 1993 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 1994 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 2053 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 2054 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 2108 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 2109 atgagccggcgactcata 2126
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135495 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135436 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135435 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135377 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135376 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135317 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135316 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135257 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 135256 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135197 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135196 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135137 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135136 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135077 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135076 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135017 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135016 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 134962 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 134961 atgagccggcgactcata 134944 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105541 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105600 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105601 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105659 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105660 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105719 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105720 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105779 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 105780 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 105839 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105840 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 105899 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105900 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 105959 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 105960 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106019 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106020 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106074 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 106075 atgagccggcgactcata 106092
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135630 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135571 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135570 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135512 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135511 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135452 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135392 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 135391 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135332 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135331 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135272 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135271 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135212 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135211 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135152 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135151 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 135097 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 135096 atgagccggcgactcata 135079 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105713 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105772 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105773 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105831 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105832 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105891 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105892 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105951 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 105952 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 106011 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106012 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 106071 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106072 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 106131 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 106132 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106191 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106192 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106246 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 106247 atgagccggcgactcata 106264
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135628 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135569 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135568 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135510 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135509 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135450 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135449 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135390 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 135389 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135330 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135329 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135270 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135269 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135210 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135209 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135150 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135149 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 135095 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 135094 atgagccggcgactcata 135077 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105710 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105769 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105770 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105828 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105829 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105888 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105889 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105948 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 105949 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 106008 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106009 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 106068 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106069 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 106128 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 106129 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106188 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106189 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106243 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 106244 atgagccggcgactcata 106261
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135540 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135481 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135480 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135422 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135421 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135362 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135361 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135302 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 135301 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135242 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135241 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135182 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135181 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135122 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135121 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135062 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135061 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 135007 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 135006 atgagccggcgactcata 134989 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105588 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105647 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105648 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105706 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105707 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105766 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105767 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105826 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 105827 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 105886 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105887 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 105946 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105947 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 106006 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 106007 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106066 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106067 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106121 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 106122 atgagccggcgactcata 106139
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136247 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 136188 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 136187 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 136129 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136128 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136069 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136068 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136009 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 136008 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 135949 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135948 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 135889 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135888 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135829 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135828 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135769 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135768 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 135714 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 135713 atgagccggcgactcata 135696 Score = 835 bits (421), Expect = 0.0 Identities = 527/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106379 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 106438 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106439 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106497 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106498 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106557 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106558 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106617 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 106618 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 106677 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106678 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 106737 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106738 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 106797 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 106798 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106857 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106858 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106912 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 106913 atgagccggcgactcata 106930
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 831 bits (419), Expect = 0.0 Identities = 525/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106056 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 106115 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 106116 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 106174 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106175 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106234 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106235 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106294 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||| Sbjct: 106295 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 106354 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106355 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106414 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106415 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 106474 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106475 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 106534 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 106535 ---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaa 106590 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 106591 tgagccggcgactcata 106607 Score = 781 bits (394), Expect = 0.0 Identities = 524/560 (93%), Gaps = 8/560 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 135853 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 135794 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 135793 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 135735 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135734 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135675 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-aatac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135674 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatac 135615 Query: 242 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 301 |||||| ||||||||||||||||| || ||||| |||||||||||||| | |||||||| Sbjct: 135614 aagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagt 135555 Query: 302 agccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct: 135554 agccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaatccc 135495 Query: 361 gtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135494 gtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 135435 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135434 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135375 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||| ||||||||||||||| | | | | |||||||||||||||||||||| Sbjct: 135374 ccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaa 135319 Query: 540 gaatgagccggcgactcata 559 |||||||||||||||||||| Sbjct: 135318 gaatgagccggcgactcata 135299
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 831 bits (419), Expect = 0.0 Identities = 521/553 (94%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| ||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 112 tcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 170 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 230 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 231 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 290 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || |||||| ||||||||||||||||||||| |||||||| |||||| | ||||||||| Sbjct: 291 agtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtccagta 350 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 351 gccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatcccgt 410 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 470 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 471 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 530 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 531 ---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaa 587 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 588 tgagccggcgact 600
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 831 bits (419), Expect = 0.0 Identities = 525/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 136129 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 136070 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 136069 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 136011 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136010 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135951 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135950 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135891 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||| Sbjct: 135890 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 135831 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135830 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 135771 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135770 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 135711 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135710 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 135651 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 135650 ---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaa 135595 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 135594 tgagccggcgactcata 135578 Score = 831 bits (419), Expect = 0.0 Identities = 525/557 (94%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 106278 aagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagat 106337 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 106338 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 106396 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106456 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106516 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||| Sbjct: 106517 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 106576 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106577 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106636 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106637 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 106696 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106697 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 106756 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 106757 ---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaa 106812 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 106813 tgagccggcgactcata 106829
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 40 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 99 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 100 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 160 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 220 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 280 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 339 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 340 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 400 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 460 tagtga 465 |||||| Sbjct: 421 tagtga 426
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 827 bits (417), Expect = 0.0 Identities = 526/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135978 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggat 135919 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135918 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135860 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135859 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135800 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135799 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135740 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 135739 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 135680 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135679 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 135620 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135560 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135559 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135500 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135499 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 135445 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 135444 atgagccggcgactcata 135427 Score = 827 bits (417), Expect = 0.0 Identities = 526/558 (94%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106160 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggat 106219 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 106220 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 106278 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106279 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106338 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106339 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106398 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 106399 agcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 106458 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106459 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 106518 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106519 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 106578 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 106579 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106638 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106639 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106693 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 106694 atgagccggcgactcata 106711
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 827 bits (417), Expect = 0.0 Identities = 523/554 (94%), Gaps = 7/554 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135507 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 135448 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 135447 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 135389 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135388 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135329 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135328 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135269 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 135268 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 135209 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135208 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 135149 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135148 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 135089 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135088 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135029 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 135028 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 134974 Query: 542 atgagccggcgact 555 |||||||||||||| Sbjct: 134973 atgagccggcgact 134960 Score = 827 bits (417), Expect = 0.0 Identities = 523/554 (94%), Gaps = 7/554 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105555 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105614 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 105615 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 105673 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105674 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105733 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105734 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105793 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||| Sbjct: 105794 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagt 105853 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105854 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 105913 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105914 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 105973 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 105974 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 106033 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 106034 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 106088 Query: 542 atgagccggcgact 555 |||||||||||||| Sbjct: 106089 atgagccggcgact 106102
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 825 bits (416), Expect = 0.0 Identities = 526/558 (94%), Gaps = 6/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 51 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 110 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 111 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 169 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 taacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 229 Query: 183 gc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 241 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 289 Query: 242 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 301 |||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 290 aagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtccagt 349 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 350 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 409 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 410 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagt 469 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 470 agtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaacc 529 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | | | |||||||||||||||||||||||| Sbjct: 530 g---taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaaga 585 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 586 atgagccggcgactcata 603
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 815 bits (411), Expect = 0.0 Identities = 523/557 (93%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131740 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccggagat 131681 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 131680 tcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 131622 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131621 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 131562 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131561 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 131502 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||||| Sbjct: 131501 agcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccagta 131442 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131441 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 131382 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131381 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 131322 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 131321 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 131262 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | ||||| |||||||||||||||| | || | ||||||||||||||||||||||| Sbjct: 131261 ---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaa 131206 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 131205 tgagccggcgactcata 131189 Score = 815 bits (411), Expect = 0.0 Identities = 523/557 (93%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 101705 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccggagat 101764 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 101765 tcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 101823 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101824 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 101883 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101884 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 101943 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||||| Sbjct: 101944 agcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccagta 102003 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102004 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 102063 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102064 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 102123 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 102124 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 102183 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | ||||| |||||||||||||||| | || | ||||||||||||||||||||||| Sbjct: 102184 ---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaa 102239 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 102240 tgagccggcgactcata 102256
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 811 bits (409), Expect = 0.0 Identities = 524/558 (93%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139453 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 139394 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| Sbjct: 139393 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacc 139335 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139334 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 139275 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139274 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 139215 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||| Sbjct: 139214 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 139155 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139154 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139095 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139094 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 139035 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139034 gtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 138975 Query: 483 tgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaaga 541 | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 138974 ---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaaga 138920 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 138919 atgagccggcgactcata 138902 Score = 811 bits (409), Expect = 0.0 Identities = 524/558 (93%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109644 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 109703 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| Sbjct: 109704 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacc 109762 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109763 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 109822 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 109823 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 109882 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||| Sbjct: 109883 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 109942 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109943 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110002 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110003 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 110062 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110063 gtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 110122 Query: 483 tgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaaga 541 | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 110123 ---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaaga 110177 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 110178 atgagccggcgactcata 110195
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 811 bits (409), Expect = 0.0 Identities = 525/558 (94%), Gaps = 8/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 85 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 86 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 144 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 204 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 264 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||||||||| Sbjct: 265 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagt 323 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 324 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 383 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 443 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 444 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 503 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 504 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 558 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 559 atgagccggcgactcata 576
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 811 bits (409), Expect = 0.0 Identities = 481/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Minus Query: 5 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130482 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 130423 Query: 65 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 124 || ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||| Sbjct: 130422 ccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacctg 130364 Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130363 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130304 Query: 185 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 244 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130303 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 130244 Query: 245 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 304 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 130243 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 130184 Query: 305 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130183 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 130124 Query: 365 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 424 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130123 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 130064 Query: 425 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 484 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 130063 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 130006 Query: 485 ctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 130005 -taagctcccaagcagtgggagg 129984 Score = 811 bits (409), Expect = 0.0 Identities = 481/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 5 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101974 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 102033 Query: 65 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 124 || ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||| Sbjct: 102034 ccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacctg 102092 Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102093 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 102152 Query: 185 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 244 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 102153 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 102212 Query: 245 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 304 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 102213 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 102272 Query: 305 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102273 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 102332 Query: 365 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 424 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102333 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 102392 Query: 425 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 484 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 102393 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 102450 Query: 485 ctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 102451 -taagctcccaagcagtgggagg 102472 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 129928 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 102528
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 807 bits (407), Expect = 0.0 Identities = 525/560 (93%), Gaps = 7/560 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139662 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 139603 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 139602 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 139544 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139543 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 139484 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139483 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 139424 Query: 243 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||||| Sbjct: 139423 agcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagt 139364 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139363 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 139304 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139303 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagt 139244 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 139243 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 139184 Query: 482 gtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaa 539 | | |||||||||||||||||||| || | | |||||||||||||||||||||| Sbjct: 139183 g---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaa 139127 Query: 540 gaatgagccggcgactcata 559 |||||||||||||||||||| Sbjct: 139126 gaatgagccggcgactcata 139107 Score = 807 bits (407), Expect = 0.0 Identities = 525/560 (93%), Gaps = 7/560 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109637 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 109696 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 109697 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 109755 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109756 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 109815 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109816 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 109875 Query: 243 agcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||||| Sbjct: 109876 agcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagt 109935 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 109936 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 109995 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 109996 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagt 110055 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 110056 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 110115 Query: 482 gtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaa 539 | | |||||||||||||||||||| || | | |||||||||||||||||||||| Sbjct: 110116 g---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaa 110172 Query: 540 gaatgagccggcgactcata 559 |||||||||||||||||||| Sbjct: 110173 gaatgagccggcgactcata 110192
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 799 bits (403), Expect = 0.0 Identities = 481/505 (95%), Gaps = 4/505 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46303 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 46362 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 46363 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 46421 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46422 tggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcccgtagta 46481 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46482 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 46541 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||| Sbjct: 46542 agcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccagta 46601 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46602 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 46661 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46662 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 46721 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 46722 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 46781 Query: 483 tgctgagctcccaagcagtgggagg 507 | ||||| |||||||||||||| Sbjct: 46782 ---taagctctcaagcagtgggagg 46803 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 46859
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 799 bits (403), Expect = 0.0 Identities = 481/505 (95%), Gaps = 4/505 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| Sbjct: 478 ctaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg 537 Query: 483 tgctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 799 bits (403), Expect = 0.0 Identities = 481/505 (95%), Gaps = 4/505 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||| Sbjct: 478 ctaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg 537 Query: 483 tgctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||| ||||||||||||||||||| | ||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcata 622
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 791 bits (399), Expect = 0.0 Identities = 480/505 (95%), Gaps = 4/505 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||| Sbjct: 478 ataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg 537 Query: 483 tgctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatga 545 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 791 bits (399), Expect = 0.0 Identities = 480/505 (95%), Gaps = 4/505 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| Sbjct: 478 ataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg 537 Query: 483 tgctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 44.1 bits (22), Expect = 0.49 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||| |||||||||||| || |||||||| |||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcata 621
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 791 bits (399), Expect = 0.0 Identities = 480/505 (95%), Gaps = 4/505 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgtagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 478 ataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 537 Query: 483 tgctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 60.0 bits (30), Expect = 8e-06 Identities = 40/42 (95%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcata 621
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 789 bits (398), Expect = 0.0 Identities = 401/402 (99%) Strand = Plus / Plus Query: 158 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 218 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 278 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 337 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 338 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 398 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 458 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 402
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 787 bits (397), Expect = 0.0 Identities = 521/558 (93%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 142828 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagat 142769 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 142768 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 142710 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 142650 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 142590 Query: 243 agcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||| Sbjct: 142589 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 142530 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 142529 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 142470 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142469 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 142410 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 142409 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 142350 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | ||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 142349 g---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 142295 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 142294 atgagccggcgactcata 142277 Score = 787 bits (397), Expect = 0.0 Identities = 521/558 (93%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110500 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagat 110559 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 110560 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 110618 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110619 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 110678 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110679 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 110738 Query: 243 agcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||| Sbjct: 110739 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 110798 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110799 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 110858 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110859 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 110918 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 110919 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 110978 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | ||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 110979 g---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 111033 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 111034 atgagccggcgactcata 111051
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 785 bits (396), Expect = 0.0 Identities = 519/557 (93%), Gaps = 6/557 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4282 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4341 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4342 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4400 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4401 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4460 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4461 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 4520 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||| Sbjct: 4521 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 4580 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4581 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 4640 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4641 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4700 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 4701 gtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg 4760 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 4761 ---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 4815 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 4816 tgagccggcgactcata 4832
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 785 bits (396), Expect = 0.0 Identities = 519/557 (93%), Gaps = 6/557 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 23643 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 23584 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 23583 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 23525 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23524 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 23465 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23464 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 23405 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||| Sbjct: 23404 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 23345 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23344 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 23285 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 23284 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 23225 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 23224 gtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg 23165 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 23164 ---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 23110 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 23109 tgagccggcgactcata 23093
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 160 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 220 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 280 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 339 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 340 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 400 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 460 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 400
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 160 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 220 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 280 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 339 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 340 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 400 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 460 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 400
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 785 bits (396), Expect = 0.0 Identities = 520/557 (93%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4610 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4611 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4669 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || || ||||||||||||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4969 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4970 gtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg 5029 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||| Sbjct: 5030 ---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 5083 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 5084 tgagccggcgactcata 5100
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 785 bits (396), Expect = 0.0 Identities = 520/557 (93%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4610 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4611 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4669 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||| || || || ||||||||||||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4969 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4970 gtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg 5029 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||| Sbjct: 5030 ---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 5083 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 5084 tgagccggcgactcata 5100
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 161 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 221 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 281 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 340 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 341 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 401 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 461 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcata 399
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 161 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 221 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 281 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 340 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 341 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 401 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 461 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcata 402
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 781 bits (394), Expect = 0.0 Identities = 517/555 (93%), Gaps = 6/555 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86313 aagggcgtggtaagcgacgaaatgcttcggggagttgaaaatgagcatagatccggagat 86372 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||| ||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 86373 tcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaagagacaacc 86431 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86432 tggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagta 86491 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc--aata 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86492 gtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcccaata 86551 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||| |||||||||||||||||||||||||| | ||||||||||||| | ||||||| Sbjct: 86552 taagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccag 86611 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 86612 tagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatccc 86671 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86672 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 86731 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 86732 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 86791 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 86792 cg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaag 86848 Query: 541 aatgagccggcgact 555 ||||||||||||||| Sbjct: 86849 aatgagccggcgact 86863
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 781 bits (394), Expect = 0.0 Identities = 517/555 (93%), Gaps = 6/555 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 88399 aagggcgtggtaagcgacgaaatgcttcggggagttgaaaattagcatagatccggagat 88458 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||| Sbjct: 88459 tcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaagagacaacc 88517 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88518 tggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagta 88577 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca--ata 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 88578 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcacaata 88637 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||| |||||||||||||||||||||||||| | ||||||||||||| | ||||||| Sbjct: 88638 taagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccag 88697 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 88698 tagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatccc 88757 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88758 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 88817 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 88818 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 88877 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 88878 cg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaag 88934 Query: 541 aatgagccggcgact 555 ||||||||||||||| Sbjct: 88935 aatgagccggcgact 88949
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 779 bits (393), Expect = 0.0 Identities = 396/397 (99%) Strand = Plus / Plus Query: 163 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 223 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 283 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 342 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 343 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 403 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 463 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 523 accgcgtgcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcata 397
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 777 bits (392), Expect = 0.0 Identities = 509/544 (93%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 100 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 159 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| Sbjct: 160 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacc 218 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 219 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 278 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 279 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 338 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||| Sbjct: 339 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 398 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 399 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 458 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 518 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 519 gtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 578 Query: 483 tgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaaga 541 | ||||||||||||| |||||| | || | |||||||||||||||||||||||| Sbjct: 579 ---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaaga 633 Query: 542 atga 545 |||| Sbjct: 634 atga 637
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 775 bits (391), Expect = 0.0 Identities = 511/544 (93%), Gaps = 9/544 (1%) Strand = Plus / Plus Query: 19 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 78 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1833 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaac 1892 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1893 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccat 1951 Query: 139 cttagtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatg 197 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1952 cttagtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatg 2011 Query: 198 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgct 256 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 2012 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgct 2071 Query: 257 aggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 315 ||||||||| | || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 2072 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 2131 Query: 316 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2132 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 2191 Query: 376 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2192 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 2251 Query: 436 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 495 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 2252 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 2308 Query: 496 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 2309 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 2366 Query: 556 cata 559 |||| Sbjct: 2367 cata 2370
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 773 bits (390), Expect = 0.0 Identities = 519/558 (93%), Gaps = 8/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 547 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagat 606 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 607 tcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 665 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 725 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 785 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||||| Sbjct: 786 agcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagta 845 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 846 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 905 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 906 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagccaaata 965 Query: 423 gta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 966 gtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 1025 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | ||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct: 1026 g---taagctctcaagcagtgggaggagacag---gctctgaccgcgtgcctgttgaaga 1079 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 1080 atgagccggcgactcata 1097
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 763 bits (385), Expect = 0.0 Identities = 516/557 (92%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 59 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| Sbjct: 478 ataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg 537 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | ||||| |||||||||||||| || || |||||| ||||||||||||||| || Sbjct: 538 ---taagctctcaagcagtgggaggagacag---gctctgaacgcgtgcctgttgaaaaa 591 Query: 543 tgagccggcgactcata 559 ||||||||||||||||| Sbjct: 592 tgagccggcgactcata 608
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 761 bits (384), Expect = 0.0 Identities = 522/561 (93%), Gaps = 9/561 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 131820 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 131761 Query: 63 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 121 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 131760 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 131702 Query: 122 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131701 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 131642 Query: 182 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131641 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 131582 Query: 242 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 299 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 131581 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 131522 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131521 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 131462 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131461 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 131402 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 131401 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 131342 Query: 480 ccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttga 538 ||| | |||||||||||||||||||| || | || ||||||||||||||||||||| Sbjct: 131341 ccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttga 131286 Query: 539 agaatgagccggcgactcata 559 ||||||||||||||||||||| Sbjct: 131285 agaatgagccggcgactcata 131265 Score = 761 bits (384), Expect = 0.0 Identities = 522/561 (93%), Gaps = 9/561 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 103574 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 103633 Query: 63 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 121 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 103634 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 103692 Query: 122 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 181 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103693 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 103752 Query: 182 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103753 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 103812 Query: 242 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 299 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 103813 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 103872 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103873 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 103932 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103933 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 103992 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 103993 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 104052 Query: 480 ccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttga 538 ||| | |||||||||||||||||||| || | || ||||||||||||||||||||| Sbjct: 104053 ccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttga 104108 Query: 539 agaatgagccggcgactcata 559 ||||||||||||||||||||| Sbjct: 104109 agaatgagccggcgactcata 104129
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 761 bits (384), Expect = 0.0 Identities = 521/559 (93%), Gaps = 12/559 (2%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 210 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 211 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 269 Query: 123 tggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattcccgtagt 181 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 270 tggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattcccgtagt 329 Query: 182 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 241 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 330 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaatac 388 Query: 242 aagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 389 aagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaaagtccag 448 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 508 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 568 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||| ||||| ||| ||||||||||||| |||||| Sbjct: 569 tagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaatagaacatgaaac 627 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | ||||||||||||||||||||||| Sbjct: 628 cg---taagctcccaagcagtgggaggcca----gggctctgaccgcgtgcctgttgaag 680 Query: 541 aatgagccggcgactcata 559 ||||||||||||||||||| Sbjct: 681 aatgagccggcgactcata 699
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 751 bits (379), Expect = 0.0 Identities = 506/544 (93%), Gaps = 7/544 (1%) Strand = Plus / Minus Query: 17 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 76 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 52621 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 52562 Query: 77 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 136 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 52561 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 52503 Query: 137 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 196 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52502 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 52443 Query: 197 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 256 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 52442 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 52383 Query: 257 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 315 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 52382 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 52323 Query: 316 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 375 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52322 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 52263 Query: 376 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 435 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 52262 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 52203 Query: 436 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 495 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 52202 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 52146 Query: 496 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 52145 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 52088 Query: 556 cata 559 |||| Sbjct: 52087 cata 52084 Score = 751 bits (379), Expect = 0.0 Identities = 506/544 (93%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 17 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 76 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 37207 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 37266 Query: 77 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 136 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 37267 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 37325 Query: 137 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 196 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 37326 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 37385 Query: 197 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 256 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 37386 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 37445 Query: 257 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 315 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 37446 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 37505 Query: 316 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 375 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 37506 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 37565 Query: 376 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 435 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 37566 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 37625 Query: 436 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 495 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 37626 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 37682 Query: 496 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 37683 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 37740 Query: 556 cata 559 |||| Sbjct: 37741 cata 37744
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 751 bits (379), Expect = 0.0 Identities = 506/544 (93%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 17 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 76 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 4135 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 4194 Query: 77 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 136 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 4195 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 4253 Query: 137 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 196 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4254 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 4313 Query: 197 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 256 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 4314 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 4373 Query: 257 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 315 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 4374 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 4433 Query: 316 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 375 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4434 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 4493 Query: 376 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 435 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 4494 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 4553 Query: 436 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 495 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 4554 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 4610 Query: 496 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 4611 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 4668 Query: 556 cata 559 |||| Sbjct: 4669 cata 4672
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 749 bits (378), Expect = 0.0 Identities = 518/563 (92%), Gaps = 10/563 (1%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 128395 aagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagat 128336 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 128335 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 128277 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 128276 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 128217 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 236 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128216 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 128157 Query: 237 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 296 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 128156 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 128097 Query: 297 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 356 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 128096 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 128037 Query: 357 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128036 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 127977 Query: 417 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 476 |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 127976 gaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatg 127917 Query: 477 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 536 |||||| | |||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 127916 aaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgtt 127860 Query: 537 gaagaatgagccggcgactcata 559 || |||||||||||||||||||| Sbjct: 127859 gaggaatgagccggcgactcata 127837 Score = 749 bits (378), Expect = 0.0 Identities = 518/563 (92%), Gaps = 10/563 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 95052 aagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagat 95111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 95112 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 95170 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 95171 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 95230 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 236 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95231 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 95290 Query: 237 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 296 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 95291 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 95350 Query: 297 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 356 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 95351 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 95410 Query: 357 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95411 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95470 Query: 417 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 476 |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 95471 gaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatg 95530 Query: 477 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 536 |||||| | |||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 95531 aaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgtt 95587 Query: 537 gaagaatgagccggcgactcata 559 || |||||||||||||||||||| Sbjct: 95588 gaggaatgagccggcgactcata 95610
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 743 bits (375), Expect = 0.0 Identities = 511/553 (92%), Gaps = 5/553 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 116158 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagat 116099 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||||| Sbjct: 116098 tcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaacc 116040 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 116039 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagta 115980 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | | Sbjct: 115979 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaata 115921 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||| Sbjct: 115920 agtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagta 115861 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 115860 accgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgt 115801 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115800 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 115741 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 115740 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 115681 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 115680 ---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaa 115624 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 115623 tgagccggcgact 115611 Score = 743 bits (375), Expect = 0.0 Identities = 511/553 (92%), Gaps = 5/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 85962 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagat 86021 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||||| Sbjct: 86022 tcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaacc 86080 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 86081 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagta 86140 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | | Sbjct: 86141 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaata 86199 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||| Sbjct: 86200 agtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagta 86259 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 86260 accgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgt 86319 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86320 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 86379 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 86380 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 86439 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 86440 ---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaa 86496 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 86497 tgagccggcgact 86509
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 743 bits (375), Expect = 0.0 Identities = 510/553 (92%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatggatccggagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| ||| |||| |||||||||||| Sbjct: 112 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaacc 170 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 171 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 230 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | Sbjct: 231 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagta 290 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||| |||||||||||| ||||| | | ||||| ||||||| | ||||||||| Sbjct: 291 ggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccagta 350 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 351 gccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccgt 410 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 411 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 470 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 471 gtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg 530 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 531 ---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaa 587 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 588 tgagccggcgact 600
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 737 bits (372), Expect = 0.0 Identities = 511/554 (92%), Gaps = 5/554 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2095 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 2154 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 2155 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 2213 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2214 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 2273 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 2274 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 2333 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 2334 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 2393 Query: 303 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 2394 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 2453 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2454 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 2513 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 2514 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 2573 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 2574 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 2630 Query: 542 atgagccggcgact 555 |||||||||||||| Sbjct: 2631 atgagccggcgact 2644
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 737 bits (372), Expect = 0.0 Identities = 475/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Minus Query: 56 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 115 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 116 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 176 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 236 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 294 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 355 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 414 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 415 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 474 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 475 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 534 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 535 ttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcata 14
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 737 bits (372), Expect = 0.0 Identities = 511/554 (92%), Gaps = 5/554 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118098 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 118039 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 118038 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 117980 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117979 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 117920 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 117919 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 117860 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 117859 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 117800 Query: 303 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 117799 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 117740 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 117739 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 117680 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 117679 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 117620 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 117619 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 117563 Query: 542 atgagccggcgact 555 |||||||||||||| Sbjct: 117562 atgagccggcgact 117549 Score = 737 bits (372), Expect = 0.0 Identities = 511/554 (92%), Gaps = 5/554 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 90004 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 90063 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 90064 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 90122 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 90182 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 90183 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 90242 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 90243 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 90302 Query: 303 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 90303 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 90362 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 90363 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 90422 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 90423 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 90482 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 90483 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 90539 Query: 542 atgagccggcgact 555 |||||||||||||| Sbjct: 90540 atgagccggcgact 90553
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 728 bits (367), Expect = 0.0 Identities = 508/553 (91%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 3941 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 4000 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 4001 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 4059 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4060 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 4119 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 4120 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 4179 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 4180 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 4239 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 4240 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 4299 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4300 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 4359 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 4360 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 4419 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 4420 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 4476 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 4477 tgagccggcgact 4489
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 728 bits (367), Expect = 0.0 Identities = 508/553 (91%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 35 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagat 94 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||||||||||| |||||||||||| || |||||||||||||| Sbjct: 95 tcccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaagagacaacc 153 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| Sbjct: 154 tggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcgtagta 213 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | | Sbjct: 214 gcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagctaaaga 273 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||| |||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 274 agcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 333 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct: 334 accgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatcccgt 393 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 454 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 513 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| ||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 514 ---taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaa 570 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 571 tgagccggcgact 583
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 728 bits (367), Expect = 0.0 Identities = 508/553 (91%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 51 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 110 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 111 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 169 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 229 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 289 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 290 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 349 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 409 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 469 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 470 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 529 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 530 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 586 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 587 tgagccggcgact 599
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 728 bits (367), Expect = 0.0 Identities = 508/553 (91%), Gaps = 4/553 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 151194 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 151135 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 151134 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 151076 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 151075 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 151016 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 151015 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 150956 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 150955 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 150896 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 150895 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 150836 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150835 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 150776 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 150775 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 150716 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 150715 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 150659 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 150658 tgagccggcgact 150646 Score = 728 bits (367), Expect = 0.0 Identities = 508/553 (91%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 117472 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 117531 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 117532 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 117590 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117591 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 117650 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 117651 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 117710 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 117711 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 117770 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 117771 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 117830 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117831 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 117890 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 117891 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 117950 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 117951 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 118007 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 118008 tgagccggcgact 118020
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 728 bits (367), Expect = 0.0 Identities = 508/553 (91%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 51 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagat 110 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||||| |||||||| || || | |||||||||||| Sbjct: 111 tcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaact 169 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 229 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 289 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 290 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 349 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 409 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 469 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 470 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 529 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 530 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 586 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 587 tgagccggcgact 599
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 726 bits (366), Expect = 0.0 Identities = 511/557 (91%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatggatccggagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| ||||||||||||||| |||||||| ||| || |||||||||||||| Sbjct: 112 tcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagagacaacc 170 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 171 cggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcgtagta 230 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||| Sbjct: 231 gcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagctataca 290 Query: 243 a----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 298 | || ||| ||||||||||||||| ||||||| | |||||| |||||| | ||||| Sbjct: 291 aataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgagagtcc 350 Query: 299 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 |||| |||||||||| || | |||||||||| |||||||||||||||||||||||||||| Sbjct: 351 agtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtggaatc 410 Query: 359 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 470 Query: 419 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 478 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 471 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 530 Query: 479 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 538 |||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 531 accg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttga 587 Query: 539 agaatgagccggcgact 555 ||||||||||||||||| Sbjct: 588 agaatgagccggcgact 604
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 724 bits (365), Expect = 0.0 Identities = 477/511 (93%), Gaps = 5/511 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 59 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccggagat 118 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 119 tcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaacc 177 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagta 357 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||| ||||| ||| ||||||||| ||| |||||||| Sbjct: 478 gtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg 536 Query: 483 tgctgagctcccaagcagtgggaggggaaag 513 | ||||| |||||||||||||| ||||| Sbjct: 537 ---taagctctcaagcagtgggaggagaaag 564
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 724 bits (365), Expect = 0.0 Identities = 446/470 (94%), Gaps = 6/470 (1%) Strand = Plus / Plus Query: 91 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 150 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 151 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 211 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 269 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 270 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 329 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 330 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 390 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 449 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 450 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 509 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 481
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 714 bits (360), Expect = 0.0 Identities = 431/451 (95%), Gaps = 4/451 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 48 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 107 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 108 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 166 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 226 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 286 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| || | | |||||||||||||| | ||||||||| Sbjct: 287 agcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtccagta 346 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 347 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 406 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| Sbjct: 407 gtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtgaagta 464 Query: 423 gtaccgtgagggaaaggtgaaaagaaccccc 453 |||||||||||||| |||| ||||||||||| Sbjct: 465 gtaccgtgagggaagggtg-aaagaaccccc 494
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 714 bits (360), Expect = 0.0 Identities = 508/554 (91%), Gaps = 5/554 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 146508 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagat 146449 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||||| Sbjct: 146448 tcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaacc 146390 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 146389 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 146330 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 146329 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 146270 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||||| Sbjct: 146269 agcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagta 146210 Query: 303 gccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccg 361 ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||| Sbjct: 146209 gccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccg 146150 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 146149 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagt 146090 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 146089 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 146030 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | ||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 146029 g---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaaga 145973 Query: 542 atgagccggcgact 555 |||||||||||||| Sbjct: 145972 atgagccggcgact 145959 Score = 714 bits (360), Expect = 0.0 Identities = 508/554 (91%), Gaps = 5/554 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| Sbjct: 111954 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagat 112013 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||||| Sbjct: 112014 tcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaacc 112072 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112073 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 112132 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 112133 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 112192 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||||| Sbjct: 112193 agcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagta 112252 Query: 303 gccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccg 361 ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||| Sbjct: 112253 gccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccg 112312 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 112313 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagt 112372 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 112373 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 112432 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | ||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 112433 g---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaaga 112489 Query: 542 atgagccggcgact 555 |||||||||||||| Sbjct: 112490 atgagccggcgact 112503
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 49 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 108 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 109 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 169 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 229 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 289 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 348 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 349 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 409 ccgata 414 |||||| Sbjct: 361 ccgata 366
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 708 bits (357), Expect = 0.0 Identities = 421/441 (95%), Gaps = 1/441 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 87 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 88 tcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagagacaacc 146 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 147 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 206 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 266 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| ||||||||||||||||||| || ||||||||||||||| ||||||||| Sbjct: 267 agcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtccagta 326 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 327 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 386 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 446 Query: 423 gtaccgtgagggaaaggtgaa 443 |||||||||||||| |||||| Sbjct: 447 gtaccgtgagggaagggtgaa 467
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 708 bits (357), Expect = 0.0 Identities = 517/558 (92%), Gaps = 18/558 (3%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 682 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 623 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||| ||| |||| |||||||||||||| |||||||||||||| | Sbjct: 622 tcccgaataggtca--ctt---gactg-ctgctgaatccatg-gcaggcaagagaca--c 572 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaa-gcaaaagcgattcccgtagt 181 | |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 571 t-gcga--tga-acatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagt 516 Query: 182 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 515 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatac 456 Query: 242 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 301 |||||| |||||||||||||||||||| |||||| |||||||||||||| | |||||||| Sbjct: 455 aagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagt 396 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 395 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 336 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 276 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 275 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 216 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||||||||||||||||||| | | | |||||||||||||||||||||||| Sbjct: 215 g---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaaga 160 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 159 atgagccggcgactcata 142
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 674 bits (340), Expect = 0.0 Identities = 352/356 (98%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123419 aagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagat 123360 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123359 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 123300 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123299 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123240 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123239 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 123180 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123179 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 123120 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123119 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 408 bits (206), Expect = e-111 Identities = 209/210 (99%) Strand = Plus / Minus Query: 350 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 530 gcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||| |||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcata 122611
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 674 bits (340), Expect = 0.0 Identities = 352/356 (98%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12825960 aagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagat 12825901 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12825900 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 12825841 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825840 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 12825781 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825780 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 12825721 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825720 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 12825661 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825660 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 408 bits (206), Expect = e-111 Identities = 209/210 (99%) Strand = Plus / Minus Query: 350 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 530 gcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||| |||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcata 12825152 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 530 gcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcata 75097 Score = 343 bits (173), Expect = 4e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75661 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 75602 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 75601 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 75542 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75541 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Plus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 530 gcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcata 382441 Score = 343 bits (173), Expect = 4e-91 Identities = 176/177 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381877 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 381936 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 381937 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 381996 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381997 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 530 gcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcata 113188 Score = 343 bits (173), Expect = 4e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113752 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 113693 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 113692 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 113633 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113632 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 530 gcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcata 367870 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 530 gcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcata 184475 Score = 343 bits (173), Expect = 4e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368434 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 368375 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 368374 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 368315 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368314 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 343 bits (173), Expect = 4e-91 Identities = 176/177 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185039 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 184980 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 184979 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 184920 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184919 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 636 bits (321), Expect = e-179 Identities = 503/558 (90%), Gaps = 8/558 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||| |||| || ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 51 aagggtgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccgtagat 110 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| || ||||||| | ||||| |||| |||||||| ||||| ||||||||||| Sbjct: 111 tcccgaatggggtaacctttcacactgc-tgctcaatccatgggcaggaaagagacaacc 169 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcgattcccatagta 229 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggttgtgggagagcaataaa 289 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| ||||||||||||||||| | || | || |||||||||||||| |||||||||| Sbjct: 290 agcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctagatggcgaaagtccagt 349 Query: 302 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 361 || | |||||||||||| || |||||||||||||||||||||| |||||| ||||||| Sbjct: 350 agtcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacgtgtaatcccg 409 Query: 362 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 421 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| Sbjct: 410 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccaatagtaaagt 469 Query: 422 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 481 ||||||||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||| Sbjct: 470 agtaccgtgagggaagggtgaaaagaa-ccccattggggagtgaaatagaacatgaaacc 528 Query: 482 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 541 | | |||| ||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 529 g---taagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 583 Query: 542 atgagccggcgactcata 559 |||||||||||||||||| Sbjct: 584 atgagccggcgactcata 601
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 76 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 135 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 136 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 196 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 255 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 256 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 315 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 316 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 375 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 376 gaccaccttgcaaggctaaatactcctgggtg 407 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 529 bits (267), Expect = e-147 Identities = 270/271 (99%) Strand = Plus / Plus Query: 289 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 348 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 349 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 409 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 469 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 529 tgcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcata 271
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 507 bits (256), Expect = e-140 Identities = 349/375 (93%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 2650 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 2709 Query: 63 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 121 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 2710 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 2768 Query: 122 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2769 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 2828 Query: 182 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2829 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 2888 Query: 242 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 299 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 2889 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 2948 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 2949 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 3007 Query: 360 cgtgtgaatcagcaa 374 ||||||||||||||| Sbjct: 3008 cgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 507 bits (256), Expect = e-140 Identities = 349/375 (93%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 905 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 964 Query: 63 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 121 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 965 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 1023 Query: 122 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 181 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 1083 Query: 182 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1084 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 1143 Query: 242 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 299 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 1144 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 1203 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1204 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 1262 Query: 360 cgtgtgaatcagcaa 374 ||||||||||||||| Sbjct: 1263 cgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 505 bits (255), Expect = e-140 Identities = 479/553 (86%), Gaps = 3/553 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 143970 aagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagat 144029 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| Sbjct: 144030 tcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacc 144089 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 144090 cggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagta 144149 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 144150 acggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgag 144209 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||||| Sbjct: 144210 ggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagta 144269 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||| ||| | |||||| | |||| |||| |||||||||||||||| |||||||| Sbjct: 144270 gccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgt 144329 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| | Sbjct: 144330 gtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagca 144389 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 144390 gtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 144449 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||| Sbjct: 144450 ---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaa 144506 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 144507 tgagccggcgact 144519 Score = 505 bits (255), Expect = e-140 Identities = 479/553 (86%), Gaps = 3/553 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 88881 aagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagat 88822 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| Sbjct: 88821 tcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacc 88762 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 88761 cggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagta 88702 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 88701 acggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgag 88642 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||||| Sbjct: 88641 ggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagta 88582 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||| ||| | |||||| | |||| |||| |||||||||||||||| |||||||| Sbjct: 88581 gccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgt 88522 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 |||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| | Sbjct: 88521 gtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagca 88462 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 88461 gtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 88402 Query: 483 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 542 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||| Sbjct: 88401 ---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaa 88345 Query: 543 tgagccggcgact 555 ||||||||||||| Sbjct: 88344 tgagccggcgact 88332
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 478 bits (241), Expect = e-131 Identities = 244/245 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 243 agcgt 247 ||||| Sbjct: 289 agcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 478 bits (241), Expect = e-131 Identities = 244/245 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 243 agcgt 247 ||||| Sbjct: 289 agcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 452 bits (228), Expect = e-124 Identities = 308/332 (92%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 177082 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccggagat 177141 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| |||| Sbjct: 177142 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagagaacc 177200 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177201 aggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 177260 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 177261 gcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaataca 177320 Query: 243 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 301 ||||| |||| |||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 177321 agcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 177380 Query: 302 agccgaaagcatcactagcttatgctctgacc 333 |||||||||||||||||||||| ||||||||| Sbjct: 177381 agccgaaagcatcactagcttaggctctgacc 177412 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 177446 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagc 147 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagc 147 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 430 bits (217), Expect = e-117 Identities = 220/221 (99%) Strand = Plus / Plus Query: 339 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 399 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 459 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 518 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcata 221
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 428 bits (216), Expect = e-117 Identities = 394/451 (87%), Gaps = 8/451 (1%) Strand = Plus / Minus Query: 109 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 168 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 169 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 228 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 229 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 284 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 344 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 345 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 404 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 405 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 464 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 465 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 524 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 525 cgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||| Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgact 138668 Score = 428 bits (216), Expect = e-117 Identities = 394/451 (87%), Gaps = 8/451 (1%) Strand = Plus / Plus Query: 109 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 168 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 169 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 228 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 229 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 284 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 344 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 345 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 404 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 405 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 464 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 465 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 524 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 525 cgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||| Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgact 83209
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 71 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 130 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 191 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 250 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 251 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 310 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 311 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 370 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 371 gcaaggaccaccttgcaag 389 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 398 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 457 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 458 ggtagtgaaatagaacgtgaaacc 481 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcata 3208 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 15 agcgacgaaatgcttcggggagttgaaaataagcatagatccggag 60 |||||||||||||||| | |||||| |||||||| |||||| |||| Sbjct: 3739 agcgacgaaatgcttcagagagttgcaaataagcgtagatcaggag 3694
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 408 bits (206), Expect = e-111 Identities = 307/340 (90%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 216 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 275 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 276 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 335 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 456 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 515 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 516 atctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgact 5948 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 15 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 74 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 75 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 134 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 135 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 194 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 195 atgggagcagcctaaaccgt 214 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 406 bits (205), Expect = e-110 Identities = 205/205 (100%) Strand = Plus / Plus Query: 355 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 415 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 475 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 535 ttgaagaatgagccggcgactcata 559 ||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcata 205
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 168 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 227 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 228 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 286 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 287 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 346 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 347 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 406 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 407 gaccgata 414 |||||||| Sbjct: 241 gaccgata 248
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 392 bits (198), Expect = e-106 Identities = 252/268 (94%), Gaps = 4/268 (1%) Strand = Plus / Plus Query: 292 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 351 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 352 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 412 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 471 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 472 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 531 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 532 ctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcata 266
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 365 bits (184), Expect = 1e-97 Identities = 218/228 (95%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79719 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 79660 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 79659 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 79601 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79600 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 79541 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 230 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79540 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 457 gggtagtgaaatagaacgtgaaaccgt 483 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 355 bits (179), Expect = 1e-94 Identities = 182/183 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75817 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 75876 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75877 tcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaagagacaacc 75936 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75937 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 75996 Query: 183 gcg 185 ||| Sbjct: 75997 gcg 75999 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggcgaactgaaacatcttag 143 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 339 bits (171), Expect = 6e-90 Identities = 456/541 (84%), Gaps = 15/541 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 200 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 259 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 260 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 319 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 320 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 378 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 379 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 438 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 439 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 498 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 499 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 558 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594 Query: 559 a 559 | Sbjct: 595 a 595
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 599 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| Sbjct: 39 aagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagat 98 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 99 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 158 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 159 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 218 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgt 214 | |||||||||||||||| ||||||||||||| Sbjct: 219 gtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 112 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 171 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 172 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 231 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgt 214 | |||||||||||||||| ||||||||||||| Sbjct: 232 gtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 289 bits (146), Expect = 5e-75 Identities = 205/224 (91%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 716 Score = 252 bits (127), Expect = 1e-63 Identities = 190/211 (90%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||||||||||||||||||||||||| || ||| || |||||| ||||||||||| Sbjct: 156 aagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggagat 215 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 216 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 275 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 276 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 335 Query: 183 gcggcgagcgaaatgggagcagcctaaaccg 213 | |||||||||||||||| |||||||||||| Sbjct: 336 gtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 486 tgagctcccaagcagtgggaggggaaagtgatc 518 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 486 tgagctcccaagcagtgggaggggaaagtgatc 518 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 307 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 366 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 367 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 426 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 427 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 486 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 487 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 546 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 547 ccggcgactcata 559 ||||||||||||| Sbjct: 608 ccggcgactcata 620 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 165 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 166 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 225 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 226 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 285 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 286 a 286 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 7e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 182 bits (92), Expect = 8e-43 Identities = 184/211 (87%), Gaps = 4/211 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggaga 61 ||||||||| |||||||||||||||| |||| |||| || |||| || |||||||||| Sbjct: 8 aagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggaga 65 Query: 62 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 121 | ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| ||| Sbjct: 66 tccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataac 124 Query: 122 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcagt 184 Query: 182 agcggcgagcgaaatgggagcagcctaaacc 212 || |||||||||||||||| ||||||||||| Sbjct: 185 agtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 253 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 312 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 313 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 372 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 373 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 432 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 492 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 493 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 552 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 553 act 555 ||| Sbjct: 599 act 601 Score = 250 bits (126), Expect = 4e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 52 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 112 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 171 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 172 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 231 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 236 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 232 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 253 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 312 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 313 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 372 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 373 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 432 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 492 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 493 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 552 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 553 act 555 ||| Sbjct: 124666 act 124664 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 253 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 312 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 313 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 372 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 373 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 432 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 492 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 493 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 552 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 553 act 555 ||| Sbjct: 95200 act 95202 Score = 250 bits (126), Expect = 4e-63 Identities = 207/234 (88%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 125213 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 125154 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 125153 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 125094 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 125093 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 125034 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 236 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125033 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 250 bits (126), Expect = 4e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 94653 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 94712 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 94713 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 94772 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 94773 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 94832 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 236 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94833 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434055 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19433996 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19433995 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19433936 Query: 123 tggcgaactgaaacat 138 |||||||||||||||| Sbjct: 19433935 tggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 506 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 547 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 424 taccgtgagggaaaggtgaaaagaacc 450 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51582 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 51523 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 51522 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 51463 Query: 123 tggcgaactgaaacat 138 |||||||||||||||| Sbjct: 51462 tggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119546 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119487 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119486 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119427 Query: 123 tggcgaactgaaacat 138 |||||||||||||||| Sbjct: 119426 tggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6076 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 6135 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6136 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 6195 Query: 123 tggcgaactgaaacat 138 |||||||||||||||| Sbjct: 6196 tggcgaactgaaacat 6211
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 598 Score = 163 bits (82), Expect = 8e-37 Identities = 178/210 (84%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 39 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 98 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 99 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 158 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 159 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 218 Query: 183 gcggcgagcgaaatgggagcagcctaaacc 212 ||||||||||||| |||| ||| ||||||| Sbjct: 219 gcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 115064 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 86924 Score = 163 bits (82), Expect = 8e-37 Identities = 178/210 (84%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 115624 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 115565 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 115564 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 115505 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115504 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 115445 Query: 183 gcggcgagcgaaatgggagcagcctaaacc 212 ||||||||||||| |||| ||| ||||||| Sbjct: 115444 gcggcgagcgaaaggggaacagtctaaacc 115415 Score = 163 bits (82), Expect = 8e-37 Identities = 178/210 (84%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 86364 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 86423 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 86424 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 86483 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86484 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 86543 Query: 183 gcggcgagcgaaatgggagcagcctaaacc 212 ||||||||||||| |||| ||| ||||||| Sbjct: 86544 gcggcgagcgaaaggggaacagtctaaacc 86573
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 258 bits (130), Expect = 2e-65 Identities = 133/134 (99%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 1655 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1656 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 1715 Query: 123 tggcgaactgaaac 136 |||||||||||||| Sbjct: 1716 tggcgaactgaaac 1729
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 250 bits (126), Expect = 4e-63 Identities = 132/134 (98%) Strand = Plus / Minus Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 546 gccggcgactcata 559 |||||||||||||| Sbjct: 107930 gccggcgactcata 107917
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 627 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 211 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 588 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 172 ttcccgtagtagcggcgagcgaa 194 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 260 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 319 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 320 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 379 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 380 accttgcaaggctaaatactcctgggtgaccga 412 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 279 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 338 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 339 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 398 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 399 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 458 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 459 gtagtgaaatagaacgtgaaa 479 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 8e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 80 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 81 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 140 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 141 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 200 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 201 gcagcctaaaccgtgaaaacggggttg 227 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcata 607
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 232 bits (117), Expect = 1e-57 Identities = 206/235 (87%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 325 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 384 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 385 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 444 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 445 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 504 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 505 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 || ||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcata 611 Score = 184 bits (93), Expect = 2e-43 Identities = 182/209 (87%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||| |||||||||||| ||||| | | ||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatccggagat 111 Query: 63 tcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaagagacaac 121 |||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||||||||| Sbjct: 112 tcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataagagacaac 170 Query: 122 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 181 |||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 171 ctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcctgagt 230 Query: 182 agcggcgagcgaaatgggagcagcctaaa 210 |||||||||||||||||||| |||||||| Sbjct: 231 agcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 457 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 516 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 517 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 4649 Score = 214 bits (108), Expect = 2e-52 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 4085 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 4144 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| || |||| || |||||| ||||||||||| || | |||||| |||| Sbjct: 4145 tcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacc 4203 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 4204 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 4263 Query: 183 gcggcgagcgaaatgggagcagcctaaa 210 ||||||||||||||||||| |||||||| Sbjct: 4264 gcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 457 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 516 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 517 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 616 Score = 206 bits (104), Expect = 6e-50 Identities = 183/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| || |||| || |||||| ||||||| ||| || | |||||| |||| Sbjct: 112 tcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagagagaacc 170 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 230 Query: 183 gcggcgagcgaaatgggagcagcctaaa 210 ||||||||||||||||||| |||||||| Sbjct: 231 gcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 457 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 516 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 517 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 616 Score = 214 bits (108), Expect = 2e-52 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||| || |||| || |||||| ||||||||||| || | |||||| |||| Sbjct: 112 tcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacc 170 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 230 Query: 183 gcggcgagcgaaatgggagcagcctaaa 210 ||||||||||||||||||| |||||||| Sbjct: 231 gcggcgagcgaaatgggagaagcctaaa 258
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| |||| Sbjct: 39 aagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtagat 98 Query: 63 tcccaaataggtcaacct 80 |||| |||||| |||||| Sbjct: 99 tcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 2384 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| |||| Sbjct: 1805 aagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtagat 1864 Query: 63 tcccaaataggtcaacct 80 |||| |||||| |||||| Sbjct: 1865 tcccgaatagggcaacct 1882
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 230 bits (116), Expect = 4e-57 Identities = 202/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 326 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 385 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 386 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 445 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 446 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 505 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 506 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 || || | || ||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgact 564 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 119 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 178 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 179 agtagcggcgagcgaaatgggagcagcctaaacc 212 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcgg 32 |||||||||| ||||||||||| ||||||| Sbjct: 13 aagggcgtagtaagcgacgaaacgcttcgg 42
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 17 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 76 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 77 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 136 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 137 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 196 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 197 gggagcagcctaaaccg 213 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 224 bits (113), Expect = 2e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Minus Query: 7 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 65 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 89827 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 89768 Query: 66 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 125 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 89767 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 89709 Query: 126 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 166 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89708 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 224 bits (113), Expect = 2e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 7 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 65 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 443 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 502 Query: 66 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 125 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 503 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 561 Query: 126 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 166 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 562 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 474 gtgaaa 479 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 ag 201 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 474 gtgaaa 479 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 agcagcctaa 209 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 450 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 556 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 118 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 177 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 178 tagtagcggcgagcgaaatgggagcagcctaaac 211 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 212 bits (107), Expect = 9e-52 Identities = 196/225 (87%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 168 bits (85), Expect = 1e-38 Identities = 182/212 (85%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||| | || || ||| || | |||||||| Sbjct: 455 aagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaacccggagat 512 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||||| Sbjct: 513 tcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaacc 571 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 572 tggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttagta 631 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgt 214 | ||||||||||| |||| ||||||||||||| Sbjct: 632 gtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 9e-52 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatggga 200 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccg 482 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 17 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 76 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 77 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 136 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 137 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 196 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 197 gggagcagcctaaacc 212 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 21 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 79 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 80 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 139 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 140 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 199 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 200 ag 201 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 108 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 167 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 168 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 191 cgaaatgggagcagcctaaacc 212 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 206 bits (104), Expect = 6e-50 Identities = 200/232 (86%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||| || || ||| ||||||||| |||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatccgaagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||| || ||| |||| ||| ||| | |||| ||||| |||| Sbjct: 112 tcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagagaaaacc 171 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 172 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 231 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 | ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 232 gtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 456 tgggtagtgaaatagaacgtgaaacc 481 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 451 cc 452 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 110 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 169 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 170 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 522 gaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgact 595 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 17 cgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||||||||||||||||| ||| | || |||||||||||| Sbjct: 66 cgacgaaatgcttcggggagttggaaagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 456 tgggtagtgaaatagaacgtgaaacc 481 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 170 bits (86), Expect = 3e-39 Identities = 194/230 (84%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| ||||||||||||||||||||||| || || ||| ||| ||||| |||| Sbjct: 1819 aagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatccgaagat 1878 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| ||||| || ||| |||| |||| || | |||| ||||| |||| Sbjct: 1879 tcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagagaaaacc 1938 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 1939 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 1998 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 232 | ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1999 gtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 191 cgaaatgggagcagcctaaacc 212 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgact 780
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 187 cgagcgaaatgggagcagcctaaac 211 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 80 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 80 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 191 cgaaatgggagcagcctaaacc 212 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 198 bits (100), Expect = 1e-47 Identities = 197/226 (87%), Gaps = 10/226 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 509 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | || | |||||||||||||||||||||||||||||||||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgact 653 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgact 151772 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgact 42431
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 80 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 187 cgagcgaaatgggagcagcctaaac 211 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 80 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgact 603
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgact 688
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 5e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||| | || |||||||| ||||||||||| || ||| ||||| ||||||||||| Sbjct: 31 aagggcgtggaaaccgacgaaacgcttcggggagctggaaacaagcaatgatccggagat 90 Query: 63 tcccaaataggtcaacct 80 |||| |||||| |||||| Sbjct: 91 tcccgaatagggcaacct 108
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 440 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 499 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 500 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 549 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 456 tgggtagtgaaatagaacgtgaaacc 481 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 190 bits (96), Expect = 3e-45 Identities = 198/232 (85%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||| |||||| || || ||| ||||||||| |||| Sbjct: 3086 aagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatccgaagat 3145 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| |||||| || ||| |||| ||| ||| |||| ||||| |||| Sbjct: 3146 tcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagagaaaacc 3205 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 3206 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 3265 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 | ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3266 gtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgact 3635
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 194 bits (98), Expect = 2e-46 Identities = 190/220 (86%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 456 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 515 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 516 atctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | || ||||||||||||||||||||||||||||||||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgact 601 Score = 186 bits (94), Expect = 5e-44 Identities = 196/230 (85%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| |||||||||||||||||||||| || || ||||||| ||||| |||| Sbjct: 52 aagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatccgaagat 111 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| ||||| || ||| |||| |||| || | |||| ||||| |||| Sbjct: 112 tcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagagaaaacc 171 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 | | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 172 tagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagta 231 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 232 | ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 232 gtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 17 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 76 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 77 acct 80 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 335 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 394 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 395 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 454 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 455 gtgggtagtgaaatagaacgtgaaaccgt 483 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 528 gtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgact 218
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 392 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 508 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 509 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 191 cgaa 194 |||| Sbjct: 238 cgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 392 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 508 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 509 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 191 cgaa 194 |||| Sbjct: 219 cgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 392 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 508 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 509 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 191 cgaa 194 |||| Sbjct: 238 cgaa 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 80 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||| |||||||||||||||||||||||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgact 620
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 188 bits (95), Expect = 1e-44 Identities = 190/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 335 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 394 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 395 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 454 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 455 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 514 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 515 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | ||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgact 218
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 509 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 509 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 507 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 507 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||||||| |||||||| || ||||||| || || |||| ||||||||||| Sbjct: 171467 aagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagat 171408 Query: 63 tcccaaataggtcaacct 80 |||| |||||| |||||| Sbjct: 171407 tcccgaatagggcaacct 171390 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||||||| |||||||| || ||||||| || || |||| ||||||||||| Sbjct: 121459 aagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagat 121518 Query: 63 tcccaaataggtcaacct 80 |||| |||||| |||||| Sbjct: 121519 tcccgaatagggcaacct 121536
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 451 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 509 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 || ||||||||||||||||||||||||||||||||||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 155618 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 451 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 509 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 || ||||||||||||||||||||||||||||||||||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 78274 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 85 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 86 a 86 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 85 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 86 a 86 | Sbjct: 77725 a 77725
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 507 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 ||||||||||||| |||||||| || ||||||| || || |||| ||||||||||| Sbjct: 50 aagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagat 109 Query: 63 tcccaaataggtcaacct 80 |||| |||||| |||||| Sbjct: 110 tcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 450 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgt 483 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 157 bits (79), Expect = 5e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 3 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 62 |||||||||| | |||||| | ||||||||||| || || |||| | |||||| |||| Sbjct: 39 aagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaagat 98 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||||| Sbjct: 99 tcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaacc 158 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||||| Sbjct: 159 cggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagta 218 Query: 183 gcggcgagcgaaatgggagcagcctaaaccg 213 | ||||||||||| |||| ||| |||||||| Sbjct: 219 gtggcgagcgaaaagggatcagtctaaaccg 249 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||||||||||||||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgact 592
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 178 bits (90), Expect = 1e-41 Identities = 198/228 (86%), Gaps = 12/228 (5%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 451 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 507 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 508 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 | ||| || |||||||||||||||||||||||||||||||||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgact 602 Score = 113 bits (57), Expect = 6e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 20 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 79 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 80 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 199 gagcagcctaaac 211 || |||||||||| Sbjct: 229 gaacagcctaaac 241
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 85 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 86 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 145 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 146 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 205 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 206 ctaaacc 212 ||||||| Sbjct: 253 ctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 26 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 85 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 86 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 145 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 146 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 205 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 206 ctaaacc 212 ||||||| Sbjct: 253 ctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 335 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 394 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 395 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 454 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 455 gtgggtagtgaaatagaacgtgaaaccgt 483 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcga 553 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 452 ccagt-gggtagtgaaatagaacgtgaaaccgt 483 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 128 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 187 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 188 gagcgaaatgggagcagcctaaacc 212 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 176 bits (89), Expect = 5e-41 Identities = 194/225 (86%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 512 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgact 555 ||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgact 784 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 451 c 451 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 118 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 177 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 178 tagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 254 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 303 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 451 c 451 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 118 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 177 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 178 tagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 559 |||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 603 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 254 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 303 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,942,519 Number of Sequences: 3902068 Number of extensions: 3942519 Number of successful extensions: 118976 Number of sequences better than 10.0: 26617 Number of HSP's better than 10.0 without gapping: 26445 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74881 Number of HSP's gapped (non-prelim): 42141 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
