ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3d19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118957 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 118898 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118897 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 118838 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118837 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 118778 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118777 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 118718 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118717 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 118658 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118657 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 118598 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118597 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118538 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118537 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 118478 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118477 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 118418 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 118417 ttttcagggtaagaaggggtagagaaaatg 118388 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96199 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 96258 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96259 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 96318 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96319 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 96378 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96379 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 96438 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96439 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 96498 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96499 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 96558 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96559 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96618 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96619 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 96678 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96679 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 96738 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 96739 ttttcagggtaagaaggggtagagaaaatg 96768
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118957 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 118898 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118897 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 118838 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118837 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 118778 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118777 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 118718 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118717 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 118658 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118657 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 118598 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118597 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118538 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118537 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 118478 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118477 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 118418 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 118417 ttttcagggtaagaaggggtagagaaaatg 118388 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96199 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 96258 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96259 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 96318 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96319 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 96378 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96379 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 96438 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96439 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 96498 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96499 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 96558 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96559 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96618 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96619 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 96678 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96679 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 96738 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 96739 ttttcagggtaagaaggggtagagaaaatg 96768
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118906 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 118847 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118846 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 118787 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118786 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 118727 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118726 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 118667 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118666 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 118607 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118606 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 118547 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118546 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118487 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118486 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 118427 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118426 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 118367 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 118366 ttttcagggtaagaaggggtagagaaaatg 118337 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96144 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 96203 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96204 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 96263 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96264 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 96323 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96324 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 96383 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96384 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 96443 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96444 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 96503 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96504 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96563 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96564 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 96623 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96624 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 96683 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 96684 ttttcagggtaagaaggggtagagaaaatg 96713
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508777 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 31508836 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508837 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 31508896 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508897 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 31508956 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508957 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 31509016 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509017 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 31509076 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509077 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 31509136 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509137 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 31509196 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509197 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 31509256 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509257 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 31509316 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 31509317 ttttcagggtaagaaggggtagagaaaatg 31509346 Score = 888 bits (448), Expect = 0.0 Identities = 457/460 (99%) Strand = Plus / Minus Query: 115 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 175 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 235 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 295 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 354 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 355 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 414 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27320364 Query: 415 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320363 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27320304 Query: 475 acggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaagg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320303 acggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaagg 27320244 Query: 535 tgaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||| |||||| Sbjct: 27320243 tgaccctgctttttcagggtaagaaggggtagaaaaaatg 27320204 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 13 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 73 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 133 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 193 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 253 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 313 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 373 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 412 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11512957 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 29 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 88 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 89 taaaggaggtggggg 103 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 32 gtcgagagggaaacagcccggatcaccagctaaggccc 69 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83819 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 83760 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83759 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 83700 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83699 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 83640 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83639 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 83580 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83579 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 83520 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83519 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 83460 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83459 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 83400 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83399 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 83340 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83339 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 83280 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 83279 ttttcagggtaagaaggggtagagaaaatg 83250
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118926 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 118867 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118866 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 118807 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118806 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 118747 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118746 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 118687 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118686 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 118627 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118626 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 118567 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118566 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118507 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118506 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 118447 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118446 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 118387 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 118386 ttttcagggtaagaaggggtagagaaaatg 118357 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96192 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 96251 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96252 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 96311 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96312 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 96371 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96372 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 96431 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96432 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 96491 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96492 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 96551 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96552 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96611 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96612 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 96671 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96672 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 96731 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 96732 ttttcagggtaagaaggggtagagaaaatg 96761
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123240 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 123299 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123300 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 123359 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123360 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 123419 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123420 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 123479 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123480 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 123539 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123540 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 123599 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123600 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 123659 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123660 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 123719 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123720 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 123779 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 123780 ttttcagggtaagaaggggtagagaaaatg 123809 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14966 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 15025 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15026 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 15085 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15086 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 15145 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15146 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 15205 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15206 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 15265 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15266 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 15325 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15326 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 15385 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15386 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 15445 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15446 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 15505 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 15506 ttttcagggtaagaaggggtagagaaaatg 15535
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141774 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 141833 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141834 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 141893 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141894 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 141953 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141954 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 142013 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142014 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 142073 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142074 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 142133 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142134 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 142193 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142194 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 142253 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142254 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 142313 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 142314 ttttcagggtaagaaggggtagagaaaatg 142343
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269126 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 9269185 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269186 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 9269245 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269246 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 9269305 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269306 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 9269365 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269366 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 9269425 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269426 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 9269485 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269486 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 9269545 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269546 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 9269605 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269606 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 9269665 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 9269666 ttttcagggtaagaaggggtagagaaaatg 9269695 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228626 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 9228685 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228686 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 9228745 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228746 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 9228805 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228806 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 9228865 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228866 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 9228925 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228926 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 9228985 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228986 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 9229045 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229046 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 9229105 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229106 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 9229165 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 9229166 ttttcagggtaagaaggggtagagaaaatg 9229195 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165214 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 9165273 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165274 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 9165333 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165334 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 9165393 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165394 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 9165453 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165454 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 9165513 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165514 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 9165573 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165574 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 9165633 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165634 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 9165693 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165694 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 9165753 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 9165754 ttttcagggtaagaaggggtagagaaaatg 9165783 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057040 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 9057099 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057100 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 9057159 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057160 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 9057219 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057220 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 9057279 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057280 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 9057339 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057340 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 9057399 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057400 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 9057459 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057460 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 9057519 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057520 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 9057579 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 9057580 ttttcagggtaagaaggggtagagaaaatg 9057609 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 464 cccttgttggtacggagggacggaggaggctaggttagccgaaagatggttataggtt 521 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5792165 cccttattggtacggagggacggaggaggctaggttagccaaaagatggttataggtt 5792222
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939111 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 19939170 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939171 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 19939230 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939231 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 19939290 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939291 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 19939350 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939351 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 19939410 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939411 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 19939470 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939471 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 19939530 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939531 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 19939590 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939591 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 19939650 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 19939651 ttttcagggtaagaaggggtagagaaaatg 19939680 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276320 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 10276261 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276260 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 10276201 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276200 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 10276141 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10276140 gctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggt 10276081 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276080 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 10276021 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276020 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 10275961 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275960 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 10275901 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275900 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 10275841 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275840 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 10275781 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 10275780 ttttcagggtaagaaggggtagagaaaatg 10275751 Score = 1114 bits (562), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387978 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 10388037 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388038 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 10388097 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388098 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 10388157 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388158 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 10388217 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388218 aggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 10388277 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388278 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 10388337 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10388338 ggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaag 10388397 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388398 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 10388457 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388458 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 10388517 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 10388518 ttttcagggtaagaaggggtagagaaaatg 10388547 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 169 gatcgagcgcccttgcgctgaagatgaacggggctaagc 207 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 110 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 169 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241155 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 9241096 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241095 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 9241036 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241035 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 9240976 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240975 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 9240916 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240915 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 9240856 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240855 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 9240796 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240795 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 9240736 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240735 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 9240676 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240675 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 9240616 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 9240615 ttttcagggtaagaaggggtagagaaaatg 9240586 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 57 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 110 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 111 acagccaggaggtttgcctagaagcagccaccctttaaagag 152 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 89.7 bits (45), Expect = 9e-15 Identities = 55/57 (96%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 518 ggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 3579876 ggtttaaggacacaaggtgaccctcctttttcagggtaagaa-gggtagagaaaatg 3579821 Score = 81.8 bits (41), Expect = 2e-12 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaac-agcccggatcaccagcta 63 ||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||| Sbjct: 3580448 gtgagacgatgggggataagcttcatcgtcgagagagaaacaaccccaaatcaccagcta 3580389 Query: 64 aggcc 68 ||||| Sbjct: 3580388 aggcc 3580384 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 218 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 264 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 |||||||| |||| |||||||| |||| |||| | ||||||||||||||||| Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatcaggc 22198978 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 182 tgcgctgaagatgaacggggctaagcgatctgccgaagct 221 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 56 accagctaaggcccctaaatgaccgctcagtgataaagga 95 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599293 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 31599352 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599353 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 31599412 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599413 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 31599472 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599473 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 31599532 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599533 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 31599592 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599593 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 31599652 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599653 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 31599712 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599713 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 31599772 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599773 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 31599832 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 31599833 ttttcagggtaagaaggggtagagaaaatg 31599862 Score = 888 bits (448), Expect = 0.0 Identities = 457/460 (99%) Strand = Plus / Minus Query: 115 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 175 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 235 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 295 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 354 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 355 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 414 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27411687 Query: 415 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411686 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27411627 Query: 475 acggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaagg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411626 acggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaagg 27411567 Query: 535 tgaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||| |||||| Sbjct: 27411566 tgaccctgctttttcagggtaagaaggggtagaaaaaatg 27411527 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 13 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 73 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 133 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 193 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 253 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 313 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 373 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 412 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11509720 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 29 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 88 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 89 taaaggaggtggggg 103 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 32 gtcgagagggaaacagcccggatcaccagctaaggccc 69 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46932 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 46873 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46872 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 46813 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46812 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 46753 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46752 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 46693 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46692 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 46633 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46632 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 46573 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46572 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 46513 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46512 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 46453 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46452 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 46393 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 46392 ttttcagggtaagaaggggtagagaaaatg 46363
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52368 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 52309 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52308 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 52249 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52248 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 52189 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52188 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 52129 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52128 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 52069 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52068 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 52009 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52008 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 51949 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51948 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 51889 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51888 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 51829 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 51828 ttttcagggtaagaaggggtagagaaaatg 51799
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 637 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 697 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 757 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 817 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 877 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 937 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 997 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 1057 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 1117 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 1118 ttttcagggtaagaaggggtagagaaaatg 1147
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 167 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 227 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 287 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 347 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 407 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 467 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 527 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 587 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 588 ttttcagggtaagaaggggtagagaaaatg 617
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 832 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 892 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 952 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 1012 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 1072 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 1132 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1192 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 1252 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 1312 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 1313 ttttcagggtaagaaggggtagagaaaatg 1342
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 703 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 763 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 823 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 883 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 943 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 1003 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1063 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 1123 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1124 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 1183 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 1184 ttttcagggtaagaaggggtagagaaaatg 1213
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 832 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 892 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 952 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 1012 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 1072 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 1132 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1192 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 1252 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 1312 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 1313 ttttcagggtaagaaggggtagagaaaatg 1342
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950387 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 19950446 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950447 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 19950506 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950507 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 19950566 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950567 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 19950626 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950627 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 19950686 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950687 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 19950746 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950747 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 19950806 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950807 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 19950866 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950867 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 19950926 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 19950927 ttttcagggtaagaaggggtagagaaaatg 19950956 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282359 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 10282300 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282299 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 10282240 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282239 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 10282180 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10282179 gctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggt 10282120 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282119 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 10282060 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282059 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 10282000 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281999 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 10281940 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281939 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 10281880 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281879 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 10281820 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 10281819 ttttcagggtaagaaggggtagagaaaatg 10281790 Score = 1114 bits (562), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394017 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 10394076 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394077 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 10394136 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394137 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 10394196 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394197 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 10394256 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394257 aggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 10394316 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394317 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 10394376 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10394377 ggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaag 10394436 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394437 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 10394496 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394497 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 10394556 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 10394557 ttttcagggtaagaaggggtagagaaaatg 10394586 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 169 gatcgagcgcccttgcgctgaagatgaacggggctaagc 207 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 110 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 169 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118900 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 118841 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118840 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 118781 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118780 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 118721 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118720 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 118661 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118660 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 118601 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118600 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 118541 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118540 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118481 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118480 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 118421 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118420 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 118361 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 118360 ttttcagggtaagaaggggtagagaaaatg 118331 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96139 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 96198 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96199 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 96258 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96259 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 96318 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96319 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 96378 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96379 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 96438 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96439 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 96498 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96499 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96558 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96559 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 96618 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96619 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 96678 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 96679 ttttcagggtaagaaggggtagagaaaatg 96708
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 119033 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 118973 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 118913 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 118853 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118852 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 118793 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118792 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 118733 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118732 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118673 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118672 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 118613 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118612 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 118553 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 118552 ttttcagggtaagaaggggtagagaaaatg 118523 Score = 1130 bits (570), Expect = 0.0 Identities = 570/570 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95802 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 95861 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95862 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 95921 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95922 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 95981 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95982 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 96041 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96042 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 96101 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96102 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 96161 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96162 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96221 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96222 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 96281 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96282 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 96341 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 96342 ttttcagggtaagaaggggtagagaaaatg 96371
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117873 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 117814 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117813 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 117754 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117753 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 117694 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117693 gctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggt 117634 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117633 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 117574 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117573 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 117514 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117513 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 117454 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117453 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 117394 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117393 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 117334 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 117333 ttttcagggtaagaaggggtagagaaaatg 117304
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43916 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 43857 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43856 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 43797 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43796 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 43737 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43736 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 43677 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 43676 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 43617 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43616 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 43557 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43556 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 43497 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43496 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 43437 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43436 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 43377 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 43376 ttttcagggtaagaaggggtagagaaaatg 43347 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21201 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 21260 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21261 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 21320 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21321 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 21380 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21381 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 21440 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 21441 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 21500 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21501 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 21560 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21561 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 21620 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21621 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 21680 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21681 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 21740 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 21741 ttttcagggtaagaaggggtagagaaaatg 21770
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57645 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 57586 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57585 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 57526 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57525 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 57466 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 57465 gctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggt 57406 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57405 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 57346 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57345 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 57286 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57285 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 57226 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57225 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 57166 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57165 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 57106 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 57105 ttttcagggtaagaaggggtagagaaaatg 57076
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122756 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 122697 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122696 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 122637 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122636 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 122577 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122576 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 122517 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122516 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 122457 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122456 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 122397 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122396 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 122337 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122336 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 122277 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122276 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 122217 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 122216 ttttcagggtaagaaggggtagagaaaatg 122187 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100081 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 100140 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100141 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 100200 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100201 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 100260 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100261 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 100320 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100321 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 100380 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100381 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 100440 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100441 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 100500 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100501 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 100560 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100561 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 100620 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 100621 ttttcagggtaagaaggggtagagaaaatg 100650
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 455 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 515 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 575 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 635 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 636 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggttgacgaagcggaag 695 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 755 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 815 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 875 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 935 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 936 ttttcagggtaagaaggggtagagaaaatg 965
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123473 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 123414 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123413 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 123354 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123353 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 123294 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123293 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 123234 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123233 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 123174 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123173 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 123114 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123113 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 123054 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123053 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 122994 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122993 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 122934 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 122933 ttttcagggtaagaaggggtagagaaaatg 122904 Score = 1122 bits (566), Expect = 0.0 Identities = 569/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100758 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 100817 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100818 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 100877 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100878 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 100937 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100938 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 100997 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100998 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 101057 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101058 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 101117 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101118 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 101177 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101178 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 101237 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101238 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 101297 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 101298 ttttcagggtaagaaggggtagagaaaatg 101327
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1114 bits (562), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94370 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94429 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94430 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 94489 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94490 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 94549 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94550 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 94609 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94610 aggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 94669 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94670 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 94729 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 94730 ggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaag 94789 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94790 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 94849 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94850 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 94909 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 94910 ttttcagggtaagaaggggtagagaaaatg 94939
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1114 bits (562), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28434 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 28493 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28494 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 28553 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28554 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 28613 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28614 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 28673 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28674 aggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 28733 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28734 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 28793 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 28794 ggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaag 28853 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28854 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 28913 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28914 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 28973 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 28974 ttttcagggtaagaaggggtagagaaaatg 29003
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1074 bits (542), Expect = 0.0 Identities = 545/546 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 487 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 427 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 367 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 307 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 306 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 247 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 187 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 127 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 67 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 7 Query: 545 ttttca 550 |||||| Sbjct: 6 ttttca 1
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1059 bits (534), Expect = 0.0 Identities = 562/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122697 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 122638 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122637 ggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtt 122578 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 122577 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgc 122519 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122518 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 122459 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122458 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 122399 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122398 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 122339 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122338 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 122279 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122278 gctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 122219 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122218 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 122159 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 122158 ttttcagggtaagaaggggtagagaaaatg 122129 Score = 1059 bits (534), Expect = 0.0 Identities = 562/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100040 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 100099 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 100100 ggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtt 100159 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 100160 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgc 100218 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100219 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 100278 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100279 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 100338 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100339 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 100398 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100399 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 100458 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100459 gctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 100518 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100519 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 100578 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 100579 ttttcagggtaagaaggggtagagaaaatg 100608
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1059 bits (534), Expect = 0.0 Identities = 562/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6393 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 6452 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 6453 ggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtt 6512 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 6513 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgc 6571 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6572 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 6631 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6632 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 6691 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6692 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 6751 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6752 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 6811 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6812 gctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 6871 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6872 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 6931 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 6932 ttttcagggtaagaaggggtagagaaaatg 6961
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1059 bits (534), Expect = 0.0 Identities = 562/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1040 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1041 ggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtt 1100 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 1101 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgc 1159 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1160 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 1219 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1220 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 1279 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1280 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 1339 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1399 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1400 gctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 1459 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 1519 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 1520 ttttcagggtaagaaggggtagagaaaatg 1549
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 1009 bits (509), Expect = 0.0 Identities = 548/561 (97%) Strand = Plus / Minus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||| |||||||||| || || ||||||||||||||| ||||||||||||| ||| Sbjct: 595 tgggggaaaagcttcatcatctcgaaagaaacagcccggatccccagctaaggcccttaa 536 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 ||||||||||| ||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 535 atgaccgctcaatgataaaggaggtgggggtgcaaagccagccatgaagtttgcctagaa 476 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 416 Query: 194 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 356 Query: 254 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 313 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 355 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 296 Query: 314 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 236 Query: 374 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 176 Query: 434 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 116 Query: 494 taggttagccgaaagatggttataggtttaaggacacaaggtgaccctgctttttcaggg 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 taggttagccgaaagatggttataggtttaaggacacaaggtgaccctgctttttcaggg 56 Query: 554 taagaaggggtagagaaaatg 574 ||||||||||||||||||||| Sbjct: 55 taagaaggggtagagaaaatg 35
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138534 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 138475 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 138474 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 138415 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 138414 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 138355 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138354 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 138295 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||| ||||| |||||| || ||||||||||||| Sbjct: 138294 aggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaag 138235 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138234 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaa 138175 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138174 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 138115 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 138114 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 138055 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| Sbjct: 138054 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgct 137995 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 137994 ttttcagggtaagaaggggtagagaaaatg 137965 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110563 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 110622 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 110623 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 110682 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 110683 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 110742 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110743 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 110802 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||| ||||| |||||| || ||||||||||||| Sbjct: 110803 aggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaag 110862 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110863 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaa 110922 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110923 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 110982 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 110983 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 111042 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| Sbjct: 111043 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgct 111102 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 111103 ttttcagggtaagaaggggtagagaaaatg 111132
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126897 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 126838 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 126837 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 126778 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 126777 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 126718 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126717 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 126658 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| ||||| |||| || || ||||||||||||| Sbjct: 126657 aggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaag 126598 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 126597 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 126538 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126537 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 126478 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 126477 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 126418 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct: 126417 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccttgct 126358 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||| ||||| Sbjct: 126357 ttttcagggtaagaaggggtagaggaaatg 126328 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108025 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 108084 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 108085 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 108144 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 108145 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 108204 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108205 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 108264 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| ||||| |||| || || ||||||||||||| Sbjct: 108265 aggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaag 108324 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 108325 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 108384 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108385 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 108444 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 108445 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 108504 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct: 108505 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccttgct 108564 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||| ||||| Sbjct: 108565 ttttcagggtaagaaggggtagaggaaatg 108594
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132989 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 132930 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 132929 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 132870 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 132869 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 132810 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132809 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 132750 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||| Sbjct: 132749 aggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaag 132690 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132689 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaa 132630 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132629 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 132570 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 132569 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 132510 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 132509 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgtccctgtt 132450 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 132449 ttttcagggtaagaaggggtagagaaaatg 132420 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105660 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 105719 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 105720 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 105779 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105780 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 105839 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105840 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 105899 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||| Sbjct: 105900 aggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaag 105959 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105960 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaa 106019 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106020 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106079 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 106080 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 106139 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 106140 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgtccctgtt 106199 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 106200 ttttcagggtaagaaggggtagagaaaatg 106229
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138739 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 138680 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 138679 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 138620 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 138619 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 138560 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 138559 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 138500 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||| Sbjct: 138499 aggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaag 138440 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 138439 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 138380 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138379 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 138320 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 138319 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 138260 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| Sbjct: 138259 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgct 138200 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 138199 ttttcagggtaagaaggggtagagaaaatg 138170 Score = 963 bits (486), Expect = 0.0 Identities = 549/570 (96%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110560 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 110619 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 110620 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 110679 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 110680 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 110739 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 110740 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 110799 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||| Sbjct: 110800 aggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaag 110859 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 110860 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 110919 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110920 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 110979 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 110980 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 111039 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| Sbjct: 111040 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgct 111099 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 111100 ttttcagggtaagaaggggtagagaaaatg 111129
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 955 bits (482), Expect = 0.0 Identities = 548/570 (96%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132028 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 131969 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 131968 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 131909 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 131908 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 131849 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131848 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 131789 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||| Sbjct: 131788 aggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaag 131729 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131728 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaa 131669 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131668 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 131609 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 131608 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 131549 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || ||||||| ||||| | Sbjct: 131548 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgcaaggtgtccctgtt 131489 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 131488 ttttcagggtaagaaggggtagagaaaatg 131459 Score = 955 bits (482), Expect = 0.0 Identities = 548/570 (96%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104736 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 104795 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 104796 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 104855 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 104856 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 104915 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104916 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 104975 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||| Sbjct: 104976 aggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaag 105035 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105036 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaa 105095 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105096 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 105155 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 105156 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 105215 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || ||||||| ||||| | Sbjct: 105216 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgcaaggtgtccctgtt 105275 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 105276 ttttcagggtaagaaggggtagagaaaatg 105305
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 955 bits (482), Expect = 0.0 Identities = 485/486 (99%) Strand = Plus / Plus Query: 89 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 149 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 209 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 269 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 329 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 300 Query: 389 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 301 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacgggtca 360 Query: 449 atattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaag 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaag 420 Query: 509 atggttataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggtagag 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 atggttataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggtagag 480 Query: 569 aaaatg 574 |||||| Sbjct: 481 aaaatg 486
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130697 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 130638 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 130637 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 130578 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 130577 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 130518 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 130517 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 130458 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||||| || ||||||||||||| Sbjct: 130457 aggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaag 130398 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 130397 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 130338 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130337 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 130278 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 130277 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 130218 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 130217 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 130158 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 130157 ttttcagggtaagaaggggtagagaaaatg 130128 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103938 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 103997 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 103998 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 104057 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 104058 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 104117 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 104118 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 104177 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||||| || ||||||||||||| Sbjct: 104178 aggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaag 104237 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 104238 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 104297 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104298 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 104357 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 104358 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 104417 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 104418 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 104477 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 104478 ttttcagggtaagaaggggtagagaaaatg 104507
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135622 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135563 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135562 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135503 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135502 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135443 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135442 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135383 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 135382 aggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaag 135323 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135322 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 135263 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135262 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 135203 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 135202 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 135143 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 135142 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 135083 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 135082 ttttcagggtaagaaggggtagagaaaatg 135053 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106803 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106862 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106863 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106922 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106923 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106982 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 106983 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107042 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 107043 aggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaag 107102 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107103 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107162 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107163 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107222 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 107223 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 107282 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 107283 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 107342 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 107343 ttttcagggtaagaaggggtagagaaaatg 107372
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133253 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 133194 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 133193 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 133134 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 133133 tgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 133074 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133073 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 133014 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| |||| || || ||||||||||||| Sbjct: 133013 aggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaag 132954 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 132953 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 132894 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132893 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 132834 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 132833 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 132774 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 132773 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 132714 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||| ||||| Sbjct: 132713 ttttcagggtaagaaggggtagaggaaatg 132684 Score = 940 bits (474), Expect = 0.0 Identities = 546/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104718 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 104777 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 104778 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 104837 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 104838 tgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 104897 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104898 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 104957 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| |||| || || ||||||||||||| Sbjct: 104958 aggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaag 105017 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 105018 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 105077 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105078 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 105137 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 105138 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 105197 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 105198 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 105257 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||| ||||| Sbjct: 105258 ttttcagggtaagaaggggtagaggaaatg 105287
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131805 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 131746 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 131745 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 131686 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 131685 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 131626 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 131625 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 131566 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||||| || ||||||||||||| Sbjct: 131565 aggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaag 131506 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 131505 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 131446 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131445 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 131386 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 131385 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 131326 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 131325 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 131266 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 131265 ttttcagggtaagaaggggtagagaaaatg 131236 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105073 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 105132 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 105133 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 105192 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105193 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 105252 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 105253 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 105312 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||||| || ||||||||||||| Sbjct: 105313 aggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaag 105372 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 105373 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 105432 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105433 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 105492 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 105493 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 105552 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 105553 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 105612 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 105613 ttttcagggtaagaaggggtagagaaaatg 105642
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1028 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1029 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1088 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1089 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1148 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 1208 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||| Sbjct: 1209 aggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaag 1268 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1269 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaa 1328 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1329 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1388 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 1389 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 1448 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||| | Sbjct: 1449 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgtcccggtg 1508 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 | |||||||||| ||||||||||||||||| Sbjct: 1509 tgttcagggtaaaaaggggtagagaaaatg 1538
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131798 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 131739 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 131738 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 131679 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 131678 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 131619 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 131618 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 131559 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||||| || ||||||||||||| Sbjct: 131558 aggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaag 131499 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 131498 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 131439 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131438 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 131379 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 131378 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 131319 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 131318 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 131259 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 131258 ttttcagggtaagaaggggtagagaaaatg 131229 Score = 932 bits (470), Expect = 0.0 Identities = 545/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105071 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 105130 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 105131 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 105190 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105191 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 105250 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 105251 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 105310 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||||| || ||||||||||||| Sbjct: 105311 aggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaag 105370 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 105371 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 105430 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105431 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 105490 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 105491 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 105550 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||| Sbjct: 105551 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgtaaggtgaccctgct 105610 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 105611 ttttcagggtaagaaggggtagagaaaatg 105640
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 926 bits (467), Expect = 0.0 Identities = 546/571 (95%), Gaps = 1/571 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138610 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 138551 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 138550 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 138491 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 138490 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 138431 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138430 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 138371 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 138370 aggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaag 138311 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 138310 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 138251 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138250 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 138191 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 138190 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 138131 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgc- 543 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||| Sbjct: 138130 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccttgct 138071 Query: 544 tttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||| ||||| Sbjct: 138070 tttttcagggtaagaaggggtagaggaaatg 138040 Score = 926 bits (467), Expect = 0.0 Identities = 546/571 (95%), Gaps = 1/571 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 111394 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 111395 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 111454 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 111455 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 111514 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111515 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 111574 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 111575 aggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaag 111634 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 111635 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 111694 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111695 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 111754 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 111755 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 111814 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgc- 543 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||| Sbjct: 111815 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccttgct 111874 Query: 544 tttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||| ||||| Sbjct: 111875 tttttcagggtaagaaggggtagaggaaatg 111905 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 385 tccacggagggtgagtcagggcct 408 |||||||||||||||||||||||| Sbjct: 144327 tccacggagggtgagtcagggcct 144304 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 385 tccacggagggtgagtcagggcct 408 |||||||||||||||||||||||| Sbjct: 105618 tccacggagggtgagtcagggcct 105641
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 922 bits (465), Expect = 0.0 Identities = 543/569 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1030 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1031 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1090 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1091 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1150 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 1151 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggt 1210 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||| | ||| ||| | ||| ||||||||||||| Sbjct: 1211 aggggagcgttccgccttagggggaagcacctgcgcgagcagcggtagacgaagcggaag 1270 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1271 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1330 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1390 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 1391 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 1450 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| Sbjct: 1451 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgct 1510 Query: 545 ttttcagggtaagaaggggtagagaaaat 573 ||||||||||||||||||||||||||||| Sbjct: 1511 ttttcagggtaagaaggggtagagaaaat 1539
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 914 bits (461), Expect = 0.0 Identities = 542/569 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134931 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134872 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134871 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134812 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134811 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134752 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134751 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 134692 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| | || ||||||||||||| Sbjct: 134691 aggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaag 134632 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134631 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134572 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134571 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134512 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 134511 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 134452 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 134451 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgtt 134392 Query: 545 ttttcagggtaagaaggggtagagaaaat 573 |||| ||||||||||| |||||||||||| Sbjct: 134391 tttttagggtaagaagaggtagagaaaat 134363 Score = 914 bits (461), Expect = 0.0 Identities = 542/569 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106975 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107034 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107035 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107094 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107095 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107154 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107155 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 107214 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| | || ||||||||||||| Sbjct: 107215 aggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaag 107274 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107275 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107334 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107335 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107394 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 107395 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 107454 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 107455 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgtt 107514 Query: 545 ttttcagggtaagaaggggtagagaaaat 573 |||| ||||||||||| |||||||||||| Sbjct: 107515 tttttagggtaagaagaggtagagaaaat 107543
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 914 bits (461), Expect = 0.0 Identities = 542/569 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135210 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135151 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135150 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135091 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135090 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135031 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135030 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 134971 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| | || ||||||||||||| Sbjct: 134970 aggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaag 134911 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134910 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134851 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134850 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134791 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 134790 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 134731 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 134730 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgtt 134671 Query: 545 ttttcagggtaagaaggggtagagaaaat 573 |||| ||||||||||| |||||||||||| Sbjct: 134670 tttttagggtaagaagaggtagagaaaat 134642 Score = 914 bits (461), Expect = 0.0 Identities = 542/569 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107197 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107256 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107257 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107316 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107317 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107376 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107377 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 107436 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| | || ||||||||||||| Sbjct: 107437 aggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaag 107496 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107497 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107556 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107557 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107616 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 107617 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 107676 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 107677 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgtt 107736 Query: 545 ttttcagggtaagaaggggtagagaaaat 573 |||| ||||||||||| |||||||||||| Sbjct: 107737 tttttagggtaagaagaggtagagaaaat 107765
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135968 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135909 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135908 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135849 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135848 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135789 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135788 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135729 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||| || ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 135728 aggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaag 135669 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135668 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 135609 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135608 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 135549 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 135548 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 135489 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 135488 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 135429 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 135428 ttttcagggtaagaaggggtagagaaaatg 135399 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107589 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107648 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107649 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107708 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107709 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107768 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107769 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107828 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||| || ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107829 aggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaag 107888 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107889 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107948 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107949 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 108008 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 108009 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 108068 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 108069 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 108128 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 108129 ttttcagggtaagaaggggtagagaaaatg 108158
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134576 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134517 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134516 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134457 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134456 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134397 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134396 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134337 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134336 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134277 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134276 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134217 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134216 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134157 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134156 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134097 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134096 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134037 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 134036 ttttcagggtaagaaggggtagagaaaatg 134007 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106460 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106519 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106520 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106579 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106580 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106639 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106640 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106699 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106700 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106759 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106760 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106819 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106820 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106879 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 106880 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 106939 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 106940 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 106999 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 107000 ttttcagggtaagaaggggtagagaaaatg 107029
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134711 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134652 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134651 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134592 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134591 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134532 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134531 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134472 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134471 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134412 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134411 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134352 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134351 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134292 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134291 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134232 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134231 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134172 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 134171 ttttcagggtaagaaggggtagagaaaatg 134142 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106632 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106691 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106692 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106751 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106752 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106811 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106812 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106871 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106872 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106931 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106932 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106991 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106992 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107051 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 107052 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 107111 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 107112 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 107171 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 107172 ttttcagggtaagaaggggtagagaaaatg 107201
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134709 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134650 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134649 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134590 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134589 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134530 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134529 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134470 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134469 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134410 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134409 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134350 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134349 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134290 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134289 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134230 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134229 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134170 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 134169 ttttcagggtaagaaggggtagagaaaatg 134140 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106688 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106689 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106748 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106749 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106808 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106809 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106868 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106869 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106928 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106929 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106988 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106989 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107048 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 107049 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 107108 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 107109 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 107168 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 107169 ttttcagggtaagaaggggtagagaaaatg 107198
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134621 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134562 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134561 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134502 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134501 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134442 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134441 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134382 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134381 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134322 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134321 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134262 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134261 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134202 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134201 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134142 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134141 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134082 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 134081 ttttcagggtaagaaggggtagagaaaatg 134052 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106507 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106566 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106567 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106626 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106627 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106686 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106687 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106746 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106747 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106806 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106807 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106866 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106867 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106926 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 106927 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 106986 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 106987 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 107046 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 107047 ttttcagggtaagaaggggtagagaaaatg 107076
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135059 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135000 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134999 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134940 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134939 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134880 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 134879 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 134820 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134819 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134760 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134759 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134700 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134699 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134640 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 134639 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 134580 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134579 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134520 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 134519 ttttcagggtaagaaggggtagagaaaatg 134490 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107079 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107138 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107139 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107198 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107199 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107258 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107259 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107318 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107319 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 107378 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107379 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107438 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107439 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107498 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 107499 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 107558 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 107559 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 107618 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 107619 ttttcagggtaagaaggggtagagaaaatg 107648
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134588 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134529 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134528 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134469 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134468 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134409 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134408 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134349 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134348 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134289 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134288 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134229 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134228 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134169 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134168 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134109 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134108 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134049 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 134048 ttttcagggtaagaaggggtagagaaaatg 134019 Score = 908 bits (458), Expect = 0.0 Identities = 542/570 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106533 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106534 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106593 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106594 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106653 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106654 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106713 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106714 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106773 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106774 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106833 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106834 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106893 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 106894 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 106953 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 106954 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 107013 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 107014 ttttcagggtaagaaggggtagagaaaatg 107043
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135330 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135271 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135270 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135211 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135210 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135151 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135150 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135091 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 135090 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 135031 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135030 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134971 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134970 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134911 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 134910 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 134851 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134850 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134791 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||||||||||| Sbjct: 134790 ttgtcagggtaagaaggggtagagaaaatg 134761 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107300 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107359 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107360 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107419 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107420 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107479 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107480 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107539 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107540 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 107599 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107600 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107659 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107660 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107719 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 107720 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 107779 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 107780 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 107839 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||||||||||| Sbjct: 107840 ttgtcagggtaagaaggggtagagaaaatg 107869
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 900 bits (454), Expect = 0.0 Identities = 548/579 (94%), Gaps = 9/579 (1%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139397 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 139338 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 139337 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 139278 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 139277 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 139218 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa-------tg 237 || ||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 139217 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatg 139158 Query: 238 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc--gacg 295 |||||||||||||||||||||||||||||||||||| ||||| ||| || || |||| Sbjct: 139157 catcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacg 139098 Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139097 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 139038 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139037 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 138978 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 475 |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 138977 ggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactaccccttgttggtc 138918 Query: 476 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 | ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 138917 ccgagggacggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggt 138858 Query: 536 gaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||||||||| Sbjct: 138857 gaccctgctttttcagggtaagaaggggtagagaaaatg 138819 Score = 900 bits (454), Expect = 0.0 Identities = 548/579 (94%), Gaps = 9/579 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110663 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 110722 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 110723 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 110782 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 110783 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 110842 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa-------tg 237 || ||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 110843 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatg 110902 Query: 238 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc--gacg 295 |||||||||||||||||||||||||||||||||||| ||||| ||| || || |||| Sbjct: 110903 catcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacg 110962 Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110963 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 111022 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111023 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 111082 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 475 |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 111083 ggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactaccccttgttggtc 111142 Query: 476 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 | ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 111143 ccgagggacggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggt 111202 Query: 536 gaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||||||||| Sbjct: 111203 gaccctgctttttcagggtaagaaggggtagagaaaatg 111241
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141909 gtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaa 141850 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 141849 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtt 141790 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 141789 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 141730 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 141729 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 141670 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 141669 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 141610 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 141609 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 141550 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141549 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 141490 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 141489 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 141430 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||||||| || |||||| ||||||| Sbjct: 141429 ggaggaggctaggttagccgaaagatggttatcggtttaagaacgtaaggtgtccctgct 141370 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||| ||||||| Sbjct: 141369 ttgtcagggtaagaaggggtagtgaaaatg 141340 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111419 gtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaa 111478 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 111479 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtt 111538 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 111539 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 111598 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 111599 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 111658 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 111659 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 111718 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 111719 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 111778 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111779 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 111838 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 111839 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 111898 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||||||| || |||||| ||||||| Sbjct: 111899 ggaggaggctaggttagccgaaagatggttatcggtttaagaacgtaaggtgtccctgct 111958 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||| ||||||| Sbjct: 111959 ttgtcagggtaagaaggggtagtgaaaatg 111988
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2494 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 2553 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2554 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 2613 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2614 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 2673 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2674 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 2733 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 2734 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 2793 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 2794 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 2853 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2854 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 2913 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 2914 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 2973 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 2974 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 3033 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||||||||||| Sbjct: 3034 ttgtcagggtaagaaggggtagagaaaatg 3063
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135328 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135269 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135268 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135209 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135208 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135149 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135148 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135089 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 135088 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 135029 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135028 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134969 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134968 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134909 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 134908 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 134849 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 134848 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 134789 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||||||||||| Sbjct: 134788 ttgtcagggtaagaaggggtagagaaaatg 134759 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107298 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107357 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107358 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107417 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107418 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107477 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107478 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107537 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107538 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 107597 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107598 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107657 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107658 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107717 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 107718 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 107777 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 107778 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 107837 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||||||||||| Sbjct: 107838 ttgtcagggtaagaaggggtagagaaaatg 107867
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 129560 gtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 129501 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 129500 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 129441 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 129440 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 129381 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 129380 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggt 129321 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||| | ||||| ||| | ||| ||||||||||||| Sbjct: 129320 aggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaag 129261 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 129260 cgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaa 129201 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129200 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 129141 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 129140 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 129081 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 129080 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgtt 129021 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 129020 ttttcagggtaagaaggggtagagaaaatg 128991 Score = 900 bits (454), Expect = 0.0 Identities = 541/570 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 102896 gtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 102955 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 102956 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 103015 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 103016 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 103075 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 103076 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggt 103135 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||| | ||||| ||| | ||| ||||||||||||| Sbjct: 103136 aggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaag 103195 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 103196 cgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaa 103255 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103256 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 103315 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 103316 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 103375 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 103376 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgtt 103435 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 103436 ttttcagggtaagaaggggtagagaaaatg 103465
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 894 bits (451), Expect = 0.0 Identities = 545/575 (94%), Gaps = 6/575 (1%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134021 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 133962 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 133961 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 133902 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 133901 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 133842 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133841 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 133782 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||| ||||||||||||| ||||| ||| || || ||||||||||||| Sbjct: 133781 aggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaag 133723 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 133722 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 133663 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133662 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 133603 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 133602 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 133543 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct: 133542 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccttgct 133483 Query: 545 tttt-----cagggtaagaaggggtagagaaaatg 574 |||| |||||||||||||||||||| ||||| Sbjct: 133482 ttttcagggcagggtaagaaggggtagaggaaatg 133448 Score = 894 bits (451), Expect = 0.0 Identities = 545/575 (94%), Gaps = 6/575 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106261 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106320 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106321 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106380 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106381 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106440 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106441 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 106500 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||| ||||||||||||| ||||| ||| || || ||||||||||||| Sbjct: 106501 aggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaag 106559 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106560 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106619 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106620 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106679 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 106680 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 106739 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct: 106740 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccttgct 106799 Query: 545 tttt-----cagggtaagaaggggtagagaaaatg 574 |||| |||||||||||||||||||| ||||| Sbjct: 106800 ttttcagggcagggtaagaaggggtagaggaaatg 106834
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 892 bits (450), Expect = 0.0 Identities = 545/575 (94%), Gaps = 5/575 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141137 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 141078 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 141077 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 141018 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 141017 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 140958 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 140957 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 140898 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 140897 aggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaag 140838 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 140837 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 140778 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140777 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 140718 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 140717 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 140658 Query: 485 ggaggaggctaggttagccgaaagatgg-ttataggtttaaggacacaaggtgaccctgc 543 |||||||||||||||||||||||| ||| |||| |||| |||||| |||||||||| ||| Sbjct: 140657 ggaggaggctaggttagccgaaaggtggtttatcggttcaaggacgcaaggtgaccttgc 140598 Query: 544 ----tttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||| ||||| Sbjct: 140597 tttttttttcagggtaagaaggggtagaggaaatg 140563 Score = 892 bits (450), Expect = 0.0 Identities = 545/575 (94%), Gaps = 5/575 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112520 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 112579 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 112580 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 112639 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 112640 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 112699 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 112700 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 112759 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 112760 aggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaag 112819 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 112820 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 112879 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112880 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 112939 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 112940 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 112999 Query: 485 ggaggaggctaggttagccgaaagatgg-ttataggtttaaggacacaaggtgaccctgc 543 |||||||||||||||||||||||| ||| |||| |||| |||||| |||||||||| ||| Sbjct: 113000 ggaggaggctaggttagccgaaaggtggtttatcggttcaaggacgcaaggtgaccttgc 113059 Query: 544 ----tttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||| ||||| Sbjct: 113060 tttttttttcagggtaagaaggggtagaggaaatg 113094
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 892 bits (450), Expect = 0.0 Identities = 540/570 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2739 gtgagacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaa 2798 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2799 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 2858 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 2859 tgcctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgc 2918 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2919 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 2978 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 2979 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 3038 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 3039 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 3098 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3099 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 3158 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 3159 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 3218 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 3219 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 3278 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||||||||||| Sbjct: 3279 ttgtcagggtaagaaggggtagagaaaatg 3308
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 888 bits (448), Expect = 0.0 Identities = 457/460 (99%) Strand = Plus / Minus Query: 115 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 175 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 235 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 295 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 354 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 355 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 414 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 20571 Query: 415 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20570 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 20511 Query: 475 acggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaagg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20510 acggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaagg 20451 Query: 535 tgaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||| |||||| Sbjct: 20450 tgaccctgctttttcagggtaagaaggggtagaaaaaatg 20411
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 886 bits (447), Expect = 0.0 Identities = 447/447 (100%) Strand = Plus / Plus Query: 18 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 78 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 138 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 198 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 258 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 318 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 378 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 420 Query: 438 acaacaggtcaatattcctgtactacc 464 ||||||||||||||||||||||||||| Sbjct: 421 acaacaggtcaatattcctgtactacc 447
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 884 bits (446), Expect = 0.0 Identities = 452/454 (99%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 395 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 335 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 275 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 215 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 214 aggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaag 155 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 95 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 35 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgt 458 ||||| |||||||||||||||||||||||||||| Sbjct: 34 gcgtactcgatggacaacaggtcaatattcctgt 1
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 884 bits (446), Expect = 0.0 Identities = 539/570 (94%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130897 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 130838 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 130837 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtt 130778 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 130777 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 130718 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| Sbjct: 130717 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggt 130658 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||| | ||||| ||| | | | ||||||||||||| Sbjct: 130657 aggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaag 130598 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 130597 cgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaa 130538 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130537 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaagg 130478 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||| Sbjct: 130477 gcgtagtcgatggacaacaggtgaatattcctgtactaccctttgttggtcccgagggac 130418 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| Sbjct: 130417 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgct 130358 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||| ||||||||||||||||| Sbjct: 130357 ttttcagggtaataaggggtagagaaaatg 130328 Score = 884 bits (446), Expect = 0.0 Identities = 539/570 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104497 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 104556 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 104557 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtt 104616 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 104617 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 104676 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| Sbjct: 104677 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggt 104736 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||| | ||||| ||| | | | ||||||||||||| Sbjct: 104737 aggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaag 104796 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 104797 cgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaa 104856 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104857 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaagg 104916 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||| Sbjct: 104917 gcgtagtcgatggacaacaggtgaatattcctgtactaccctttgttggtcccgagggac 104976 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| Sbjct: 104977 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgct 105036 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||| ||||||||||||||||| Sbjct: 105037 ttttcagggtaataaggggtagagaaaatg 105066
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 884 bits (446), Expect = 0.0 Identities = 540/570 (94%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1126 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1127 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1186 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1187 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1246 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1247 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 1306 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 1307 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 1366 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1367 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1426 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1427 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1486 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 || ||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 1487 gc-tagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 1545 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| ||| || |||||| ||||||| Sbjct: 1546 ggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtccctgct 1605 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 || ||||||||||||||||||||||||||| Sbjct: 1606 ttgtcagggtaagaaggggtagagaaaatg 1635
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 862 bits (435), Expect = 0.0 Identities = 538/571 (94%), Gaps = 1/571 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5190 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 5249 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 5250 ggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggtt 5309 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 5310 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 5369 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 5370 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggt 5429 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||||||| Sbjct: 5430 aggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaag 5489 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5490 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5549 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5550 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 5609 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||| Sbjct: 5610 gcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtcccgagggac 5669 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtg-accctgc 543 |||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||| Sbjct: 5670 ggaggaggctaggttagccgaaagatggttatcggttcaagaacacaaggtgccccctgt 5729 Query: 544 tttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||| Sbjct: 5730 tttttcagggtaagaaggggtagagaaaatg 5760
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 862 bits (435), Expect = 0.0 Identities = 538/571 (94%), Gaps = 1/571 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 22735 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 22676 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 22675 ggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggtt 22616 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 22615 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 22556 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 22555 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggt 22496 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||||||| Sbjct: 22495 aggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaag 22436 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 22435 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 22376 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22375 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 22316 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||| Sbjct: 22315 gcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtcccgagggac 22256 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtg-accctgc 543 |||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||| Sbjct: 22255 ggaggaggctaggttagccgaaagatggttatcggttcaagaacacaaggtgccccctgt 22196 Query: 544 tttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||| Sbjct: 22195 tttttcagggtaagaaggggtagagaaaatg 22165
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 844 bits (426), Expect = 0.0 Identities = 534/570 (93%), Gaps = 5/570 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 87232 gtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 87291 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 87292 ggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtt 87351 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 87352 tgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 87411 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 87412 gccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggt 87471 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||| |||| |||||| | ||| ||| || || ||||||||||||| Sbjct: 87472 aggggagcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaag 87531 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 87532 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 87591 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87592 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 87651 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 87652 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 87711 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 87712 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccc---- 87767 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||| Sbjct: 87768 -tttcagggtaagaaggggtagagaaaatg 87796
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 844 bits (426), Expect = 0.0 Identities = 429/430 (99%) Strand = Plus / Plus Query: 145 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 205 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 265 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 325 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 240 Query: 385 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacag 444 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 241 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgacggacaacag 300 Query: 445 gtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccg 360 Query: 505 aaagatggttataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aaagatggttataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggt 420 Query: 565 agagaaaatg 574 |||||||||| Sbjct: 421 agagaaaatg 430
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 839 bits (423), Expect = 0.0 Identities = 536/571 (93%), Gaps = 2/571 (0%) Strand = Plus / Plus Query: 5 gtgagacgatggggg-ataagcttcatcgtcgagagggaaacagcccggatcaccagcta 63 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1465 gtgagacgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 1524 Query: 64 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 123 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1525 aggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggt 1584 Query: 124 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 183 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 1585 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttg 1644 Query: 184 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 ||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1645 cgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcgg 1704 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 ||||||||||||||| |||| |||||||| | ||| ||| | |||||||||||| Sbjct: 1705 taggggagcgttccgtgttagggggaagcatcggcgcgagccatgccagacgaagcggaa 1764 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1765 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1824 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1825 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 1884 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 ||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||| Sbjct: 1885 ggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtagggcccgaggga 1944 Query: 484 cggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgc 543 ||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||| Sbjct: 1945 cggaggaggctaggttagccgaaagatggttatcggttcaaggacgaaaggtgaccctg- 2003 Query: 544 tttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||| Sbjct: 2004 tttttcagggtaagaaggggtagagaaaatg 2034
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 835 bits (421), Expect = 0.0 Identities = 533/570 (93%), Gaps = 4/570 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 89319 gtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 89378 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 89379 ggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtt 89438 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||| Sbjct: 89439 tgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgc 89498 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 89499 gccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 89558 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||| ||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 89559 aggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcggaag 89618 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 89619 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 89678 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89679 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 89738 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 89739 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 89798 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgct 544 |||||||||||||||||||||||||||||||| |||| |||||| |||||| |||| Sbjct: 89799 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggttaccc---- 89854 Query: 545 ttttcagggtaagaaggggtagagaaaatg 574 |||||||||||||||||||||||||||||| Sbjct: 89855 ttttcagggtaagaaggggtagagaaaatg 89884
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 829 bits (418), Expect = 0.0 Identities = 535/570 (93%), Gaps = 3/570 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 987 gtgagacgatgggggataagcttcatcgtcgagagggaaacagccctgatcacccgctaa 1046 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1047 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1106 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1107 tgc-tataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1165 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| Sbjct: 1166 gccgaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggt 1225 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||| ||||| |||||||| | ||| ||| | ||| ||||||||||||| Sbjct: 1226 aggggagcgttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcggaag 1285 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1286 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1345 Query: 365 ggtttcctccgcaaggttcgtccacgg-agggtgagtcagggcctaagatcaggccgaaa 423 || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1346 gggttcctccgcaaggttcgtccacggtagggtgagtcagggcctaagatcaggccgaaa 1405 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 ||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||| Sbjct: 1406 ggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgaggga 1465 Query: 484 cggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgc 543 ||||||||||||||||||||||||||||||||| |||| |||||| ||||||| |||||| Sbjct: 1466 cggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgcccctgc 1525 Query: 544 tttttcagggtaagaaggggtagagaaaat 573 ||||||||||||||||||||||||||||| Sbjct: 1526 -ttttcagggtaagaaggggtagagaaaat 1554
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 827 bits (417), Expect = 0.0 Identities = 420/421 (99%) Strand = Plus / Plus Query: 154 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 214 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 274 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 334 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 240 Query: 394 ggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 453 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtgagtcagggcctaggatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 300 Query: 454 cctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagatggt 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagatggt 360 Query: 514 tataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaat 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaat 420 Query: 574 g 574 | Sbjct: 421 g 421
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 821 bits (414), Expect = 0.0 Identities = 414/414 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 453 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 513 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 573 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 633 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 693 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 753 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 807
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 817 bits (412), Expect = 0.0 Identities = 522/555 (94%), Gaps = 4/555 (0%) Strand = Plus / Plus Query: 20 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 80 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 139 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 140 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 199 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 200 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 259 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 260 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 319 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 320 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 379 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 380 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 439 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 616 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaa--cgtagtcgatggac 673 Query: 440 aacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggtt 499 ||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||||| Sbjct: 674 aacaggtgaatattcctgtactaccctttgttggt-ccgagggacggaggaggctaggtt 732 Query: 500 agccgaaagatggttataggtttaaggacacaaggtgaccctgctttttcagggtaagaa 559 ||||||||||||||||| |||| |||||| || |||| ||||||||||||||||||| || Sbjct: 733 agccgaaagatggttatcggttcaaggacgcatggtgcccctgctttttcagggtaataa 792 Query: 560 ggggtagagaaaatg 574 ||||||||||||||| Sbjct: 793 ggggtagagaaaatg 807
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 809 bits (408), Expect = 0.0 Identities = 537/575 (93%), Gaps = 5/575 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggatcaccagcta 63 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 5461 gtgagacgatgggggataagcttcatctgtcgagagggaaacagcccagatcaccagcta 5520 Query: 64 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 123 |||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 5521 aggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggt 5580 Query: 124 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 183 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 5581 ttgcctagaagcagccacccttcaaagagtgcgtaatagctcactgatcgagcgctcttg 5640 Query: 184 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 5641 cgccgaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcgg 5700 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 |||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||||| Sbjct: 5701 taggggagcgttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaa 5760 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5761 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccta 5820 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 5821 aggattcctccgcaaggttcgtccacggagggtaagtcaggacctaagatcaggccgaaa 5880 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 ||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||| Sbjct: 5881 ggcgtagtcgatggacaacaggttaatattcctgtactgccccttgttggtcccgaggga 5940 Query: 484 cggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga--ccct 541 ||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||| |||| Sbjct: 5941 cggaggaggctaggttagccgaaagatggttatcggttcaagaacataaggtgactccct 6000 Query: 542 g-ctttttcagggtaag-aaggggtagagaaaatg 574 | |||||||||||||| ||||||||||||||||| Sbjct: 6001 gtttttttcagggtaagtaaggggtagagaaaatg 6035
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 809 bits (408), Expect = 0.0 Identities = 537/575 (93%), Gaps = 5/575 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggatcaccagcta 63 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 5461 gtgagacgatgggggataagcttcatctgtcgagagggaaacagcccagatcaccagcta 5520 Query: 64 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 123 |||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 5521 aggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggt 5580 Query: 124 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 183 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 5581 ttgcctagaagcagccacccttcaaagagtgcgtaatagctcactgatcgagcgctcttg 5640 Query: 184 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| Sbjct: 5641 cgccgaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcgg 5700 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 |||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||||| Sbjct: 5701 taggggagcgttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaa 5760 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5761 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccta 5820 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 5821 aggattcctccgcaaggttcgtccacggagggtaagtcaggacctaagatcaggccgaaa 5880 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 ||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||| Sbjct: 5881 ggcgtagtcgatggacaacaggttaatattcctgtactgccccttgttggtcccgaggga 5940 Query: 484 cggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga--ccct 541 ||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||| |||| Sbjct: 5941 cggaggaggctaggttagccgaaagatggttatcggttcaagaacataaggtgactccct 6000 Query: 542 g-ctttttcagggtaag-aaggggtagagaaaatg 574 | |||||||||||||| ||||||||||||||||| Sbjct: 6001 gtttttttcagggtaagtaaggggtagagaaaatg 6035
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 807 bits (407), Expect = 0.0 Identities = 500/531 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 974 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1033 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 1034 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 1093 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1094 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1153 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1154 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 1213 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 1214 aggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaag 1273 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1274 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1333 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1393 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 1394 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 1453 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 | |||||||||||||||||||||||||||||| |||| || ||| |||||| Sbjct: 1454 gaaggaggctaggttagccgaaagatggttatcggttcaaagacgcaaggt 1504
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 801 bits (404), Expect = 0.0 Identities = 407/408 (99%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 831 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 832 ggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagccaggaggtt 891 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 951 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 1011 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 1071 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 1131 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 412 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1132 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 1179
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 799 bits (403), Expect = 0.0 Identities = 499/531 (93%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 117175 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 117116 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||| Sbjct: 117115 ggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 117056 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 117055 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 116996 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 116995 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 116936 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 116935 aggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaag 116876 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 116875 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 116816 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116815 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 116756 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 116755 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 116696 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 | |||||||||||||||||||||||||||||| |||| || ||| |||||| Sbjct: 116695 gaaggaggctaggttagccgaaagatggttatcggttcaaagacgcaaggt 116645 Score = 799 bits (403), Expect = 0.0 Identities = 499/531 (93%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 90927 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 90986 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||| Sbjct: 90987 ggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 91046 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 91047 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 91106 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 91107 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 91166 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 91167 aggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaag 91226 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 91227 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 91286 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91287 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 91346 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 91347 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 91406 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 | |||||||||||||||||||||||||||||| |||| || ||| |||||| Sbjct: 91407 gaaggaggctaggttagccgaaagatggttatcggttcaaagacgcaaggt 91457
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 13 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 73 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 133 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 193 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 253 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 313 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 373 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 412 |||||||||||||||||||||||||||||||||||||||| Sbjct: 63529 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 785 bits (396), Expect = 0.0 Identities = 499/532 (93%), Gaps = 1/532 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 974 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 1033 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 1034 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 1093 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1094 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1153 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1154 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 1213 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| |||||||| | ||| ||| || || ||||||||||||| Sbjct: 1214 aggggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaag 1273 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1274 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1333 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1393 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtacta-ccccttgttggtacggaggga 483 |||||||||||||||||||||| ||||||||||||| | |||||||||||| | |||||| Sbjct: 1394 gcgtagtcgatggacaacaggtgaatattcctgtaccacccccttgttggtcccgaggga 1453 Query: 484 cggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||||||||||||||||||||| |||||||||| |||| |||||| |||||| Sbjct: 1454 cggaggaggctaggttagccgagagatggttatcggttcaaggacgcaaggt 1505 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 550 agggtaagaaggggtagagaaaat 573 |||||||| ||||||||||||||| Sbjct: 1526 agggtaaggaggggtagagaaaat 1549
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 769 bits (388), Expect = 0.0 Identities = 468/492 (95%), Gaps = 2/492 (0%) Strand = Plus / Plus Query: 83 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 142 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 143 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 202 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 203 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 262 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 263 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 322 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 323 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggtt 382 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggtt 298 Query: 383 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 358 Query: 443 aggtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggttagc 502 ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 359 aggcgaatattcctgtactaccccttgttggtcccgagggacggaggaggctaggttagc 418 Query: 503 cgaaagatggttataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggg 562 |||||||||||||| |||| |||||| || |||| ||||| ||||||||||||||||||| Sbjct: 419 cgaaagatggttatcggttcaaggacgcacggtgtccctgttttttcagggtaagaaggg 478 Query: 563 gtagagaaaatg 574 |||||||||||| Sbjct: 479 gtagagaaaatg 490
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 767 bits (387), Expect = 0.0 Identities = 495/531 (93%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 4867 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 4926 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 4927 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 4986 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 4987 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 5046 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 5047 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 5106 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 5107 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 5166 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5167 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5226 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5227 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 5286 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 5287 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 5346 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||| ||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 5347 ggagaaggttaggttagccgaaagatggttatcggtttaaggacgcaaggt 5397
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 767 bits (387), Expect = 0.0 Identities = 495/531 (93%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 977 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1036 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 1037 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 1096 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1097 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1156 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 1157 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 1216 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 1217 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 1276 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1277 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1336 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1396 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 1397 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 1456 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||| ||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1457 ggagaaggttaggttagccgaaagatggttatcggtttaaggacgcaaggt 1507
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 767 bits (387), Expect = 0.0 Identities = 495/531 (93%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 150268 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 150209 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 150208 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 150149 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 150148 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 150089 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 150088 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 150029 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 150028 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 149969 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 149968 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 149909 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149908 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 149849 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 149848 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 149789 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||| ||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 149788 ggagaaggttaggttagccgaaagatggttatcggtttaaggacgcaaggt 149738 Score = 767 bits (387), Expect = 0.0 Identities = 495/531 (93%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 118398 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 118457 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 118458 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 118517 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 118518 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 118577 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 118578 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 118637 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 118638 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 118697 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 118698 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 118757 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118758 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118817 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 118818 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 118877 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||| ||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 118878 ggagaaggttaggttagccgaaagatggttatcggtttaaggacgcaaggt 118928
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 767 bits (387), Expect = 0.0 Identities = 495/531 (93%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 977 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1036 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 1037 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 1096 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1097 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1156 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 1157 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 1216 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 1217 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 1276 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1277 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1336 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1396 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 1397 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 1456 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||| ||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1457 ggagaaggttaggttagccgaaagatggttatcggtttaaggacgcaaggt 1507
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 755 bits (381), Expect = 0.0 Identities = 529/575 (92%), Gaps = 5/575 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51715 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 51656 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggt 123 ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 51655 ggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggt 51596 Query: 124 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 183 |||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| Sbjct: 51595 ttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttg 51536 Query: 184 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 ||| ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| Sbjct: 51535 cgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcgg 51476 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 ||||||||||||||||||||||||||||| | || ||| | ||| |||||||||||| Sbjct: 51475 taggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaa 51416 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 51415 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 51356 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51355 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 51296 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 ||||||||| ||||||||||||| |||||||||||||||||||| | |||| | |||||| Sbjct: 51295 ggcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggtcccgaggga 51236 Query: 484 cggaggaggctaggttagcc--gaaagatggttataggtttaaggacacaaggtgaccct 541 ||||| |||||||||||||| ||||||||||||| |||| ||| || || ||| |||| Sbjct: 51235 cggagcaggctaggttagccgagaaagatggttatcggttcaagaacgtaaagtgcccct 51176 Query: 542 gctttttcagggtaag--aaggggtagagaaaatg 574 | |||||||||||||| ||||||||||||||||| Sbjct: 51175 gttttttcagggtaagttaaggggtagagaaaatg 51141 Score = 755 bits (381), Expect = 0.0 Identities = 529/575 (92%), Gaps = 5/575 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38113 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 38172 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggt 123 ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 38173 ggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggt 38232 Query: 124 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 183 |||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| Sbjct: 38233 ttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttg 38292 Query: 184 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 ||| ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| Sbjct: 38293 cgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcgg 38352 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 ||||||||||||||||||||||||||||| | || ||| | ||| |||||||||||| Sbjct: 38353 taggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaa 38412 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 38413 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 38472 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38473 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 38532 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 ||||||||| ||||||||||||| |||||||||||||||||||| | |||| | |||||| Sbjct: 38533 ggcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggtcccgaggga 38592 Query: 484 cggaggaggctaggttagcc--gaaagatggttataggtttaaggacacaaggtgaccct 541 ||||| |||||||||||||| ||||||||||||| |||| ||| || || ||| |||| Sbjct: 38593 cggagcaggctaggttagccgagaaagatggttatcggttcaagaacgtaaagtgcccct 38652 Query: 542 gctttttcagggtaag--aaggggtagagaaaatg 574 | |||||||||||||| ||||||||||||||||| Sbjct: 38653 gttttttcagggtaagttaaggggtagagaaaatg 38687
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 755 bits (381), Expect = 0.0 Identities = 529/575 (92%), Gaps = 5/575 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5041 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 5100 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggt 123 ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 5101 ggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggt 5160 Query: 124 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 183 |||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| Sbjct: 5161 ttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttg 5220 Query: 184 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 ||| ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| Sbjct: 5221 cgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcgg 5280 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 ||||||||||||||||||||||||||||| | || ||| | ||| |||||||||||| Sbjct: 5281 taggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaa 5340 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 5341 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 5400 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5401 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 5460 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 ||||||||| ||||||||||||| |||||||||||||||||||| | |||| | |||||| Sbjct: 5461 ggcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggtcccgaggga 5520 Query: 484 cggaggaggctaggttagcc--gaaagatggttataggtttaaggacacaaggtgaccct 541 ||||| |||||||||||||| ||||||||||||| |||| ||| || || ||| |||| Sbjct: 5521 cggagcaggctaggttagccgagaaagatggttatcggttcaagaacgtaaagtgcccct 5580 Query: 542 gctttttcagggtaag--aaggggtagagaaaatg 574 | |||||||||||||| ||||||||||||||||| Sbjct: 5581 gttttttcagggtaagttaaggggtagagaaaatg 5615
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 751 bits (379), Expect = 0.0 Identities = 493/531 (92%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 958 gtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagctaa 1017 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| |||| | |||||||| ||||||||||||||||||||||||| Sbjct: 1018 ggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggaggtt 1077 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1078 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1137 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1138 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 1197 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| | ||| ||| || || ||||||||||||| Sbjct: 1198 aggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcggaag 1257 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1258 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1317 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1318 gggttcctctgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccaaaag 1377 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 1378 gcgtagtcgatggacaacaggcgaatattcctgtactaccccttgttggtcccgagggac 1437 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||||||||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 1438 ggaggaggctaggttagccgaaagatggttatcggttcaaggactcaaggt 1488
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 749 bits (378), Expect = 0.0 Identities = 532/576 (92%), Gaps = 13/576 (2%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 490 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 491 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcga-gacagccaggaggtt 549 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 550 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 609 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 610 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 669 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 670 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 729 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||| | ||||| | ||||||||||||||||||||||||||||||||| || Sbjct: 730 cgagaatgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaa 785 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa----ga--tcaggc 418 || ||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 786 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaacgtgacgtca-gc 844 Query: 419 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacgg 478 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | | Sbjct: 845 cgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccg 904 Query: 479 agggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgac 538 |||||||||||||||||||||||||||||||||||||| |||| ||| || |||||| | Sbjct: 905 agggacggaggaggctaggttagccgaaagatggttatcggttcaagaacgtaaggtgtc 964 Query: 539 cctgctttttcagggtaagaaggggtagagaaaatg 574 ||||| ||| |||||||||||||||||||||||||| Sbjct: 965 cctgc-tttgcagggtaagaaggggtagagaaaatg 999
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 739 bits (373), Expect = 0.0 Identities = 495/533 (92%), Gaps = 2/533 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 115237 gtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 115178 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 115177 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 115118 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 115117 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 115058 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 115057 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 114998 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| | ||||| | | || ||| || || ||||||||||||| Sbjct: 114997 aggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaag 114939 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 114938 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 114879 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114878 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 114819 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 114818 gcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggtcccgagggac 114759 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga 537 ||||||||||||||||||||||||||||||| |||| ||||| |||||||| Sbjct: 114758 -gaggaggctaggttagccgaaagatggttatcggttcaaggatgcaaggtga 114707 Score = 739 bits (373), Expect = 0.0 Identities = 495/533 (92%), Gaps = 2/533 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 86883 gtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 86942 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 86943 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 87002 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 87003 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 87062 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 87063 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 87122 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| | ||||| | | || ||| || || ||||||||||||| Sbjct: 87123 aggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaag 87181 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 87182 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 87241 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87242 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 87301 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 87302 gcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggtcccgagggac 87361 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga 537 ||||||||||||||||||||||||||||||| |||| ||||| |||||||| Sbjct: 87362 -gaggaggctaggttagccgaaagatggttatcggttcaaggatgcaaggtga 87413
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 737 bits (372), Expect = 0.0 Identities = 526/575 (91%), Gaps = 8/575 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 970 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 1029 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1030 ggcccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1089 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||| Sbjct: 1090 tgcctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgc 1149 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg------c 238 || |||||| ||||||||||||||||| |||||||||||||||||| ||||| | Sbjct: 1150 gccgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatac 1209 Query: 239 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 298 |||||||||||||||||||||||||||||||||| | || ||| | ||| |||||| Sbjct: 1210 atcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaaa 1269 Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1270 cggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1329 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1330 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 1389 Query: 419 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacgg 478 ||||| | ||||||||||| |||||||| |||||| |||||||||||||||||||| | | Sbjct: 1390 cgaaacg-gtagtcgatgggcaacaggtgaatatttctgtactaccccttgttggtcccg 1448 Query: 479 agggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgac 538 |||||||||| |||||||||||||| |||||||||||| |||| ||| || |||||| | Sbjct: 1449 agggacggagcaggctaggttagccaaaagatggttatcggttcaagaacgtaaggtgtc 1508 Query: 539 cctgctttttcagggtaagaaggggtagagaaaat 573 |||| |||||||||||||||||||||||||||||| Sbjct: 1509 cctg-tttttcagggtaagaaggggtagagaaaat 1542
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 735 bits (371), Expect = 0.0 Identities = 524/575 (91%), Gaps = 5/575 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 145580 gtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 145521 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||| Sbjct: 145520 ggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtt 145461 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 145460 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 145401 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 145400 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 145341 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||| ||||||||| Sbjct: 145340 aggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaag 145281 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 145280 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 145221 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 145220 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaag 145161 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 145160 gcgtagttgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 145101 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga-----cc 539 ||||||||||| ||||||||| |||||||||| |||| |||||| |||||| | || Sbjct: 145100 ggaggaggctaagttagccgagagatggttatcggttcaaggacgcaaggttagtaaacc 145041 Query: 540 ctgctttttcagggtaagaaggggtagagaaaatg 574 | ||||| | ||||||||||||||||||||||| Sbjct: 145040 tttttttttaaaggtaagaaggggtagagaaaatg 145006 Score = 735 bits (371), Expect = 0.0 Identities = 524/575 (91%), Gaps = 5/575 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 112882 gtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 112941 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||| Sbjct: 112942 ggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtt 113001 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 113002 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 113061 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 113062 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 113121 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | ||| ||| || || ||| ||||||||| Sbjct: 113122 aggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaag 113181 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 113182 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 113241 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 113242 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaag 113301 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 113302 gcgtagttgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 113361 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga-----cc 539 ||||||||||| ||||||||| |||||||||| |||| |||||| |||||| | || Sbjct: 113362 ggaggaggctaagttagccgagagatggttatcggttcaaggacgcaaggttagtaaacc 113421 Query: 540 ctgctttttcagggtaagaaggggtagagaaaatg 574 | ||||| | ||||||||||||||||||||||| Sbjct: 113422 tttttttttaaaggtaagaaggggtagagaaaatg 113456
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 728 bits (367), Expect = 0.0 Identities = 484/523 (92%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| |||||||||| |||||||| ||||||| ||||| Sbjct: 978 gtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaa 1037 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||| Sbjct: 1038 ggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 1097 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1098 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1157 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1158 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 1217 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||| | |||||| | ||| ||| || || ||||||||||||| Sbjct: 1218 aggggagcgttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcggaag 1277 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1278 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1337 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1338 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1397 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||||||||||||||||| |||||||||||||||||||||| |||| | ||||||| Sbjct: 1398 gcgtagtcgatggacaacaggcgaatattcctgtactaccccttgctggtcccgagggac 1457 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaagga 527 |||| ||||||||||||||||||||||||||| |||| ||||| Sbjct: 1458 ggagtaggctaggttagccgaaagatggttatcggttcaagga 1500
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 714 bits (360), Expect = 0.0 Identities = 483/524 (92%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 144902 gtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 144961 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 144962 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 145021 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 145022 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 145081 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || |||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 145082 gccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 145141 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||| ||| ||||||| | | | ||| || || ||||||||||||| Sbjct: 145142 aggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaag 145201 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 145202 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaa 145261 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 145262 gggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagag 145321 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||| |||||||||| ||| |||||||| ||||| |||||||||||| | ||||||| Sbjct: 145322 gcgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgagggac 145381 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggac 528 |||||||||||||||||||||||| ||||||| |||| |||||| Sbjct: 145382 ggaggaggctaggttagccgaaaggtggttatcggttcaaggac 145425 Score = 714 bits (360), Expect = 0.0 Identities = 483/524 (92%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 87949 gtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 87890 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 87889 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 87830 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 87829 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 87770 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || |||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 87769 gccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 87710 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||| ||| ||||||| | | | ||| || || ||||||||||||| Sbjct: 87709 aggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaag 87650 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 87649 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaa 87590 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 87589 gggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagag 87530 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||||||| |||||||||| ||| |||||||| ||||| |||||||||||| | ||||||| Sbjct: 87529 gcgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgagggac 87470 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggac 528 |||||||||||||||||||||||| ||||||| |||| |||||| Sbjct: 87469 ggaggaggctaggttagccgaaaggtggttatcggttcaaggac 87426
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 712 bits (359), Expect = 0.0 Identities = 488/531 (91%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 127468 gtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 127409 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 127408 ggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 127349 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| | Sbjct: 127348 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttac 127289 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||| | ||||||||||||||| ||||||||| ||||||| Sbjct: 127288 gccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggt 127229 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||| | ||| |||||| ||| ||| || || ||||||||||||| Sbjct: 127228 aggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaag 127169 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 127168 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 127109 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127108 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 127049 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||| Sbjct: 127048 gcgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgagggac 126989 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||||||||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 126988 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggt 126938 Score = 712 bits (359), Expect = 0.0 Identities = 488/531 (91%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 95979 gtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 96038 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 96039 ggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 96098 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| | Sbjct: 96099 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttac 96158 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||| | ||||||||||||||| ||||||||| ||||||| Sbjct: 96159 gccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggt 96218 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||| | ||| |||||| ||| ||| || || ||||||||||||| Sbjct: 96219 aggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaag 96278 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 96279 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 96338 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96339 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96398 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 |||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||| Sbjct: 96399 gcgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgagggac 96458 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 |||||||||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 96459 ggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggt 96509
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 700 bits (353), Expect = 0.0 Identities = 353/353 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526609 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 33526668 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526669 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 33526728 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526729 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 33526788 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526789 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 33526848 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526849 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 33526908 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 357 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526909 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 22 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 81 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 82 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 141 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 142 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 202 ctaagcgatctgccgaagctgtgggatgtcaaaat 236 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 362 caaggtttcctccgcaaggttcgtcca 388 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 169 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 210 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 238 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 297 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 298 gcggaagcgagaatgtcggcttgagtaac 326 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 318 ttgagtaacgaaaacattggtgagaatc 345 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gatcaggccgaaaggcgtag 430 |||||||||||||||||||| Sbjct: 41814858 gatcaggccgaaaggcgtag 41814877
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 700 bits (353), Expect = 0.0 Identities = 353/353 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71806 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 71865 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71866 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 71925 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71926 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 71985 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71986 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 72045 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72046 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 72105 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 357 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72106 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 318 ttgagtaacgaaaacattggtgagaatc 345 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 698 bits (352), Expect = 0.0 Identities = 403/420 (95%) Strand = Plus / Plus Query: 155 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 214 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 215 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 274 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 275 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 334 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 335 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagg 394 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagg 994 Query: 395 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattc 454 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 995 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattc 1054 Query: 455 ctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagatggtt 514 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 1055 ctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagatggtt 1114 Query: 515 ataggtttaaggacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaatg 574 || |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1115 atcggttcaaggacgcaaggtgcccctgctttttcagggtaagaaggggtagagaaaatg 1174
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 668 bits (337), Expect = 0.0 Identities = 520/577 (90%), Gaps = 8/577 (1%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||| |||||||||||||||||| |||||| |||||||| ||| ||||| ||| Sbjct: 5593 gtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagattaccagataa 5534 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 5533 ggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagccaggaggtt 5474 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct: 5473 tgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgc 5414 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 | ||||||||||||| ||||||||||||||||||||||||||| || ||| ||||||| Sbjct: 5413 accgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaaaacatcggt 5354 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||| | |||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 5353 aggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacgaagcggaag 5294 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5293 tgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5234 Query: 365 ggtttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagatcaggccgaaa 423 || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 5233 gggttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagatcaggccgaaa 5174 Query: 424 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 483 | || ||||||||||||||||| ||||||||||||||| || |||||||| | |||||| Sbjct: 5173 cg-gttgtcgatggacaacaggtgaatattcctgtactatcctttgttggtcccgaggga 5115 Query: 484 cggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgc 543 |||||||||||||||||||||||| |||||||| |||| |||||| |||||||||| ||| Sbjct: 5114 cggaggaggctaggttagccgaaaaatggttatcggttcaaggacgcaaggtgaccttgc 5055 Query: 544 --tttttc----agggtaagaaggggtagagaaaatg 574 |||||| ||||| ||||||||||||||||||| Sbjct: 5054 cttttttcagggagggtcagaaggggtagagaaaatg 5018
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 664 bits (335), Expect = 0.0 Identities = 335/335 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 834 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 894 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 954 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 1014 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 1074 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtg 339 ||||||||||||||||||||||||||||||||||| Sbjct: 1075 cgagaatgtcggcttgagtaacgaaaacattggtg 1109
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 638 bits (322), Expect = e-180 Identities = 385/406 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1026 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1027 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtt 1086 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1087 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1146 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 1147 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgt 1206 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||| Sbjct: 1207 aggggagcgttccgccttaaagggaagcaaccgcgccagcaagggtggacgaagcggaag 1266 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||| |||||| |||||||||||| ||||||||||||||||| |||||||| |||| | || Sbjct: 1267 cgaaaatgtccgcttgagtaacgcaaacattggtgagaatctaatgcccccaaaaactaa 1326 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 410 || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1327 gggttcctccgcaaggttcgtccacggagggtgagtcaaggcctaa 1372 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 538 ccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||| ||||||||||||||||||||||||||||||| Sbjct: 1521 ccctggtttttcagggtaagaaggggtagagaaaatg 1557
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 630 bits (318), Expect = e-177 Identities = 475/525 (90%), Gaps = 3/525 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| |||||| |||||||| || |||||||||| Sbjct: 957 gtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaa 1016 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 1017 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggtt 1076 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1077 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1136 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcg 242 || ||||||||||||| ||||||| |||||||||||||||||||||| |||| ||||| Sbjct: 1137 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagacatcg 1196 Query: 243 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 302 |||||||||||||| || ||| | |||||| |||||||| | || ||||||||||| Sbjct: 1197 gtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcgga 1256 Query: 303 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 362 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1257 agtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacct 1316 Query: 363 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 422 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1317 aagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaa 1376 Query: 423 aggcgtagtcgatggacaacaggtcaatattcctgtactac-cccttgttggtacggagg 481 ||||| |||||||||||||||||| ||||||||||||| || |||||||| | |||| Sbjct: 1377 aggcgcagtcgatggacaacaggttaatattcctgtaccacttatttgttggtcccgagg 1436 Query: 482 gacggaggaggctaggttagccgaaagatggttataggtttaagg 526 ||||||| |||||| |||||||||| ||||||||| |||| |||| Sbjct: 1437 gacggagaaggctaagttagccgaaggatggttatcggttcaagg 1481
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 617 bits (311), Expect = e-173 Identities = 477/528 (90%), Gaps = 7/528 (1%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 138293 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 138234 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||||| Sbjct: 138233 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtt 138174 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | ||| Sbjct: 138173 tgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgc 138114 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcg 242 || || |||||||||| ||||||| |||||||||||||||||||||| || || ||||| Sbjct: 138113 gccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcg 138054 Query: 243 gtaggggagcgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagc 299 ||||||||||||||||||| |||| |||||| | ||| ||| || | |||||||| Sbjct: 138053 gtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagc 137994 Query: 300 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 359 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 137993 ggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 137934 Query: 360 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 419 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137933 cccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 137874 Query: 420 gaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt-acgg 478 || ||||||||||||||||||||||| |||||||||||||||||| | |||||| |||| Sbjct: 137873 gagaggcgtagtcgatggacaacaggcgaatattcctgtactacccatcgttggtcacgg 137814 Query: 479 agggacggaggaggctaggttagccgaaagatggttataggtttaagg 526 |||||||||||||| ||||||||||| |||||||||| |||| |||| Sbjct: 137813 -gggacggaggaggccaggttagccgagagatggttatcggttcaagg 137767 Score = 617 bits (311), Expect = e-173 Identities = 477/528 (90%), Gaps = 7/528 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 83584 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 83643 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||||| Sbjct: 83644 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtt 83703 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | ||| Sbjct: 83704 tgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgc 83763 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcg 242 || || |||||||||| ||||||| |||||||||||||||||||||| || || ||||| Sbjct: 83764 gccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcg 83823 Query: 243 gtaggggagcgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagc 299 ||||||||||||||||||| |||| |||||| | ||| ||| || | |||||||| Sbjct: 83824 gtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagc 83883 Query: 300 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 359 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 83884 ggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 83943 Query: 360 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 419 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83944 cccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 84003 Query: 420 gaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt-acgg 478 || ||||||||||||||||||||||| |||||||||||||||||| | |||||| |||| Sbjct: 84004 gagaggcgtagtcgatggacaacaggcgaatattcctgtactacccatcgttggtcacgg 84063 Query: 479 agggacggaggaggctaggttagccgaaagatggttataggtttaagg 526 |||||||||||||| ||||||||||| |||||||||| |||| |||| Sbjct: 84064 -gggacggaggaggccaggttagccgagagatggttatcggttcaagg 84110
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 615 bits (310), Expect = e-173 Identities = 473/525 (90%), Gaps = 3/525 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| |||||| |||||||| || |||||||||| Sbjct: 124308 gtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaa 124249 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 124248 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggtt 124189 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 124188 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 124129 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gcatcg 242 || ||||||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 124128 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcg 124069 Query: 243 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 302 |||||||||||||| || ||| | |||||| |||||||| | || ||||||||||| Sbjct: 124068 gtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcgga 124009 Query: 303 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 362 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 124008 agtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacct 123949 Query: 363 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 422 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123948 aagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaa 123889 Query: 423 aggcgtagtcgatggacaacaggtcaatattcctgtactac-cccttgttggtacggagg 481 ||||| |||||||||||||||||| ||||||||||||| || |||||||| | |||| Sbjct: 123888 aggcgcagtcgatggacaacaggtgaatattcctgtaccacttatttgttggtcccgagg 123829 Query: 482 gacggaggaggctaggttagccgaaagatggttataggtttaagg 526 ||||||| |||||| |||||||||| ||||||||| |||| |||| Sbjct: 123828 gacggagaaggctaagttagccgaaggatggttatcggttcaagg 123784 Score = 615 bits (310), Expect = e-173 Identities = 473/525 (90%), Gaps = 3/525 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| |||||| |||||||| || |||||||||| Sbjct: 95558 gtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaa 95617 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 95618 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggtt 95677 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 95678 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 95737 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gcatcg 242 || ||||||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 95738 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcg 95797 Query: 243 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 302 |||||||||||||| || ||| | |||||| |||||||| | || ||||||||||| Sbjct: 95798 gtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcgga 95857 Query: 303 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 362 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95858 agtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacct 95917 Query: 363 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 422 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95918 aagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaa 95977 Query: 423 aggcgtagtcgatggacaacaggtcaatattcctgtactac-cccttgttggtacggagg 481 ||||| |||||||||||||||||| ||||||||||||| || |||||||| | |||| Sbjct: 95978 aggcgcagtcgatggacaacaggtgaatattcctgtaccacttatttgttggtcccgagg 96037 Query: 482 gacggaggaggctaggttagccgaaagatggttataggtttaagg 526 ||||||| |||||| |||||||||| ||||||||| |||| |||| Sbjct: 96038 gacggagaaggctaagttagccgaaggatggttatcggttcaagg 96082
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 613 bits (309), Expect = e-172 Identities = 477/533 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||||||| Sbjct: 5006 gtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaa 5065 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| ||||| Sbjct: 5066 ggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggtt 5125 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 5126 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgc 5185 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 5186 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggt 5245 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||| ||| | |||||| | | | || | || || ||||||||||||| Sbjct: 5246 aggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaag 5305 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5306 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5365 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5366 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaag 5425 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 5426 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 5485 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga 537 |||| ||||||| |||||||||| ||||| || |||| ||||| |||||||| Sbjct: 5486 ggagaaggctagattagccgaaaaatggtgatcggttcaaggatgcaaggtga 5538
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 613 bits (309), Expect = e-172 Identities = 477/533 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||||||| Sbjct: 973 gtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaa 1032 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| ||||| Sbjct: 1033 ggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggtt 1092 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1093 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgc 1152 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 1153 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggt 1212 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||| ||| | |||||| | | | || | || || ||||||||||||| Sbjct: 1213 aggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaag 1272 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1273 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1332 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1333 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaag 1392 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 1393 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 1452 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga 537 |||| ||||||| |||||||||| ||||| || |||| ||||| |||||||| Sbjct: 1453 ggagaaggctagattagccgaaaaatggtgatcggttcaaggatgcaaggtga 1505
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 613 bits (309), Expect = e-172 Identities = 477/533 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||||||| Sbjct: 973 gtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaa 1032 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| ||||| Sbjct: 1033 ggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggtt 1092 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1093 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgc 1152 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 1153 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggt 1212 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||| ||| | |||||| | | | || | || || ||||||||||||| Sbjct: 1213 aggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaag 1272 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1273 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1332 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1333 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaag 1392 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 1393 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 1452 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga 537 |||| ||||||| |||||||||| ||||| || |||| ||||| ||||||||| Sbjct: 1453 ggagaaggctagattagccgaaaaatggtgatcggttcaaggatacaaggtga 1505
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 605 bits (305), Expect = e-170 Identities = 455/503 (90%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||| Sbjct: 1075 agacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaaggc 1134 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1135 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1194 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1195 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1254 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggta 245 ||||||||||||| ||||||| |||||||||||||||||||||| | | ||||||||| Sbjct: 1255 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggta 1314 Query: 246 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 305 |||||||||||||| | | |||||| | | | || | || || ||||||||||||| Sbjct: 1315 ggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagt 1374 Query: 306 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 365 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1375 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1434 Query: 366 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 425 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1435 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1494 Query: 426 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta--cggaggga 483 || ||||||||||||||||||||| |||||||||||||||||||| || | |||||| Sbjct: 1495 cgcagtcgatggacaacaggtcaagattcctgtactaccccttgtcggcaataagaggga 1554 Query: 484 cggaggaggctaggttagccgaa 506 |||||||||||| | |||||||| Sbjct: 1555 cggaggaggctaagctagccgaa 1577
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 597 bits (301), Expect = e-167 Identities = 454/503 (90%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 958 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggc 1017 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1018 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1077 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1078 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1137 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggta 245 ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 1138 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1197 Query: 246 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 305 |||||||||||||| || | |||||| | | | || | || || ||||||||||||| Sbjct: 1198 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1257 Query: 306 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 365 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1258 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1317 Query: 366 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 425 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1318 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1377 Query: 426 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta--cggaggga 483 || ||||||||||||||||||||| ||||||||||||| |||| | || | |||||| Sbjct: 1378 cgcagtcgatggacaacaggtcaagattcctgtactactccttatcggcaataagaggga 1437 Query: 484 cggaggaggctaggttagccgaa 506 |||||||||||| | |||||||| Sbjct: 1438 cggaggaggctaagctagccgaa 1460
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 597 bits (301), Expect = e-167 Identities = 475/533 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| | |||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 968 gtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagctaa 1027 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||||||||| Sbjct: 1028 ggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggtt 1087 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || || Sbjct: 1088 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcgc 1147 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||| ||| ||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1148 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcggt 1207 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||| ||| | |||||| | | | || | | || ||||||||||||| Sbjct: 1208 aggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaag 1267 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1268 cgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaacctaa 1327 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 1328 gggttcctccgcaaggttcgtccacggagggttagtcagggcctaagattaggccgaaag 1387 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 1388 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 1447 Query: 485 ggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggtga 537 |||| ||||||| || ||||||| ||||| || |||| ||||| ||||||||| Sbjct: 1448 ggagaaggctagattggccgaaaaatggtgatcggttcaaggatacaaggtga 1500
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 597 bits (301), Expect = e-167 Identities = 454/503 (90%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 971 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggc 1030 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1031 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1090 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1091 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1150 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggta 245 ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 1151 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1210 Query: 246 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 305 |||||||||||||| || | |||||| | | | || | || || ||||||||||||| Sbjct: 1211 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1270 Query: 306 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 365 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1330 Query: 366 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 425 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1331 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1390 Query: 426 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta--cggaggga 483 || ||||||||||||||||||||| ||||||||||||| |||| | || | |||||| Sbjct: 1391 cgcagtcgatggacaacaggtcaagattcctgtactactccttatcggcaataagaggga 1450 Query: 484 cggaggaggctaggttagccgaa 506 |||||||||||| | |||||||| Sbjct: 1451 cggaggaggctaagctagccgaa 1473
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 541 bits (273), Expect = e-151 Identities = 382/412 (92%), Gaps = 6/412 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1049 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1050 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1109 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1110 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1169 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1170 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 1229 Query: 245 aggggagcgttccgccttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg- 301 ||||||||||||||||||| | |||| || | |||||| |||| | |||||| ||| Sbjct: 1230 aggggagcgttccgccttaaaaggaaacacccgcgcgaacaaggggttggacgaaacgga 1289 Query: 302 aagcgagaatgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaa 359 || | ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 1290 aaccaagaatgtcggcttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaa 1349 Query: 360 cccaaggtttcctccgc-aaggttcgtccacggagggtgagtcagggcctaa 410 || || | ||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 1350 cctaaaggttcctccccaaaggttcgtccacggagggtgagtcaaggcctaa 1401
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 537 bits (271), Expect = e-149 Identities = 277/279 (99%) Strand = Plus / Minus Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 475 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634428 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634369 Query: 476 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5634368 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacgcaaggt 5634309 Query: 536 gaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||||||||| Sbjct: 5634308 gaccctgctttttcagggtaagaaggggtagagaaaatg 5634270 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 526 gacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13417189 gacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaatg 13417141
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 537 bits (271), Expect = e-149 Identities = 277/279 (99%) Strand = Plus / Minus Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 475 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634417 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634358 Query: 476 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5634357 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacgcaaggt 5634298 Query: 536 gaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||||||||| Sbjct: 5634297 gaccctgctttttcagggtaagaaggggtagagaaaatg 5634259 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 526 gacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13371463 gacacaaggtgaccctgctttttcagggtaagaaggggtagagaaaatg 13371415
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 537 bits (271), Expect = e-149 Identities = 277/279 (99%) Strand = Plus / Plus Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 475 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18457 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 18516 Query: 476 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 18517 cggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacgcaaggt 18576 Query: 536 gaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||||||||||||||||||||||||||||||| Sbjct: 18577 gaccctgctttttcagggtaagaaggggtagagaaaatg 18615
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 535 bits (270), Expect = e-149 Identities = 415/463 (89%), Gaps = 4/463 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||||| Sbjct: 914 gtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagctaa 973 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 974 ggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggaggtt 1033 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1034 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1093 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgcat 240 || ||||||||| ||| ||||||| |||||||||||||||||||||| | || || Sbjct: 1094 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagatat 1153 Query: 241 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 300 ||||||||||||||||||||||||| |||||| ||| |||| | || ||||||||| Sbjct: 1154 cggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaagcg 1213 Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1214 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1273 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 |||||| ||||||||||||| ||||||||||||||||||||||| |||||| | || || Sbjct: 1274 ccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggtgagacca 1333 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtactac 463 || || | | | |||||||||||||| ||||||||||||||| Sbjct: 1334 aatggtgcaattgatggacaacaggtttatattcctgtactac 1376
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 531 bits (268), Expect = e-148 Identities = 439/496 (88%), Gaps = 10/496 (2%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| |||||||||||||||||||||| |||||| |||||||| ||||||||||||| Sbjct: 1005 gtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcaccagctaa 1064 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| Sbjct: 1065 ggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccaggaggtt 1124 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 1125 tgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgc 1184 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||||||| |||||||||||||||||| | ||||||| Sbjct: 1185 gccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----catcggt 1239 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| |||| Sbjct: 1240 aggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagcagaag 1299 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1300 tgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1359 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||| ||||||||||||||||| ||||||||||||| |||||||||| | ||||| Sbjct: 1360 gggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatcatactgaaag 1419 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 484 | |||| ||||||||| |||| ||||||||||||||||||| | ||| ||||||| Sbjct: 1420 gtttagttgatggacaataggttaatattcctgtactaccccct-----taccgagggac 1474 Query: 485 ggaggaggctaggtta 500 |||| ||||||||||| Sbjct: 1475 ggagtaggctaggtta 1490
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 527 bits (266), Expect = e-146 Identities = 266/266 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 653 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 713 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 773 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 833 Query: 245 aggggagcgttccgccttagagggaa 270 |||||||||||||||||||||||||| Sbjct: 834 aggggagcgttccgccttagagggaa 859
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 494 bits (249), Expect = e-136 Identities = 461/529 (87%), Gaps = 2/529 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 3992 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 4051 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 4052 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 4111 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 4112 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 4171 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 247 ||||||||||||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 4172 gaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 4231 Query: 248 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 307 ||||||||| || ||||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 4232 ggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagcagaagtga 4291 Query: 308 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 367 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 4292 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 4351 Query: 368 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 427 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4352 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 4411 Query: 428 tagtcgatggacaacaggtcaatattcctgtactaccccttgtt-ggtacggagggacgg 486 | |||||||| ||| ||||||||||||||||| | | || || |||| ||||||| Sbjct: 4412 caatcgatggataactggtcaatattcctgtaccattctttattaactacg-agggacga 4470 Query: 487 aggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 || |||||| |||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 4471 agaaggctaagttatccgaatgatggttatcggtttaaggatacaaggt 4519
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 484 bits (244), Expect = e-133 Identities = 408/462 (88%), Gaps = 3/462 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||| Sbjct: 919 gtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccagttaa 978 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||||| Sbjct: 979 ggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccaggaggtt 1038 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1039 tgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1098 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---gcatc 241 || ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| |||| Sbjct: 1099 gccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataacatc 1158 Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 |||||||||||||||||| |||| |||||| ||| ||||| || ||| |||||| Sbjct: 1159 ggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaagcgg 1218 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| Sbjct: 1219 aagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacc 1278 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 421 ||||| ||||| || ||||||||||| || |||||||||||| |||||| | | ||| | Sbjct: 1279 caaggattcctacggaaggttcgtccgcgtagggtgagtcagaacctaaggtaaagccaa 1338 Query: 422 aaggcgtagtcgatggacaacaggtcaatattcctgtactac 463 | ||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1339 acggcgtagtcgatggataacaggttaatattcctgtactac 1380
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 484 bits (244), Expect = e-133 Identities = 458/528 (86%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 958 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 1017 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 1018 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 1077 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1078 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 1137 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 247 ||||||||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaa-tacatcggtagg 1196 Query: 248 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 307 ||||||||| || ||||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 1197 ggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagcagaagtga 1256 Query: 308 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 367 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1257 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1316 Query: 368 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 427 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1317 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgacaggcg 1376 Query: 428 tagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacgga 487 | |||||||| ||| ||| ||||||||||||| | | || || | |||||||||| Sbjct: 1377 caatcgatggataacgggttaatattcctgtaccattctttattaactctgagggacgga 1436 Query: 488 ggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 | |||||| |||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 1437 gaaggctaagttatccgaatgatggttatcggtttaaggatacaaggt 1484
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 478 bits (241), Expect = e-131 Identities = 407/462 (88%), Gaps = 4/462 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 955 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 1014 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||||||| Sbjct: 1015 ggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggtt 1074 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1075 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgc 1134 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----cat 240 || ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| || Sbjct: 1135 gccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatat 1194 Query: 241 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 300 ||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||||| Sbjct: 1195 cggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcg 1254 Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1255 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 1314 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| ||||||||||||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 1315 ctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccg 1374 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1375 aaaggcgtattcgatggacaacaggttaatattcctgtacta 1416
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 478 bits (241), Expect = e-131 Identities = 407/462 (88%), Gaps = 4/462 (0%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 114707 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 114648 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||||||| Sbjct: 114647 ggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggtt 114588 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 114587 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgc 114528 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----cat 240 || ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| || Sbjct: 114527 gccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatat 114468 Query: 241 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 300 ||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||||| Sbjct: 114467 cggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcg 114408 Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 114407 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 114348 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| ||||||||||||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 114347 ctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccg 114288 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 114287 aaaggcgtattcgatggacaacaggttaatattcctgtacta 114246 Score = 478 bits (241), Expect = e-131 Identities = 407/462 (88%), Gaps = 4/462 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 87281 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 87340 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||||||| Sbjct: 87341 ggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggtt 87400 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 87401 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgc 87460 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----cat 240 || ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| || Sbjct: 87461 gccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatat 87520 Query: 241 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 300 ||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||||| Sbjct: 87521 cggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcg 87580 Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 87581 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 87640 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| ||||||||||||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 87641 ctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccg 87700 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 87701 aaaggcgtattcgatggacaacaggttaatattcctgtacta 87742
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 474 bits (239), Expect = e-130 Identities = 273/283 (96%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 471 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130414 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 130355 Query: 472 ggtacggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacaca 531 ||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||| || Sbjct: 130354 ggtcccgagggacggaggaggctaggttagccgaaagatggttatcggttcaaggacgca 130295 Query: 532 aggtgaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130294 aggtgaccctg-tttttcagggtaagaaggggtagagaaaatg 130253 Score = 474 bits (239), Expect = e-130 Identities = 273/283 (96%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 471 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103031 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 103090 Query: 472 ggtacggagggacggaggaggctaggttagccgaaagatggttataggtttaaggacaca 531 ||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||| || Sbjct: 103091 ggtcccgagggacggaggaggctaggttagccgaaagatggttatcggttcaaggacgca 103150 Query: 532 aggtgaccctgctttttcagggtaagaaggggtagagaaaatg 574 ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103151 aggtgaccctg-tttttcagggtaagaaggggtagagaaaatg 103192 Score = 432 bits (218), Expect = e-118 Identities = 245/254 (96%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130821 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 130762 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 130761 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 130702 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 130701 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 130642 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| Sbjct: 130641 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggt 130582 Query: 245 aggggagcgttccg 258 |||||||||||||| Sbjct: 130581 aggggagcgttccg 130568 Score = 432 bits (218), Expect = e-118 Identities = 245/254 (96%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102624 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 102683 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 102684 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 102743 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 102744 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 102803 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| Sbjct: 102804 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggt 102863 Query: 245 aggggagcgttccg 258 |||||||||||||| Sbjct: 102864 aggggagcgttccg 102877
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 470 bits (237), Expect = e-129 Identities = 458/529 (86%), Gaps = 2/529 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 958 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 1017 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 1018 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 1077 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1078 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 1137 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 247 ||||||||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 1197 Query: 248 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 307 ||||||||| || |||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 1198 ggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagcagaagtga 1257 Query: 308 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 367 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 1258 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 1317 Query: 368 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 427 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1318 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 1377 Query: 428 tagtcgatggacaacaggtcaatattcctgtactaccccttgtt-ggtacggagggacgg 486 | |||||||| ||| ||| ||||||||||||| | | || || |||| ||||||| Sbjct: 1378 caatcgatggataacgggttaatattcctgtaccattctttattaactacg-agggacga 1436 Query: 487 aggaggctaggttagccgaaagatggttataggtttaaggacacaaggt 535 || |||||| |||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 1437 agaaggctaagttatccgaatgatggttatcggtttaaggatacaaggt 1485
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 460 bits (232), Expect = e-126 Identities = 371/411 (90%), Gaps = 6/411 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 990 gtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaa 1049 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| Sbjct: 1050 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagccaagaggtt 1109 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||||| Sbjct: 1110 tgcctaaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgc 1169 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 1170 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgt 1229 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||| ||||| ||||||||| |||| ||| |||| |||||| | | | Sbjct: 1230 aggggagcgttcccccttatagggaagcacccgccccagcaagggtggacgaaaccg-at 1288 Query: 305 cgagaatgtcggcttgagtaacgaaaaca-ttggtgagaatccaatgccccgaaaaccca 363 | | |||||| ||||||||| ||||| ||||||||||||||||||||| |||||| | Sbjct: 1289 ctaaaatgtccccttgagtaaaccaaacatttggtgagaatccaatgcccccaaaaccta 1348 Query: 364 aggtttcctccgc-aaggttcgtccacgga--gggtgagtc-agggcctaa 410 ||| ||||||| | |||||||||||||||| ||||||||| ||||||||| Sbjct: 1349 agggttcctccccaaaggttcgtccacggatggggtgagtcaagggcctaa 1399
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 426 bits (215), Expect = e-116 Identities = 257/271 (94%) Strand = Plus / Plus Query: 6 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 65 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 985 tgagacgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaag 1044 Query: 66 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 125 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 1045 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgaggttt 1104 Query: 126 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 185 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1105 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1164 Query: 186 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 245 | || |||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 1165 cccaaaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggta 1224 Query: 246 ggggagcgttccgccttagagggaagcaacc 276 ||||||||||||||| || |||||| ||||| Sbjct: 1225 ggggagcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 329 aaacattggtgagaatccaatgccccgaaaa 359 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 424 bits (214), Expect = e-115 Identities = 253/266 (95%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 gtgagacaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1037 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||| Sbjct: 1038 ggcccctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagccacgaggtt 1097 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1098 tgcctataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1157 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 1158 gcccaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggt 1217 Query: 245 aggggagcgttccgccttagagggaa 270 ||||||||||||| |||||||||||| Sbjct: 1218 aggggagcgttcccccttagagggaa 1243 Score = 77.8 bits (39), Expect = 4e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 316 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 374 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 375 gc-aaggttcgtccacggagggt 396 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 424 bits (214), Expect = e-115 Identities = 361/406 (88%), Gaps = 3/406 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 989 gtgagaccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaa 1048 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| Sbjct: 1049 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaagaggtt 1108 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1109 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgc 1168 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || || ||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 1169 gcccaaaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgt 1228 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||| ||||| |||||| || || | | | |||| ||| || ||||| Sbjct: 1229 aggggagcgttcccccttaaagggaaacaccccccccaacatgggtggaccaaacggaaa 1288 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg-aaaaccca 363 | |||||||| || | ||||||| ||||||||||||||||| |||||||| |||| | | Sbjct: 1289 ccagaatgtccgccttagtaacgcaaacattggtgagaatctaatgccccccaaaaacta 1348 Query: 364 aggtttcctccgcaa-ggttcgtccacgga-gggtgagtcagggcc 407 | | ||||||| ||| ||||||||||| || |||||||||| |||| Sbjct: 1349 aaggttcctccccaaaggttcgtccaccgaggggtgagtcaaggcc 1394
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 422 bits (213), Expect = e-115 Identities = 255/269 (94%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 976 gtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaa 1035 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1036 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1095 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1096 tgcctaaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1155 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| Sbjct: 1156 gccgaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaaaacatcggt 1215 Query: 245 aggggagcgttccgccttagagggaagca 273 |||||||||||||| |||| |||||||| Sbjct: 1216 aggggagcgttccgtgttagggggaagca 1244
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 410 bits (207), Expect = e-111 Identities = 259/275 (94%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 951 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1010 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1011 ggcccctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggtt 1070 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1071 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1130 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||||||||||||||||||||||||||||||||||||||||||| |||| |||| || Sbjct: 1131 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatccgt 1190 Query: 245 a-ggggagcgttccgccttagagggaagcaaccgc 278 | ||| ||||||||| |||| |||||||| |||| Sbjct: 1191 atgggaagcgttccgtgttagggggaagcatccgc 1225
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 408 bits (206), Expect = e-111 Identities = 377/434 (86%), Gaps = 5/434 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 2508 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 2567 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||| | ||| |||||||||||||||||| |||| ||||| |||||||||| Sbjct: 2568 ggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggaggtt 2627 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 2628 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 2687 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| |||||| || ||||||||||||||||| ||| |||||| Sbjct: 2688 gccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatcggt 2742 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||| || ||||| |||||| ||| ||||||| || |||||||| |||| Sbjct: 2743 aggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcagaag 2802 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 2803 tgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 2862 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 ||||||||| | ||||||||||| |||||||||||||||| |||||| |||| |||| Sbjct: 2863 ggtttcctctggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaa 2922 Query: 425 gcgtagtcgatgga 438 |||||||||||||| Sbjct: 2923 gcgtagtcgatgga 2936
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 406 bits (205), Expect = e-110 Identities = 220/225 (97%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 507 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 508 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 567 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 568 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 627 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 229 || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 406 bits (205), Expect = e-110 Identities = 236/245 (96%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 177814 gtgagacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaa 177873 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 177874 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 177933 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 177934 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 177993 Query: 185 gctgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcgg 243 || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 177994 gccgaagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcgg 178053 Query: 244 taggg 248 |||| Sbjct: 178054 caggg 178058 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 485 ggaggaggctaggttagccgaaagatggttataggtt 521 |||||||||||||||||||||||||||||||| |||| Sbjct: 393068 ggaggaggctaggttagccgaaagatggttatcggtt 393104 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 110 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 169 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 110 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 169 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 aggcccctaaatgaccgctcag 85 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 gtcgagagggaaacagcccggatc 55 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 gtcgagagggaaacagcccggatc 55 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 402 bits (203), Expect = e-109 Identities = 317/355 (89%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||| | |||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 2851 gtgagacgacgagggataagcttcatcgtcgagagggaaacaacctggatcaccagctaa 2792 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2791 ggcccctaaatgactgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtt 2732 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||| |||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 2731 tgcctagaagcaaccacccttgaaaaagtgcgtaatagctcactaatcgagcgcacttgc 2672 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 | |||||||| ||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 2671 accaaagatgaattgggctaagcgatctgttgaagctatgggatgtcaaaatgcatcgat 2612 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 ||||||||||||||||||||||||||||| | || || | ||| || || ||||||| Sbjct: 2611 aggggagcgttccgccttagagggaagcacctgcacgagtagtggtggaagaggcggaag 2552 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 359 || |||||||||||| ||| | ||||||||||||||||||||||||| ||||| Sbjct: 2551 cgggaatgtcggcttttttaaggcaaacattggtgagaatccaatgccctgaaaa 2497 Score = 218 bits (110), Expect = 2e-53 Identities = 182/206 (88%) Strand = Plus / Minus Query: 368 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 427 |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagttagggcctaagattaggccgaaaggtg 2423 Query: 428 tagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacgga 487 |||||||||||||| |||| |||||||| |||||||| ||||||||| | |||| ||||| Sbjct: 2422 tagtcgatggacaagaggtgaatattccagtactacctcttgttggtcccgaggtacgga 2363 Query: 488 ggaggctaggttagccgaaagatggttataggtttaaggacacaaggtgaccctgctttt 547 ||||||||||||||| |||| |||||||| |||| ||||| ||||||| |||| |||| Sbjct: 2362 ggaggctaggttagcagaaaaatggttatcggttcaaggatgcaaggtgcccctattttt 2303 Query: 548 tcagggtaagaaggggtagagaaaat 573 | | ||| | |||||||||||||||| Sbjct: 2302 ttacggtcaaaaggggtagagaaaat 2277
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 398 bits (201), Expect = e-108 Identities = 201/201 (100%) Strand = Plus / Plus Query: 374 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 60 Query: 434 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 120 Query: 494 taggttagccgaaagatggttataggtttaaggacacaaggtgaccctgctttttcaggg 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 taggttagccgaaagatggttataggtttaaggacacaaggtgaccctgctttttcaggg 180 Query: 554 taagaaggggtagagaaaatg 574 ||||||||||||||||||||| Sbjct: 181 taagaaggggtagagaaaatg 201
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 391 bits (197), Expect = e-105 Identities = 392/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 189875 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 189934 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||| | ||| |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 189935 ggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 189994 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 189995 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 190054 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||| || ||||||||||||||||||| || ||||||| Sbjct: 190055 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggt 190112 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 190113 aggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaag 190172 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 190173 tgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 190232 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||| ||||||||||| |||||||||||||||| |||||| |||| |||| Sbjct: 190233 ggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaa 190292 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtac 460 |||||||||||||| ||||||| ||||||||||||| Sbjct: 190293 gcgtagtcgatggataacaggttaatattcctgtac 190328 Score = 391 bits (197), Expect = e-105 Identities = 392/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 151302 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 151361 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||| | ||| |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 151362 ggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 151421 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 151422 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 151481 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||| || ||||||||||||||||||| || ||||||| Sbjct: 151482 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggt 151539 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 151540 aggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaag 151599 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 151600 tgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 151659 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||| ||||||||||| |||||||||||||||| |||||| |||| |||| Sbjct: 151660 ggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaa 151719 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtac 460 |||||||||||||| ||||||| ||||||||||||| Sbjct: 151720 gcgtagtcgatggataacaggttaatattcctgtac 151755
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 383 bits (193), Expect = e-103 Identities = 202/205 (98%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122236 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaa 122177 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122176 ggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtt 122117 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122116 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgc 122057 Query: 185 gctgaagatgaacggggctaagcga 209 ||||||||||||||||||||||||| Sbjct: 122056 gctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 383 bits (193), Expect = e-103 Identities = 202/205 (98%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 12824777 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaa 12824718 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12824717 ggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtt 12824658 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12824657 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgc 12824598 Query: 185 gctgaagatgaacggggctaagcga 209 ||||||||||||||||||||||||| Sbjct: 12824597 gctgaagatgaacggggctaagcga 12824573 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 |||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2412040 tttcctccgcaaggttcgtccacggagggtgagttagggcctaagattaggc 2412091
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 383 bits (193), Expect = e-103 Identities = 391/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 188952 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 189011 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| |||| | || |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 189012 ggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 189071 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||| | |||||||||||||||||||||||||||| || || | | ||| Sbjct: 189072 tgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 189131 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||| || ||||||||||||||||||| | | ||||||| Sbjct: 189132 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggt 189189 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 189190 aggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaag 189249 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 189250 cgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 189309 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 189310 ggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaa 189369 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtac 460 |||||||||||||| ||||||| ||||||||||||| Sbjct: 189370 gcgtagtcgatggataacaggttaatattcctgtac 189405 Score = 383 bits (193), Expect = e-103 Identities = 391/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 150509 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 150568 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| |||| | || |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 150569 ggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 150628 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||| | |||||||||||||||||||||||||||| || || | | ||| Sbjct: 150629 tgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 150688 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||| || ||||||||||||||||||| | | ||||||| Sbjct: 150689 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggt 150746 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 150747 aggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaag 150806 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 150807 cgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 150866 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 150867 ggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaa 150926 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtac 460 |||||||||||||| ||||||| ||||||||||||| Sbjct: 150927 gcgtagtcgatggataacaggttaatattcctgtac 150962
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 379 bits (191), Expect = e-102 Identities = 206/211 (97%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 523 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 524 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 583 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 584 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 643 Query: 185 gctgaagatgaacggggctaagcgatctgcc 215 || |||||||||||||||||||||||||||| Sbjct: 644 gccgaagatgaacggggctaagcgatctgcc 674
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 369 bits (186), Expect = 7e-99 Identities = 380/442 (85%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||| |||||||||||||| | |||||||||| |||||||| || || | ||||| Sbjct: 945 gtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaa 1004 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||||||| Sbjct: 1005 ggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggtt 1064 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 1065 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgc 1124 Query: 185 gctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 || |||||||||||| || ||||| ||||||| || |||||||| |||| ||||||| Sbjct: 1125 gccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcgg 1183 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 |||||||||||||||| || ||||| |||| ||| || || ||||| |||||| Sbjct: 1184 taggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaa 1243 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 | |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 1244 gtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaaccca 1303 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| Sbjct: 1304 agggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaag 1363 Query: 424 ggcgtagtcgatggacaacagg 445 |||| || |||||||||||||| Sbjct: 1364 ggcgcagccgatggacaacagg 1385
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 369 bits (186), Expect = 7e-99 Identities = 380/442 (85%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||| |||||||||||||| | |||||||||| |||||||| || || | ||||| Sbjct: 958 gtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaa 1017 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||||||| Sbjct: 1018 ggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggtt 1077 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 1078 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgc 1137 Query: 185 gctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 || |||||||||||| || ||||| ||||||| || |||||||| |||| ||||||| Sbjct: 1138 gccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcgg 1196 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 |||||||||||||||| || ||||| |||| ||| || || ||||| |||||| Sbjct: 1197 taggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaa 1256 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 | |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 1257 gtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaaccca 1316 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| Sbjct: 1317 agggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaag 1376 Query: 424 ggcgtagtcgatggacaacagg 445 |||| || |||||||||||||| Sbjct: 1377 ggcgcagccgatggacaacagg 1398
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 369 bits (186), Expect = 7e-99 Identities = 380/442 (85%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||||| |||||||||||||| | |||||||||| |||||||| || || | ||||| Sbjct: 5532 gtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaa 5591 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||||||| Sbjct: 5592 ggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggtt 5651 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 5652 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgc 5711 Query: 185 gctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 243 || |||||||||||| || ||||| ||||||| || |||||||| |||| ||||||| Sbjct: 5712 gccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcgg 5770 Query: 244 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 303 |||||||||||||||| || ||||| |||| ||| || || ||||| |||||| Sbjct: 5771 taggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaa 5830 Query: 304 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 363 | |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 5831 gtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaaccca 5890 Query: 364 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 423 ||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| Sbjct: 5891 agggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaag 5950 Query: 424 ggcgtagtcgatggacaacagg 445 |||| || |||||||||||||| Sbjct: 5951 ggcgcagccgatggacaacagg 5972
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| || | | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| |||| ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaataggttaatattcttgtactacccc 1408
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 1e-97 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 357 bits (180), Expect = 3e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 357 bits (180), Expect = 3e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | ||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 357 bits (180), Expect = 3e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 7 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 66 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 67 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 126 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 127 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 186 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 187 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 246 ||| ||||||||| || || ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataggcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 247 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 306 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtg 1248 Query: 307 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 366 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 367 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 426 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 427 gtagtcgatggacaacaggtcaatattcctgtactacccc 466 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 22 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 81 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 82 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 141 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 142 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 202 ctaagcgatctgccgaagctgtgggatgtcaaaat 236 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 22 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 81 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 82 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 141 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 142 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 202 ctaagcgatctgccgaagctgtgggatgtcaaaat 236 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 347 bits (175), Expect = 2e-92 Identities = 175/175 (100%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 834 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 894 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 345 bits (174), Expect = 1e-91 Identities = 390/458 (85%), Gaps = 3/458 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccagcta 63 |||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| |||| Sbjct: 956 gtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccggcta 1015 Query: 64 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 123 |||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| |||| Sbjct: 1016 aggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaaggt 1075 Query: 124 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 183 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1076 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctctgg 1135 Query: 184 cgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcg 242 ||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | ||| | Sbjct: 1136 cgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattacatgg 1194 Query: 243 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 302 |||||||||||||| | |||| ||||| |||||||| | || ||| || | || Sbjct: 1195 gtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaacaga 1254 Query: 303 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 362 || |||||||||||||||||||||| |||| | ||||||||||| |||||||||||||| Sbjct: 1255 agtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaacct 1314 Query: 363 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 422 |||| ||||| || |||| ||||||||| |||||||||||||||||||||| | |||||| Sbjct: 1315 aagggttccttcggaaggctcgtccacgaagggtgagtcagggcctaagatgatgccgaa 1374 Query: 423 aggcgtagtcgatggacaacaggtcaatattcctgtac 460 ||||||||||||||||||||||||||| |||||||||| Sbjct: 1375 aggcgtagtcgatggacaacaggtcaaaattcctgtac 1412
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 337 bits (170), Expect = 2e-89 Identities = 426/509 (83%), Gaps = 3/509 (0%) Strand = Plus / Minus Query: 17 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 76 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 18079 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 18020 Query: 77 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 136 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 18019 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 17960 Query: 137 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 196 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 17959 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 17900 Query: 197 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 256 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 17899 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 17842 Query: 257 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 316 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 17841 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 17782 Query: 317 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 376 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 17781 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 17722 Query: 377 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 436 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 17721 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 17663 Query: 437 gacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggctag 496 || ||||||| |||||||||||||| ||||||||| | ||||||||| ||||||| Sbjct: 17662 gataacaggttaatattcctgtactgtttattgttggtaaagggggacggagaaggctag 17603 Query: 497 gttagccgaaagatggttataggtttaag 525 ||||||| | ||||||| |||||||| Sbjct: 17602 accagccgaatgttggttatcggtttaag 17574 Score = 337 bits (170), Expect = 2e-89 Identities = 426/509 (83%), Gaps = 3/509 (0%) Strand = Plus / Plus Query: 17 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 76 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 2787 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 2846 Query: 77 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 136 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2847 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 2906 Query: 137 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 196 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 2907 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 2966 Query: 197 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 256 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 2967 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 3024 Query: 257 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 316 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 3025 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 3084 Query: 317 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 376 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3085 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 3144 Query: 377 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 436 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 3145 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 3203 Query: 437 gacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggctag 496 || ||||||| |||||||||||||| ||||||||| | ||||||||| ||||||| Sbjct: 3204 gataacaggttaatattcctgtactgtttattgttggtaaagggggacggagaaggctag 3263 Query: 497 gttagccgaaagatggttataggtttaag 525 ||||||| | ||||||| |||||||| Sbjct: 3264 accagccgaatgttggttatcggtttaag 3292
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 4e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 29 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 88 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 89 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 148 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 149 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 208 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 209 atctgccgaagctgtgggat 228 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 315 bits (159), Expect = 9e-83 Identities = 376/446 (84%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 17 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 76 |||||||||||||| ||| | ||||||||||||| || |||||| |||||||||||||| Sbjct: 2654 gggataagcttcattgtcaaaagggaaacagcccagaccaccagttaaggcccctaaata 2713 Query: 77 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 136 || |||| |||||||||||| |||| ||| ||||||||||||| |||||||| Sbjct: 2714 gttactaagtggcaaaggaggtgggaatgcattaacaaccaggaggtttgcttagaagca 2773 Query: 137 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 196 || | |||||||||||||||||||||||||||| || || | | ||||| ||| ||||| Sbjct: 2774 gcaatcctttaaagagtgcgtaatagctcactggtctagtgatcctgcgccgaaaatgaa 2833 Query: 197 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 256 |||| ||||| | ||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 2834 cgggactaagtaacttgccgaatctgtgggatgttta--tgcatcggtaggggagcgttc 2891 Query: 257 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 316 || ||||| |||||| |||||| || || ||| |||| |||| ||||||||||| Sbjct: 2892 tgc-ttagattgaagcattaacgaaagtggatgtggacaaagcagaagtgagaatgtcgg 2950 Query: 317 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 376 |||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||| | Sbjct: 2951 cttgagtagcgaaaacattggtgagaatccaatgccccggaaacctaaggattcctctgg 3010 Query: 377 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 436 |||| ||||||||||||||| ||||||| ||||| || ||||||||||||||| | |||| Sbjct: 3011 aaggctcgtccacggagggttagtcaggacctaaaatgaggccgaaaggcgtaattgatg 3070 Query: 437 gacaacaggtcaatattcctgtacta 462 |||||||||| ||||||||||||||| Sbjct: 3071 gacaacaggttaatattcctgtacta 3096
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 309 bits (156), Expect = 5e-81 Identities = 204/220 (92%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||||| Sbjct: 1360 gtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagctaa 1419 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 1420 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtt 1479 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1480 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1539 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1540 gccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 239 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 298 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 ||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatcaagc 1780 Query: 419 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 |||| |||| |||||||||| ||||||| || |||||||||||| Sbjct: 1781 cgaatggcgcagtcgatggataacaggt-aacattcctgtacta 1823
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 309 bits (156), Expect = 5e-81 Identities = 233/259 (89%), Gaps = 6/259 (2%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 976 gtgagaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 1035 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| ||| ||||||||||| |||||||| ||||| |||||||||| Sbjct: 1036 ggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtt 1095 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 1096 tgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgc 1155 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||| ||| ||||||| | |||||||||||||||||| | |||||| Sbjct: 1156 gccgaatatgaatgggaataagcgacccgccgaagctgtgggatgtaa------atcggt 1209 Query: 245 aggggagcgttccgcctta 263 |||||||||||| |||||| Sbjct: 1210 aggggagcgttctgcctta 1228 Score = 224 bits (113), Expect = 2e-55 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand = Plus / Plus Query: 295 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 354 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 355 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 414 ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389 Query: 415 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 474 | | |||||| |||| ||||||||| |||| ||||||||| ||||||||| | | Sbjct: 1390 atactgaaaggtttagttgatggacaataggttaatattcctatactaccccct-----t 1444 Query: 475 acggagggacggaggaggctaggttagccgaaagatggttataggtttaagga 527 | ||||||||||| ||||||||||| || ||| ||||||||||||| ||||| Sbjct: 1445 cccgagggacggagtaggctaggttaaccaaaatatggttataggttaaagga 1497
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 289 bits (146), Expect = 5e-75 Identities = 385/462 (83%), Gaps = 7/462 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| | ||||||||||||||||||||||||||| |||| || |||||| |||||| Sbjct: 971 gtgagaccacgggggataagcttcatcgtcgagaggggaacattccagatcactagctaa 1030 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 | |||||||||||||||| ||| ||||||||||| ||||||| ||||| |||||||||| Sbjct: 1031 gccccctaaatgaccgctaagttataaaggaggt-agggtgcatagacatccaggaggtt 1089 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||| ||||||||||||||| |||| |||||||| ||||| | || ||||| Sbjct: 1090 tgcctagaagaagccaccctttaaagcgtgcataatagctaactgacaaacagctcttgc 1149 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 | ||| ||||||| | |||| |||| | |||||||||||||||| |||||||| Sbjct: 1150 accgaaaatgaacgagaataagagatccgtcgaagctgtgggatgt-----agcatcggt 1204 Query: 245 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 304 |||||||||||| ||||| ||||||||| | || ||| | || || ||||| |||| Sbjct: 1205 aggggagcgttcttccttatagggaagcacctgcacgagcagttgtggatgaagcagaag 1264 Query: 305 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 364 ||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||| || Sbjct: 1265 tgagaatgtcggcttgagtaacacaaacattggcgagaatccaattccccaaaaacctaa 1324 Query: 365 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 424 || ||||| | |||||||| |||||| ||||||||||||| |||||||||| | ||||| Sbjct: 1325 gggttccttcacaaggttcatccacgtagggtgagtcaggtcctaagatcatactgaaag 1384 Query: 425 gcgtagtcgatggacaacaggtcaatattcctgtactacccc 466 | || | |||||| || |||| |||| |||||||||||||| Sbjct: 1385 gttta-ttgatggataataggttaataatcctgtactacccc 1425
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 289 bits (146), Expect = 5e-75 Identities = 158/162 (97%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19152869 gtgagacgatgggggataagcttcatcgtcgagagggaaacaacccggatcaccagctaa 19152928 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19152929 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagatagccaggaggtt 19152988 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctca 166 ||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 19152989 tgcctagaagcagccaccctttaaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 289 bits (146), Expect = 5e-75 Identities = 158/162 (97%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 76264 gtgagacgatgggggataagcttcatcgtcgagagggaaacaacccggatcaccagctaa 76323 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 76324 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagatagccaggaggtt 76383 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctca 166 ||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 76384 tgcctagaagcagccaccctttaaagagtgcgttatatctca 76425
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 285 bits (144), Expect = 8e-74 Identities = 204/224 (91%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 969 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 1028 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||||||| |||| ||||||||||| | ||| | ||| |||||||||| Sbjct: 1029 ggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggaggtt 1088 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1089 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1148 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1149 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Plus Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||| |||| ||||| | ||||||||||| | ||||| ||||||| |||||| || Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaaggcca 1418 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 | |||||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 1419 gaccgaaaggtgtagtcgatggagaacaggttaatattcctgtact 1464 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atcggtaggggagcgttccgc 259 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 573 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 632 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 633 ggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccaggaggtt 692 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 693 tgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcctgc 752 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| |||||||||||||||||| ||||||||||||||| Sbjct: 753 gccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 143 bits (72), Expect = 7e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 933 ccaagggttcctccgcaaggctcgtccacggagggttagtcagggcctaaggcgaggccg 992 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 |||||||||||||||||||||| ||| || ||||| |||| Sbjct: 993 aaaggcgtagtcgatggacaacgggttaacattcccgtac 1032
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 241 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 300 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagataaggccg 1371 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctg 457 ||||||||||||||||| | ||||| |||||||||| Sbjct: 1372 aaaggcgtagtcgatggctatcaggttaatattcctg 1408 Score = 254 bits (128), Expect = 3e-64 Identities = 197/220 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 948 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccatctaa 1007 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||||||| Sbjct: 1008 ggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccaggaggtt 1067 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || || Sbjct: 1068 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctctcgc 1127 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1128 gccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 478 gagggacggaggaggctaggttagccg 504 |||||||| |||||||||||||||||| Sbjct: 1429 gagggacgaaggaggctaggttagccg 1455
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1106 gtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagctaa 1165 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| |||| ||||| |||| ||||||||||| | |||| | ||| |||||||||| Sbjct: 1166 ggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggaggtt 1225 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||| |||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1226 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1285 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1286 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Plus Query: 239 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 298 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 ||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggcgaggc 1589 Query: 419 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1590 cgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1632
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 262 bits (132), Expect = 1e-66 Identities = 225/255 (88%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 955 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 1014 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| |||| |||||||||||||||||| ||| | |||| ||||| |||||||||| Sbjct: 1015 ggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaaccaggaggtt 1074 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1075 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 1134 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||| ||||||| |||||||||||||| |||| || ||||||| Sbjct: 1135 gccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--tcatcggt 1192 Query: 245 aggggagcgttccgc 259 ||||||||||||||| Sbjct: 1193 aggggagcgttccgc 1207 Score = 176 bits (89), Expect = 5e-41 Identities = 177/205 (86%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||||| |||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttg-t 470 ||||||||||||||| |||||| |||||||| || ||||||||||| | ||| | Sbjct: 1360 gagaggccgaaaggcgtatccgatggccaacaggttaacattcctgtactgcaaattgtt 1419 Query: 471 tggtacggagggacggaggaggcta 495 |||||| ||||||||||| |||||| Sbjct: 1420 tggtaccgagggacggagaaggcta 1444
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 262 bits (132), Expect = 1e-66 Identities = 198/220 (90%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 963 gtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1022 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||||||||||||||| | ||| | ||| |||||||||| Sbjct: 1023 ggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggaggtt 1082 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||| Sbjct: 1083 tgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttcttgc 1142 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1143 gccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 242 bits (122), Expect = 1e-60 Identities = 158/170 (92%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1388 gcgaggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1437 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atcggtaggggagcgttccgc 259 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1402 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1451 Score = 238 bits (120), Expect = 2e-59 Identities = 195/220 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 975 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaa 1034 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||| ||| |||| |||||||||| | |||| ||||| |||||||||| Sbjct: 1035 ggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtt 1094 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1095 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 1154 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || || ||||||||| |||||| ||||||||||||||| Sbjct: 1155 gcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 3171 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 3220 Score = 238 bits (120), Expect = 2e-59 Identities = 195/220 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 2744 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaa 2803 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||||| ||| |||| |||||||||| | |||| ||||| |||||||||| Sbjct: 2804 ggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtt 2863 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 2864 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 2923 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || || ||||||||| |||||| ||||||||||||||| Sbjct: 2924 gcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 244 bits (123), Expect = 3e-61 Identities = 195/219 (89%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 170528 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaa 170469 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||||||| Sbjct: 170468 ggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggtt 170409 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || || Sbjct: 170408 tgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctctcgc 170349 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgt 223 || ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170348 gccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 244 bits (123), Expect = 3e-61 Identities = 195/219 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 122398 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaa 122457 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||||||| Sbjct: 122458 ggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggtt 122517 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || || Sbjct: 122518 tgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctctcgc 122577 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgt 223 || ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122578 gccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 421 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 170115 Query: 422 aaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 170114 caggcgtagtcgatggcaaactggttaatattcctgtact 170075 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 421 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 122811 Query: 422 aaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 122812 caggcgtagtcgatggcaaactggttaatattcctgtact 122851
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 244 bits (123), Expect = 3e-61 Identities = 223/255 (87%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||| ||| ||||||||||||||||||| || || | ||||| Sbjct: 958 gtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcggctaa 1017 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||||| || |||||||||||||||| | |||| ||||| |||||||||| Sbjct: 1018 ggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccaggaggtt 1077 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1078 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 1137 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-catcgg 243 || ||| ||||||||| ||||| |||||||||||||||||||| ||| || ||||| Sbjct: 1138 gccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgttatcgg 1197 Query: 244 taggggagcgttccg 258 ||||||||||||||| Sbjct: 1198 taggggagcgttccg 1212 Score = 139 bits (70), Expect = 1e-29 Identities = 143/166 (86%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 357 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 358 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 417 | ||||||| ||||||| | ||| ||||||| ||||||| ||||||| ||||||| ||| Sbjct: 1312 agcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgagg 1371 Query: 418 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 463 || || |||| |||||||||| |||||| || ||||||||||||| Sbjct: 1372 ccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactac 1417
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 244 bits (123), Expect = 3e-61 Identities = 195/219 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 989 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaa 1048 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||||||| Sbjct: 1049 ggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggtt 1108 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || || Sbjct: 1109 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctctcgc 1168 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgt 223 || ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1169 gccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 421 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 1402 Query: 422 aaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 1403 caggcgtagtcgatggcaaactggttaatattcctgtact 1442
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 242 bits (122), Expect = 1e-60 Identities = 221/254 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 2653 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 2712 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||||||| Sbjct: 2713 ggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactaggaggtt 2772 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | ||| Sbjct: 2773 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcctgc 2832 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 244 || ||| ||||||||||||||| ||| | ||||||||||||||| |||| |||||| Sbjct: 2833 gccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaatcggt 2892 Query: 245 aggggagcgttccg 258 |||||||||||||| Sbjct: 2893 aggggagcgttccg 2906 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 306 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 365 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 366 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 425 | |||||||| |||||||||| |||||||| |||| || |||||| ||| ||||||| Sbjct: 3015 ggttcctccggcaggttcgtccgcggagggttagtcgggacctaaggcgaggtcgaaagg 3074 Query: 426 cgtagtcgatggaca 440 ||||||||||||||| Sbjct: 3075 cgtagtcgatggaca 3089
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 242 bits (122), Expect = 1e-60 Identities = 195/218 (89%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 574 agacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggt 633 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| ||||||| ||| |||||||||||||||| | ||||| |||| ||||||||||||| Sbjct: 634 ccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccaggaggtttgc 693 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 |||||||||||||||||| ||||||||||||||||||||||| || ||||| ||| ||| Sbjct: 694 ctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctctt-cgcc 752 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| |||||||||||||||| ||| |||||||||||| Sbjct: 753 gaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 69.9 bits (35), Expect = 9e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 298 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 357 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 358 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 417 | || |||| |||| || ||| |||||| | |||||||||||| |||||| ||| Sbjct: 923 accctaagggttccagagccaggctcgtccgctctgggtgagtcaggtcctaaggcgagg 982 Query: 418 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 || || ||||||||||||||| ||| ||| || ||||| |||| Sbjct: 983 ccaaacggcgtagtcgatggataacgggttaacattcccgtac 1025
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 242 bits (122), Expect = 1e-60 Identities = 197/222 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1093 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 1152 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| ||||| Sbjct: 1153 ggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaaggtt 1212 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1213 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttcttgc 1272 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtggg 226 || ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1273 gccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||| |||| ||||||| | ||| ||||||| || |||| |||| || |||||| || Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaaggcca 1513 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1514 ggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1559
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 749 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 5434414 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 5434355 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 5434354 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 5434295 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 5434294 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 5434235 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434234 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 3897024 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 3897083 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 3897084 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 3897143 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 3897144 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 3897203 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897204 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2807135 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2807076 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 2807075 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 2807016 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 2807015 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 2806956 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806955 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 1005867 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 1005926 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 1005927 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 1005986 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 1005987 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 1006046 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006047 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5434056 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5433997 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 5433996 cgaaaggcgtagtcgatggaca 5433975 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 3897382 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 3897441 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 3897442 cgaaaggcgtagtcgatggaca 3897463 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2806777 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2806718 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 2806717 cgaaaggcgtagtcgatggaca 2806696 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 1006225 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 1006284 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 1006285 cgaaaggcgtagtcgatggaca 1006306
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 5944454 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 5944395 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 5944394 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 5944335 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 5944334 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 5944275 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944274 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 4916810 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 4916751 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 4916750 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 4916691 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 4916690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 4916631 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916630 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2503486 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2503545 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 2503546 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 2503605 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 2503606 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 2503665 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503666 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2378695 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2378754 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 2378755 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 2378814 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 2378815 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 2378874 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378875 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5944099 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5944040 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 5944039 cgaaaggcgtagtcgatggaca 5944018 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 4916455 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 4916396 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 4916395 cgaaaggcgtagtcgatggaca 4916374 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2503841 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2503900 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 2503901 cgaaaggcgtagtcgatggaca 2503922 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2380521 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2380580 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 2380581 cgaaaggcgtagtcgatggaca 2380602
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 7e-59 Identities = 158/171 (92%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 ||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1552 gccaggccgaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1602 Score = 218 bits (110), Expect = 2e-53 Identities = 194/222 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||| Sbjct: 1026 gtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagctaa 1085 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||| |||| ||||| |||| |||||||||| | ||| | ||| |||||||||| Sbjct: 1086 ggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtt 1145 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 1146 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgc 1205 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtggg 226 || ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1206 gccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 232 bits (117), Expect = 1e-57 Identities = 195/221 (88%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2485 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2544 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||||| || ||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 2545 ggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtt 2604 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 2605 tgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcctgc 2664 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2665 gccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2838 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2897 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 2898 aaaagcgtagtcgatggacaacgggttaacattcccgtac 2937
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 230 bits (116), Expect = 4e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | | || |||||||||||||||| | |||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtcttgc 749 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 919 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 978 Query: 412 atcaggccgaaaggcgtagtcgatggaca 440 ||| |||||||||||||||||||||| Sbjct: 979 gcgaggtcgaaaggcgtagtcgatggaca 1007
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 230 bits (116), Expect = 4e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 948 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactagctaa 1007 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||||||| Sbjct: 1008 ggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccaggaggtt 1067 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||||| |||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1068 tgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1127 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1128 gccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1358 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1407
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 230 bits (116), Expect = 4e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 25757 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactagctaa 25816 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||||||| Sbjct: 25817 ggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccaggaggtt 25876 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||||| |||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 25877 tgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttcttgc 25936 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25937 gccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 26167 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 26216
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 238 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 297 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 298 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 357 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 358 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 417 ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggcgagg 3198 Query: 418 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 ||||||||||||||||||||| ||| | | |||||||| |||| Sbjct: 3199 ccgaaaggcgtagtcgatggataacggattaatattcccgtac 3241 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 194 gaacggggctaagcgatctgccgaagctgtgggatgt 230 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 226 bits (114), Expect = 6e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| || ||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 630 ggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| ||||||||||||||||||||||| || |||| | ||| Sbjct: 690 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcctgc 749 Query: 185 gctgaagatgaacggggctaag 206 || ||| ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaag 771 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 980 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1029
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 6e-56 Identities = 195/222 (87%) Strand = Plus / Plus Query: 240 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 299 |||||||||||||||||||| | | | ||||| | || ||| |||||| |||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 300 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 359 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 360 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 419 || |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||| ||||| Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtcaggacctaagactaggcc 1452 Query: 420 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1453 gaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1494 Score = 93.7 bits (47), Expect = 6e-16 Identities = 172/213 (80%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 15 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 74 |||||||||||| | | ||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1030 gggggataagctccgttgtcaagagggaaacagcccagatcaccagctaaggcccctaaa 1089 Query: 75 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 134 || | || |||| ||||| ||| | ||| | ||| |||||||||| || |||||| Sbjct: 1090 tggtcactaagtggataaggatgtgagaatgcttaaacaaccaggaggttcgcttagaag 1149 Query: 135 cagc---caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 191 |||| | |||| ||||||||||||||||||||||| | |||| ||||||| || Sbjct: 1150 cagctatcttccttgaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgaga 1209 Query: 192 atgaacggggctaagcgatctgccgaagctgtg 224 ||| |||| ||||| || |||||||||||||| Sbjct: 1210 atggccgggactaagtgacctgccgaagctgtg 1242
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 195/221 (88%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 569 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 628 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||||| || ||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 629 ggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtt 688 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | | | Sbjct: 689 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcct-c 747 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| ||||||||||||||| |||| |||||||||||| Sbjct: 748 gccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 921 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 980 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 981 aaaagcgtagtcgatggacaacgggttaacattcccgtac 1020
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 224 bits (113), Expect = 2e-55 Identities = 223/258 (86%), Gaps = 5/258 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||| | Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctctt-c 748 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaatgcat 240 || ||| ||||||||||||||||||| | ||||||||||||||| | ||||| || Sbjct: 749 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaataaat 808 Query: 241 cggtaggggagcgttccg 258 |||||||||||||||||| Sbjct: 809 cggtaggggagcgttccg 826 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||| || |||| |||| || |||||||||| | |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccgctctgggttagtccggacctaag 980 Query: 412 atcaggccgaaaggcgtagtcgatggaca 440 ||| |||||||||||||||||||||| Sbjct: 981 gcgaggtcgaaaggcgtagtcgatggaca 1009
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 224 bits (113), Expect = 2e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| |||| Sbjct: 2050902 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaactaa 2050843 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| || | ||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 2050842 ggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggaggtt 2050783 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||| Sbjct: 2050782 ggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgc 2050723 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050722 gccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 224 bits (113), Expect = 2e-55 Identities = 194/221 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| |||| Sbjct: 1450599 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaactaa 1450658 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| || | ||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 1450659 ggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggaggtt 1450718 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||| Sbjct: 1450719 ggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgc 1450778 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450779 gccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 421 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 2050494 Query: 422 aaggcgtagtcgatgga 438 |||||||||||||||| Sbjct: 2050493 caggcgtagtcgatgga 2050477 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 421 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 1451007 Query: 422 aaggcgtagtcgatgga 438 |||||||||||||||| Sbjct: 1451008 caggcgtagtcgatgga 1451024
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 222 bits (112), Expect = 1e-54 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | | | Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcct-c 748 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 |||||||| ||||||||||||||||||| ||| || ||||| ||||| Sbjct: 979 gcgaggccgaacggcgtagtcgatggacaacgggttaaaattcccgtact 1028 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atcggtaggggagcgttccg 258 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 222 bits (112), Expect = 1e-54 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||| | Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatctt-c 748 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 419 cgaaaggcgtagtcgatggaca 440 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 137445 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 137504 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| ||||| Sbjct: 137505 ggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaaggtt 137564 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| ||||| Sbjct: 137565 tgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttcttgc 137624 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137625 gccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 48099 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 48040 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| ||||| Sbjct: 48039 ggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaaggtt 47980 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| ||||| Sbjct: 47979 tgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttcttgc 47920 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47919 gccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 137860 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 137909 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 47684 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 47635
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 159 bits (80), Expect = 1e-35 Identities = 185/220 (84%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 1032 gtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaa 1091 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||| || | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1092 ggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1151 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1152 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1211 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || || ||| |||| ||||| || |||||||||||||| Sbjct: 1212 gccgataatggccgggactaagtgacctgccgaagctgtg 1251
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 159 bits (80), Expect = 1e-35 Identities = 185/220 (84%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 1032 gtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaa 1091 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||| || | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1092 ggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1151 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1152 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1211 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || || ||| |||| ||||| || |||||||||||||| Sbjct: 1212 gccgataatggccgggactaagtgacctgccgaagctgtg 1251
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 218 bits (110), Expect = 2e-53 Identities = 180/202 (89%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 571 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 630 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| ||| || ||||| |||||||||||| ||||| ||||| |||||||||| Sbjct: 631 ggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggaggtt 690 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | | | Sbjct: 691 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-c 749 Query: 185 gctgaagatgaacggggctaag 206 || ||| ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaag 771 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||| || |||| |||||||| | || |||||| ||||||||||||||||||||||| Sbjct: 917 cccgaaaccctaagggttcctccggacggctcgtccgcggagggtgagtcagggcctaag 976 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcc 455 |||| ||| |||||||||||||| ||| ||| || ||||| Sbjct: 977 gcgaggctgaacagcgtagtcgatggataacgggttaaaattcc 1020
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 218 bits (110), Expect = 2e-53 Identities = 191/218 (87%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 3327971 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 3328030 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 3328031 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 3328090 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| Sbjct: 3328091 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgcc 3328150 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328151 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 218 bits (110), Expect = 2e-53 Identities = 191/218 (87%) Strand = Plus / Minus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 2450757 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 2450698 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 2450697 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 2450638 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| Sbjct: 2450637 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgcc 2450578 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450577 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 3328322 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 3328381 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 3328382 agaggcgtagtcgatggacaaccggtcaatattccggtact 3328422 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 2450406 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 2450347 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 2450346 agaggcgtagtcgatggacaaccggtcaatattccggtact 2450306
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 216 bits (109), Expect = 6e-53 Identities = 193/221 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2484 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2543 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||||| || ||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 2544 ggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtt 2603 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 2604 tgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgc 2663 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2664 gccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2837 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2896 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 ||| |||||||||||||| ||| ||| || ||||| |||| Sbjct: 2897 aaaagcgtagtcgatggataacgggttaacattcccgtac 2936
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 216 bits (109), Expect = 6e-53 Identities = 193/221 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| |||| Sbjct: 2313250 gtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaactaa 2313309 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| || | ||||||||| | |||||||||||||||| |||||| |||||||||| Sbjct: 2313310 ggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggaggtt 2313369 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||| Sbjct: 2313370 ggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgc 2313429 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313430 gccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 216 bits (109), Expect = 6e-53 Identities = 193/221 (87%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| |||| Sbjct: 1108597 gtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaactaa 1108538 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| || | ||||||||| | |||||||||||||||| |||||| |||||||||| Sbjct: 1108537 ggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggaggtt 1108478 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||| Sbjct: 1108477 ggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgc 1108418 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108417 gccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 2313648 Query: 412 atcaggccgaaaggcgtagtcgatggaca 440 ||||||| |||||||||||||||||| Sbjct: 2313649 gcgaggccgacaggcgtagtcgatggaca 2313677 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 1108199 Query: 412 atcaggccgaaaggcgtagtcgatggaca 440 ||||||| |||||||||||||||||| Sbjct: 1108198 gcgaggccgacaggcgtagtcgatggaca 1108170
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 |||||||||||||||||||||||| ||| ||| |||||||| |||| Sbjct: 1846 gcgaggccgaaaggcgtagtcgatggataacgggttaatattcccgtac 1894 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 194 gaacggggctaagcgatctgccgaagctgtgggatgt 230 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 214 bits (108), Expect = 2e-52 Identities = 196/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | | | Sbjct: 690 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcct-c 748 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| || ||| | ||||||||| | |||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacaccccgaaa 927 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 || |||| ||||||||| ||||||||||||||||||| |||| || |||||| ||| Sbjct: 928 ccctaagggttcctccgccaggttcgtccacggagggttagtcgggtcctaaggcgaggt 987 Query: 419 cgaaaggcgtagtcgatggaca 440 |||| ||||||||||||||||| Sbjct: 988 cgaagggcgtagtcgatggaca 1009
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||| Sbjct: 936 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagctaa 995 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| |||| ||||| |||| ||||||||||| | |||| | |||||||||||||| Sbjct: 996 ggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggaggtt 1055 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1056 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1115 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 228 || ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1116 gccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| ||||| || Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaaagcca 1355 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 |||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 1356 ggccgaaaggcgtagttgatggaaaacaggttaatattcctgtact 1401 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atcggtaggggagcgttccg 258 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 194 gaacggggctaagcgatctgccgaagctgtgggat 228 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||| ||||| ||||||| | ||||| ||||||| |||||| Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1401 gcgaggtcgaaaggcgtagtcgatggaaaacaggtcaacattcctgtact 1450
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 210 bits (106), Expect = 4e-51 Identities = 179/202 (88%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| || ||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 630 ggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | | Sbjct: 690 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcct-c 748 Query: 185 gctgaagatgaacggggctaag 206 || ||| ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaag 770 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 978 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1027
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 210 bits (106), Expect = 4e-51 Identities = 190/218 (87%) Strand = Plus / Minus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 2333864 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggt 2333805 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| |||| | | || |||| ||||||||||||| ||| ||||| ||||||||||||| Sbjct: 2333804 ccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccaggaggtttgc 2333745 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | ||||| Sbjct: 2333744 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcctgcgcc 2333685 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333684 gaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 186 bits (94), Expect = 5e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || |||||| Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 |||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2333461 gcgaggccgaaaggcgtagtcgatggacaactggtcaatattccagtact 2333412
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 296 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 355 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 356 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 415 |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtcagggcctaaggcga 3118 Query: 416 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||| |||| |||||||||||||| |||||| |||||||||||||| Sbjct: 3119 ggctgaaaagcgtagtcgatggatgacaggttaatattcctgtact 3164 Score = 157 bits (79), Expect = 5e-35 Identities = 212/253 (83%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| | ||||||||||||| || |||||||||| Sbjct: 2712 gtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaa 2771 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||| || |||| |||||| ||||| |||| ||||| |||||||||| Sbjct: 2772 ggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggaggtt 2831 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 2832 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcctgc 2891 Query: 185 gctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcatcgg 243 || ||| ||||| ||| || || ||| ||||||||||||||||||| || |||||| Sbjct: 2892 gccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---catcgg 2947 Query: 244 taggggagcgttc 256 ||||||||||||| Sbjct: 2948 taggggagcgttc 2960
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 208 bits (105), Expect = 1e-50 Identities = 189/217 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || || ||||||| Sbjct: 960 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagctaa 1019 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| |||||||||| | ||| | ||| |||||||||| Sbjct: 1020 ggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtt 1079 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 1080 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgc 1139 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagct 221 || ||| |||| |||| ||||||| ||||||||||| Sbjct: 1140 gccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 413 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 427 gtagtcgatggacaacaggtcaatattcctgtact 461 |||||||||||| ||||||| |||||||||||||| Sbjct: 1397 gtagtcgatggaaaacaggttaatattcctgtact 1431
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 150997 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 150996 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 150948 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 43206 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 43207 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 43255 Score = 167 bits (84), Expect = 5e-38 Identities = 186/220 (84%) Strand = Plus / Minus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 151410 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 151351 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 151350 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 151291 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 151290 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 151231 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || || ||| |||| ||||| || |||||||||||||| Sbjct: 151230 gccgataatggccgggactaagtgacctgccgaagctgtg 151191 Score = 167 bits (84), Expect = 5e-38 Identities = 186/220 (84%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 42793 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 42852 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 42853 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 42912 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 42913 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 42972 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || || ||| |||| ||||| || |||||||||||||| Sbjct: 42973 gccgataatggccgggactaagtgacctgccgaagctgtg 43012
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 208 bits (105), Expect = 1e-50 Identities = 189/217 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||| ||||||||||||||| || || ||||||| Sbjct: 2842 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagctaa 2901 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| ||||| |||| |||||||||| | ||| | ||| |||||||||| Sbjct: 2902 ggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtt 2961 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 2962 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgc 3021 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagct 221 || ||| |||| |||| ||||||| ||||||||||| Sbjct: 3022 gccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 242 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 301 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 302 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 361 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 362 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 413 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 427 gtagtcgatggacaacaggtcaatattcctgtact 461 |||||||||||| ||||||| |||||||||||||| Sbjct: 3279 gtagtcgatggaaaacaggttaatattcctgtact 3313
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1378 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 1379 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1427 Score = 167 bits (84), Expect = 5e-38 Identities = 186/220 (84%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 965 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 1024 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1025 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1084 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1085 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1144 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || || ||| |||| ||||| || |||||||||||||| Sbjct: 1145 gccgataatggccgggactaagtgacctgccgaagctgtg 1184
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Plus Query: 306 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 366 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 425 | ||||||| | ||||||||||| || |||| ||||||| ||||||| |||||| ||||| Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtcaggacctaagaccaggccaaaagg 1406 Query: 426 cgtagtcgatggacaacaggtcaatattcctgtacta 462 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1407 cgtcgtcgatggaaaacaggttaatattcctgtacta 1443 Score = 168 bits (85), Expect = 1e-38 Identities = 187/221 (84%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 981 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 1040 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1041 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1100 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1101 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1160 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 || || ||| |||| ||||| || ||||||||||||||| Sbjct: 1161 gccgataatggccgggactaagtgacctgccgaagctgtgg 1201
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 206 bits (104), Expect = 6e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactaggaggtt 689 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | ||| Sbjct: 690 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcctgc 749 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 750 gccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 |||||| |||||| ||||||||||||||||||| || ||| | ||||||||| | | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacac 920 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 980 Query: 412 atcaggccgaaaggcgtagtcgatggaca 440 |||||||| ||||||||||||||||| Sbjct: 981 gcgaggccgaacggcgtagtcgatggaca 1009
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 204 bits (103), Expect = 2e-49 Identities = 178/203 (87%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||| Sbjct: 569 gtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagctaa 628 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 || ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||||| Sbjct: 629 ggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggaggtt 688 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 ||||||||||||||||||||| ||||||||||||||||||||||| || |||| | ||| Sbjct: 689 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcctgc 748 Query: 185 gctgaagatgaacggggctaagc 207 || ||| |||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagc 771 Score = 157 bits (79), Expect = 5e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||| || |||| |||||||| ||||||||||| |||||||| || | || |||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggttagccgggacctaag 966 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 458 | |||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 967 gcgaagccgaagggcgtagtcgatggataacaggtgtatattcctgt 1013
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 ||| |||| |||||| ||||||||||||| || |||| |||||||||||||| |||| Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtcagggcctaaggcgaggc 1991 Query: 419 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 |||| ||||||||||||||| ||||||| |||||||||||||| Sbjct: 1992 cgaatggcgtagtcgatggaaaacaggttaatattcctgtact 2034 Score = 109 bits (55), Expect = 1e-20 Identities = 154/187 (82%) Strand = Plus / Plus Query: 38 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 97 ||||||||||||| ||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 1346 agggaaacagcccagatcaccagctaaggcccctaaatggccactaagtggaaaaggatg 1405 Query: 98 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 157 || | |||| | ||| ||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 1406 tgagaatgcataaacaaccaggaggtttgcttagaagcagcaatcctttaaagagttcgt 1465 Query: 158 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 217 || || ||||| | |||| ||||||| ||| || | |||| ||||| | ||||||| Sbjct: 1466 aacagaacactggtaaagcgttcttgcgccgaaaataaccgggactaagtggcctgccga 1525 Query: 218 agctgtg 224 ||||||| Sbjct: 1526 agctgtg 1532
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377 Query: 359 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 418 ||| || ||||||| | ||||||||||| || |||||||||||| |||||||| |||| Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaagattaggc 1437 Query: 419 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 |||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1438 cgaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1480 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 36 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 95 ||||||||||||||| ||||| ||||||||||||||||||| | || |||| |||||| Sbjct: 1024 agagggaaacagcccagatcattagctaaggcccctaaatgatcactaagtggaaaagga 1083 Query: 96 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 155 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1084 tgtgagaatgcccaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1143 Query: 156 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 215 |||||||||||||| | |||| |||||| || ||| |||| ||||| |||||||| Sbjct: 1144 gtaatagctcactggtaaagcgtttttgcgccgacaatggccgggactaagtgatctgcc 1203 Query: 216 gaagctgtg 224 ||||||||| Sbjct: 1204 gaagctgtg 1212 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atcggtaggggagcgttccg 258 |||||||||||||||||||| Sbjct: 1259 atcggtaggggagcgttccg 1278
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 2e-49 Identities = 157/175 (89%) Strand = Plus / Plus Query: 287 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 346 |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555 Query: 347 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 406 ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| | Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggac 1615 Query: 407 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 |||||| |||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 1616 ctaagactaggccgaaaggcgtcgtcgatggaaaacaggcgaatattcctgtact 1670 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/169 (81%), Gaps = 4/169 (2%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcat-cgtcgagagggaaacagcccggatcaccagcta 63 ||||||| | |||||||||||| | | ||| ||||||||||||||| ||||||||| || Sbjct: 1085 gtgagactacgggggataagctccgtatgtcaagagggaaacagcccagatcaccagata 1144 Query: 64 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 123 ||||||| ||||| | || |||| |||||| ||| | ||| | ||| ||||||||| Sbjct: 1145 aggccccaaaatggtcactaagtggaaaaggatgtgagaatgcttaaacaaccaggaggt 1204 Query: 124 ttgcctagaagcagc---caccctttaaagagtgcgtaatagctcactg 169 | || |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1205 tcgcttagaagcagctatcttccttgaaagagtgcgtaatagctcactg 1253
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 202 bits (102), Expect = 9e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 573 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 632 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| ||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 633 ccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgc 692 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | | ||| Sbjct: 693 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgcc 751 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| |||||||||||||||| || |||||||||||| Sbjct: 752 gaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 |||||| |||||||| |||| |||||| |||||||| |||| || |||||| |||||| Sbjct: 926 ccaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 |||||||||||||||||||||| ||| |||||||| |||| Sbjct: 986 aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 202 bits (102), Expect = 9e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| || |||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 573 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggt 632 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| ||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 633 cccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgc 692 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | | ||| Sbjct: 693 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgcc 751 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| |||||||||||||||| ||| |||||||||||| Sbjct: 752 gaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 ||||||| || |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 915 cccgaaaccctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 974 Query: 412 atcaggccgaaaggcgtagtcgatggaca 440 | |||||| ||||||||||||||||| Sbjct: 975 gcgaagccgaagggcgtagtcgatggaca 1003
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 202 bits (102), Expect = 9e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 574 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 633 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 634 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 693 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 694 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 752 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 753 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 924 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 983 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 984 agaggcgtagtcgatggacaaccggtcaatattccggtact 1024
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 9e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 300 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 359 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 360 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 419 || |||| ||||||| | |||||||||| || |||||||||||| |||||| |||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtcaggacctaaggccaggcc 1539 Query: 420 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 1540 gaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1581 Score = 131 bits (66), Expect = 3e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 16 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 75 |||||||||||| || || ||||||||||||||| ||||||||||||||||||| |||| Sbjct: 1021 ggggataagcttgattttcaagagggaaacagcccagatcaccagctaaggccccaaaat 1080 Query: 76 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 135 | || |||| |||||| ||||| ||| | ||| ||||||||||||| ||||||| Sbjct: 1081 ggtgactaagtggaaaaggatgtgggaatgctgaaacaaccaggaggtttgcttagaagc 1140 Query: 136 agccaccctttaaagagtgcgtaatagctcactg 169 |||||||||| ||||||||||||||||||||||| Sbjct: 1141 agccacccttcaaagagtgcgtaatagctcactg 1174
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 200 bits (101), Expect = 4e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| || |||||||||| ||||||||||||||||||||||| || | |||||||||| Sbjct: 571 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggt 630 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 631 ccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgc 690 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 691 ctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 749 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggat 228 ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 750 gaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcct 456 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 200 bits (101), Expect = 4e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 8 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 67 ||||| || |||||||||| ||||||||||||||||||||||| || | |||||||||| Sbjct: 571 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggt 630 Query: 68 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 127 ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 631 ccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgc 690 Query: 128 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 187 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 691 ctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 749 Query: 188 gaagatgaacggggctaagcgatctgccgaagctgtgggat 228 ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 750 gaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcct 456 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 200 bits (101), Expect = 4e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 968 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 1027 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||| || ||| |||| |||||||||| ||| ||||| |||||||||| Sbjct: 1028 ggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggaggtt 1087 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 169 ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1088 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 1381 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 1430
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 200 bits (101), Expect = 4e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2706 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 2765 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 ||||||||||| || ||| |||| |||||||||| ||| ||||| |||||||||| Sbjct: 2766 ggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggaggtt 2825 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 169 ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2826 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 3118 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 3119 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 3168
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 200 bits (101), Expect = 4e-48 Identities = 188/217 (86%) Strand = Plus / Minus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 114470 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 114411 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 114410 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 114351 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 114350 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 114291 Query: 194 gaacggggctaagcgatctgccgaagctgtgggatgt 230 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 114290 gaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 200 bits (101), Expect = 4e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 3047 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 3106 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 3107 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 3166 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 3167 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 3226 Query: 194 gaacggggctaagcgatctgccgaagctgtgggatgt 230 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 3227 gaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 359 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 417 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 114057 Query: 418 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 114056 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 114014 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 299 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 358 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 359 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 417 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 3460 Query: 418 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 460 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 3461 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 3503 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 catcggtaggggagcgttccg 258 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 catcggtaggggagcgttccg 258 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 198 bits (100), Expect = 1e-47 Identities = 190/220 (86%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 ||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 961 gtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagttaa 1020 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||||| Sbjct: 1021 ggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggaggtt 1080 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 184 |||||||||||||||| |||| ||||||||||||||||||||||| || |||| | ||| Sbjct: 1081 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcctgc 1140 Query: 185 gctgaagatgaacggggctaagcgatctgccgaagctgtg 224 || ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1141 gccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 105 bits (53), Expect = 2e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 301 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 360 |||| |||||||||||||||||||||| || |||| |||||| ||||| |||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacgtaattgaaggtgtgaatccttcaccccggaaac 1318 Query: 361 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 420 |||||| ||||||| | ||| ||||||| ||||||| ||||||| |||||| ||||| Sbjct: 1319 ccaagggttcctcctccaggctcgtccaaggagggttagtcaggtcctaaggcaaggcca 1378 Query: 421 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 || ||||||||||||||| |||||||||| ||||||||||| Sbjct: 1379 aacggcgtagtcgatggaaaacaggtcaacattcctgtact 1419
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 35 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 94 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 95 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 153 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 154 gcgtaatagctcactg 169 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 35 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 94 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 95 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 153 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 154 gcgtaatagctcactg 169 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagg 40 |||||||| ||||||||||||||||||||||||||| Sbjct: 365153 gtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 110 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 169 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 gtcgagagggaaacagcccggatc 55 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 6e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 194 gaacggggctaagcgatctgccgaagctgtgggat 228 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 6e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 14 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 73 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 74 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 133 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 134 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 193 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 194 gaacggggctaagcgatctgccgaagctgtgggat 228 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 287 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 346 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 347 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 406 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 193167 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 193226 Query: 407 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 193227 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 193281 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 287 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 346 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 347 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 406 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 143615 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 143556 Query: 407 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 461 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 143555 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 143501
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Plus Query: 312 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 371 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508 Query: 372 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 431 ||| | ||||||||||| || |||| ||||||| |||||||||||||| || ||||| || Sbjct: 3509 tccactaggttcgtccatggggggttagtcaggacctaagatcaggccaaacggcgtcgt 3568 Query: 432 cgatggacaacaggtcaatattcctgtacta 462 ||||||| ||||||| ||||||||||||||| Sbjct: 3569 cgatggaaaacaggttaatattcctgtacta 3599 Score = 157 bits (79), Expect = 5e-35 Identities = 172/203 (84%) Strand = Plus / Plus Query: 22 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 81 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 82 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 141 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 142 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 201 |||| ||||||||||||||||||||||| | |||| ||||||| || ||| |||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccggga 2886 Query: 202 ctaagcgatctgccgaagctgtg 224 ||||| || |||||||||||||| Sbjct: 2887 ctaagtgacctgccgaagctgtg 2909
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 196 bits (99), Expect = 6e-47 Identities = 153/171 (89%) Strand = Plus / Plus Query: 292 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 351 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1369 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1428 Query: 352 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 411 |||||||||| |||| |||| ||| ||| |||||| ||| |||| ||||||| |||||| Sbjct: 1429 cccgaaaacctaagggttccaccggtagggtcgtccgcggtgggttagtcaggacctaag 1488 Query: 412 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 462 |||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1489 gccaggccgaaaggcgcagtcgatggcaaacaggtgaatattcctgtacta 1539 Score = 147 bits (74), Expect = 5e-32 Identities = 186/222 (83%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 5 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 64 |||||||||| ||||||||||| |||||| ||||||||||||||| || || ||||||| Sbjct: 1076 gtgagacgatcggggataagctcgatcgtcaagagggaaacagcccagaccatcagctaa 1135 Query: 65 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 124 |||||| ||||||| ||| |||| |||||| ||| ||| || ||| |||||||||| Sbjct: 1136 ggccccaaaatgacagctaagtggcaaaggatgtgaaaatgcgaaaacaaccaggaggtt 1195 Query: 125 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat-cgagcgcccttg 183 ||| ||||||||||| |||||||||||||||||||||||||||| | | |||| |||| Sbjct: 1196 tgctcagaagcagccatcctttaaagagtgcgtaatagctcactggtccaagcgttcttg 1255 Query: 184 cgctgaagatgaacggggctaagcgatctgccgaagctgtgg 225 ||| ||| || | |||| ||||| |||||||||||||||| Sbjct: 1256 cgccgaaaattatcgggactaagttgtctgccgaagctgtgg 1297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,441,611 Number of Sequences: 3902068 Number of extensions: 3441611 Number of successful extensions: 63475 Number of sequences better than 10.0: 2463 Number of HSP's better than 10.0 without gapping: 2494 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 49653 Number of HSP's gapped (non-prelim): 13089 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
