ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2o16 |
|---|---|
| Clone Library Name | barley_pub |
>TIPT_DROME (Q9U3V5) Protein tiptop| Length = 1024 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +1 Query: 244 HGTKSNPASRDCSMDPTEPRWRMNSSFSPPSRGWDCMYSSDGLPHRTPDAPHDHPP 411 H +S+ ASRD S + R+ SS++P + PH++PD P PP Sbjct: 704 HLLRSSFASRDRSASESSSASRVESSYTPDRQ--------QATPHKSPDTPAPPPP 751
>P2RY2_MOUSE (P35383) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor 1) (P2U1) (ATP| receptor) (Purinergic receptor) Length = 373 Score = 31.6 bits (70), Expect = 1.8 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = -2 Query: 345 PSPRRRREARIHPPTRLCRIHGTVSASRIRLCPMWPSGHAAKSARL 208 PSP+ RR+ +H P R R +VS+ R P+G K RL Sbjct: 328 PSPQARRKLGLHRPNRTVRKDLSVSSDDSRRTESTPAGSETKDIRL 373
>YCX7_YEAST (P25652) Very hypothetical 19.8 kDa protein in ABP1 5'region| Length = 171 Score = 30.8 bits (68), Expect = 3.2 Identities = 15/54 (27%), Positives = 31/54 (57%) Frame = +2 Query: 386 LMLHTIIHLMCHHYHLIVKEVEVHLAVTST*ITTILYLMEHFLILVVLLTAFRL 547 L+ H ++H +C H +V + + L + + ++ L++ FL+L+VL A R+ Sbjct: 64 LLDHRLLHFLCRSCHWLVLVLLLLLLLLLLLLLLLVALVQRFLVLLVLADARRV 117
>SILE_SALTY (Q9Z4N3) Silver-binding protein silE precursor| Length = 143 Score = 30.4 bits (67), Expect = 4.1 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -3 Query: 248 PCGLAATQQRAPVLTNLPNHEQILLAYFCLTNKAYSQRR*LVISKSRDRERQIVSP 81 P G+ T AP + + HEQ ++A+ +TN + + +V S R Q VSP Sbjct: 46 PVGIQGT---APRMAGMDQHEQAIIAHETMTNGSADAHQKMVESHQRMMGSQTVSP 98
>BUR1_YARLI (Q6C842) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 706 Score = 30.4 bits (67), Expect = 4.1 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = +1 Query: 262 PASRDCSMDPTEPRWRMNSSFSPPSRGWDCMYSSDGLPHRTPDAPHDHP 408 P RD S D PR R + PP RG Y S P R P+ P D P Sbjct: 389 PRDRDRSRDSRPPRERDSRDRRPP-RG---RYDSFERPERRPEGPRDGP 433
>AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 548 Score = 30.0 bits (66), Expect = 5.4 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = -3 Query: 368 PSDEYMQSHPRDGGEKLEFIRQRGSVGSME-----QSLLAGLDFVPCGLAATQQRAPVLT 204 PSD +M GGE ++I + G + E Q +L+G+D+ + + P Sbjct: 86 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 145 Query: 203 NLPNHEQILLAYFCLTN 153 L H +A F L+N Sbjct: 146 LLDAHMNAKIADFGLSN 162
>AAPK1_MOUSE (Q5EG47) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 548 Score = 30.0 bits (66), Expect = 5.4 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = -3 Query: 368 PSDEYMQSHPRDGGEKLEFIRQRGSVGSME-----QSLLAGLDFVPCGLAATQQRAPVLT 204 PSD +M GGE ++I + G + E Q +L+G+D+ + + P Sbjct: 86 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 145 Query: 203 NLPNHEQILLAYFCLTN 153 L H +A F L+N Sbjct: 146 LLDAHMNAKIADFGLSN 162
>LIME1_MOUSE (Q9EQR5) Lck-interacting transmembrane adapter 1 (Lck-interacting| molecule) Length = 269 Score = 30.0 bits (66), Expect = 5.4 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = +1 Query: 247 GTKSNPASRDCSMDPTEPRWRMNSSFSPPSRGWDCMYSSDGLPHRTPDAPHDHP 408 G +S+ A R SMD PRW S S S+ + + LP P AP P Sbjct: 76 GPRSSIAPRPASMDLLHPRWLEMSRGSTRSQVPNSAFPPRQLPRAPPAAPATAP 129
>AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 30.0 bits (66), Expect = 5.4 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = -3 Query: 368 PSDEYMQSHPRDGGEKLEFIRQRGSVGSME-----QSLLAGLDFVPCGLAATQQRAPVLT 204 PSD +M GGE ++I + G + E Q +L+G+D+ + + P Sbjct: 88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 147 Query: 203 NLPNHEQILLAYFCLTN 153 L H +A F L+N Sbjct: 148 LLDAHMNAKIADFGLSN 164
>AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 30.0 bits (66), Expect = 5.4 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = -3 Query: 368 PSDEYMQSHPRDGGEKLEFIRQRGSVGSME-----QSLLAGLDFVPCGLAATQQRAPVLT 204 PSD +M GGE ++I + G + E Q +L+G+D+ + + P Sbjct: 88 PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 147 Query: 203 NLPNHEQILLAYFCLTN 153 L H +A F L+N Sbjct: 148 LLDAHMNAKIADFGLSN 164
>AAPK2_PONPY (Q5RD00) 5'-AMP-activated protein kinase catalytic subunit alpha-2| (EC 2.7.11.1) (AMPK alpha-2 chain) Length = 552 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = -3 Query: 368 PSDEYMQSHPRDGGEKLEFIRQRGSVGSME-----QSLLAGLDFVPCGLAATQQRAPVLT 204 P+D +M GGE ++I + G V ME Q +L+ +D+ + + P Sbjct: 86 PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV 145 Query: 203 NLPNHEQILLAYFCLTN 153 L H +A F L+N Sbjct: 146 LLDAHMNAKIADFGLSN 162
>AAPK2_HUMAN (P54646) 5'-AMP-activated protein kinase catalytic subunit alpha-2| (EC 2.7.11.1) (AMPK alpha-2 chain) Length = 552 Score = 29.6 bits (65), Expect = 7.0 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = -3 Query: 368 PSDEYMQSHPRDGGEKLEFIRQRGSVGSME-----QSLLAGLDFVPCGLAATQQRAPVLT 204 P+D +M GGE ++I + G V ME Q +L+ +D+ + + P Sbjct: 86 PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV 145 Query: 203 NLPNHEQILLAYFCLTN 153 L H +A F L+N Sbjct: 146 LLDAHMNAKIADFGLSN 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,176,889 Number of Sequences: 219361 Number of extensions: 1711147 Number of successful extensions: 4272 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4269 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
