Clone Name | basd3d14 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1106 bits (558), Expect = 0.0 Identities = 560/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119542 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 119483 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 119423 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 119363 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119362 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 119303 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119302 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 119243 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119242 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 119183 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119182 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 119123 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119122 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 119063 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119062 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 119003 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 119002 aggtgggggtgcaaagacagc 118982 Score = 1106 bits (558), Expect = 0.0 Identities = 560/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95352 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 95411 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95412 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 95471 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95472 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 95531 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95532 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 95591 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95592 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 95651 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95652 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 95711 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95712 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 95771 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95772 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 95831 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95832 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 95891 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 95892 aggtgggggtgcaaagacagc 95912
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118323 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 118264 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118263 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 118204 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118203 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 118144 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118143 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 118084 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118083 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 118024 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118023 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 117964 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117963 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 117904 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117903 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 117844 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117843 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 117784 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 117783 aggtgggggtgcaaagacagc 117763
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119407 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 119348 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119347 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 119288 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119287 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 119228 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119227 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 119168 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119167 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 119108 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119107 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 119048 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119047 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 118988 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118987 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 118928 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118927 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 118868 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 118867 aggtgggggtgcaaagacagc 118847 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95749 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 95808 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95809 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 95868 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95869 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 95928 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95929 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 95988 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95989 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 96048 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96049 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 96108 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96109 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 96168 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96169 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 96228 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96229 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 96288 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 96289 aggtgggggtgcaaagacagc 96309
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119407 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 119348 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119347 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 119288 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119287 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 119228 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119227 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 119168 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119167 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 119108 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119107 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 119048 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119047 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 118988 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118987 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 118928 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118927 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 118868 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 118867 aggtgggggtgcaaagacagc 118847 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95749 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 95808 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95809 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 95868 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95869 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 95928 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95929 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 95988 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95989 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 96048 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96049 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 96108 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96109 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 96168 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96169 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 96228 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96229 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 96288 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 96289 aggtgggggtgcaaagacagc 96309
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119356 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 119297 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119296 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 119237 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119236 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 119177 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119176 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 119117 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119116 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 119057 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119056 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 118997 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118996 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 118937 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118936 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 118877 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118876 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 118817 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 118816 aggtgggggtgcaaagacagc 118796 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95694 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 95753 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95754 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 95813 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95814 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 95873 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95874 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 95933 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95934 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 95993 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95994 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 96053 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96054 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 96113 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96114 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 96173 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96174 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 96233 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 96234 aggtgggggtgcaaagacagc 96254
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508327 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 31508386 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508387 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 31508446 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508447 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 31508506 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508507 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 31508566 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508567 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 31508626 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508627 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 31508686 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508687 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 31508746 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508747 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 31508806 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508807 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 31508866 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 31508867 aggtgggggtgcaaagacagc 31508887 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 460 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 520 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 11513215 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 476 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 535 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 536 taaaggaggtggggg 550 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 479 gtcgagagggaaacagcccggatcaccagctaaggccc 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 378 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 432 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84269 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 84210 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84209 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 84150 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84149 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 84090 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84089 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 84030 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84029 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 83970 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83969 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 83910 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83909 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 83850 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83849 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 83790 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83789 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 83730 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 83729 aggtgggggtgcaaagacagc 83709
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119376 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 119317 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119316 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 119257 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119256 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 119197 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119196 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 119137 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119136 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 119077 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119076 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 119017 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119016 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 118957 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118956 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 118897 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118896 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 118837 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 118836 aggtgggggtgcaaagacagc 118816 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95742 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 95801 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95802 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 95861 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95862 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 95921 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95922 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 95981 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95982 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 96041 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96042 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 96101 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96102 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 96161 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96162 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 96221 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96222 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 96281 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 96282 aggtgggggtgcaaagacagc 96302
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14516 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 14575 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14576 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 14635 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14636 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 14695 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14696 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 14755 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14756 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 14815 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14816 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 14875 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14876 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 14935 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14936 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 14995 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14996 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 15055 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 15056 aggtgggggtgcaaagacagc 15076 Score = 1074 bits (542), Expect = 0.0 Identities = 557/561 (99%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122791 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 122850 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122851 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 122910 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 122911 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-taggtgatct 122969 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122970 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 123029 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123030 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 123089 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123090 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 123149 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123150 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 123209 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123210 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 123269 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123270 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 123329 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 123330 aggtgggggtgcaaagacagc 123350
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141324 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 141383 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141384 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 141443 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141444 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 141503 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141504 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 141563 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141564 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 141623 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141624 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 141683 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141684 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 141743 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141744 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 141803 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141804 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 141863 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 141864 aggtgggggtgcaaagacagc 141884
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93920 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 93979 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93980 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 94039 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94040 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 94099 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94100 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 94159 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94160 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 94219 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94220 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 94279 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94280 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 94339 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94340 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 94399 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94400 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 94459 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 94460 aggtgggggtgcaaagacagc 94480
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58095 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 58036 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58035 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 57976 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57975 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 57916 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57915 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 57856 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57855 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 57796 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57795 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 57736 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57735 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 57676 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57675 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 57616 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57615 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 57556 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 57555 aggtgggggtgcaaagacagc 57535
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27984 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 28043 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28044 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 28103 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28104 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 28163 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28164 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 28223 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28224 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 28283 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28284 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 28343 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28344 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 28403 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28404 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 28463 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28464 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 28523 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 28524 aggtgggggtgcaaagacagc 28544
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268676 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 9268735 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268736 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 9268795 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268796 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 9268855 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268856 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 9268915 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268916 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 9268975 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268976 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 9269035 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269036 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 9269095 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269096 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 9269155 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269156 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 9269215 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 9269216 aggtgggggtgcaaagacagc 9269236 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056590 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 9056649 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056650 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 9056709 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056710 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 9056769 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056770 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 9056829 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056830 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 9056889 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056890 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 9056949 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056950 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 9057009 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057010 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 9057069 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057070 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 9057129 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 9057130 aggtgggggtgcaaagacagc 9057150 Score = 1090 bits (550), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228176 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 9228235 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228236 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 9228295 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9228296 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctaggtgatct 9228355 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228356 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 9228415 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228416 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 9228475 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228476 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 9228535 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 9228595 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228596 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 9228655 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228656 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 9228715 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 9228716 aggtgggggtgcaaagacagc 9228736 Score = 1074 bits (542), Expect = 0.0 Identities = 557/561 (99%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164765 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 9164824 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164825 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 9164884 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 9164885 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-taggtgatct 9164943 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164944 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 9165003 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165004 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 9165063 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165064 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 9165123 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165124 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 9165183 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165184 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 9165243 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165244 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 9165303 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 9165304 aggtgggggtgcaaagacagc 9165324 Score = 44.1 bits (22), Expect = 0.49 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggagggga 30 ||||||||||||||| |||||| |||||| Sbjct: 25171435 gtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938661 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 19938720 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938721 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 19938780 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938781 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 19938840 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938841 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 19938900 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938901 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 19938960 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938961 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 19939020 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939021 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 19939080 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939081 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 19939140 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939141 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 19939200 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 19939201 aggtgggggtgcaaagacagc 19939221 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387528 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 10387587 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387588 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 10387647 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387648 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 10387707 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387708 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 10387767 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387768 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 10387827 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387828 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 10387887 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387888 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 10387947 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387948 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 10388007 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388008 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 10388067 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 10388068 aggtgggggtgcaaagacagc 10388088 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276770 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 10276711 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276710 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 10276651 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276650 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 10276591 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276590 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 10276531 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276530 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 10276471 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276470 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 10276411 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276410 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 10276351 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276350 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 10276291 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276290 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 10276231 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 10276230 aggtgggggtgcaaagacagc 10276210 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 385 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 444 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 445 tcggccagtgagacgatgggggataagcttcatcgtcgagag 486 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598843 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 31598902 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598903 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 31598962 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598963 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 31599022 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599023 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 31599082 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599083 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 31599142 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599143 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 31599202 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599203 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 31599262 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599263 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 31599322 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599323 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 31599382 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 31599383 aggtgggggtgcaaagacagc 31599403 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 460 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 520 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 11509978 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 476 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 535 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 536 taaaggaggtggggg 550 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 479 gtcgagagggaaacagcccggatcaccagctaaggccc 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 378 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 432 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526159 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 33526218 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526219 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 33526278 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526279 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 33526338 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526339 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 33526398 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526399 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 33526458 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526459 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 33526518 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526519 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 33526578 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526579 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 33526638 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526639 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 33526698 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 33526699 aggtgggggtgcaaagacagc 33526719 Score = 232 bits (117), Expect = 1e-57 Identities = 119/120 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678045 gtgctgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 16677986 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677985 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 469 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 528 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 529 tcagtgataaaggaggtgggggtgcaaagac 559 ||||||||||||||||||||||||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac 527841 Score = 129 bits (65), Expect = 1e-26 Identities = 67/68 (98%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744730 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 32744671 Query: 62 atgagccg 69 |||||||| Sbjct: 32744670 atgagccg 32744663
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47382 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 47323 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47322 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 47263 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47262 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 47203 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47202 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 47143 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47142 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 47083 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47082 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 47023 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47022 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 46963 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46962 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 46903 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46902 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 46843 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 46842 aggtgggggtgcaaagacagc 46822
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71356 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 71415 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71416 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 71475 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71476 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 71535 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71536 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 71595 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71596 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 71655 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71656 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 71715 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71716 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 71775 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71776 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 71835 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71836 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 71895 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 71896 aggtgggggtgcaaagacagc 71916
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 187 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 247 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 307 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 367 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 427 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 487 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 547 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 607 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 608 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 667 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 668 aggtgggggtgcaaagacagc 688
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 382 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 442 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 502 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 562 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 622 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 682 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 742 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 802 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 862 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 863 aggtgggggtgcaaagacagc 883
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 253 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 313 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 373 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 433 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 493 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 553 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 613 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 673 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 733 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 734 aggtgggggtgcaaagacagc 754
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 384 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 444 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 504 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 564 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 624 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 684 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 744 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 804 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 864 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 865 aggtgggggtgcaaagacagc 885
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 203 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 263 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 323 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 383 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 443 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 503 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 563 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 623 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 683 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 684 aggtgggggtgcaaagacagc 704
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 382 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 442 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 502 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 562 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 622 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 682 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 742 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 802 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 862 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 863 aggtgggggtgcaaagacagc 883
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 384 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 444 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 504 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 564 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 624 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 684 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 744 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 804 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 864 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 865 aggtgggggtgcaaagacagc 885
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949937 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 19949996 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949997 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 19950056 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950057 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 19950116 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950117 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 19950176 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950177 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 19950236 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950237 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 19950296 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950297 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 19950356 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950357 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 19950416 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950417 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 19950476 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 19950477 aggtgggggtgcaaagacagc 19950497 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393567 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 10393626 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393627 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 10393686 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393687 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 10393746 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393747 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 10393806 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393807 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 10393866 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393867 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 10393926 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393927 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 10393986 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393987 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 10394046 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394047 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 10394106 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 10394107 aggtgggggtgcaaagacagc 10394127 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282809 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 10282750 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282749 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 10282690 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282689 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 10282630 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282629 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 10282570 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282569 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 10282510 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282509 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 10282450 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282449 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 10282390 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282389 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 10282330 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282329 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 10282270 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 10282269 aggtgggggtgcaaagacagc 10282249 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 385 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 444 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 445 tcggccagtgagacgatgggggataagcttcatcgtcgagag 486 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119350 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 119291 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119290 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 119231 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119230 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 119171 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119170 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 119111 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119110 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 119051 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119050 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 118991 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118990 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 118931 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118930 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 118871 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118870 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 118811 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 118810 aggtgggggtgcaaagacagc 118790 Score = 1098 bits (554), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95689 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 95748 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95749 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 95808 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95809 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 95868 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95869 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 95928 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95929 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 95988 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95989 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 96048 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96049 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 96108 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96109 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 96168 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96169 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 96228 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 96229 aggtgggggtgcaaagacagc 96249
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1090 bits (550), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20751 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 20810 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 20811 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 20870 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20871 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 20930 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20931 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 20990 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20991 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 21050 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21051 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 21110 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21111 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 21170 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21171 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 21230 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21231 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 21290 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 21291 aggtgggggtgcaaagacagc 21311 Score = 1053 bits (531), Expect = 0.0 Identities = 555/562 (98%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44367 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 44308 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 44307 atgagccggcgactcataggcagtggcttggttaagggaatggaaccctccggagccgta 44248 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44247 gtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 44188 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44187 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 44128 Query: 242 aagaatcagcggatgagttgtggttaggggtg-aaatgccactcgaacccagagctagct 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 44127 aagaatcagcggatgagttgtggttaggggtgtaaatgccactcgaacccagagctagtt 44068 Query: 301 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcact 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44067 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcact 44008 Query: 361 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44007 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 43948 Query: 421 acccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43947 acccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 43888 Query: 481 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43887 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 43828 Query: 541 gaggtgggggtgcaaagacagc 562 |||||||||||||||||||||| Sbjct: 43827 gaggtgggggtgcaaagacagc 43806
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1090 bits (550), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 937 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 936 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 877 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 817 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 757 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 697 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 637 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 577 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 517 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 457 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 456 aggtgggggtgcaaagacagc 436
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1090 bits (550), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123206 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 123147 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123146 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 123087 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123086 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 123027 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123026 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 122967 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122966 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 122907 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122906 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 122847 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122846 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 122787 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122786 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 122727 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122726 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 122667 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 122666 aggtgggggtgcaaagacagc 122646 Score = 1090 bits (550), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99631 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 99690 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 99691 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 99750 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99751 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 99810 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99811 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 99870 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99871 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 99930 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99931 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 99990 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99991 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 100050 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100051 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 100110 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100111 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 100170 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 100171 aggtgggggtgcaaagacagc 100191
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1090 bits (550), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123923 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 123864 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123863 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 123804 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123803 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 123744 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123743 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 123684 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123683 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 123624 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123623 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 123564 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123563 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 123504 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123503 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 123444 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123443 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 123384 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 123383 aggtgggggtgcaaagacagc 123363 Score = 1090 bits (550), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100308 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 100367 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 100368 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 100427 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100428 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 100487 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100488 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 100547 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100548 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 100607 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100608 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 100667 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100668 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 100727 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100728 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 100787 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100788 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 100847 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 100848 aggtgggggtgcaaagacagc 100868
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1082 bits (546), Expect = 0.0 Identities = 557/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241605 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 9241546 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241545 atgagctggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 9241486 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241485 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 9241426 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9241425 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttg 9241366 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241365 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 9241306 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241305 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 9241246 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 9241186 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241185 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 9241126 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241125 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 9241066 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 9241065 aggtgggggtgcaaagacagc 9241045 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 350 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 409 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 410 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 469 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 470 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 515 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 504 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 550 ||||||||| || ||||||||||||| ||| ||||| |||||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtggggg 3580339 Score = 40.1 bits (20), Expect = 7.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 503 accagctaaggcccctaaatgaccgctcagtgataaagga 542 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1082 bits (546), Expect = 0.0 Identities = 557/561 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52818 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 52759 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52758 atgagctggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 52699 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52698 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 52639 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 52638 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttg 52579 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52578 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 52519 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52518 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 52459 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52458 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 52399 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52398 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 52339 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52338 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 52279 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 52278 aggtgggggtgcaaagacagc 52258
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1082 bits (546), Expect = 0.0 Identities = 557/561 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 381 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 441 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 501 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 502 atccatgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgactgatgttg 561 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 621 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 681 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 741 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 801 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 802 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgatagagg 861 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 862 aggtgggggtgcaaagacagc 882
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1068 bits (539), Expect = 0.0 Identities = 547/550 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 494 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 554 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 614 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 674 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 734 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 794 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 854 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 914 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 974 Query: 542 aggtgggggt 551 |||| ||||| Sbjct: 975 aggtaggggt 984
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1067 bits (538), Expect = 0.0 Identities = 556/561 (99%), Gaps = 1/561 (0%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123146 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 123087 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123086 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 123027 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123026 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 122967 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122966 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 122907 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122906 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 122847 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122846 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 122787 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122786 tttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 122728 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122727 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 122668 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122667 gagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaagg 122608 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 122607 aggtgggggtgcaaagacagc 122587 Score = 1067 bits (538), Expect = 0.0 Identities = 556/561 (99%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99591 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 99650 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 99651 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 99710 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99711 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 99770 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99771 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 99830 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99831 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 99890 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99891 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 99950 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99951 tttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 100009 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100010 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 100069 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100070 gagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaagg 100129 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 100130 aggtgggggtgcaaagacagc 100150
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1067 bits (538), Expect = 0.0 Identities = 556/561 (99%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5944 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 6003 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 6004 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 6063 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6064 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 6123 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6124 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 6183 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6184 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 6243 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6244 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 6303 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6304 tttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 6362 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6363 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 6422 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 6423 gagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaagg 6482 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 6483 aggtgggggtgcaaagacagc 6503
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1067 bits (538), Expect = 0.0 Identities = 556/561 (99%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 591 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 592 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 651 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 711 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 771 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 831 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 891 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 tttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 950 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 951 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 1010 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1011 gagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaagg 1070 Query: 542 aggtgggggtgcaaagacagc 562 ||||||||||||||||||||| Sbjct: 1071 aggtgggggtgcaaagacagc 1091
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1035 bits (522), Expect = 0.0 Identities = 527/529 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 379 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 439 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 499 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 559 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 619 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 679 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 739 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 799 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 530 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1009 bits (509), Expect = 0.0 Identities = 550/563 (97%), Gaps = 2/563 (0%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122688 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 122629 Query: 62 atgagccggcgactcataggcagtg--gcttggttaagggaacggaacccaccggagccg 119 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 122628 atgagccggtgactcataggcagtgtggcttggttaagggaacggaacccaccggagccg 122569 Query: 120 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 179 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122568 tagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgat 122509 Query: 180 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122508 ctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgactgatgt 122449 Query: 240 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122448 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 122389 Query: 300 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122388 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 122329 Query: 360 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122328 tgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatat 122269 Query: 420 gacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcg 479 ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 122268 gacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagcttcatcg 122209 Query: 480 tcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaa 539 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122208 tcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaa 122149 Query: 540 ggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||| Sbjct: 122148 ggaggtgggggtgcaaagacagc 122126
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1009 bits (509), Expect = 0.0 Identities = 550/563 (97%), Gaps = 2/563 (0%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825229 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 12825170 Query: 62 atgagccggcgactcataggcagtg--gcttggttaagggaacggaacccaccggagccg 119 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12825169 atgagccggtgactcataggcagtgtggcttggttaagggaacggaacccaccggagccg 12825110 Query: 120 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 179 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825109 tagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgat 12825050 Query: 180 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825049 ctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgactgatgt 12824990 Query: 240 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824989 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 12824930 Query: 300 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824929 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 12824870 Query: 360 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 12824869 tgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatat 12824810 Query: 420 gacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcg 479 ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 12824809 gacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagcttcatcg 12824750 Query: 480 tcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaa 539 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12824749 tcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaa 12824690 Query: 540 ggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||| Sbjct: 12824689 ggaggtgggggtgcaaagacagc 12824667
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1007 bits (508), Expect = 0.0 Identities = 513/515 (99%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 587 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 647 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 707 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 767 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 827 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 887 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 947 Query: 422 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 948 cccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 1007 Query: 482 gagagggaaacagcccggatcaccagctaaggccc 516 ||||||||||||||||||||||||||||||||||| Sbjct: 1008 gagagggaaacagcccggatcaccagctaaggccc 1042
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 993 bits (501), Expect = 0.0 Identities = 504/505 (99%) Strand = Plus / Plus Query: 58 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 118 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 177 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 178 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 238 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 298 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 358 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 418 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 478 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 538 aaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||| Sbjct: 482 aaggaggtgggggtgcaaagacagc 506
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 991 bits (500), Expect = 0.0 Identities = 503/504 (99%) Strand = Plus / Plus Query: 59 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 119 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 178 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 179 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 239 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 299 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 359 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 419 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 479 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 539 aggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||| Sbjct: 481 aggaggtgggggtgcaaagacagc 504
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 948 bits (478), Expect = 0.0 Identities = 537/557 (96%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 141578 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 141519 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 141518 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 141464 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141463 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 141404 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 141403 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 141344 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141343 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 141284 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141283 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 141224 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 425 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141223 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 141164 Query: 426 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141163 aaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 141104 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141103 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 141044 Query: 546 gggggtgcaaagacagc 562 |||||||| ||||||| Sbjct: 141043 aggggtgcagagacagc 141027 Score = 948 bits (478), Expect = 0.0 Identities = 537/557 (96%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 112079 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 112138 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112139 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 112193 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112194 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 112253 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 112254 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 112313 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112314 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 112373 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112374 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 112433 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 425 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112434 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 112493 Query: 426 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112494 aaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 112553 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112554 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 112613 Query: 546 gggggtgcaaagacagc 562 |||||||| ||||||| Sbjct: 112614 aggggtgcagagacagc 112630
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 944 bits (476), Expect = 0.0 Identities = 536/555 (96%), Gaps = 6/555 (1%) Strand = Plus / Minus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 133691 agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagc 133632 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133631 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 133577 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133576 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 133517 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 133516 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 133457 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133456 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 133397 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 367 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133396 cccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcgg 133337 Query: 368 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 427 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133336 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 133277 Query: 428 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 487 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133276 aatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 133218 Query: 488 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133217 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtag 133158 Query: 548 gggtgcaaagacagc 562 ||||||| ||||||| Sbjct: 133157 gggtgcagagacagc 133143 Score = 944 bits (476), Expect = 0.0 Identities = 536/555 (96%), Gaps = 6/555 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104280 agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagc 104339 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104340 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 104394 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104395 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 104454 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 104455 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 104514 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104515 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 104574 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 367 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104575 cccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcgg 104634 Query: 368 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 427 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104635 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 104694 Query: 428 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 487 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104695 aatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 104753 Query: 488 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104754 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtag 104813 Query: 548 gggtgcaaagacagc 562 ||||||| ||||||| Sbjct: 104814 gggtgcagagacagc 104828
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 922 bits (465), Expect = 0.0 Identities = 534/557 (95%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 127334 tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatga 127275 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 127274 gccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcga 127220 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127219 aagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 127160 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 127159 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 127100 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127099 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 127040 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127039 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 126980 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 425 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126979 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 126920 Query: 426 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126919 a----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 126864 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126863 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 126804 Query: 546 gggggtgcaaagacagc 562 |||||||| ||||||| Sbjct: 126803 aggggtgcagagacagc 126787 Score = 922 bits (465), Expect = 0.0 Identities = 534/557 (95%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 107588 tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatga 107647 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 107648 gccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcga 107702 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107703 aagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 107762 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 107763 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 107822 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107823 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 107882 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107883 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 107942 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 425 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107943 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 108002 Query: 426 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108003 a----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 108058 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108059 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 108118 Query: 546 gggggtgcaaagacagc 562 |||||||| ||||||| Sbjct: 108119 aggggtgcagagacagc 108135
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 918 bits (463), Expect = 0.0 Identities = 537/562 (95%), Gaps = 10/562 (1%) Strand = Plus / Minus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 139056 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 138997 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 138996 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcga 138942 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138941 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 138882 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 138881 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 138822 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138821 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 138762 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138761 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 138702 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc- 424 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138701 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 138642 Query: 425 ----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138641 aaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 138582 Query: 481 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138581 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 138522 Query: 541 gaggtgggggtgcaaagacagc 562 ||||| |||||||| ||||||| Sbjct: 138521 gaggtaggggtgcagagacagc 138500 Score = 918 bits (463), Expect = 0.0 Identities = 537/562 (95%), Gaps = 10/562 (1%) Strand = Plus / Plus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 110889 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 110948 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 110949 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcga 111003 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111004 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 111063 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 111064 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 111123 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111124 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 111183 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111184 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 111243 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc- 424 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111244 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 111303 Query: 425 ----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111304 aaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 111363 Query: 481 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111364 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 111423 Query: 541 gaggtgggggtgcaaagacagc 562 ||||| |||||||| ||||||| Sbjct: 111424 gaggtaggggtgcagagacagc 111445
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130632 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130631 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130587 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104003 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104004 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104048
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1036 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1037 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1081
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138469 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138468 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138424 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110628 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110629 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110673
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131740 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131739 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131695 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105138 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105139 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105183
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 136317 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 136263 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 136203 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 136143 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136142 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 136083 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 136082 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 136023 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 136022 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135963 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135962 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135903 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135902 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135858 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107240 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107294 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107295 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107354 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107355 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107414 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107474 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107475 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107534 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107535 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107594 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107595 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107654 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107655 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107699
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 142258 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 142204 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 142144 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 142084 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142083 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 142024 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 142023 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 141964 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141963 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 141904 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141903 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 141844 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 141843 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagc 141799 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111070 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 111124 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 111184 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 111244 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111245 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 111304 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 111305 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 111364 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 111365 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 111424 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111425 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 111484 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 111485 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagc 111529
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134925 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134871 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134870 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134811 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134810 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134751 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134691 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134690 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134631 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134630 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134571 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134570 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134511 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134510 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134466 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106111 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106165 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106225 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106285 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106345 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106346 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106405 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106406 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106465 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106525 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106526 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106570
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135971 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135917 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135916 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135857 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135797 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135737 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135736 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135677 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135676 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135617 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135557 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135556 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135512 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106454 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106508 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106509 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106568 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106628 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106688 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106689 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106748 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106749 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106808 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106809 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106868 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106869 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106913
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135060 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135006 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135005 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134946 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134886 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134885 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134826 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134825 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134766 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134765 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134706 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134705 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134646 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134645 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134601 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106283 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106337 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106338 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106397 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106457 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106517 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106518 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106577 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106578 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106637 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106638 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106697 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106698 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106742
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135058 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135004 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134944 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134884 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134824 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134823 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134764 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134763 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134704 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134703 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134644 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134643 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134599 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106334 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106335 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106394 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106454 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106514 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106515 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106574 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106575 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106634 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106635 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106694 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106695 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106739
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134970 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134916 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134856 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134796 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134736 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134735 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134676 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134675 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134616 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134615 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134556 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134555 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134511 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106158 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106212 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106213 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106272 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106332 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106333 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106392 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106393 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106452 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106453 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106512 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106572 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106573 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106617
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131733 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131732 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131688 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105136 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105137 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105181
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 902 bits (455), Expect = 0.0 Identities = 506/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 100 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 159 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 160 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 219 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 220 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 280 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 340 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 400 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 459 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 460 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 130754 Query: 520 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130753 aatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130711 Score = 902 bits (455), Expect = 0.0 Identities = 506/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 100 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 159 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 160 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 219 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 220 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 280 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 340 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 400 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 459 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 460 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102691 Query: 520 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102692 aatgaccgctcagtgataaaggaggtaggggtgcagagacagc 102734
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135679 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135625 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135624 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135565 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135564 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135505 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135504 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135445 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135444 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135385 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135384 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135325 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135324 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135265 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 135264 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 135220 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106951 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107005 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107065 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107066 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107125 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107126 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107185 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107186 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107245 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107246 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107305 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107306 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107365 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107366 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107410
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134866 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134865 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134821 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107040 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107041 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107085
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2145 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2199 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2200 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2259 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 2319 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 2379 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2380 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 2439 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 2440 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 2499 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 2559 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 2560 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 2604
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135145 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135144 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135100 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107262 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107263 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107307
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135677 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135623 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135563 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135562 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135503 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135443 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135442 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135383 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135382 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135323 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135322 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135263 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 135262 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 135218 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106949 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107003 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107004 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107063 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107123 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107183 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107184 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107243 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107244 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107303 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107363 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107364 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107408
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135408 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135354 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135353 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135294 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135234 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135174 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135173 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135114 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135054 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135053 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134994 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 134993 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 134949 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106730 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106784 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106785 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106844 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106904 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106905 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106964 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106965 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107024 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107025 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107084 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107085 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107144 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107145 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107189
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138674 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138673 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138629 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110625 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110626 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110670
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1132 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1133 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 1177
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134937 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134883 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134823 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134763 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134762 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134703 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134702 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134643 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134642 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134583 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134582 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134523 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134522 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134478 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106125 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106179 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106180 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106239 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106299 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106359 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106360 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106419 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106420 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106479 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106539 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106540 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106584
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1034 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1035 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1079
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131963 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 131962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 131918 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104801 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104802 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104846
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 132924 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 132923 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 132879 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105725 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 105726 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 105770
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 878 bits (443), Expect = 0.0 Identities = 528/557 (94%), Gaps = 16/557 (2%) Strand = Plus / Minus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 134451 tgagctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatga 134396 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134395 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 134341 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134340 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 134281 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 134280 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 134221 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134220 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 134161 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134160 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 134101 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 425 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134100 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccc 134041 Query: 426 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134040 aaa-------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 133988 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133987 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 133928 Query: 546 gggggtgcaaagacagc 562 |||||||| ||||||| Sbjct: 133927 aggggtgcagagacagc 133911 Score = 878 bits (443), Expect = 0.0 Identities = 528/557 (94%), Gaps = 16/557 (2%) Strand = Plus / Plus Query: 6 tgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 65 ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 105831 tgagctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatga 105886 Query: 66 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 125 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 105887 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 105941 Query: 126 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 185 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105942 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 106001 Query: 186 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 245 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 106002 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 106061 Query: 246 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106062 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 106121 Query: 306 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106122 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 106181 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 425 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106182 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccc 106241 Query: 426 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106242 aaa-------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 106294 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106295 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 106354 Query: 546 gggggtgcaaagacagc 562 |||||||| ||||||| Sbjct: 106355 aggggtgcagagacagc 106371
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 878 bits (443), Expect = 0.0 Identities = 503/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130832 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 130831 taaatgaccgctcagtgataaaggaggtaggggtgcagagaca 130789 Score = 878 bits (443), Expect = 0.0 Identities = 503/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104562 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 104563 taaatgaccgctcagtgataaaggaggtaggggtgcagagaca 104605
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 876 bits (442), Expect = 0.0 Identities = 450/453 (99%) Strand = Plus / Minus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 394 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 393 atgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgta 334 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 274 Query: 182 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 atccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttg 214 Query: 242 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 aagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctg 154 Query: 302 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactg 94 Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 34 Query: 422 cccaaaaataacaggggtcaaggtcggccagtg 454 ||||||||||||||||||||||||||||||||| Sbjct: 33 cccaaaaataacaggggtcaaggtcggccagtg 1
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 876 bits (442), Expect = 0.0 Identities = 506/526 (96%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 458 cgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 516 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1530 Query: 517 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1531 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1576
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1041 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1042 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1086
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1043 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 1044 taaatgaccgctcaatgataaaggaggtaggggtgcacagacagc 1088
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 862 bits (435), Expect = 0.0 Identities = 507/527 (96%), Gaps = 8/527 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2389 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2443 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2444 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2503 Query: 218 agagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 ggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2563 Query: 277 tg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2564 tggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 2623 Query: 336 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 395 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 2624 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 2683 Query: 396 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 455 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 2684 aggcaaactctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtga 2742 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2743 gacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcc 2802 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2803 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 2849
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 129494 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 129450 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 103006
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 841 bits (424), Expect = 0.0 Identities = 501/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1056 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1100
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 514 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 558
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 139332 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 139331 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 139287 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110728 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110729 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110773
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 831 bits (419), Expect = 0.0 Identities = 498/525 (94%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 530 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 574
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 831 bits (419), Expect = 0.0 Identities = 473/491 (96%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 72 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 131 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 132 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 191 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 192 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 251 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 252 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 312 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 372 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 431 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 432 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 491 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 492 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 1066 Query: 552 gcaaagacagc 562 ||||||||||| Sbjct: 1067 gcaaagacagc 1077
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 829 bits (418), Expect = 0.0 Identities = 501/526 (95%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 98 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 156 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 157 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 216 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 217 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 277 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 337 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 397 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 456 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 457 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 516 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 517 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagc 1100
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 829 bits (418), Expect = 0.0 Identities = 501/526 (95%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 398 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 456 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 457 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 516 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 517 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 177879 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 177924 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 511 aggcccctaaatgaccgctcag 532 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 827 bits (417), Expect = 0.0 Identities = 499/525 (95%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1055 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1099
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 813 bits (410), Expect = 0.0 Identities = 498/526 (94%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 398 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 456 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 457 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 516 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 517 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1035 ctaattgatcgctcagtgataaaggaggtaggggtgcagagacagc 1080
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 813 bits (410), Expect = 0.0 Identities = 496/525 (94%), Gaps = 11/525 (2%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaaggaggtaggggtgcaaagacagc 1094
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 809 bits (408), Expect = 0.0 Identities = 447/460 (97%) Strand = Plus / Plus Query: 103 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 162 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 163 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 222 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 223 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 283 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 343 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 402 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 403 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 462 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 463 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 523 gaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacagc 1061
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 52065 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 52011 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52010 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 51951 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51950 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 51891 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51890 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 51831 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51830 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 51771 Query: 398 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 456 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 457 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 51651 Query: 517 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 562 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 51650 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 51604 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 37763 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 37817 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37818 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 37877 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37878 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 37937 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37938 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 37997 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37998 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 38057 Query: 398 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 456 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 457 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 38177 Query: 517 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 562 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 38178 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 38224
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 4691 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 4745 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4746 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 4805 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4806 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 4865 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4866 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 4925 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4926 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 4985 Query: 398 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 456 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 457 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 5105 Query: 517 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 562 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 5106 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 5152
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 797 bits (402), Expect = 0.0 Identities = 520/557 (93%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 533 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 592 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 593 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 647 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 648 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctatccat 707 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 708 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 767 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 827 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 828 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 887 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 888 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccc 947 Query: 427 aaataacagggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 |||||||||||| | |||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 948 aaataacaggggataaaggtcaaccagtgagacggtgggggataagcttcatcgtcaaga 1007 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1008 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggt 1067 Query: 546 gggggtgcaaagacagc 562 || ||||||||||||| Sbjct: 1068 aggagtgcaaagacagc 1084
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 765 bits (386), Expect = 0.0 Identities = 516/557 (92%), Gaps = 7/557 (1%) Strand = Plus / Minus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 117616 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 117557 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 117556 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 117502 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 117501 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccat 117442 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 117441 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 117382 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117381 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 117322 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117321 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 117262 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 117261 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccc 117202 Query: 427 aaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 |||||| | ||||| | |||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 117201 aaataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaaga 117142 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 117141 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggt 117082 Query: 546 gggggtgcaaagacagc 562 || ||||||||||||| Sbjct: 117081 aggagtgcaaagacagc 117065 Score = 765 bits (386), Expect = 0.0 Identities = 516/557 (92%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 90486 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 90545 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 90546 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 90600 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 90601 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccat 90660 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 90661 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 90720 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90721 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 90780 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 90781 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 90840 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 90841 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccc 90900 Query: 427 aaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 |||||| | ||||| | |||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 90901 aaataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaaga 90960 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 90961 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggt 91020 Query: 546 gggggtgcaaagacagc 562 || ||||||||||||| Sbjct: 91021 aggagtgcaaagacagc 91037
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 759 bits (383), Expect = 0.0 Identities = 515/556 (92%), Gaps = 10/556 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 86796 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 86855 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 86856 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 86910 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86911 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 86970 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 86971 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 87030 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87031 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 87090 Query: 308 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 366 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 87091 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 87150 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 || ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 87151 gtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc-- 87207 Query: 427 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 486 ||||| |||||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 87208 -aataaaaggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagag 87266 Query: 487 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 546 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 87267 gggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagta 87326 Query: 547 ggggtgcaaagacagc 562 | ||||||||||||| Sbjct: 87327 cgagtgcaaagacagc 87342
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 757 bits (382), Expect = 0.0 Identities = 515/557 (92%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 533 agctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 592 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| ||||| |||||| |||||||||| || |||||||||||||||||||| Sbjct: 593 cggcgacttataggtagtggcctggttaaggggac-----ccaccggagccgtagcgaaa 647 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 648 gcgagtcttcctggggcaattgtcactacttatggacccgaacctgggtgatctatccat 707 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 ||||||||||||||| || |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 708 gaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 767 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 827 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 828 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 887 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 888 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcc 947 Query: 427 aaataacagggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 |||||| |||| | | |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 948 gaataacgggggataagggtcaaccagtgagacggtgggggataagcttcatcgtcgaga 1007 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1008 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggt 1067 Query: 546 gggggtgcaaagacagc 562 || ||||||||||||| Sbjct: 1068 aggagtgcaaagacagc 1084
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 755 bits (381), Expect = 0.0 Identities = 519/561 (92%), Gaps = 12/561 (2%) Strand = Plus / Minus Query: 9 gctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 68 |||||||| |||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 146025 gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagcc 145966 Query: 69 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 128 ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 145965 ggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaag 145911 Query: 129 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 188 |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145910 cgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 145851 Query: 189 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 248 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 145850 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 145791 Query: 249 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 308 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 145790 agcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctcc 145731 Query: 309 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 367 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 145730 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 145671 Query: 368 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccca 425 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 145670 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 145611 Query: 426 a---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 | ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 145610 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 145551 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 145550 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaagg 145491 Query: 542 aggtgggggtgcaaagacagc 562 |||| || ||||| ||||||| Sbjct: 145490 aggtaggagtgcagagacagc 145470 Score = 755 bits (381), Expect = 0.0 Identities = 519/561 (92%), Gaps = 12/561 (2%) Strand = Plus / Plus Query: 9 gctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 68 |||||||| |||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 112437 gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagcc 112496 Query: 69 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 128 ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 112497 ggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaag 112551 Query: 129 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 188 |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112552 cgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 112611 Query: 189 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 248 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 112612 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 112671 Query: 249 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 308 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112672 agcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctcc 112731 Query: 309 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 367 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 112732 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 112791 Query: 368 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccca 425 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 112792 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 112851 Query: 426 a---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 481 | ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 112852 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 112911 Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 112912 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaagg 112971 Query: 542 aggtgggggtgcaaagacagc 562 |||| || ||||| ||||||| Sbjct: 112972 aggtaggagtgcagagacagc 112992
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 747 bits (377), Expect = 0.0 Identities = 464/489 (94%), Gaps = 8/489 (1%) Strand = Plus / Plus Query: 78 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 136 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 137 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 194 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 195 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 254 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 255 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 314 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 374 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 433 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 434 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 493 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 494 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 553 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgc 1088 Query: 554 aaagacagc 562 | ||||||| Sbjct: 1089 agagacagc 1097
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 458 cgatgggggataagctt 474 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 743 bits (375), Expect = 0.0 Identities = 433/451 (96%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 98 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 156 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 157 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 216 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 217 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 277 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 337 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 396 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 397 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 456 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 457 acgatgggggataagcttcatcgtcgagagg 487 ||| ||||||||||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgtcgagagg 365188 Score = 121 bits (61), Expect = 3e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 482 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 541 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 542 aggtgggggtgcaaagacagc 562 |||| |||||||| ||||||| Sbjct: 129287 aggtaggggtgcagagacagc 129267 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 733 bits (370), Expect = 0.0 Identities = 512/556 (92%), Gaps = 9/556 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 88882 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 88941 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 88942 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 88996 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 88997 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 89056 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 89057 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 89116 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89117 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 89176 Query: 308 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 366 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89177 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 89236 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 || ||||| || |||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 89237 gtacgggccacgagagcggtaccaaatcgaggcaaactctgaatactagat-taccccaa 89295 Query: 427 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 486 | || ||||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 89296 ta--aaagggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagag 89353 Query: 487 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 546 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 89354 gggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagta 89413 Query: 547 ggggtgcaaagacagc 562 | ||||||||||||| Sbjct: 89414 cgagtgcaaagacagc 89429
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 731 bits (369), Expect = 0.0 Identities = 510/556 (91%), Gaps = 6/556 (1%) Strand = Plus / Minus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| ||||||||||||| |||||||||| |||||||| Sbjct: 127908 agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagc 127849 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 127848 cggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 127794 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127793 gcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccat 127734 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| Sbjct: 127733 gaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaat 127674 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127673 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 127614 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 127613 cccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcg 127554 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127553 gtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgaccccc 127494 Query: 427 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 486 || ||| ||| | |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 127493 gaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagag 127434 Query: 487 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 546 || |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 127433 gggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggta 127374 Query: 547 ggggtgcaaagacagc 562 || ||||||||||||| Sbjct: 127373 ggagtgcaaagacagc 127358 Score = 731 bits (369), Expect = 0.0 Identities = 510/556 (91%), Gaps = 6/556 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| ||||||||||||| |||||||||| |||||||| Sbjct: 95539 agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagc 95598 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 95599 cggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 95653 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95654 gcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccat 95713 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| Sbjct: 95714 gaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaat 95773 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95774 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 95833 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 95834 cccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcg 95893 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95894 gtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgaccccc 95953 Query: 427 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 486 || ||| ||| | |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 95954 gaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagag 96013 Query: 487 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 546 || |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 96014 gggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggta 96073 Query: 547 ggggtgcaaagacagc 562 || ||||||||||||| Sbjct: 96074 ggagtgcaaagacagc 96089
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 718 bits (362), Expect = 0.0 Identities = 510/557 (91%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 537 agctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 596 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 597 cggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 651 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 || |||||| | |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 gcaagtcttcctggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 711 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 712 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 771 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 831 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 832 cccgaaatgcgttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcg 891 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| | Sbjct: 892 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactggataggactccc 951 Query: 427 aaataacag-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 485 ||||| || | || | |||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 952 taataatagagagtaagggtcaaccagtgagacagtgggggataagcttcattgtcgaga 1011 Query: 486 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 545 ||| |||||||| ||||||| ||||||||||||||||||||||| |||| |||||||||| Sbjct: 1012 ggggaacagcccagatcaccggctaaggcccctaaatgaccgctaagtggtaaaggaggt 1071 Query: 546 gggggtgcaaagacagc 562 || ||||||||||||| Sbjct: 1072 aggagtgcaaagacagc 1088
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 398 gcaaactctgaatactagatat 419 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 196 bits (99), Expect = 5e-47 Identities = 114/119 (95%) Strand = Plus / Plus Query: 444 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 504 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 5300
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 622 bits (314), Expect = e-175 Identities = 386/409 (94%), Gaps = 6/409 (1%) Strand = Plus / Minus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 115678 agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagc 115619 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 115618 cggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaa 115564 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115563 gcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 115504 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 115503 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 115444 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115443 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 115384 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115383 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 115324 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 415 |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115323 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 622 bits (314), Expect = e-175 Identities = 386/409 (94%), Gaps = 6/409 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 86442 agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagc 86501 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 86502 cggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaa 86556 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86557 gcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 86616 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 86617 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 86676 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86677 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 86736 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86737 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 86796 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 415 |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86797 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 86845 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 398 gcaaactctgaatactagatat 419 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 196 bits (99), Expect = 5e-47 Identities = 114/119 (95%) Strand = Plus / Minus Query: 444 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 504 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 22625
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 398 gcaaactctgaatactagatatgaccc 424 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 436 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 494 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 495 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 555 aagacagc 562 ||||||| Sbjct: 5565 gagacagc 5572
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 398 gcaaactctgaatactagatatgaccc 424 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 436 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 494 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 495 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 555 aagacagc 562 ||||||| Sbjct: 5565 gagacagc 5572
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 35 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 94 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 4449 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 4508 Query: 95 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 154 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 4509 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 4563 Query: 155 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 214 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4564 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4623 Query: 215 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 274 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4624 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 4683 Query: 275 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4743 Query: 335 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4744 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 4803 Query: 394 cgaggcaaactctgaatactagatatg 420 |||||||||||||||||||||| |||| Sbjct: 4804 cgaggcaaactctgaatactaggtatg 4830 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 35 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 94 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 95 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 154 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 155 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 214 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 215 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 274 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 275 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 335 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 394 cgaggcaaactctgaatactagatatg 420 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 35 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 94 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 150686 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 150627 Query: 95 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 154 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 150626 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 150572 Query: 155 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 214 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150571 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 150512 Query: 215 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 274 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150511 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 150452 Query: 275 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150451 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 150392 Query: 335 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150391 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150332 Query: 394 cgaggcaaactctgaatactagatatg 420 |||||||||||||||||||||| |||| Sbjct: 150331 cgaggcaaactctgaatactaggtatg 150305 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 35 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 94 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 117980 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 118039 Query: 95 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 154 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 118040 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 118094 Query: 155 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 214 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 118154 Query: 215 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 274 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118155 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 118214 Query: 275 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118215 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 118274 Query: 335 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118275 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 118334 Query: 394 cgaggcaaactctgaatactagatatg 420 |||||||||||||||||||||| |||| Sbjct: 118335 cgaggcaaactctgaatactaggtatg 118361 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Minus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 35 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 94 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 95 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 154 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 155 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 214 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 215 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 274 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 275 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 335 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 394 cgaggcaaactctgaatactagatatg 420 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 603 bits (304), Expect = e-169 Identities = 496/558 (88%), Gaps = 8/558 (1%) Strand = Plus / Minus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 138735 agctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagc 138676 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||| | ||| ||||||||||||| |||||||||||||||||||| Sbjct: 138675 cggcgacttataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaa 138621 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| ||||| | |||| ||||||||||||||||||| ||||||||||||||| Sbjct: 138620 gcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccat 138561 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||||| ||| | | ||||||||||||||||||||||||| ||| Sbjct: 138560 gaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaat 138501 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 138500 cagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctc 138441 Query: 308 cccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||| ||||||| || | || | |||||||||||||| || Sbjct: 138440 cccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacg 138381 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| |||| |||||||| |||||||||||||||||||| | |||| ||| | Sbjct: 138380 gtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggcccca 138321 Query: 427 aaataaca--ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 484 | | ||| |||| ||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 138320 gagtcacacgagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgag 138261 Query: 485 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 544 |||| |||||||| |||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 138260 aggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggagg 138201 Query: 545 tgggggtgcaaagacagc 562 | || ||||||||||||| Sbjct: 138200 taggagtgcaaagacagc 138183 Score = 603 bits (304), Expect = e-169 Identities = 496/558 (88%), Gaps = 8/558 (1%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 83142 agctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagc 83201 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||| | ||| ||||||||||||| |||||||||||||||||||| Sbjct: 83202 cggcgacttataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaa 83256 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| ||||| | |||| ||||||||||||||||||| ||||||||||||||| Sbjct: 83257 gcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccat 83316 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||||| ||| | | ||||||||||||||||||||||||| ||| Sbjct: 83317 gaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaat 83376 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 83377 cagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctc 83436 Query: 308 cccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcg 366 ||||||||||||||||||||||| ||||||| || | || | |||||||||||||| || Sbjct: 83437 cccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacg 83496 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 426 |||||||||||| |||| |||||||| |||||||||||||||||||| | |||| ||| | Sbjct: 83497 gtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggcccca 83556 Query: 427 aaataaca--ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 484 | | ||| |||| ||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 83557 gagtcacacgagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgag 83616 Query: 485 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 544 |||| |||||||| |||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 83617 aggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggagg 83676 Query: 545 tgggggtgcaaagacagc 562 | || ||||||||||||| Sbjct: 83677 taggagtgcaaagacagc 83694
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 599 bits (302), Expect = e-168 Identities = 386/412 (93%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 |||| |||| |||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 516 agcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 575 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| |||||||||||| |||||||||||| | | ||||||||||| |||||||| Sbjct: 576 cggcgacttataggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaaa 633 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 gcgagtcttcccagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 693 Query: 188 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 247 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 694 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 753 Query: 248 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 813 Query: 308 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 366 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 814 cccgaaatgcgttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcg 873 Query: 367 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 418 |||||||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 874 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 163 bits (82), Expect = 8e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagc 1068
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 597 bits (301), Expect = e-167 Identities = 472/525 (89%), Gaps = 8/525 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||||||||||| ||| ||||||||||| |||||||| ||||| Sbjct: 1040 cctaaatgaccgctaagttataaaggaggtaggggtgcatagaca 1084
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 386 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgg 372 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 23 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75153 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 75094 Query: 83 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 142 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 75093 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 75034 Query: 143 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75033 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 74974 Query: 203 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74973 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 74914 Query: 263 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74913 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Plus Query: 23 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382385 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 382444 Query: 83 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 142 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 382445 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 382504 Query: 143 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382505 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 382564 Query: 203 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382565 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 382624 Query: 263 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382625 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 567 bits (286), Expect = e-158 Identities = 292/294 (99%) Strand = Plus / Minus Query: 23 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113244 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 113185 Query: 83 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 142 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 113184 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 113125 Query: 143 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113124 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 113065 Query: 203 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113064 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 113005 Query: 263 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113004 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 23 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367926 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 367867 Query: 83 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 142 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 367866 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 367807 Query: 143 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367806 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 367747 Query: 203 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367746 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 367687 Query: 263 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367686 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 567 bits (286), Expect = e-158 Identities = 295/298 (98%) Strand = Plus / Minus Query: 23 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184531 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 184472 Query: 83 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 142 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 184471 agtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagg 184412 Query: 143 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184411 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 184352 Query: 203 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184351 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 184292 Query: 263 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184291 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 gtcgagagggaaacagcccggatc 502 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 549 bits (277), Expect = e-153 Identities = 381/412 (92%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 7 gagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 66 |||||||||| |||||||||| ||| | ||||||| |||||||||||||||||||||||| Sbjct: 144451 gagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgag 144510 Query: 67 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 126 ||||||||| ||||| ||||| ||||||||| | ||||| |||||||||||||||| Sbjct: 144511 ccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaa 144568 Query: 127 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 186 |||||||||| | |||| |||||||| |||||| |||||||||||||||||||||||| Sbjct: 144569 agcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatctatcca 144628 Query: 187 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 246 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 144629 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 144688 Query: 247 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144689 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 144748 Query: 307 ccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| | Sbjct: 144749 ccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttcc 144808 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 417 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144809 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 549 bits (277), Expect = e-153 Identities = 381/412 (92%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 7 gagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 66 |||||||||| |||||||||| ||| | ||||||| |||||||||||||||||||||||| Sbjct: 88400 gagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgag 88341 Query: 67 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 126 ||||||||| ||||| ||||| ||||||||| | ||||| |||||||||||||||| Sbjct: 88340 ccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaa 88283 Query: 127 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 186 |||||||||| | |||| |||||||| |||||| |||||||||||||||||||||||| Sbjct: 88282 agcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatctatcca 88223 Query: 187 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 246 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 88222 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 88163 Query: 247 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88162 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 88103 Query: 307 ccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttc 365 |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| | Sbjct: 88102 ccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttcc 88043 Query: 366 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 417 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88042 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 87991 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 145012 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 87839
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 529 bits (267), Expect = e-147 Identities = 377/410 (91%), Gaps = 8/410 (1%) Strand = Plus / Minus Query: 13 ccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 72 |||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||||| Sbjct: 6010 ccaagcagtgggaggagaatggaatctctgaccgcgtgccttttgaagaatgagccggcg 5951 Query: 73 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 132 ||| ||||||||||||||||||||||| || |||||||||||||||||| |||||| Sbjct: 5950 acttataggcagtggcttggttaagggcac-----ccaccggagccgtagcgagagcgag 5896 Query: 133 tcttaatagggcgattgtcactgctt-atggacccgaacctgggtgatctatccatgacc 191 |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5895 tcttcatagggcaattgtcactgctttatggacccgaacctgggtgatctatccatgacc 5836 Query: 192 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 251 ||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct: 5835 aggatgaagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagc 5777 Query: 252 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5776 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 5717 Query: 312 aaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgc 370 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 5716 aaatgcgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtat 5657 Query: 371 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 420 ||| | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5656 aggccgtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 143 bits (72), Expect = 7e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 492 bits (248), Expect = e-136 Identities = 367/404 (90%), Gaps = 6/404 (1%) Strand = Plus / Plus Query: 13 ccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 72 |||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 537 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 596 Query: 73 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 132 ||| |||||||||||| ||||||||| | ||| || |||||||||||||||||||| Sbjct: 597 acttataggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgag 651 Query: 133 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 192 |||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| Sbjct: 652 tctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggcca 711 Query: 193 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 252 || |||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||| Sbjct: 712 gggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcg 771 Query: 253 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 312 |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 772 gatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccga 831 Query: 313 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 371 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 832 aatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcg 891 Query: 372 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 415 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 892 ggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 492 bits (248), Expect = e-136 Identities = 367/404 (90%), Gaps = 6/404 (1%) Strand = Plus / Plus Query: 13 ccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 72 |||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 550 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 609 Query: 73 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 132 ||| |||||||||||| ||||||||| | ||| || |||||||||||||||||||| Sbjct: 610 acttataggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgag 664 Query: 133 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 192 |||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| Sbjct: 665 tctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggcca 724 Query: 193 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 252 || |||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||| Sbjct: 725 gggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcg 784 Query: 253 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 312 |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 785 gatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccga 844 Query: 313 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 371 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 845 aatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcg 904 Query: 372 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 415 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 905 ggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 488 bits (246), Expect = e-134 Identities = 368/405 (90%), Gaps = 8/405 (1%) Strand = Plus / Plus Query: 13 ccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 72 |||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 654 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 713 Query: 73 actcataggcagtggcttggttaagggaacg-gaacccaccggagccgtagcgaaagcga 131 ||| |||||||||||| ||||||||| || ||| || ||||||||||||||||||| Sbjct: 714 acttataggcagtggcctggttaagg---cgtgaagcc---ggagccgtagcgaaagcga 767 Query: 132 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 191 ||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| || Sbjct: 768 gtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggcc 827 Query: 192 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 251 ||| |||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 828 agggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagc 887 Query: 252 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 311 ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 888 ggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccg 947 Query: 312 aaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgc 370 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 948 aaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgc 1007 Query: 371 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 415 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1008 gggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 443 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 502 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 503 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 488 bits (246), Expect = e-134 Identities = 276/286 (96%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 595 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 649 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 650 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 709 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 769 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 323 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 484 bits (244), Expect = e-133 Identities = 341/372 (91%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 191 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 250 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 251 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 310 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 311 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 370 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 371 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 430 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 431 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 490 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 491 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 550 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 551 tgcaaagacagc 562 |||||||||||| Sbjct: 2752 tgcaaagacagc 2741 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 158 tatggacccgaacct 172 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 340 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 341 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 400 aaactctgaatactagatatg 420 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 1065
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 340 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 341 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 400 aaactctgaatactagatatg 420 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 4099
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 395 gaggcaaactctgaatactag 415 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 1067
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 398 gcaaactctgaatactagatatgac 422 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 447 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 506 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 507 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagc 1115
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 340 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 341 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 400 aaactctgaatactagatatg 420 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 1065
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 395 gaggcaaactctgaatactag 415 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 395 gaggcaaactctgaatactag 415 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 124198 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 95668
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 395 gaggcaaactctgaatact 413 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 511 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 5114
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 395 gaggcaaactctgaatact 413 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 511 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1081
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 395 gaggcaaactctgaatact 413 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 511 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagaca 1081
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 447/519 (86%), Gaps = 9/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 34 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 93 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 557 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 616 Query: 94 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 153 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 617 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 671 Query: 154 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 213 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 672 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 731 Query: 214 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 273 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 732 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 791 Query: 274 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 333 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 792 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 851 Query: 334 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 391 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 852 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 911 Query: 392 atcgaggcaaactctgaatactaga 416 ||||| ||||||||||||||||||| Sbjct: 912 atcgatgcaaactctgaatactaga 936 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 1063
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Minus Query: 34 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 93 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 115105 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 115046 Query: 94 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 153 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 115045 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 114991 Query: 154 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 213 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 114990 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 114931 Query: 214 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 273 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 114930 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 114871 Query: 274 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 333 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 114870 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 114811 Query: 334 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 391 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 114810 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 114751 Query: 392 atcgaggcaaactctgaatactaga 416 ||||| ||||||||||||||||||| Sbjct: 114750 atcgatgcaaactctgaatactaga 114726 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 34 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 93 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 86883 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 86942 Query: 94 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 153 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 86943 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 86997 Query: 154 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 213 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 86998 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 87057 Query: 214 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 273 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 87058 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 87117 Query: 274 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 333 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 87118 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 87177 Query: 334 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 391 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87178 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 87237 Query: 392 atcgaggcaaactctgaatactaga 416 ||||| ||||||||||||||||||| Sbjct: 87238 atcgatgcaaactctgaatactaga 87262 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 114599 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 87389
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 420 bits (212), Expect = e-114 Identities = 343/384 (89%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 395 gaggcaaactctgaatactagata 418 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 511 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1076
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 96 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 97 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 156 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 157 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 216 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 217 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 277 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 320 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 373 bits (188), Expect = e-100 Identities = 209/216 (96%) Strand = Plus / Plus Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 398 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 457 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 458 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 518 taaatgaccgctcagtgataaaggaggtgggggtgc 553 ||||||| |||||||||||||||||||| ||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc 532
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 418 bits (211), Expect = e-114 Identities = 445/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtatcc 836 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 837 ag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 398 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 455 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 456 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 515 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 516 cctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 154 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 213 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 214 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 273 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 274 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 333 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 334 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 394 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 451 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 452 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 511 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 512 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 98 gg 99 || Sbjct: 602 gg 603
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 398 bits (201), Expect = e-108 Identities = 341/387 (88%), Gaps = 8/387 (2%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct: 966 atctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggtta 1025 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 |||| | |||| |||||||||||||||||||| | |||||| |||||||| Sbjct: 1026 agggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactg 1078 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| | || Sbjct: 1079 tttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaa 1138 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||| Sbjct: 1139 gtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaa 1198 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1199 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 1258 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 ||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1259 actaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 1318 Query: 395 gaggcaaactctgaatactagatatga 421 |||||||||||||||||||||| |||| Sbjct: 1319 gaggcaaactctgaatactagacatga 1345 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 450 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 509 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 510 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1470
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 396 bits (200), Expect = e-107 Identities = 341/386 (88%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 36 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 95 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 96 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 155 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 156 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 215 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 216 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 275 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 276 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 335 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 336 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 395 gaggcaaactctgaatactagatatg 420 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Plus Query: 450 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 509 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 510 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagaca 1022
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 379 bits (191), Expect = e-102 Identities = 196/198 (98%) Strand = Plus / Plus Query: 2 gtgctgagctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 61 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 490 Query: 62 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 atgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 550 Query: 122 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatct 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 gcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatct 610 Query: 182 atccatgaccaggatgaa 199 |||||||||||||||||| Sbjct: 611 atccatgaccaggatgaa 628
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 99 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 100 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 157 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 336 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 337 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 394 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 395 gaggcaaactctgaatactag 415 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 |||||||||| |||| ||||| |||| |||||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtg 1120
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 373 bits (188), Expect = e-100 Identities = 338/385 (87%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 788 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || Sbjct: 789 gccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-ac 847 Query: 338 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 || ||||||||||||||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 848 cgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgag 907 Query: 398 gcaaactctgaatactagatatgac 422 ||| ||| ||||||||||||||||| Sbjct: 908 gcagactatgaatactagatatgac 932 Score = 121 bits (61), Expect = 3e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 425 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 484 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 485 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 544 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 545 t 545 | Sbjct: 1064 t 1064
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 349 bits (176), Expect = 6e-93 Identities = 176/176 (100%) Strand = Plus / Minus Query: 387 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 447 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 507 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 344
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 2e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 339 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 340 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 398 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 399 caaactctgaatactagat 417 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 |||||||||| |||| ||||| |||| ||||||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtg 1200
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 168 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 169 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 228 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 229 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 288 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 289 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 344 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 345 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 404 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 405 ctgaatactag 415 ||||||||| Sbjct: 932 aagaatactag 942 Score = 163 bits (82), Expect = 8e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 ||||||||||||||| ||||| |||||||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtg 1057 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 110 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 169 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 170 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 229 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 230 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 289 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 290 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 348 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 349 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 408 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 409 atactagatatga 421 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 157 bits (79), Expect = 5e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 562 ||||||||||||||||||||| |||||||||||| ||| | ||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagc 1029 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 99 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 157 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 338 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 396 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 397 ggcaaactctgaatacta 414 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 99 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 157 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 218 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 277 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 278 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 337 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 338 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 396 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 397 ggcaaactctgaatacta 414 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 508 ctaaggcccctaaat 522 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 508 ctaaggcccctaaat 522 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 46 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 105 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 106 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 164 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 165 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 224 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 225 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 284 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 285 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 343 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 344 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 403 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 404 tctgaatacta 414 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 521 atgaccgctcagtgataaaggaggtgg 547 || | ||| |||| ||||||||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtgg 2864
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 9e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 103 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 162 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 163 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 222 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 223 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 281 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 9e-83 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 99 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 156 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 157 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 216 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 217 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 277 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 334 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 335 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 394 cgaggcaaactctgaatactag 415 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 ||||||||| |||| ||||| |||| ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtg 1030
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 313 bits (158), Expect = 3e-82 Identities = 158/158 (100%) Strand = Plus / Plus Query: 405 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 465 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 525 ccgctcagtgataaaggaggtgggggtgcaaagacagc 562 |||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagc 158
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 219 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 278 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 279 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 338 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 339 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 398 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 399 caaactctgaatactagatat 419 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 146 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 205 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 206 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 265 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 266 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 325 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 326 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 382 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 383 cggtaccaaatcgaggcaaactctgaatactaga 416 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 509 taaggcccctaaatgaccgctcagtg 534 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 162 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 221 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 222 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 281 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 282 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 340 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 341 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 400 aaactctgaatactagatatgac 422 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 511 aggcccctaaatg 523 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgact 75 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 115 agccgtagcgaaagcgagtcttaatagggcgat 147 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 162 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 221 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 222 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 281 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 282 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 340 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 341 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 400 aaactctgaatactagatatgac 422 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 511 aggcccctaaatg 523 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgact 75 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 115 agccgtagcgaaagcgagtcttaatagggcgat 147 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 162 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 221 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 222 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 281 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 282 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 340 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 341 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 400 aaactctgaatactagatatgac 422 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 511 aggcccctaaatg 523 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgact 75 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 115 agccgtagcgaaagcgagtcttaatagggcgat 147 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 338 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 339 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 398 gcaaactctgaatacta 414 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 338 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 339 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 398 gcaaactctgaatacta 414 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 521 atgaccgctcagtgataaaggaggtg 546 ||| ||||| |||| |||||||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtg 192915 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 521 atgaccgctcagtgataaaggaggtg 546 ||| ||||| |||| |||||||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtg 143867
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 3e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 98 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 157 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 158 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 218 agaggtcc 225 ||||||| Sbjct: 8 ggaggtcc 1
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 112 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 171 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 172 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 231 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 232 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 291 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 292 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 351 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 352 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 411 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 412 ct 413 || Sbjct: 2489 ct 2490 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtggg 548 |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtggg 2604 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 149 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 208 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 209 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 268 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 269 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 328 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 329 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 385 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 386 taccaaatcgaggcaaactctgaatactaga 416 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 163 bits (82), Expect = 8e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtg 1063 Score = 89.7 bits (45), Expect = 9e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 96 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 168 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 169 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 228 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 229 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 288 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 289 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 347 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 408 aatactagata 418 ||||||||||| Sbjct: 921 aatactagata 931 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 546 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 1042 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgact 75 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 168 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 169 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 228 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 229 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 288 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 289 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 347 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 408 aatactagata 418 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 546 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 25851 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgact 75 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 170 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 171 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 230 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 231 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 290 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 291 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 349 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 350 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 409 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 410 tac 412 ||| Sbjct: 549 tac 551 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 548 |||||| ||| ||||| ||| |||||||||||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtggg 666 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 48 gtgcctgttgaagaatgagccggcgactcatagg 81 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 115 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 174 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 175 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 234 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 235 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 294 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 295 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 351 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 352 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 411 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 412 ctaga 416 ||||| Sbjct: 935 ctaga 939 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtg 1054 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 96 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 179 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 180 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 239 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 240 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 299 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 300 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 356 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 357 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 413 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 509 taaggcccctaaat 522 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 81 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 115 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 174 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 175 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 234 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 235 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 294 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 295 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 351 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 352 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 411 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 412 ctaga 416 ||||| Sbjct: 2817 ctaga 2821 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtg 2936 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 38 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 96 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 124 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 183 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 184 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 243 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 244 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 303 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 304 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 362 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 363 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 124 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 183 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 184 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 243 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 244 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 303 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 304 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 362 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 363 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtggg 548 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtggg 189971 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtggg 548 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtggg 151398 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 47 cgtgcctgttgaagaatgagccggcgactcatag 80 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 47 cgtgcctgttgaagaatgagccggcgactcatag 80 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 338 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 339 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 397 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 398 gcaaactctgaatacta 414 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 521 atgaccgctcagtgataaaggaggtg 546 ||| ||||| |||| |||||||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtg 1084
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 48 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 107 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 108 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 167 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 168 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 227 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 228 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 287 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 288 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 345 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 346 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 405 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 406 tgaatacta 414 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 7e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 338 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 339 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 398 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 399 caaactctgaatacta 414 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 511 aggcccctaaat 522 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 451 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 510 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 511 aggcccctaaat 522 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtggg 5558 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtggg 212214 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 413 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 472 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 473 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 532 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 533 tgataaaggaggtgggggtgcaaaga 558 |||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaaga 19152975
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 413 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 472 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 473 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 532 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 533 tgataaaggaggtgggggtgcaaaga 558 |||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaaga 76370
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 157 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 216 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 217 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 277 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 336 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 337 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 394 cgaggcaaactctgaatact 413 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 |||||||||||||| || ||| |||| |||||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtg 1062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 157 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 216 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 217 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 277 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 336 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 337 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 393 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 394 cgaggcaaactctgaatact 413 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtg 546 |||||||||||||| || ||| |||| |||||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtg 2800 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 100 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 101 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 160 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 161 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 220 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 221 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 280 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 281 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 326 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | |||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtggg 3259 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 348 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 406 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 407 gaatac 412 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 165 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 166 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 225 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 226 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 285 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 286 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 342 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 343 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 401 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 402 actctgaatactagata 418 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 483 agagggaaacagcccggatcaccagctaaggcccctaaatg 523 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 165 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 166 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 225 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 226 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 285 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 286 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 342 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 343 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 401 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 402 actctgaatactagata 418 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 483 agagggaaacagcccggatcaccagctaaggcccctaaatg 523 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 124 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 183 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 184 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 243 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 244 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 303 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 304 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 360 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 361 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagaca 678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 83 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 170 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 171 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 230 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 231 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 290 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 291 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 347 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 408 aatactag 415 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 170 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 171 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 230 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 231 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 290 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 291 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 347 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 408 aatactag 415 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 509 taaggcccctaaatg 523 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 509 taaggcccctaaatg 523 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 7e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 110 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 169 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 170 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 229 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 230 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 289 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 290 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 343 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 344 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 403 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 404 tctgaatact 413 | ||||||| Sbjct: 924 taagaatact 933 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 445 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 504 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 505 cagctaaggcccctaaatgaccgctcagtgataaagga 542 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 7e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | || |||||||||||||||||| Sbjct: 356490 atcagtactaagtgataaaggaggtggg 356517 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 99 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 156 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 157 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 216 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 217 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 276 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 277 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 336 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 337 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 395 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 396 aggcaaactctgaatacta 414 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 509 taaggcccctaaat 522 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtggg 2137742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtggg 477118 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 124 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 183 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 184 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 243 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 244 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 303 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 304 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 360 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 361 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagaca 678 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 83 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 99 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 158 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 159 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 218 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 219 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 278 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 279 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 330 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 450 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 509 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 510 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagaca 2801
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtggg 338993 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtggg 132053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 115 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 172 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 293 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 349 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 350 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 408 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 409 atactagatatg 420 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 509 taaggcccctaaatg 523 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 99 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 51 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 110 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 169 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 170 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 229 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 230 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 289 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 290 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 348 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 349 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 408 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 409 atacta 414 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 51 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 110 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 169 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 170 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 229 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 230 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 289 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 290 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 348 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 349 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 408 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 409 atacta 414 |||||| Sbjct: 19901 atacta 19906 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | ||| |||||||||||| ||||| Sbjct: 39408 ataattgctaagtgataaaggatgtggg 39381 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | ||| |||||||||||| ||||| Sbjct: 19992 ataattgctaagtgataaaggatgtggg 20019
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 165 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 166 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 225 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 226 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 285 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 286 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 342 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 343 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 401 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 402 actctgaatactagata 418 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 483 agagggaaacagcccggatcaccagctaaggcccctaaatg 523 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 46 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 105 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 106 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 165 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 166 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 225 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 226 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 285 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 286 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 345 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 346 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 404 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 405 ctgaatac 412 | |||||| Sbjct: 544 cagaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 548 |||||| ||||||||| ||| |||| ||||||||||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtggg 666
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 301 ggttctccccgaaatgcgttgaggcgcagc 330 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 127 bits (64), Expect = 4e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagaca 679 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 408 aatac 412 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcga 73 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 301 ggttctccccgaaatgcgttgaggcgcagc 330 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 546 |||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtg 665 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 408 aatac 412 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 169 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 170 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 229 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 230 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 289 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 290 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 347 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 348 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 406 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 407 gaatactagatatg 420 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 509 taaggcccctaaatg 523 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 89 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 81 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 81 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 81 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 219 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 278 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 279 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 338 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 339 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 395 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 396 aggcaaactctgaatactag 415 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 42 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 507 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 508 ctaaggcccctaaatga 524 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 148 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 203 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 169 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 170 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 229 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 230 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 289 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 290 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 347 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 348 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 406 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 407 gaatactagatatg 420 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 509 taaggcccctaaatg 523 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 89 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 110 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 169 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 170 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 229 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 230 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 289 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 290 cagagctagctggttctccccgaaatgcgttgaggcgcagc 330 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagaca 1056 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 343 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 402 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 403 ctctgaatactagata 418 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 7e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 167 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 168 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 227 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 228 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 287 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 288 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 344 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 345 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 403 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 404 tctgaatactagatatg 420 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 469 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 523 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 7e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 168 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 169 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 228 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 229 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 288 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 289 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 346 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 347 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 405 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 406 tgaatactagatat 419 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 98 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 483 agagggaaacagcccggatcaccagctaaggcccctaaatga 524 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 301 ggttctccccgaaatgcgttgaggcgcagcagttg 335 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagaca 681 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 408 aatac 412 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcga 73 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 170 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 171 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 230 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 231 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 290 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 291 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 348 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 349 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 408 aatac 412 ||||| Sbjct: 547 aatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagaca 678 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 83 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 111 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 170 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 171 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 230 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 231 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 290 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 291 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 348 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 349 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 408 aatactagat 417 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 483 agagggaaacagcccggatcaccagctaaggcccctaaatg 523 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | |||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtggg 320641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtggg 1775439 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtggg 376630 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | |||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtggg 3064 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | |||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtggg 3065 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | | || |||||||| ||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtggg 3292 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 301 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 357 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 358 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 412 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 449 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 508 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 509 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 554 ||||| ||| |||||| || ||||| |||||||||||| ||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgca 671 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgact 75 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | |||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtggg 19816 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | |||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtggg 1570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 521 atgaccgctcagtgataaaggaggtggg 548 || | |||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtggg 316130 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 362 tttcggtgcgggctgcgcgagcggtaccaaatcga 396 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 408 aatac 412 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 408 aatac 412 ||||| Sbjct: 1049320 aatac 1049316 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1659555 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1049189 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 113 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 172 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 173 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 232 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 233 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 292 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 293 agctagctggttctccccgaaatgcgttgaggcg 326 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 408 aatac 412 ||||| Sbjct: 1186 aatac 1190 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 121 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 180 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 181 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 240 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 241 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 300 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 301 ggttctccccgaaatgcgttgaggcg 326 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 408 aatac 412 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 348 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 407 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 408 aatac 412 ||||| Sbjct: 571559 aatac 571563 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 2657231 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 448 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 507 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 508 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 560 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 571690 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 41 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 240 bits (121), Expect = 4e-60 Identities = 177/196 (90%), Gaps = 5/196 (2%) Strand = Plus / Plus Query: 8 agctcccaancagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 67 ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2577 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 2636 Query: 68 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 127 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 2637 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 2691 Query: 128 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 187 ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 2692 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccat 2751 Query: 188 gaccaggatgaagctt 203 |||||||||||||||| Sbjct: 2752 gaccaggatgaagctt 2767
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 163 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 222 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 223 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 282 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 283 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 342 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 343 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 401 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 402 actctgaatacta 414 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 461 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 520 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 521 atgaccgctcagtgataaaggaggtgggggtgc 553 || | ||| |||| ||||||||||||| |||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgc 1502 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 39 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 88 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1010 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 162 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 221 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 222 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 281 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 282 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 341 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 342 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 399 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 400 aaactctgaatactagatatg 420 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 40 ctgaccgcgtgcctgttgaagaatgagccggcgact 75 |||||||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 447 ggccagtgagacgatgggggataagcttcat 477 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,387,127 Number of Sequences: 3902068 Number of extensions: 3387127 Number of successful extensions: 67816 Number of sequences better than 10.0: 2711 Number of HSP's better than 10.0 without gapping: 2729 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 53294 Number of HSP's gapped (non-prelim): 13994 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)