ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2o15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independen... 30 1.8
2LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent ... 30 1.8
3HILS1_MOUSE (Q9QYL0) Spermatid-specific linker histone H1-like p... 30 2.4
4SNX23_HUMAN (Q96L93) Kinesin-like motor protein C20orf23 (Sortin... 30 2.4
5DCS2_GOSAR (Q39760) (+)-delta-cadinene synthase isozyme XC14 (EC... 30 3.1
6LPHN2_MOUSE (Q8JZZ7) Latrophilin-2 (Calcium-independent alpha-la... 29 4.0
7HIOM_CHICK (Q92056) Hydroxyindole O-methyltransferase (EC 2.1.1.... 29 4.0
8LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independen... 29 5.3
9INS_PROGU (P01331) Insulin [Contains: Insulin B chain; Insulin A... 28 6.9
10SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precurs... 28 9.0
11HISX_SYMTH (Q67KH6) Histidinol dehydrogenase (EC 1.1.1.23) (HDH) 28 9.0
12DCDA_METTH (O27390) Diaminopimelate decarboxylase (EC 4.1.1.20) ... 28 9.0

>LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independent|
           alpha-latrotoxin receptor 2) (Latrophilin homolog 1)
           (Lectomedin-1)
          Length = 1459

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI-PADFPE 374
           S   ++    LLD   E  F  +D LL PT  +  P + +   + ++  EG I    FP 
Sbjct: 630 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTENIVLEVAVLSTEGQIQDFKFPL 688

Query: 375 GV 380
           G+
Sbjct: 689 GI 690



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>LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent|
           alpha-latrotoxin receptor 2) (CIRL-2)
          Length = 1487

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +3

Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI 356
           S   ++    LLD   E  F  +D LL PT  +  P D +   + ++  EG +
Sbjct: 634 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTDNIVLEVAVLSTEGQV 685



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>HILS1_MOUSE (Q9QYL0) Spermatid-specific linker histone H1-like protein (TISP64)|
          Length = 170

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 19/130 (14%)
 Frame = +2

Query: 35  PPISSPATHLXXXXXXXKKPTHHTA*CDSLLYAHQNHAIS-----EGASATSYRQT---W 190
           P  S   T         +KPT       +L     ++ +S     +  S T Y  T   W
Sbjct: 17  PSQSESQTESDISTQSLRKPTMSYVILKTLADKRVHNCVSLATLKKAVSITGYNMTHNTW 76

Query: 191 R-----------GVRCHEQCLQGTPGCIC*IHFHIQ*SAPAPHREQFCTGR*SR*KDKDH 337
           R           G+  H  C +G  G +C      + +  + HR + C  R    K +  
Sbjct: 77  RFKRVLQNLLDKGMIMHVTCCKGASGSLCLCK---ERALKSNHRAKRCQDRQKSQKPQKP 133

Query: 338 GDRRNNPCRL 367
           G R + PC+L
Sbjct: 134 GQRESEPCQL 143



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>SNX23_HUMAN (Q96L93) Kinesin-like motor protein C20orf23 (Sorting nexin 23)|
          Length = 1317

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
 Frame = +3

Query: 120 RFSTHIKTTPYLKELQRHLTVRLGEASDAM-------SNAYKALLDAFVESTFTFSDQLL 278
           R   H K  PY+++L +HL    G+  + M       + A   + D    S   F+ +  
Sbjct: 173 RVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFT 232

Query: 279 RPTESNFAPVDEVGERIKIMEIEGTIPADF--PEGVYIRNGSN 401
           +    +  P + V  +I ++++ G+  AD     GV ++ G N
Sbjct: 233 QAKFDSEMPCETV-SKIHLVDLAGSERADATGATGVRLKEGGN 274



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>DCS2_GOSAR (Q39760) (+)-delta-cadinene synthase isozyme XC14 (EC 4.2.3.13)|
           (D-cadinene synthase)
          Length = 554

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 123 FSTHIKTTPYLKELQRHLTVRLGEASDAMSNAYKALLDAFVE 248
           ++T+ +  PY K ++R     + E  + M  +YKALLD + E
Sbjct: 313 YATYEELIPYTKAIERWDIKCIDELPEYMKPSYKALLDVYEE 354



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>LPHN2_MOUSE (Q8JZZ7) Latrophilin-2 (Calcium-independent alpha-latrotoxin|
           receptor 2) (Fragment)
          Length = 891

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI-PADFPE 374
           S   ++    LLD   E  F  +D LL PT  +  P + +   + ++  EG +    FP 
Sbjct: 105 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTENIVLEVAVLSTEGQVQDFKFPL 163

Query: 375 GV 380
           G+
Sbjct: 164 GL 165



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>HIOM_CHICK (Q92056) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)|
           (Acetylserotonin O-methyltransferase) (ASMT)
          Length = 346

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = -1

Query: 425 RVQGSEQRVRTISNIDTLWKVCRDCSFYLHDLYPFTDFIDRCKIALGGAQELITECESGF 246
           R +  E+ ++ ++  +++W +C        DL PFT   D      GG   L  EC   +
Sbjct: 147 RYRSEEEMLKFLAGQNSIWSICGRDVLTAFDLSPFTQIYD----LGGGGGALAQECVFLY 202

Query: 245 NKC 237
             C
Sbjct: 203 PNC 205



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>LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independent|
           alpha-latrotoxin receptor 2)
          Length = 1478

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI-PADFPE 374
           S   ++    LLD   E  F  +D L+ PT  +  P + +   + ++  EG +    FP 
Sbjct: 634 SSEQAHTATMLLDTLEEGAFVLADNLVEPTRVSM-PTENIVLEVAVLSTEGQVQDFKFPL 692

Query: 375 GV 380
           G+
Sbjct: 693 GI 694



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>INS_PROGU (P01331) Insulin [Contains: Insulin B chain; Insulin A chain]|
          Length = 50

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -1

Query: 407 QRVRTISNIDTLWKVCRDCSFYLHDLYPFTDFIDRCKIALGGAQELITEC 258
           QR+     +DTL+ VC+   FY     P    +D+C   +    +L+T C
Sbjct: 4   QRLCGSQLVDTLYSVCKHRGFY----RPSEGIVDQCCTNICSRNQLLTYC 49



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>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL|
           receptor) (Scavenger receptor class F member 1)
          Length = 830

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 134 HQNHAISEGASATSYRQTWRGVRCHEQCLQGTPGCIC 244
           H      +  S  S    W G +C + CL GT G  C
Sbjct: 270 HNEPCSPDTGSCESCEPGWNGTQCQQPCLPGTFGESC 306



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>HISX_SYMTH (Q67KH6) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 439

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +3

Query: 192 EASDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDE-VGERIKIMEIEGTIPADF 368
           EA  A+S A++A L   VE+   F    +  +     P    VG+R+         P D 
Sbjct: 70  EAEAAVSAAFRAALQVAVENIAAFHRPQVPTSWFTTRPDGTIVGQRVT--------PVD- 120

Query: 369 PEGVYIRNGSNPLFGAL 419
             GVY+  GS PLF  L
Sbjct: 121 RAGVYVPGGSAPLFSCL 137



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>DCDA_METTH (O27390) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 428

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
 Frame = +3

Query: 189 GEASDAMS--NAYKALLDAFVESTFTFSDQLLRPTESNFA-------PVDEVGERIKIME 341
           G   DA+S    Y AL+  F      ++   +R  E  FA        VD   + +++ E
Sbjct: 79  GSGIDAVSPGEIYTALMAGFDPDRILYTGNNVRDDELQFALDSGVRINVDSRSQLLRLSE 138

Query: 342 IEGTIPADFPEGVYIRNGSNPLFGALH 422
           I        PEG+ I    NPL GA H
Sbjct: 139 IA-------PEGLRISFRVNPLVGAGH 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,550,311
Number of Sequences: 219361
Number of extensions: 1136875
Number of successful extensions: 2749
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2749
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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