Clone Name | basd3d21 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB219969.1| Triticum aestivum WAP2 mRNA for aspartic proteinase, complete cds Length = 1560 Score = 404 bits (204), Expect = e-109 Identities = 234/244 (95%) Strand = Plus / Plus Query: 1 aatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtg 60 |||||||||||| |||| |||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 1295 aatcttgctttcaccatcgcaagcaagactttcgtgctaacaccagagcagtacgttgtg 1354 Query: 61 aaactggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccg 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 aaactggagcaatcagggcaaaccgtctgcatcagtgggttcatggcattcgacataccg 1414 Query: 121 cccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtg 180 |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 1415 cccccacgtggtcctctctggattcttggggatgtcttcatgggcgcttaccacaccgtg 1474 Query: 181 ttcgacttcggcaaggacagaatcgggttcgcagaatcggcttgaggagtcgagagcact 240 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1475 ttcgacttcggcaaggacagaatcgggtttgcggaatcggcttgaggagtcgagagcact 1534 Query: 241 gtga 244 |||| Sbjct: 1535 gtga 1538
>ref|XM_475576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 206 bits (104), Expect = 6e-50 Identities = 185/212 (87%) Strand = Plus / Plus Query: 1 aatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtg 60 |||||||| ||| |||| ||||||||||| || | || ||||||||||||||||| ||| Sbjct: 1267 aatcttgcattcaccattgcaaacaagacatttattcttacaccagagcagtacatcgtg 1326 Query: 61 aaactggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccg 120 |||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 1327 aaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggcgttcgacatacct 1386 Query: 121 cccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtg 180 || |||||||||||||| |||||||| || |||||||||||||| | ||| || || || Sbjct: 1387 ccaccacgcggtcctctttggattcttggagatgtcttcatgggtgcttatcatacggtt 1446 Query: 181 ttcgacttcggcaaggacagaatcgggttcgc 212 |||||||||||||| ||||| ||||||||||| Sbjct: 1447 ttcgacttcggcaaagacaggatcgggttcgc 1478
>dbj|AK065206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F13, full insert sequence Length = 1900 Score = 206 bits (104), Expect = 6e-50 Identities = 185/212 (87%) Strand = Plus / Plus Query: 1 aatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtg 60 |||||||| ||| |||| ||||||||||| || | || ||||||||||||||||| ||| Sbjct: 1419 aatcttgcattcaccattgcaaacaagacatttattcttacaccagagcagtacatcgtg 1478 Query: 61 aaactggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccg 120 |||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 1479 aaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggcgttcgacatacct 1538 Query: 121 cccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtg 180 || |||||||||||||| |||||||| || |||||||||||||| | ||| || || || Sbjct: 1539 ccaccacgcggtcctctttggattcttggagatgtcttcatgggtgcttatcatacggtt 1598 Query: 181 ttcgacttcggcaaggacagaatcgggttcgc 212 |||||||||||||| ||||| ||||||||||| Sbjct: 1599 ttcgacttcggcaaagacaggatcgggttcgc 1630
>dbj|D12777.1|RICASPPRO Oryza sativa (japonica cultivar-group) mRNA for aspartic proteinase, complete cds Length = 1774 Score = 206 bits (104), Expect = 6e-50 Identities = 185/212 (87%) Strand = Plus / Plus Query: 1 aatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtg 60 |||||||| ||| |||| ||||||||||| || | || ||||||||||||||||| ||| Sbjct: 1348 aatcttgcattcaccattgcaaacaagacatttattcttacaccagagcagtacatcgtg 1407 Query: 61 aaactggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccg 120 |||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 1408 aaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggcgttcgacatacct 1467 Query: 121 cccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtg 180 || |||||||||||||| |||||||| || |||||||||||||| | ||| || || || Sbjct: 1468 ccaccacgcggtcctctttggattcttggagatgtcttcatgggtgcttatcatacggtt 1527 Query: 181 ttcgacttcggcaaggacagaatcgggttcgc 212 |||||||||||||| ||||| ||||||||||| Sbjct: 1528 ttcgacttcggcaaagacaggatcgggttcgc 1559
>dbj|AB028888.1| Oryza sativa RAP mRNA for aspartic proteinase, partial cds Length = 492 Score = 190 bits (96), Expect = 3e-45 Identities = 183/212 (86%) Strand = Plus / Plus Query: 1 aatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtg 60 |||||||| ||| |||| ||||||| ||| || | || ||||||||||||||||| ||| Sbjct: 55 aatcttgcattcaccattgcaaacaggacatttattcttacaccagagcagtacatcgtg 114 Query: 61 aaactggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccg 120 |||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 115 aaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggcgttcgacatacct 174 Query: 121 cccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtg 180 || |||||||||||||| |||||||| || |||||||||||||| | ||| || || || Sbjct: 175 ccaccacgcggtcctctttggattcttggagatgtcttcatgggtgcttatcatacggtt 234 Query: 181 ttcgacttcggcaaggacagaatcgggttcgc 212 |||||||||||||| ||||| |||||| |||| Sbjct: 235 ttcgacttcggcaaagacaggatcggggtcgc 266
>gb|AY103665.1| Zea mays PCO108960 mRNA sequence Length = 1413 Score = 165 bits (83), Expect = 2e-37 Identities = 182/215 (84%) Strand = Plus / Plus Query: 4 cttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtgaaa 63 ||||| ||| |||| ||||||||||| ||| |||||||| |||||||||||||||| Sbjct: 902 cttgcgttcaccatcgcaaacaagaccttcaccctaacaccccagcagtacattgtgaag 961 Query: 64 ctggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccgccc 123 ||||||||| ||| || |||||||||||||||||||||||||| | ||| | || || Sbjct: 962 ctggagcaaggaggccaaaccgtctgcatcagtgggttcatggcgtatgacgtgccaccg 1021 Query: 124 ccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttc 183 || || ||||||||||||||||| ||||| ||||||||||| | ||||||||| |||||| Sbjct: 1022 ccgcgtggtcctctctggattcttggggacgtcttcatgggagcttaccacacggtgttc 1081 Query: 184 gacttcggcaaggacagaatcgggttcgcagaatc 218 ||||||||||| ||||| || || ||||| ||||| Sbjct: 1082 gacttcggcaacgacaggattggcttcgcggaatc 1116
>gb|AY103982.1| Zea mays PCO140262 mRNA sequence Length = 1929 Score = 141 bits (71), Expect = 3e-30 Identities = 161/191 (84%) Strand = Plus / Plus Query: 1 aatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtg 60 |||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 1431 aatcttgcattcaccatagcaaacaagactttcaccttaacaccagagcagtacatagtg 1490 Query: 61 aaactggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccg 120 || ||||||||| |||| || || |||||||||||||||| |||||||| ||| ||||| Sbjct: 1491 aagctggagcaagcaggacaaactatctgcatcagtgggtttatggcatttgacgtaccg 1550 Query: 121 cccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtg 180 || || || |||||||||||||| || || ||||| || ||||| | |||||||| || Sbjct: 1551 cctcctcgtggtcctctctggatacttggtgatgtttttatgggtgcctaccacactgtt 1610 Query: 181 ttcgacttcgg 191 || |||||||| Sbjct: 1611 tttgacttcgg 1621
>gb|BT018637.1| Zea mays clone EL01N0504C03.d mRNA sequence Length = 1568 Score = 127 bits (64), Expect = 4e-26 Identities = 160/192 (83%) Strand = Plus / Plus Query: 1 aatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtg 60 |||||||| ||| |||||||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 1056 aatcttgcattcaccatagcaaataagactttcaccttaacaccagagcagtacatagtg 1115 Query: 61 aaactggagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccg 120 || ||||||||| |||| || || |||||||||||||||| |||||||| ||| ||||| Sbjct: 1116 aagctggagcaagcaggacaaactatctgcatcagtgggtttatggcatttgacgtaccg 1175 Query: 121 cccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtg 180 || || || |||||||||||||| || || ||||| || ||| | | |||||||| || Sbjct: 1176 cctcctcgtggtcctctctggatacttggtgatgtttttatgagtgtctaccacactgtt 1235 Query: 181 ttcgacttcggc 192 || ||||||||| Sbjct: 1236 tttgacttcggc 1247
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 48 gcagtacattgtgaaactggagcaatcagggcagaccgtctgcatcagtgggttcatggc 107 ||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||| Sbjct: 2118149 gcagtacatcgtgaaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggc 2118208 Query: 108 attcgacataccgcccccacgcggtcctct 137 ||||||||||| || |||||||||||||| Sbjct: 2118209 gttcgacatacctccaccacgcggtcctct 2118238 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 140 ggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttcggcaaggaca 199 ||||||| || |||||||||||||| | ||| || || || |||||||||||||| |||| Sbjct: 2118348 ggattcttggagatgtcttcatgggtgcttatcatacggttttcgacttcggcaaagaca 2118407 Query: 200 gaatcgggttcgc 212 | ||||||||||| Sbjct: 2118408 ggatcgggttcgc 2118420
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 48 gcagtacattgtgaaactggagcaatcagggcagaccgtctgcatcagtgggttcatggc 107 ||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||| Sbjct: 84990 gcagtacatcgtgaaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggc 85049 Query: 108 attcgacataccgcccccacgcggtcctct 137 ||||||||||| || |||||||||||||| Sbjct: 85050 gttcgacatacctccaccacgcggtcctct 85079 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 140 ggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttcggcaaggaca 199 ||||||| || |||||||||||||| | ||| || || || |||||||||||||| |||| Sbjct: 85189 ggattcttggagatgtcttcatgggtgcttatcatacggttttcgacttcggcaaagaca 85248 Query: 200 gaatcgggttcgc 212 | ||||||||||| Sbjct: 85249 ggatcgggttcgc 85261
>ref|NM_183594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 14 ccatagcaaacaagactttcgtgctaacaccagagcagtacattgtgaaactggagcaat 73 |||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||| Sbjct: 1277 ccatagcaaacaagaccttcaccttgacaccagagcagtacgtagtgaagctggagcagc 1336 Query: 74 cagggcagaccgtctgcatcagtgggttcatggcattcgacataccgcccccacgcggtc 133 ||| || || || |||||||| ||||||||||| |||||| | || || |||||||| | Sbjct: 1337 aaggtcaaactgtttgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcc 1396 Query: 134 ctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttcggca 193 | ||||||||||| || || || ||||||| | |||||||| || |||||||| |||| Sbjct: 1397 cactctggattcttggagacgtgttcatggctgcataccacactgtcttcgactttggca 1456 Query: 194 aggacagaatcgggttcgcagaatcggcttga 225 | |||| || |||||||| || || |||||| Sbjct: 1457 aaaacaggattgggttcgccgagtctgcttga 1488
>dbj|AK104371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E08, full insert sequence Length = 1155 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 14 ccatagcaaacaagactttcgtgctaacaccagagcagtacattgtgaaactggagcaat 73 |||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||| Sbjct: 560 ccatagcaaacaagaccttcaccttgacaccagagcagtacgtagtgaagctggagcagc 619 Query: 74 cagggcagaccgtctgcatcagtgggttcatggcattcgacataccgcccccacgcggtc 133 ||| || || || |||||||| ||||||||||| |||||| | || || |||||||| | Sbjct: 620 aaggtcaaactgtttgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcc 679 Query: 134 ctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttcggca 193 | ||||||||||| || || || ||||||| | |||||||| || |||||||| |||| Sbjct: 680 cactctggattcttggagacgtgttcatggctgcataccacactgtcttcgactttggca 739 Query: 194 aggacagaatcgggttcgcagaatcggcttga 225 | |||| || |||||||| || || |||||| Sbjct: 740 aaaacaggattgggttcgccgagtctgcttga 771
>dbj|AK100420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088B02, full insert sequence Length = 1853 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 14 ccatagcaaacaagactttcgtgctaacaccagagcagtacattgtgaaactggagcaat 73 |||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||| Sbjct: 1388 ccatagcaaacaagaccttcaccttgacaccagagcagtacgtagtgaagctggagcagc 1447 Query: 74 cagggcagaccgtctgcatcagtgggttcatggcattcgacataccgcccccacgcggtc 133 ||| || || || |||||||| ||||||||||| |||||| | || || |||||||| | Sbjct: 1448 aaggtcaaactgtttgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcc 1507 Query: 134 ctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttcggca 193 | ||||||||||| || || || ||||||| | |||||||| || |||||||| |||| Sbjct: 1508 cactctggattcttggagacgtgttcatggctgcataccacactgtcttcgactttggca 1567 Query: 194 aggacagaatcgggttcgcagaatcggcttga 225 | |||| || |||||||| || || |||||| Sbjct: 1568 aaaacaggattgggttcgccgagtctgcttga 1599
>dbj|AK072264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005B17, full insert sequence Length = 1778 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 14 ccatagcaaacaagactttcgtgctaacaccagagcagtacattgtgaaactggagcaat 73 |||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||| Sbjct: 1361 ccatagcaaacaagaccttcaccttgacaccagagcagtacgtagtgaagctggagcagc 1420 Query: 74 cagggcagaccgtctgcatcagtgggttcatggcattcgacataccgcccccacgcggtc 133 ||| || || || |||||||| ||||||||||| |||||| | || || |||||||| | Sbjct: 1421 aaggtcaaactgtttgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcc 1480 Query: 134 ctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttcggca 193 | ||||||||||| || || || ||||||| | |||||||| || |||||||| |||| Sbjct: 1481 cactctggattcttggagacgtgttcatggctgcataccacactgtcttcgactttggca 1540 Query: 194 aggacagaatcgggttcgcagaatcggcttga 225 | |||| || |||||||| || || |||||| Sbjct: 1541 aaaacaggattgggttcgccgagtctgcttga 1572
>dbj|AK066523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071P15, full insert sequence Length = 2061 Score = 87.7 bits (44), Expect = 4e-14 Identities = 170/212 (80%) Strand = Plus / Plus Query: 14 ccatagcaaacaagactttcgtgctaacaccagagcagtacattgtgaaactggagcaat 73 |||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||| Sbjct: 1442 ccatagcaaacaagaccttcaccttgacaccagagcagtacgtagtgaagctggagcagc 1501 Query: 74 cagggcagaccgtctgcatcagtgggttcatggcattcgacataccgcccccacgcggtc 133 ||| || || || |||||||| ||||||||||| |||||| | || || |||||||| | Sbjct: 1502 aaggtcaaactgtttgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcc 1561 Query: 134 ctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttcggca 193 | ||||||||||| || || || ||||||| | |||||||| || |||||||| |||| Sbjct: 1562 cactctggattcttggagacgtgttcatggctgcataccacactgtcttcgactttggca 1621 Query: 194 aggacagaatcgggttcgcagaatcggcttga 225 | |||| || |||||||| || || |||||| Sbjct: 1622 aaaacaggattgggttcgccgagtctgcttga 1653
>emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase Length = 1800 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 112 gacataccgcccccacgcggtcctctctggattctcggggatgtcttcatgggcggttac 171 ||||| ||||| || ||||||||||||||||| || || || |||||||||||| ||| Sbjct: 1449 gacatcccgcctcctcgcggtcctctctggatcctgggagacgtcttcatgggcccgtac 1508 Query: 172 cacaccgtgttcgacttcggcaag 195 |||||||| || |||| ||||||| Sbjct: 1509 cacaccgtctttgactacggcaag 1532
>dbj|AB219968.1| Triticum aestivum WAP1 mRNA for aspartic proteinase, complete cds Length = 1527 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 112 gacataccgcccccacgcggtcctctctggattctcggggatgtcttcatgggcggttac 171 ||||| ||||| || ||||||||||||||||| || || || || ||||||||| ||| Sbjct: 1414 gacatcccgcctcctcgcggtcctctctggatcctgggagacgttttcatgggcccctac 1473 Query: 172 cacaccgtgttcgacttcggcaag 195 |||||||| ||||||| ||||||| Sbjct: 1474 cacaccgtcttcgactacggcaag 1497
>gb|AY389666.1| Hyacinthus orientalis aspartic proteinase mRNA, partial cds Length = 585 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 116 taccgcccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccaca 175 ||||||| || || ||||||||||||||| | || |||||||||||| ||| ||| |||| Sbjct: 318 taccgccaccgcggggtcctctctggattttgggtgatgtcttcatgagcgcttatcaca 377 Query: 176 ccgtgttcga 185 ||| |||||| Sbjct: 378 ccgagttcga 387
>dbj|AB091763.1| Glycine max soyAP5 mRNA for aspartic proteinase 5, partial cds Length = 636 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 94 agtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggggat 153 |||||||| || || || ||||| || || ||||| ||||||||||||||||| |||||| Sbjct: 397 agtgggtttattgcttttgacattcctcctccacggggtcctctctggattcttggggat 456 Query: 154 gtcttcatg 162 || |||||| Sbjct: 457 gttttcatg 465
>ref|NM_001025621.1| Canis familiaris cathepsin D (lysosomal aspartyl peptidase) (CTSD), mRNA Length = 1524 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 128 gcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgac 186 |||| ||||||||||| || || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 1199 gcgggcctctctggatcctgggtgatgtcttcatcggctgctactacaccgtgttcgac 1257
>emb|AM048627.1| Canis familiaris mRNA for cathepsin D (ctsd gene) Length = 1524 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 128 gcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgac 186 |||| ||||||||||| || || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 1199 gcgggcctctctggatcctgggtgatgtcttcatcggctgctactacaccgtgttcgac 1257
>dbj|AK100749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118K01, full insert sequence Length = 1086 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 707 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 766 Query: 190 ggcaagg 196 ||||||| Sbjct: 767 ggcaagg 773
>gb|AF285164.1| Oryza sativa subsp. japonica aspartic protease mRNA, partial cds Length = 562 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 262 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 321 Query: 190 ggcaag 195 |||||| Sbjct: 322 ggcaag 327
>dbj|AK104838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E12, full insert sequence Length = 1777 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 1498 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 1557 Query: 190 ggcaag 195 |||||| Sbjct: 1558 ggcaag 1563
>dbj|AK103421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K05, full insert sequence Length = 1818 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 1499 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 1558 Query: 190 ggcaag 195 |||||| Sbjct: 1559 ggcaag 1564
>dbj|AK098911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H22, full insert sequence Length = 1844 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 1501 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 1560 Query: 190 ggcaag 195 |||||| Sbjct: 1561 ggcaag 1566
>dbj|AK098906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D14, full insert sequence Length = 1843 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 1496 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 1555 Query: 190 ggcaag 195 |||||| Sbjct: 1556 ggcaag 1561
>dbj|AK067742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C15, full insert sequence Length = 1869 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 1499 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 1558 Query: 190 ggcaag 195 |||||| Sbjct: 1559 ggcaag 1564
>dbj|AK066453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059L24, full insert sequence Length = 2543 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 2130 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 2189 Query: 190 ggcaag 195 |||||| Sbjct: 2190 ggcaag 2195
>dbj|D32144.1|RICAPA Rice mRNA for aspartic protease, complete cds Length = 2030 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 130 ggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgacttc 189 |||||||||||||| || || || || |||||||| | ||||| ||||||||||||| | Sbjct: 1488 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccataccgtgttcgactac 1547 Query: 190 ggcaag 195 |||||| Sbjct: 1548 ggcaag 1553
>gb|AY672651.1| Solanum tuberosum Asp mRNA, complete cds Length = 1680 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 127 cgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgac 186 ||||||||||| |||||||| || ||||| |||||||| |||||||| ||||||||| Sbjct: 1394 cgcggtcctctttggattcttggagatgtattcatggggccgtaccacactgtgttcgac 1453 Query: 187 t 187 | Sbjct: 1454 t 1454
>emb|X88774.1|BORNAPAP B.oleracea mRNA for putative aspartic protease (partial) Length = 431 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 133 cctctctggattctcggggatgtcttcatgggcggttaccacaccgtgttcgactt 188 ||||||||||| || || ||||| ||||||||| |||||||||||||| ||||| Sbjct: 184 cctctctggatccttggagatgtgttcatgggcaaataccacaccgtgtttgactt 239
>emb|AJ313385.1|TCA313385 Theobroma cacao mRNA for aspartic proteinase (ap2 gene) Length = 1828 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 133 cctctctggattctcggggatgtcttcatgggcggttaccacaccgt 179 |||||||||||||| || ||| |||||||||| | ||||||||||| Sbjct: 1514 cctctctggattctgggagatatcttcatgggtcgctaccacaccgt 1560
>gb|AC008775.7| Homo sapiens chromosome 5 clone CTD-2019N2, complete sequence Length = 135503 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 309 ataagtaaaaaagctgaaacaaa 331 ||||||||||||||||||||||| Sbjct: 105489 ataagtaaaaaagctgaaacaaa 105467
>dbj|AB069959.1| Glycine max soyAP1 mRNA for aspartic proteinase 1, complete cds Length = 1719 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 124 ccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccacaccgtgtt 182 ||||| || ||||||||||| || || |||||||||||||| |||| ||||| ||||| Sbjct: 1444 ccacgtggccctctctggatccttggtgatgtcttcatggggcgttatcacacagtgtt 1502
>gb|S80547.1| procathepsin E [guinea pigs, gastric mucosa, mRNA, 1326 nt] Length = 1326 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttcat 161 |||||||| ||||||||||||||||| Sbjct: 1128 ctctggatcctcggggatgtcttcat 1153
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Minus Query: 88 tgcatcagtgggttcatggcattcgacataccgcccccacgcggtcctctctgg 141 |||||||| ||||||||||| |||||| | || || |||||||| || |||||| Sbjct: 10490774 tgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcccactctgg 10490721
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Minus Query: 88 tgcatcagtgggttcatggcattcgacataccgcccccacgcggtcctctctgg 141 |||||||| ||||||||||| |||||| | || || |||||||| || |||||| Sbjct: 135734 tgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcccactctgg 135681
>gb|L46681.1|TOMAPP Lycopersicon esculentum aspartic protease precursor mRNA, complete cds Length = 1740 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 127 cgcggtcctctctggattctcggggatgtcttcatggg 164 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1441 cgcggtcctctttggattcttggagatgtattcatggg 1478
>gb|DQ241852.1| Solanum tuberosum clone 188C11 aspartic protease precursor-like mRNA, complete cds Length = 1764 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 127 cgcggtcctctctggattctcggggatgtcttcatggg 164 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1447 cgcggtcctctttggattcttggagatgtattcatggg 1484
>gb|M88653.1|GPIPROCAT Cavia porcellus procathepsin E mRNA, complete cds Length = 1326 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttcat 161 |||||||| ||||||||||||||||| Sbjct: 1128 ctctggatcctcggggatgtcttcat 1153
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence Length = 143840 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 420 tgttgctgtgtaatgaagaatggag 444 ||||||||||||||| ||||||||| Sbjct: 52461 tgttgctgtgtaatggagaatggag 52485
>ref|XM_533610.2| PREDICTED: Canis familiaris napsin 1 (LOC476406), mRNA Length = 1332 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttcatggg 164 |||||||||||||| ||||||||| |||| Sbjct: 1102 ctctggattctcggcgatgtcttcttggg 1130
>emb|X77260.1|BOASPR B. oleracea L. gene for aspartic protease (partial) Length = 1121 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 88 tgcatcagtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctc 147 ||||||||||| || || ||| ||||| | | || ||||| || ||||||||||| | Sbjct: 742 tgcatcagtggctttattgcactcgacgttgcaccaccacgtggacctctctggatcttg 801 Query: 148 ggggatgtcttcatgggcggttaccacaccgtgttcgactt 188 || ||||| ||||||||| |||||||||||||| ||||| Sbjct: 802 ggagatgtattcatgggcaaataccacaccgtgtttgactt 842
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 420 tgttgctgtgtaatgaagaatggag 444 ||||||||||||||| ||||||||| Sbjct: 4687 tgttgctgtgtaatggagaatggag 4711
>emb|BX323819.9| Zebrafish DNA sequence from clone CH211-132F19 in linkage group 17, complete sequence Length = 178951 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 accttttatttctttcttaaa 359 ||||||||||||||||||||| Sbjct: 91261 accttttatttctttcttaaa 91241
>dbj|AP004943.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT38E13, TM0115, complete sequence Length = 95582 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 495 aaggtttgttgtatttgtaaa 515 ||||||||||||||||||||| Sbjct: 27441 aaggtttgttgtatttgtaaa 27421
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 266 gtttgtgcatcttcaga-catgggagcc 292 ||||||||||||||||| |||||||||| Sbjct: 226191 gtttgtgcatcttcagatcatgggagcc 226218
>gb|AY541455.1| Helianthus annuus haplotype 5 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1959 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aggtttgttgtatttgtaaa 515 |||||||||||||||||||| Sbjct: 1449 aggtttgttgtatttgtaaa 1430
>gb|AY541454.1| Helianthus annuus haplotype 4 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1959 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aggtttgttgtatttgtaaa 515 |||||||||||||||||||| Sbjct: 1449 aggtttgttgtatttgtaaa 1430
>gb|AY541453.1| Helianthus annuus haplotype 3 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1977 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aggtttgttgtatttgtaaa 515 |||||||||||||||||||| Sbjct: 1467 aggtttgttgtatttgtaaa 1448
>gb|AY541452.1| Helianthus annuus haplotype 2 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1965 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aggtttgttgtatttgtaaa 515 |||||||||||||||||||| Sbjct: 1455 aggtttgttgtatttgtaaa 1436
>gb|AY541451.1| Helianthus annuus haplotype 1 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aggtttgttgtatttgtaaa 515 |||||||||||||||||||| Sbjct: 1458 aggtttgttgtatttgtaaa 1439
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ctctggattctcggggatgtcttc 159 |||||||| ||||||||||||||| Sbjct: 49875 ctctggatcctcggggatgtcttc 49852
>gb|BC071022.1| Xenopus laevis hypothetical protein LOC432090, mRNA (cDNA clone IMAGE:4030481), partial cds Length = 1955 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 caaataggcaacacatggtttgta 492 |||| ||||||||||||||||||| Sbjct: 1360 caaaaaggcaacacatggtttgta 1337
>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence Length = 190133 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 aagtgagagcaaataggcaa 479 |||||||||||||||||||| Sbjct: 65023 aagtgagagcaaataggcaa 65004
>gb|AC147663.3| Pan troglodytes BAC clone CH251-304A22 from Y, complete sequence Length = 162854 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tagcaatcaattcaataata 547 |||||||||||||||||||| Sbjct: 66499 tagcaatcaattcaataata 66518
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 agctgaaacaaaagagagaa 339 |||||||||||||||||||| Sbjct: 1632467 agctgaaacaaaagagagaa 1632448
>gb|AC142354.3| Pan troglodytes BAC clone RP43-21M11 from Y, complete sequence Length = 163480 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tagcaatcaattcaataata 547 |||||||||||||||||||| Sbjct: 18211 tagcaatcaattcaataata 18230
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 taaaaaagctgaaacaaaag 333 |||||||||||||||||||| Sbjct: 63426 taaaaaagctgaaacaaaag 63445
>gb|AC150845.11| Medicago truncatula clone mth2-150a2, complete sequence Length = 131577 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tttgtgcatcttcagacatg 286 |||||||||||||||||||| Sbjct: 104193 tttgtgcatcttcagacatg 104212
>emb|AL356387.16| Human DNA sequence from clone RP5-1125M8 on chromosome 1p13.1-13.3 Contains the 3' end of the gene for eosinophil chemotactic cytokine (CHIA), a novel gene, a novel gene, a Glycosyl hydrolase faimily 18 pseudogene, a likely ortholog of mouse hypoxia induced gene 1 (HIG1) pseudogene, a progastricsin (pepsinogen C) (PGC) pseudogene and a CpG island, complete sequence Length = 91569 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ctctggattctcggggatgtcttc 159 ||||||||||| |||||||||||| Sbjct: 71713 ctctggattctgggggatgtcttc 71690
>emb|AL354873.19| Human DNA sequence from clone RP11-108K1 on chromosome 10 Contains a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, the 5' end of the ABLIM1 gene for actin binding LIM protein 1 and a CpG island, complete sequence Length = 187344 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 tttctttcttaaaccaagaataaa 370 ||||||| |||||||||||||||| Sbjct: 138578 tttcttttttaaaccaagaataaa 138601
>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3 Contains the 3' part of a novel gene, complete sequence Length = 88509 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tgctgtgtaatgaagaatgg 442 |||||||||||||||||||| Sbjct: 75078 tgctgtgtaatgaagaatgg 75097
>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence Length = 175716 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 266 gtttgtgcatcttcaga-catgggagcc 292 ||||||||||||||||| |||||||||| Sbjct: 159027 gtttgtgcatcttcagatcatgggagcc 159000
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 agctgaaacaaaagagagaa 339 |||||||||||||||||||| Sbjct: 39913 agctgaaacaaaagagagaa 39894
>gb|AC159821.2| Mus musculus BAC clone RP23-152A3 from chromosome 9, complete sequence Length = 221672 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 339 accttttatttctttcttaaaccaagaa 366 ||||||||||| ||||||||| |||||| Sbjct: 167957 accttttatttttttcttaaatcaagaa 167984
>emb|BX571678.14| Zebrafish DNA sequence from clone DKEY-271J15 in linkage group 16, complete sequence Length = 252671 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 taaaaaagctgaaacaaaag 333 |||||||||||||||||||| Sbjct: 55977 taaaaaagctgaaacaaaag 55958
>gb|BC099409.1| Mus musculus progastricsin (pepsinogen C), mRNA (cDNA clone MGC:117575 IMAGE:30790663), complete cds Length = 1407 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 |||||||| ||||||||||||||| Sbjct: 1145 ctctggatcctcggggatgtcttc 1168
>ref|NM_204877.1| Gallus gallus progastricsin (pepsinogen C) (PGC), mRNA Length = 1339 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 ||||||||||| |||||||||||| Sbjct: 1100 ctctggattcttggggatgtcttc 1123
>gb|AC154324.2| Mus musculus BAC clone RP24-494E12 from chromosome 14, complete sequence Length = 198197 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccttttatttctttcttaaa 359 |||||||||||||||||||| Sbjct: 63275 ccttttatttctttcttaaa 63294
>emb|BX321906.30| Zebrafish DNA sequence from clone DKEYP-45E9 in linkage group 10, complete sequence Length = 164266 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 accttttatttctttcttaa 358 |||||||||||||||||||| Sbjct: 93179 accttttatttctttcttaa 93198
>dbj|BS000588.2| Pan troglodytes chromosome Y clone:PTB-443K18, complete sequence Length = 151892 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tagcaatcaattcaataata 547 |||||||||||||||||||| Sbjct: 52225 tagcaatcaattcaataata 52206
>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25, complete sequence Length = 181165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 taaaaaagctgaaacaaaag 333 |||||||||||||||||||| Sbjct: 128839 taaaaaagctgaaacaaaag 128820
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tagcaatcaattcaataata 547 |||||||||||||||||||| Sbjct: 17169691 tagcaatcaattcaataata 17169710
>gb|U61396.2| Vigna unguiculata aspartic proteinase mRNA, complete cds Length = 1842 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 cctctctggattctcggggatgtcttcatggg 164 ||||||||||| || ||||| ||||||||||| Sbjct: 1573 cctctctggatccttggggacgtcttcatggg 1604
>gb|AC021678.13| Homo sapiens chromosome 8, clone RP11-380I10, complete sequence Length = 181731 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 tgtagcaatcaattcaataatatg 549 |||||||| ||||||||||||||| Sbjct: 128271 tgtagcaaccaattcaataatatg 128294
>gb|AC084261.5| Homo sapiens chromosome 8, clone RP3-335L1, complete sequence Length = 159212 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 526 tgtagcaatcaattcaataatatg 549 |||||||| ||||||||||||||| Sbjct: 114238 tgtagcaaccaattcaataatatg 114215
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 aagtgagagcaaataggcaa 479 |||||||||||||||||||| Sbjct: 194661 aagtgagagcaaataggcaa 194642
>gb|BC097578.1| Xenopus laevis hypothetical protein LOC432090, mRNA (cDNA clone MGC:114780 IMAGE:4031162), complete cds Length = 3093 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 caaataggcaacacatggtttgta 492 |||| ||||||||||||||||||| Sbjct: 1354 caaaaaggcaacacatggtttgta 1331
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 agctgaaacaaaagagagaa 339 |||||||||||||||||||| Sbjct: 112028 agctgaaacaaaagagagaa 112009
>dbj|AK008959.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210416O16 product:GASTRICSIN PRECURSOR (EC 3.4.23.3) (PEPSINOGEN C) homolog [Rattus norvegicus], full insert sequence Length = 1385 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 |||||||| ||||||||||||||| Sbjct: 1155 ctctggatcctcggggatgtcttc 1178
>dbj|AK008886.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210410L06 product:GASTRICSIN PRECURSOR (EC 3.4.23.3) (PEPSINOGEN C) homolog [Rattus norvegicus], full insert sequence Length = 1388 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 |||||||| ||||||||||||||| Sbjct: 1155 ctctggatcctcggggatgtcttc 1178
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 agctgaaacaaaagagagaa 339 |||||||||||||||||||| Sbjct: 1632465 agctgaaacaaaagagagaa 1632446
>emb|BX640592.10| Zebrafish DNA sequence from clone CH211-132E23 in linkage group 4, complete sequence Length = 186123 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 accttttatttctttcttaa 358 |||||||||||||||||||| Sbjct: 120288 accttttatttctttcttaa 120269
>gb|AC016678.4|AC016678 Homo sapiens BAC clone RP11-55O11 from Y, complete sequence Length = 142982 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tagcaatcaattcaataata 547 |||||||||||||||||||| Sbjct: 100402 tagcaatcaattcaataata 100383
>gb|AC142168.3| Mus musculus BAC clone RP24-80B23 from chromosome 9, complete sequence Length = 173152 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 339 accttttatttctttcttaaaccaagaa 366 ||||||||||| ||||||||| |||||| Sbjct: 84280 accttttatttttttcttaaatcaagaa 84307
>dbj|BS000573.1| Pan troglodytes chromosome Y clone:RP43-021M11, complete sequences Length = 163477 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tagcaatcaattcaataata 547 |||||||||||||||||||| Sbjct: 145267 tagcaatcaattcaataata 145248
>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20 Length = 79676 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 aaaaaagctgaaacaaaagagaga 338 |||||||| ||||||||||||||| Sbjct: 25035 aaaaaagcagaaacaaaagagaga 25012
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 aaaaaagctgaaacaaaaga 334 |||||||||||||||||||| Sbjct: 1517052 aaaaaagctgaaacaaaaga 1517033
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aaaaaagctgaaacaaaaga 334 |||||||||||||||||||| Sbjct: 493007 aaaaaagctgaaacaaaaga 493026
>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete sequence Length = 248284 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 ||||||||||| |||||||||||| Sbjct: 123176 ctctggattcttggggatgtcttc 123199
>emb|AL953857.7| Zebrafish DNA sequence from clone CH211-127M7, complete sequence Length = 175586 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 taaaaaagctgaaacaaaag 333 |||||||||||||||||||| Sbjct: 166772 taaaaaagctgaaacaaaag 166753
>gb|AC004558.1|AC004558 Homo sapiens chromosome 19, overlapping cosmids F20014 and F8998, complete sequence Length = 82453 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 gagaagtgagagcaaataggcaac 480 |||||||||||||||||| ||||| Sbjct: 15162 gagaagtgagagcaaataagcaac 15139
>ref|NM_025973.2| Mus musculus progastricsin (pepsinogen C) (Pgc), mRNA Length = 1385 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 |||||||| ||||||||||||||| Sbjct: 1155 ctctggatcctcggggatgtcttc 1178
>gb|AY871911.1| Synthetic construct hypothetical protein (FTT0475) gene, complete cds Length = 1224 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 aaaaaagctgaaacaaaaga 334 |||||||||||||||||||| Sbjct: 448 aaaaaagctgaaacaaaaga 467
>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete sequence Length = 175057 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgaaacaaaagagagaacct 342 |||||||||||||||||||| Sbjct: 155253 tgaaacaaaagagagaacct 155234
>dbj|AB025284.1| Gallus gallus cPgC gene for pepsinogen C, complete cds Length = 5076 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 ||||||||||| |||||||||||| Sbjct: 4834 ctctggattcttggggatgtcttc 4857
>dbj|AB025282.1| Gallus gallus cPgC mRNA for pepsinogen C, complete cds Length = 1339 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ctctggattctcggggatgtcttc 159 ||||||||||| |||||||||||| Sbjct: 1100 ctctggattcttggggatgtcttc 1123
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 agctgaaacaaaagagagaa 339 |||||||||||||||||||| Sbjct: 44930 agctgaaacaaaagagagaa 44911 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,562,265 Number of Sequences: 3902068 Number of extensions: 5562265 Number of successful extensions: 124007 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 123639 Number of HSP's gapped (non-prelim): 358 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)