Clone Name | basd2o15 |
---|---|
Clone Library Name | barley_pub |
>LPHN2_HUMAN (O95490) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (Latrophilin homolog 1) (Lectomedin-1) Length = 1459 Score = 30.4 bits (67), Expect = 1.8 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +3 Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI-PADFPE 374 S ++ LLD E F +D LL PT + P + + + ++ EG I FP Sbjct: 630 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTENIVLEVAVLSTEGQIQDFKFPL 688 Query: 375 GV 380 G+ Sbjct: 689 GI 690
>LPHN2_RAT (O88923) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) (CIRL-2) Length = 1487 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +3 Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI 356 S ++ LLD E F +D LL PT + P D + + ++ EG + Sbjct: 634 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTDNIVLEVAVLSTEGQV 685
>HILS1_MOUSE (Q9QYL0) Spermatid-specific linker histone H1-like protein (TISP64)| Length = 170 Score = 30.0 bits (66), Expect = 2.4 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 19/130 (14%) Frame = +2 Query: 35 PPISSPATHLXXXXXXXKKPTHHTA*CDSLLYAHQNHAIS-----EGASATSYRQT---W 190 P S T +KPT +L ++ +S + S T Y T W Sbjct: 17 PSQSESQTESDISTQSLRKPTMSYVILKTLADKRVHNCVSLATLKKAVSITGYNMTHNTW 76 Query: 191 R-----------GVRCHEQCLQGTPGCIC*IHFHIQ*SAPAPHREQFCTGR*SR*KDKDH 337 R G+ H C +G G +C + + + HR + C R K + Sbjct: 77 RFKRVLQNLLDKGMIMHVTCCKGASGSLCLCK---ERALKSNHRAKRCQDRQKSQKPQKP 133 Query: 338 GDRRNNPCRL 367 G R + PC+L Sbjct: 134 GQRESEPCQL 143
>SNX23_HUMAN (Q96L93) Kinesin-like motor protein C20orf23 (Sorting nexin 23)| Length = 1317 Score = 30.0 bits (66), Expect = 2.4 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 9/103 (8%) Frame = +3 Query: 120 RFSTHIKTTPYLKELQRHLTVRLGEASDAM-------SNAYKALLDAFVESTFTFSDQLL 278 R H K PY+++L +HL G+ + M + A + D S F+ + Sbjct: 173 RVREHPKEGPYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTIKFT 232 Query: 279 RPTESNFAPVDEVGERIKIMEIEGTIPADF--PEGVYIRNGSN 401 + + P + V +I ++++ G+ AD GV ++ G N Sbjct: 233 QAKFDSEMPCETV-SKIHLVDLAGSERADATGATGVRLKEGGN 274
>DCS2_GOSAR (Q39760) (+)-delta-cadinene synthase isozyme XC14 (EC 4.2.3.13)| (D-cadinene synthase) Length = 554 Score = 29.6 bits (65), Expect = 3.1 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 123 FSTHIKTTPYLKELQRHLTVRLGEASDAMSNAYKALLDAFVE 248 ++T+ + PY K ++R + E + M +YKALLD + E Sbjct: 313 YATYEELIPYTKAIERWDIKCIDELPEYMKPSYKALLDVYEE 354
>LPHN2_MOUSE (Q8JZZ7) Latrophilin-2 (Calcium-independent alpha-latrotoxin| receptor 2) (Fragment) Length = 891 Score = 29.3 bits (64), Expect = 4.0 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +3 Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI-PADFPE 374 S ++ LLD E F +D LL PT + P + + + ++ EG + FP Sbjct: 105 SSEQAHTATMLLDTLEEGAFVLADNLLEPTRVSM-PTENIVLEVAVLSTEGQVQDFKFPL 163 Query: 375 GV 380 G+ Sbjct: 164 GL 165
>HIOM_CHICK (Q92056) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)| (Acetylserotonin O-methyltransferase) (ASMT) Length = 346 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/63 (25%), Positives = 27/63 (42%) Frame = -1 Query: 425 RVQGSEQRVRTISNIDTLWKVCRDCSFYLHDLYPFTDFIDRCKIALGGAQELITECESGF 246 R + E+ ++ ++ +++W +C DL PFT D GG L EC + Sbjct: 147 RYRSEEEMLKFLAGQNSIWSICGRDVLTAFDLSPFTQIYD----LGGGGGALAQECVFLY 202 Query: 245 NKC 237 C Sbjct: 203 PNC 205
>LPHN2_BOVIN (O97817) Latrophilin-2 precursor (Calcium-independent| alpha-latrotoxin receptor 2) Length = 1478 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +3 Query: 198 SDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDEVGERIKIMEIEGTI-PADFPE 374 S ++ LLD E F +D L+ PT + P + + + ++ EG + FP Sbjct: 634 SSEQAHTATMLLDTLEEGAFVLADNLVEPTRVSM-PTENIVLEVAVLSTEGQVQDFKFPL 692 Query: 375 GV 380 G+ Sbjct: 693 GI 694
>INS_PROGU (P01331) Insulin [Contains: Insulin B chain; Insulin A chain]| Length = 50 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = -1 Query: 407 QRVRTISNIDTLWKVCRDCSFYLHDLYPFTDFIDRCKIALGGAQELITEC 258 QR+ +DTL+ VC+ FY P +D+C + +L+T C Sbjct: 4 QRLCGSQLVDTLYSVCKHRGFY----RPSEGIVDQCCTNICSRNQLLTYC 49
>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL| receptor) (Scavenger receptor class F member 1) Length = 830 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/37 (32%), Positives = 15/37 (40%) Frame = +2 Query: 134 HQNHAISEGASATSYRQTWRGVRCHEQCLQGTPGCIC 244 H + S S W G +C + CL GT G C Sbjct: 270 HNEPCSPDTGSCESCEPGWNGTQCQQPCLPGTFGESC 306
>HISX_SYMTH (Q67KH6) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 439 Score = 28.1 bits (61), Expect = 9.0 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = +3 Query: 192 EASDAMSNAYKALLDAFVESTFTFSDQLLRPTESNFAPVDE-VGERIKIMEIEGTIPADF 368 EA A+S A++A L VE+ F + + P VG+R+ P D Sbjct: 70 EAEAAVSAAFRAALQVAVENIAAFHRPQVPTSWFTTRPDGTIVGQRVT--------PVD- 120 Query: 369 PEGVYIRNGSNPLFGAL 419 GVY+ GS PLF L Sbjct: 121 RAGVYVPGGSAPLFSCL 137
>DCDA_METTH (O27390) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 428 Score = 28.1 bits (61), Expect = 9.0 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 9/87 (10%) Frame = +3 Query: 189 GEASDAMS--NAYKALLDAFVESTFTFSDQLLRPTESNFA-------PVDEVGERIKIME 341 G DA+S Y AL+ F ++ +R E FA VD + +++ E Sbjct: 79 GSGIDAVSPGEIYTALMAGFDPDRILYTGNNVRDDELQFALDSGVRINVDSRSQLLRLSE 138 Query: 342 IEGTIPADFPEGVYIRNGSNPLFGALH 422 I PEG+ I NPL GA H Sbjct: 139 IA-------PEGLRISFRVNPLVGAGH 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,550,311 Number of Sequences: 219361 Number of extensions: 1136875 Number of successful extensions: 2749 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2690 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2749 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)