Clone Name
basd2o13
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds
424
e-115
2 gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding p...
396
e-107
3 emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein
355
1e-94
4 gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein g...
349
7e-93
5 emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putat...
325
1e-85
6 emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding...
323
4e-85
7 emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll ...
315
1e-82
8 ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predic...
311
1e-81
9 gb|AY100470.1| Oryza sativa (indica cultivar-group) putative sol...
311
1e-81
10 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
311
1e-81
11 dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D...
311
1e-81
12 dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clon...
311
1e-81
13 dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clon...
311
1e-81
14 dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clon...
311
1e-81
15 dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clon...
311
1e-81
16 emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chl...
307
2e-80
17 emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlo...
307
2e-80
18 gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protei...
303
4e-79
19 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
287
2e-74
20 dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D...
287
2e-74
21 dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D...
287
2e-74
22 dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clon...
287
2e-74
23 dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clon...
287
2e-74
24 dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clon...
287
2e-74
25 dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clon...
287
2e-74
26 ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predic...
285
8e-74
27 dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D...
285
8e-74
28 dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clon...
285
8e-74
29 dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clon...
285
8e-74
30 dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clon...
280
5e-72
31 dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRN...
280
5e-72
32 gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B...
276
8e-71
33 emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chloro...
266
8e-68
34 gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B...
260
5e-66
35 gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B...
260
5e-66
36 gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B...
260
5e-66
37 gb|AY109324.1| Zea mays CL187_1 mRNA sequence
258
2e-65
38 dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue...
250
5e-63
39 emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chloro...
250
5e-63
40 emb|AJ843976.1| Plantago major partial mRNA for light harvesting...
246
7e-62
41 emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll...
238
2e-59
42 gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b ...
228
2e-56
43 emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b bin...
226
7e-56
44 gb|AY198376.1| Citrus limon chlorophyll a/b-binding protein prec...
204
2e-49
45 gb|U21111.1|STU21111 Solanum tuberosum chlorophyll a/b binding p...
204
2e-49
46 dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone...
200
4e-48
47 gb|U21114.1|STU21114 Solanum tuberosum chlorophyll a/b binding p...
196
6e-47
48 gb|U20983.1|STU20983 Solanum tuberosum chlorophyll a/b binding p...
196
6e-47
49 gb|M16058.1|CUSLHCPB Cucumber LHCP mRNA encoding chlorophyll a/b...
196
6e-47
50 gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/...
192
9e-46
51 gb|AF034631.1|AF034631 Panax ginseng chlorophyll a/b binding pro...
192
9e-46
52 gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene...
192
9e-46
53 emb|X02356.1|PECAB91R Petunia gene for chlorophyll a/b binding p...
190
4e-45
54 gb|U21113.1|STU21113 Solanum tuberosum chlorophyll a/b binding p...
188
1e-44
55 gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast c...
186
6e-44
56 gb|M16057.1|CUSLHCPA Cucumber LHCP mRNA encoding chlorophyll a/b...
186
6e-44
57 dbj|D14002.1|LAUCAB Lettuce mRNA for light-harvesting chlorophyl...
180
4e-42
58 emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting...
178
1e-41
59 dbj|AB012641.1| Nicotiana sylvestris Lhcb1*9 gene for light harv...
178
1e-41
60 ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2...
176
6e-41
61 ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2...
176
6e-41
62 ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll bindin...
176
6e-41
63 ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) ...
176
6e-41
64 gb|AY142513.1| Arabidopsis thaliana putative photosystem II type...
176
6e-41
65 gb|AY045806.1| Arabidopsis thaliana putative photosystem II type...
176
6e-41
66 gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 ma...
176
6e-41
67 gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 ma...
176
6e-41
68 gb|AY081587.1| Arabidopsis thaliana photosystem II type I chloro...
176
6e-41
69 gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, co...
176
6e-41
70 gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, co...
176
6e-41
71 gb|AY065125.1| Arabidopsis thaliana photosystem II type I chloro...
176
6e-41
72 gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 ...
176
6e-41
73 gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 ...
176
6e-41
74 gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 ...
176
6e-41
75 gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, co...
176
6e-41
76 gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 ...
176
6e-41
77 emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Co...
176
6e-41
78 emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Co...
176
6e-41
79 emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II c...
176
6e-41
80 gb|AF162200.1|AF162200 Lactuca sativa light-harvesting chlorophy...
174
2e-40
81 gb|AF003129.1|AF003129 Mesembryanthemum crystallinum chlorophyll...
174
2e-40
82 emb|BX814757.1|CNS0AEAM Arabidopsis thaliana Full-length cDNA Co...
170
3e-39
83 emb|X02359.1|PECAB22L Petunia gene for chlorophyll a/b binding p...
170
3e-39
84 emb|X52741.1|NTCAB16 Tabacco Cab16 mRNA for major chlorophyll a/...
170
3e-39
85 gb|DQ252493.1| Solanum tuberosum clone 062G02 chlorophyll a-b bi...
170
3e-39
86 dbj|AB012638.1| Nicotiana sylvestris Lhcb1*5, Lhcb1*6 genes for ...
170
3e-39
87 emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Co...
168
1e-38
88 emb|X02358.1|PECAB25 Petunia gene for chlorophyll a/b binding pr...
167
5e-38
89 gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein...
167
5e-38
90 gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence
165
2e-37
91 emb|AJ318069.1|STU318069 Solanum tuberosum mRNA for ferredoxin-t...
165
2e-37
92 emb|X52744.1|NTCAB40 Tabacco Cab40 mRNA for major chlorophyll a/...
163
8e-37
93 gb|AF003127.1|AF003127 Mesembryanthemum crystallinum chlorophyll...
163
8e-37
94 gb|M21398.1|TOBCABB Tobacco chlorophyll a/b-binding protein (Cab...
163
8e-37
95 gb|M21397.1|TOBCABA Tobacco chlorophyll a/b-binding protein (Cab...
163
8e-37
96 gb|AY617096.1| Picea sitchensis chloroplast light harvesting chl...
161
3e-36
97 emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Co...
161
3e-36
98 emb|X03907.1|ATLHCP1 A.thaliana gene (LHCP AB 165) for chlorophy...
161
3e-36
99 emb|X81810.1|PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for lig...
161
3e-36
100 emb|X81809.1|PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for ligh...
161
3e-36
101 gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding p...
161
3e-36
102 emb|X52743.1|NTCAB21 Tabacco Cab21 mRNA for major chlorophyll a/...
159
1e-35
103 dbj|AB012637.1| Nicotiana sylvestris Lhcb1*2, Lhcb1*3, Lhcb1*4 g...
159
1e-35
104 gb|DQ124219.1| Fagus sylvatica putative chlorophyll a/b-binding ...
157
5e-35
105 emb|X16536.1|GMCAB5 G.max DNA for Cab5
157
5e-35
106 emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-h...
157
5e-35
107 gb|M14443.1|TOMCBPA Tomato chlorophyll a/b-binding protein gene ...
157
5e-35
108 gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding...
155
2e-34
109 gb|U21112.1|STU21112 Solanum tuberosum chlorophyll a/b binding p...
155
2e-34
110 ref|NM_102732.2| Arabidopsis thaliana CAB2; chlorophyll binding ...
153
8e-34
111 gb|BT000726.1| Arabidopsis thaliana clone RAFL06-67-G16 (R11472)...
153
8e-34
112 gb|AY128345.1| Arabidopsis thaliana photosystem II type I chloro...
153
8e-34
113 gb|AY081572.1| Arabidopsis thaliana chlorophyll a/b-binding prot...
153
8e-34
114 gb|AY062814.1| Arabidopsis thaliana chlorophyll a/b-binding prot...
153
8e-34
115 gb|AY060500.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, com...
153
8e-34
116 gb|AY054198.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, com...
153
8e-34
117 gb|AY052237.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, com...
153
8e-34
118 gb|DQ355993.1| Brassica napus chlorophyll a/b binding protein (L...
153
8e-34
119 emb|BX815776.1|CNS0AE4K Arabidopsis thaliana Full-length cDNA Co...
153
8e-34
120 gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N...
153
8e-34
121 ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BIND...
151
3e-33
122 gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b...
151
3e-33
123 gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-bin...
151
3e-33
124 gb|AY050935.1| Arabidopsis thaliana putative photosystem II type...
151
3e-33
125 gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, com...
151
3e-33
126 gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 m...
151
3e-33
127 gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, com...
151
3e-33
128 emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Co...
151
3e-33
129 gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P...
151
3e-33
130 emb|X16535.1|GMCAB4 G.max DNA for Cab4
151
3e-33
131 dbj|AB236867.1| Panax ginseng cab mRNA for chlorophyll a/b bindi...
149
1e-32
132 dbj|AB006081.1| Fagus crenata mRNA for chlorophyll a/b-binding p...
149
1e-32
133 gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting ...
147
5e-32
134 emb|X52742.1|NTCAB50 Tabacco Cab50 mRNA for major chlorophyll a/...
147
5e-32
135 emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding ...
145
2e-31
136 emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b...
145
2e-31
137 gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence
143
8e-31
138 emb|BX817619.1|CNS0AAVV Arabidopsis thaliana Full-length cDNA Co...
143
8e-31
139 emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophy...
143
8e-31
140 emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chloro...
143
8e-31
141 gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II ch...
143
8e-31
142 emb|X14341.1|SOCABP S.oleracea chloroplast mRNA for chlorophyll ...
143
8e-31
143 gb|M21396.1|SOYCBPA Soybean light-harvesting chlorophyll a/b-bin...
143
8e-31
144 dbj|AB206466.1| Adiantum capillus-veneris AcCab1 gene for chloro...
141
3e-30
145 gb|M14444.1|TOMCBPB Tomato chlorophyll a/b-binding protein gene ...
141
3e-30
146 dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-b...
141
3e-30
147 gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence
139
1e-29
148 gb|AY430082.1| Trifolium pratense chlorophyll a/b binding protei...
139
1e-29
149 gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvestin...
139
1e-29
150 gb|U21115.1|STU21115 Solanum tuberosum chlorophyll a/b binding p...
139
1e-29
151 emb|X68333.1|HHLHC H.helix mRNA for light harvesting chlorophyll...
139
1e-29
152 gb|L36064.1|PRULHP Prunus persica (clone pAB19) light harvesting...
139
1e-29
153 gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genom...
137
5e-29
154 gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence
137
5e-29
155 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
137
5e-29
156 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
137
5e-29
157 emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Co...
137
5e-29
158 gb|AY086905.1| Arabidopsis thaliana clone 29298 mRNA, complete s...
137
5e-29
159 emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chl...
137
5e-29
160 gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding prot...
137
5e-29
161 gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosyste...
137
5e-29
162 ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll bindin...
135
2e-28
163 ref|NM_102731.2| Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BIND...
135
2e-28
164 gb|AF339687.1| Arabidopsis thaliana putative photosystem II type...
135
2e-28
165 gb|AF326864.1| Arabidopsis thaliana putative photosystem II type...
135
2e-28
166 gb|AY120776.1| Arabidopsis thaliana putative photosystem II type...
135
2e-28
167 gb|AY114594.1| Arabidopsis thaliana chlorophyll a/b-binding prot...
135
2e-28
168 gb|AY065165.1| Arabidopsis thaliana chlorophyll a/b-binding prot...
135
2e-28
169 gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvestin...
135
2e-28
170 emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II ...
135
2e-28
171 emb|X03908.1|ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophy...
135
2e-28
172 gb|BT002103.1| Arabidopsis thaliana putative photosystem II type...
135
2e-28
173 dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clon...
133
8e-28
174 gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting comple...
131
3e-27
175 gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein...
131
3e-27
176 gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chl...
131
3e-27
177 gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlor...
131
3e-27
178 gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (L...
131
3e-27
179 gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvestin...
131
3e-27
180 dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvest...
131
3e-27
181 gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlor...
129
1e-26
182 gb|AY617083.1| Pinus radiata chloroplast light harvesting chloro...
129
1e-26
183 gb|AY617081.1| Pinus echinata chloroplast light harvesting chlor...
129
1e-26
184 dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clon...
129
1e-26
185 gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll...
129
1e-26
186 dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRN...
129
1e-26
187 dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light...
127
5e-26
188 emb|X58229.1|NTCAB7 Tobacco CAB7 gene for chlorophyll a/b bindin...
127
5e-26
189 dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvest...
127
5e-26
190 dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvest...
127
5e-26
191 dbj|AB012640.1| Nicotiana sylvestris Lhcb1*8 gene for light harv...
127
5e-26
192 gb|AY617092.1| Pinus monophylla chloroplast light harvesting chl...
125
2e-25
193 gb|AF039598.1| Prunus persica light harvesting chlorophyll A/B b...
125
2e-25
194 gb|M16887.1|SIPCAB White campion chlorophyll a/b-binding protein...
125
2e-25
195 dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene...
123
7e-25
196 emb|X02357.1|PECAB13 Petunia gene for chlorophyll a/b binding pr...
123
7e-25
197 emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMW...
123
7e-25
198 emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chloro...
123
7e-25
199 dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone...
123
7e-25
200 dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvest...
123
7e-25
201 dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvest...
123
7e-25
202 emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll...
121
3e-24
203 gb|AY617084.1| Pinus contorta chloroplast light harvesting chlor...
121
3e-24
204 gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlo...
121
3e-24
205 emb|Z75663.1|AGCHLABBP A.graveolens mRNA for chlorophyll a/b bin...
121
3e-24
206 emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putativ...
121
3e-24
207 emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b bind...
121
3e-24
208 gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding prot...
121
3e-24
209 gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete s...
119
1e-23
210 dbj|AB012636.1| Nicotiana sylvestris Lhcb1*1 gene for light harv...
119
1e-23
211 emb|X54090.1|GHCAB G.hirsutum cab gene for chlorophyll ab bindin...
117
4e-23
212 gb|AY617093.1| Pinus remota chloroplast light harvesting chlorop...
117
4e-23
213 gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-bindi...
117
4e-23
214 gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding p...
117
4e-23
215 emb|X02360.1|PECAB22R Petunia gene for chlorophyll a/b binding p...
115
2e-22
216 gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting ...
113
7e-22
217 gb|AF295639.1| Beta vulgaris chlorophyll a/b binding protein (ca...
113
7e-22
218 gb|U51632.1|PPU51632 Pinus palustris type 2 light-harvesting chl...
113
7e-22
219 gb|U01964.1|GMU01964 Glycine max cv. Dare photosystem II type I ...
113
7e-22
220 gb|J01253.1|PEACAB15 Pea major chlorophyll a/b-binding thylakoid...
113
7e-22
221 gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-bindi...
113
7e-22
222 gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting ...
111
3e-21
223 emb|AJ000765.1|CRAJ765 Chlamydomonas reinhardtii mRNA for calret...
109
1e-20
224 gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlor...
109
1e-20
225 gb|AY617090.1| Pinus monticola chloroplast light harvesting chlo...
109
1e-20
226 gb|AY617089.1| Pinus lambertiana chloroplast light harvesting ch...
109
1e-20
227 gb|AY617088.1| Pinus flexilis chloroplast light harvesting chlor...
109
1e-20
228 gb|M97171.1|SOYCAB6A Glycine max chlorophyll a/b binding protein...
109
1e-20
229 emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Co...
109
1e-20
230 emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b bindi...
109
1e-20
231 gb|AY845253.1| Pisum sativum light-harvesting chlorophyll-a/b bi...
107
4e-20
232 gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430...
107
4e-20
233 gb|AY219853.1| Nicotiana tabacum chlorophyll a/b binding protein...
107
4e-20
234 gb|AF279248.1|AF279248 Vigna radiata LHCII type II chlorophyll a...
107
4e-20
235 emb|AJ131044.1|CAR131044 Cicer arietinum mRNA for chlorophyll a/...
107
4e-20
236 emb|X58230.1|NTCAB36 Tobacco CAB36 gene for chlorophyll a/b bind...
107
4e-20
237 gb|AF133340.1|AF133340 Phalaenopsis sp. 'KCbutterfly' putative c...
107
4e-20
238 dbj|AB013728.1| Cryptomeria japonica mRNA for light-harvesting c...
105
2e-19
239 emb|X61915.1|PTCABP P.thunbergii cab gene
103
7e-19
240 emb|BX819530.1|CNS0A9V8 Arabidopsis thaliana Full-length cDNA Co...
103
7e-19
241 dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clon...
103
7e-19
242 gb|DQ018376.1| Pinus krempfii chloroplast putative light harvest...
101
3e-18
243 gb|DQ018375.1| Pinus gerardiana chloroplast putative light harve...
101
3e-18
244 gb|AY617091.1| Pinus strobus chloroplast light harvesting chloro...
101
3e-18
245 gb|AY617087.1| Pinus chiapensis chloroplast light harvesting chl...
101
3e-18
246 emb|X13407.1|PTCAB Pinus thunbergii cab mRNA for light-harvestin...
101
3e-18
247 dbj|AB050125.1| Amaranthus tricolor cab1b mRNA for type I chloro...
101
3e-18
248 gb|AF417304.1| Castanea sativa putative chlorophyll-A-B-binding ...
100
1e-17
249 gb|AF279250.1|AF279250 Vigna radiata LHCII type I chlorophyll a/...
100
1e-17
250 emb|X56538.1|PSCABIIC P.sativum Cab-8 gene for photosystemm II c...
100
1e-17
251 emb|Z35160.1|STCHLABP S.tuberosum gene for chlorophyll a/b bindi...
100
1e-17
252 gb|DQ418483.1| Zingiber officinale chloroplast chlorophyll a/b-b...
98
4e-17
253 gb|DQ471302.1| Carya cathayensis putative chloroplast chlorophyl...
96
2e-16
254 gb|AF312227.1|AF312227 Citrus reticulata light-harvesting chloro...
96
2e-16
255 emb|Y13865.1|BVCHLOROP Beta vulgaris mRNA for chlorophyll a/b-bi...
94
7e-16
256 dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clon...
94
7e-16
257 gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting ...
92
3e-15
258 emb|Z13987.1|STCABPSII S.tuberosum gene for chlorophyll a/b-bind...
92
3e-15
259 gb|M64619.1|PEACAB66 Pea cab gene, complete cds
92
3e-15
260 dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvest...
92
3e-15
261 gb|AF072931.1|AF072931 Medicago sativa chlorophyll a/b binding p...
90
1e-14
262 gb|M23532.1|PCPCBP P.patens major chlorophyll binding protein ge...
90
1e-14
263 dbj|AB050123.1| Amaranthus tricolor cab1a mRNA for type I chloro...
90
1e-14
264 emb|BX814964.1|CNS0AE8Q Arabidopsis thaliana Full-length cDNA Co...
88
4e-14
265 dbj|AB012639.1| Nicotiana sylvestris Lhcb1*7 gene for light harv...
88
4e-14
266 gb|AY818400.1| Manihot esculenta chloroplast chlorophyll A/B bin...
86
2e-13
267 emb|X74731.1|AHLHCB A.hypochondriacus Lhcb1*Ah1 mRNA
86
2e-13
268 gb|AY112240.1| Zea mays CL187_6 mRNA sequence
86
2e-13
269 gb|AF279249.1|AF279249 Vigna radiata LHCII type I chlorophyll a/...
84
6e-13
270 gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein...
84
6e-13
271 gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major li...
84
6e-13
272 emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB p...
80
1e-11
273 emb|X69434.1|CSCAB1 C.stellata cab1 mRNA for chlorophyll a/b bin...
80
1e-11
274 gb|K00976.1|PETCAB102 Petunia major chlorophyll a/b binding prot...
80
1e-11
275 gb|AF195221.1|AF195221 Pyrus pyrifolia strain Whangkeumbae chlor...
78
4e-11
276 emb|X74732.1|AHLHAH A.hypochondriacus Lhcb2*Ah1 mRNA
78
4e-11
277 emb|X12980.1|GMCAB2 Soybean Cab2 gene for minor PSII LHCII chlor...
78
4e-11
278 gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chl...
78
4e-11
279 gb|M17558.1|TOMCAB4A Tomato Cab-4 gene encoding chlorophyll a/b-...
78
4e-11
280 gb|M95068.1|MZEORFI Zea mays putative light-harvesting chlorophy...
78
4e-11
281 dbj|AB115772.1| Physcomitrella patens subsp. patens PpLhcb2 gene...
76
2e-10
282 emb|X04966.1|PHCAB37 Petunia Cab gene for chlorophyll a/b bindin...
76
2e-10
283 gb|K00975.1|PETCAB10 Petunia major chlorophyll a/b binding prote...
76
2e-10
284 gb|BT013404.1| Lycopersicon esculentum clone 135718R, mRNA sequence
74
6e-10
285 gb|AF104631.3| Chlamydomonas reinhardtii light harvesting comple...
74
6e-10
286 gb|AY267623.1| Bigelowiella natans chlorophyll a/b-binding prote...
74
6e-10
287 gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting ...
74
6e-10
288 gb|AF268319.1|AF268319 Chlorarachnion CCMP621 light-harvesting c...
74
6e-10
289 emb|BX819881.1|CNS0AA6O Arabidopsis thaliana Full-length cDNA Co...
74
6e-10
290 emb|X60275.1|LELHBC1G L.esculentum lhbC1 gene for LHCII type III
74
6e-10
291 emb|Z49749.1|PMLHCABBP P.menziesii mRNA for light-harvesting chl...
72
2e-09
292 ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA
70
9e-09
293 ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group...
70
9e-09
294 ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group...
70
9e-09
295 ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group...
70
9e-09
296 ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group...
70
9e-09
297 ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group...
70
9e-09
298 ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group...
70
9e-09
299 ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group...
70
9e-09
300 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
70
9e-09
301 dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D...
70
9e-09
302 dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
303 dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
304 dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
305 emb|X16647.1|RSCHABBP Radish mRNA for chlorophyll a/b binding pr...
70
9e-09
306 dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
307 dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
308 dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
309 dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
310 dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
311 dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
312 dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
313 gb|AF022738.1|AF022738 Oryza sativa chlorophyll a-b binding prot...
70
9e-09
314 dbj|AU066541.1| Chlamydomonas sp. HS-5 mRNA for hypothetical pro...
70
9e-09
315 gb|DQ455591.1| Phaseolus vulgaris chloroplast chlorophyll a/b bi...
68
4e-08
316 emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMW...
68
4e-08
317 gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b bin...
68
4e-08
318 gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvestin...
64
6e-07
319 emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chloro...
64
6e-07
320 emb|BX841915.1|CNS09Y31 Arabidopsis thaliana Full-length cDNA Co...
64
6e-07
321 dbj|AU066540.1| Chlamydomonas sp. HS-5 mRNA for hypothetical pro...
64
6e-07
322 gb|BT001933.1| Arabidopsis thaliana clone C105385 putative chlor...
62
2e-06
323 gb|M86906.1|PEACHLROPH Pea (subclone AB9) Cab9 gene, 3' end
62
2e-06
324 gb|AF139465.2|AF139465 Vigna radiata LHCII type III chlorophyll ...
60
9e-06
325 emb|X17697.1|MDCHBP Apple light-harvesting chlorophyll a/b bindi...
60
9e-06
326 gb|M17559.1|TOMCAB5A Tomato Cab-5 gene encoding chlorophyll a/b-...
60
9e-06
327 gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mR...
60
9e-06
328 gb|AC139600.16| Medicago truncatula clone mth2-20m4, complete se...
58
4e-05
329 gb|AF268320.1|AF268320 Chlorarachnion CCMP621 light-harvesting c...
58
4e-05
330 gb|AF207690.1|AF207690 Daucus carota cultivar Kurodagosun chloro...
58
4e-05
331 gb|AF093617.1|AF093617 Acetabularia acetabulum clone JO-10 chlor...
58
4e-05
332 gb|DQ275468.1| Arachis hypogaea clone PNDI 2 unknown mRNA
58
4e-05
333 gb|K00974.1|PETCAB4 Petunia major chlorophyll a/b binding protei...
56
1e-04
334 gb|K00972.1|PETCAB146 Petunia major chlorophyll a/b binding prot...
56
1e-04
335 gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA,...
54
6e-04
336 gb|K00973.1|PETCAB3 Petunia major chlorophyll a/b binding protei...
52
0.002
337 gb|L07120.1|COTIIABINB Gossypium hirsutum chloroplast photosyste...
52
0.002
338 gb|AF268321.1|AF268321 Chlorarachnion CCMP621 light-harvesting c...
50
0.009
339 gb|AY554168.1| Nicotiana tabacum chloroplast chlorophyll a-b bin...
50
0.009
340 gb|AY104614.1| Zea mays PCO084486 mRNA sequence
50
0.009
341 dbj|AP006706.1| Lotus japonicus genomic DNA, chromosome 3, clone...
50
0.009
342 gb|AC115718.14| Mus musculus chromosome 8, clone RP23-247P3, com...
48
0.035
343 gb|AC132390.4| Mus musculus BAC clone RP23-453P1 from chromosome...
48
0.035
344 gb|AE004514.1| Pseudomonas aeruginosa PAO1, section 75 of 529 of...
48
0.035
345 emb|X76632.1|PPCAB P.patens (Hedw.) B.S.G. partial mRNA for chlo...
48
0.035
346 emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20...
48
0.035
347 ref|NM_113685.3| Arabidopsis thaliana LHCB2:4; chlorophyll bindi...
46
0.14
348 ref|XM_483142.1| Oryza sativa (japonica cultivar-group), mRNA
46
0.14
349 gb|BT006298.1| Arabidopsis thaliana At3g27700 mRNA, complete cds
46
0.14
350 gb|AF370557.1|AF370557 Arabidopsis thaliana light harvesting chl...
46
0.14
351 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.14
352 gb|AF134125.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2:4) mRNA...
46
0.14
353 dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic D...
46
0.14
354 dbj|AB018114.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
46
0.14
355 dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.14
356 gb|M34396.1|PMJCABF3 Polystichum munitum chlorophyll a/b-binding...
46
0.14
357 gb|AY845255.1| Pisum sativum light-harvesting chlorophyll-a/b bi...
44
0.54
358 ref|XM_426224.1| PREDICTED: Gallus gallus similar to transcripti...
44
0.54
359 gb|DQ226800.1| Boechera divaricarpa isolate SLW-B-D01 mRNA sequence
44
0.54
360 gb|DQ226734.1| Boechera divaricarpa isolate SLW-A-E08 mRNA sequence
44
0.54
361 gb|AY088541.1| Arabidopsis thaliana clone 7700 mRNA, complete se...
44
0.54
362 gb|AY845254.1| Pisum sativum light-harvesting chlorophyll-a/b bi...
42
2.1
363 ref|NM_124807.2| Arabidopsis thaliana LHCB3 (LIGHT-HARVESTING CH...
42
2.1
364 ref|NM_124808.3| Arabidopsis thaliana ATM2 (ARABIDOPSIS THALIANA...
42
2.1
365 ref|NM_190738.1| Oryza sativa (japonica cultivar-group), predic...
42
2.1
366 gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete...
42
2.1
367 gb|BT012757.1| Lycopersicon esculentum clone 113701F, mRNA sequence
42
2.1
368 gb|AY171231.1| Chlamydomonas reinhardtii light-harvesting comple...
42
2.1
369 emb|BX571659.1| Wolinella succinogenes, complete genome; segment...
42
2.1
370 dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c...
42
2.1
371 gb|AF361858.1| Arabidopsis thaliana AT5g54270/MDK4_9 mRNA, compl...
42
2.1
372 gb|AY057735.1| Arabidopsis thaliana AT5g54270/MDK4_9 mRNA, compl...
42
2.1
373 gb|AF372917.1|AF372917 Arabidopsis thaliana AT5g54270/MDK4_9 mRN...
42
2.1
374 emb|BX830083.1|CNS0A1XR Arabidopsis thaliana Full-length cDNA Co...
42
2.1
375 emb|BX831139.1|CNS09ZGL Arabidopsis thaliana Full-length cDNA Co...
42
2.1
376 gb|AF134126.1| Arabidopsis thaliana chromosome V Lhcb3 protein (...
42
2.1
377 dbj|AB010695.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
42
2.1
378 emb|X61608.1|BNLHCB3A B.napus gene for LHCII Type III chlorophyl...
42
2.1
379 emb|X57082.1|PSCABII P.sativum Cab II gene for chlorophyll a/b-b...
42
2.1
380 gb|AF143691.1|AF143691 Arabidopsis thaliana type III chlorophyll...
42
2.1
381 gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete...
42
2.1
382 gb|AC102124.16| Mus musculus chromosome 18, clone RP23-188D1, co...
40
8.4
383 gb|AC120002.24| Mus musculus chromosome 12, clone RP24-147D14, c...
40
8.4
384 ref|XM_591818.2| PREDICTED: Bos taurus similar to cadherin 22 pr...
40
8.4
385 gb|AC140333.2| Mus musculus BAC clone RP24-326A21 from chromosom...
40
8.4
386 gb|AC164441.4| Mus musculus BAC clone CH25-660D15 from chromosom...
40
8.4
387 gb|AC164635.5| Mus musculus BAC clone RP23-65G17 from chromosome...
40
8.4
388 gb|AY121759.1| Micropotamogale lamottei BRCA1 gene, partial cds
40
8.4
389 gb|AC126013.12| Medicago truncatula clone mth2-32e10, complete s...
40
8.4
390 emb|AL929081.20| Human DNA sequence from clone XX-163C1 on chrom...
40
8.4
391 gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
40
8.4
392 gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, co...
40
8.4
393 gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
40
8.4
394 emb|CR555306.1| Azoarcus sp. EbN1 complete genome
40
8.4
395 emb|BX883047.1| Rattus norvegicus chromosome 20, major histocomp...
40
8.4
396 emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ...
40
8.4
397 emb|BX640431.1| Bordetella parapertussis strain 12822, complete ...
40
8.4
398 emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segmen...
40
8.4
399 gb|AC162691.2| Mus musculus chromosome 1, clone RP23-263K13, com...
40
8.4
400 gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome...
40
8.4
401 gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete se...
40
8.4
402 gb|AC118345.1| Homo sapiens BAC clone RP11-34K14 from 2, complet...
40
8.4
403 dbj|AK137282.1| Mus musculus adult male urinary bladder cDNA, RI...
40
8.4
404 gb|CP000264.1| Jannaschia sp. CCS1, complete genome
40
8.4
405 gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, comp...
40
8.4
406 gb|AC156386.7| Mus musculus chromosome 3, clone RP23-224L6, comp...
40
8.4
407 dbj|AK031262.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN...
40
8.4
408 gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
40
8.4
409 gb|AE004798.1| Pseudomonas aeruginosa PAO1, section 359 of 529 o...
40
8.4
410 gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
40
8.4
411 gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, com...
40
8.4
412 emb|X69215.1|PSLHCB31G P.sativum Lhcb3 gene for chlorophyll a/b-...
40
8.4
413 gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c...
40
8.4
414 emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...
40
8.4
415 gb|AC121544.9| Mus musculus chromosome 3, clone RP24-483I22, com...
40
8.4
416 gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosom...
40
8.4
417 emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on ch...
40
8.4
418 gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete...
40
8.4
419 gb|U41267.1|PAU41267 Pseudomonas aeruginosa cold shock protein h...
40
8.4
420 emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chrom...
40
8.4
421 gb|AC131750.3| Mus musculus BAC clone RP23-34F5 from 1, complete...
40
8.4
422 gb|AC164565.1| Mus musculus BAC clone RP23-99O13 from chromosome...
40
8.4
423 gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome...
40
8.4
424 gb|M30396.1|PMJCABF7 Polystichum munitum chlorophyll a/b-binding...
40
8.4
425 dbj|D78207.1|PHNCABBP Japanese morning glory mRNA for chlorophyl...
40
8.4
>gb| BC053854.1 | Homo sapiens cDNA clone IMAGE:5194336, partial cds
Length = 1044
Score = 424 bits (214), Expect = e-115
Identities = 331/370 (89%)
Strand = Plus / Plus
Query: 118 gaggctcgcgtcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagc 177
||||| ||||||||||||||||| || ||||| |||||||||| ||| | |||||||||
Sbjct: 148 gaggcgcgcgtcaccatgcgcaagaccgcggccaaggccaagccggtgtcgtccggcagc 207
Query: 178 ccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagc 237
||||||||||| || ||||| |||||||||||||||||||| || || || |||||||||
Sbjct: 208 ccgtggtacgggtccgaccgcgtgctctacctcggcccgctctccggcgaccccccgagc 267
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| || |||
Sbjct: 268 tacctcaccggcgagttccccggcgactacgggtgggacaccgcggggctgtcggccgac 327
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 328 cccgagaccttcgccaagaaccgggagctggaggtgatccactgccggtgggccatgctg 387
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| |||||||||||||||||||||||| |||| ||||| |||||||| |||||||| |||
Sbjct: 388 ggcgcgctcggctgcgtcttccccgagctgctcgcccgcaacggcgtcaagttcggcgag 447
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| |||||||||||||||||||||||||| |||||||| |||
Sbjct: 448 gccgtgtggttcaaggccggctcccagatcttcagcgagggcggcctcgactacctcggc 507
Query: 478 aacccaagcc 487
||||| ||||
Sbjct: 508 aaccccagcc 517
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| ||| |||||||||||
Sbjct: 757 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctctccgaccccgtc 816
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 817 aacaacaacgcctgggccttcgccaccaacttcgtgcccggca 859
>gb| U73218.1 |TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor
(Wcab) mRNA, complete cds
Length = 918
Score = 396 bits (200), Expect = e-107
Identities = 365/420 (86%)
Strand = Plus / Plus
Query: 68 cctttgccggcaaggcagtgaagaacttgccatcatcgtctgtttttggtgaggctcgcg 127
|||||||||||||||| |||||||| | ||||| | | || | || || ||||| ||||
Sbjct: 44 cctttgccggcaaggcggtgaagaatgtaccatctttggctctcttgggcgaggcccgcg 103
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
||||||||||||| || || |||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 104 tcaccatgcgcaagaccgcagcaaaggcaaagcaggtttcctccggcagcccatggtacg 163
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
| ||||||||||||||||||||||||| || || |||||||| ||||||||||||||||
Sbjct: 164 gtgctgaccgtgtgctctacctcggcccactctccggtgagcctccgagctacctgaccg 223
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
||||||||||||||||||| || |||||||||||||| | || |||||||| |||||||
Sbjct: 224 gtgagttccctggcgactatgggtgggacactgctggactttcggctgacccggagacct 283
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
|| |||||||||| |||||||||||||||||||| || |||||||||||||| || || |
Sbjct: 284 tctccaagaaccgggagctggaggtgatccactgtcgctgggccatgcttggggcacttg 343
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
| || |||||||| |||||||| ||||| |||||||| ||||| || ||||| |||||||
Sbjct: 344 gttgtgtcttccctgagttgctcgcccgcaacggcgtcaagtttggcgaggccgtttggt 403
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
|||||||||| ||||||||||| || ||||| || || |||||||| |||||||| ||||
Sbjct: 404 tcaaggccggctcccagatctttagtgagggtggtctcgactacctcggcaaccccagcc 463
Score = 153 bits (77), Expect = 8e-34
Identities = 108/117 (92%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 481 ccaagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccc 540
|||||| |||||||| |||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 699 ccaagctatcgtcacgggcaagggcccacttgagaacctcgctgaccacatcgccgaccc 758
Query: 541 cgtcaacaacaatgcatgggcattcgccaccaacttcgttcccggc-agtaaggtgt 596
|||||||||||||||||||||||||||||||||||| || |||||| ||||||||||
Sbjct: 759 cgtcaacaacaatgcatgggcattcgccaccaactttgtccccggcaagtaaggtgt 815
>emb| X89023.1 |HVLHCIITI H.vulgare mRNA for LHC II type I protein
Length = 934
Score = 355 bits (179), Expect = 1e-94
Identities = 356/415 (85%)
Strand = Plus / Plus
Query: 73 gccggcaaggcagtgaagaacttgccatcatcgtctgtttttggtgaggctcgcgtcacc 132
||||| ||||| |||||||| | |||| |||| || | || ||||||||||||||||||
Sbjct: 58 gccggaaaggcggtgaagaatgtcccattatcggctctcttcggtgaggctcgcgtcacc 117
Query: 133 atgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacggctct 192
|||||||| || ||||| || || ||||| ||| ||||| ||||||| |||||||| ||
Sbjct: 118 atgcgcaagaccgcggcgaaagctaagcaagtttcctccagcagcccatggtacggagct 177
Query: 193 gaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccggtgag 252
|| |||||||||||||||||||| || ||| | |||||||| |||||||| ||||||||
Sbjct: 178 gatcgtgtgctctacctcggcccactctctcgcgagcccccaagctacctcaccggtgat 237
Query: 253 ttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttcgcc 312
||||| || |||||||| |||||||| ||||| | ||||||||||||||||||||| |
Sbjct: 238 ttccccggtgactacgggtgggacacggctggactctctgctgaccccgagaccttctcg 297
Query: 313 aagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgc 372
|||||||||||| |||||||||| |||||||| ||||| |||||||| || || || |||
Sbjct: 298 aagaaccgcgagttggaggtgatacactgccgctgggctatgcttggtgcactgggttgc 357
Query: 373 gtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaag 432
|| ||||| |||||||| ||||| || |||||||||||||| |||||||| |||||||||
Sbjct: 358 gtgttccctgagttgcttgcccgcaatggcgtgaagttcggcgaggctgtctggttcaag 417
Query: 433 gccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||||| || || |||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 418 gccggctcgcaaatcttcagcgagggtggcctcgactacctcggcaacccaagcc 472
Score = 117 bits (59), Expect = 4e-23
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||||||||| || || ||||||||||||||||| ||||||||||||||
Sbjct: 712 gccatagtcaccggcaagggccctcttgagaacctcgctgaccacatcgccgaccccgtc 771
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || |||||||| ||||| |||||||| |||||||
Sbjct: 772 aacaacaacgcttgggcatttgccacaaacttcgtccccggca 814
>gb| M10144.1 |WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds
Length = 1191
Score = 349 bits (176), Expect = 7e-93
Identities = 359/420 (85%)
Strand = Plus / Plus
Query: 68 cctttgccggcaaggcagtgaagaacttgccatcatcgtctgtttttggtgaggctcgcg 127
|||| ||||||||||| || ||||||||||| || ||| || | ||||||| || || |
Sbjct: 235 ccttcgccggcaaggccgtcaagaacttgccctcgtcggctctcattggtgacgcacgtg 294
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
| | ||||||||| || ||||| |||||||| || ||| | || |||||||||||||||
Sbjct: 295 tgaacatgcgcaagactgcggcgaaggccaaacaagtttcgtcgagcagcccgtggtacg 354
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
|||||||||||||||||||||||||||||||||| || |||||||| |||||| |||| |
Sbjct: 355 gctctgaccgtgtgctctacctcggcccgctttccggcgagccccccagctacttgactg 414
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
|||||||||| || ||||| || |||||||| || ||| | || |||||||| |||||||
Sbjct: 415 gtgagttccccggtgactatgggtgggacaccgccgggctctcggctgaccctgagacct 474
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
||||||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |
Sbjct: 475 tcgccaagaaccgggagctcgaggtgatccactgccgatgggccatgctcggtgcgcttg 534
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
| || ||||| ||||||||||| ||||| || || ||||||||||| ||||| | |||||
Sbjct: 535 gttgtgtctttcccgagttgcttgcccgcaatggtgtgaagttcggcgaggccggttggt 594
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||||||| || || |||||||||||||| || ||||| ||||||||||||||||| ||||
Sbjct: 595 tcaaggctggctctcagatcttcagcgatggtggcctcgactaccttggcaaccccagcc 654
Score = 52.0 bits (26), Expect = 0.002
Identities = 85/102 (83%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||||||||| ||| | ||| |||| || ||||| | |||||||| |||
Sbjct: 894 gccattgtcaccggcaagggcccattggaggaccttgccgaccacattgccgaccctgtc 953
Query: 545 aacaacaatgcatgg-gcattcgccaccaacttcgttcccgg 585
|||||||| || ||| |||| |||||||||||||| |||||
Sbjct: 954 aacaacaacgcgtggctcatt-gccaccaacttcgtgcccgg 994
>emb| AJ635207.1 | Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b
binding protein (cab gene)
Length = 760
Score = 325 bits (164), Expect = 1e-85
Identities = 356/420 (84%)
Strand = Plus / Plus
Query: 68 cctttgccggcaaggcagtgaagaacttgccatcatcgtctgtttttggtgaggctcgcg 127
|||| ||||||||||| || ||||||||||| || ||| || | ||||||| || || |
Sbjct: 30 ccttcgccggcaaggccgtcaagaacttgccctcgtcggctctcattggtgacgcacgtg 89
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
| | ||||||||| || ||||| |||||||| || ||| | || |||||||||||||||
Sbjct: 90 tgaacatgcgcaagactgcggcgaaggccaaacaagtttcgtcgagcagcccgtggtacg 149
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
|||||||||||||||||||||||||| ||||||| || || ||||| |||||| |||| |
Sbjct: 150 gctctgaccgtgtgctctacctcggctcgctttccggcgaaccccccagctacttgactg 209
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
|||||||||| || ||||| || |||||||| || ||| | || |||||||| |||||||
Sbjct: 210 gtgagttccccggtgactatgggtgggacaccgccgggctctcggctgaccctgagacct 269
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
||||||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |
Sbjct: 270 tcgccaagaaccgggagctcgaggtgatccactgccgatgggccatgctcggtgcgcttg 329
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
| || ||||| ||||||||||| ||||| || || ||||||||||| ||||| || ||||
Sbjct: 330 gttgtgtctttcccgagttgcttgcccgcaatggtgtgaagttcggcgaggccgtctggt 389
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||| ||| || || ||||| ||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 390 tcatggctggctctcagattttcagcgagggtggcctcgactaccttggcaaccccagcc 449
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||||||||| ||| | |||||||| || ||||| | |||||||| |||
Sbjct: 689 gccattgtcaccggcaagggcccattggagaaccttgccgaccacattgccgaccctgtc 748
Query: 545 aacaacaa 552
||||||||
Sbjct: 749 aacaacaa 756
>emb| X14794.1 |ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein
Length = 2100
Score = 323 bits (163), Expect = 4e-85
Identities = 280/319 (87%)
Strand = Plus / Plus
Query: 169 tccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
||||||||||| ||||||||| | ||||| || ||||||||||| | || || |||
Sbjct: 1015 tccggcagcccctggtacggccccgaccgcgtcaagtacctcggccccttctccggcgag 1074
Query: 229 cccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttg 288
|||||||||||||| ||||| |||||||| ||||||||||| |||||||| || ||| ||
Sbjct: 1075 cccccgagctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctg 1134
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|| || ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 1135 tccgccgaccccgagacattcgccaagaaccgcgagctggaggtgatccactcccgctgg 1194
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|||||||| || |||||||||||||||||||||||| |||| |||| |||||||| |||
Sbjct: 1195 gccatgctcggcgcgctcggctgcgtcttccccgagctgctctcccgcaacggcgtcaag 1254
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
||||| ||||| || |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1255 ttcggcgaggccgtctggttcaaggccggctcccagatcttcagcgagggcgggctggac 1314
Query: 469 taccttggcaacccaagcc 487
||||| |||||||| ||||
Sbjct: 1315 tacctcggcaaccccagcc 1333
Score = 125 bits (63), Expect = 2e-25
Identities = 93/103 (90%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||
Sbjct: 1573 gccatcgtcaccggcaagggcccgctcgagaacctcgctgaccacatcgctgacccagtc 1632
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 1633 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 1675
>emb| Y00379.1 |ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein
LHCP
Length = 967
Score = 315 bits (159), Expect = 1e-82
Identities = 320/373 (85%), Gaps = 3/373 (0%)
Strand = Plus / Plus
Query: 118 gaggctcgcgtcaccatgcgcaaaacggcggcaaaggccaagca---ggttgcctccggc 174
||||| ||||| || |||||||| |||||||| |||||||||| || || |||||
Sbjct: 143 gaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagccagcggcggcgtccggg 202
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||| |||
Sbjct: 203 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 262
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
||||||||||| || |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 263 agctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggctgtcggcg 322
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 323 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccgctgggccatg 382
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||| ||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 383 ctgggcgcgctcggttgcgtcttcccggagcttctcgcccgcaacggcgtcaagttcggc 442
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 443 gaggccgtgtggttcaaggccggctcccagatcttcagcgagggcgggctggactacctc 502
Query: 475 ggcaacccaagcc 487
|| ||||| ||||
Sbjct: 503 gggaacccgagcc 515
Score = 117 bits (59), Expect = 4e-23
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| ||||| || |||||||||||||||||||| | ||||||||||||
Sbjct: 755 gccatcgtcaccgggaagggcccgctcgagaacctcgctgaccacattgccgaccccgtc 814
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 815 aacaacaacgcttgggcctacgccaccaacttcgtccccggca 857
>ref| NM_191799.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 798
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 139 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 198
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 199 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 258
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 259 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 318
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 319 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 378
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 379 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 438
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 439 ggcaaccccagcc 451
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 691 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 750
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 751 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 793
>gb| AY100470.1 | Oryza sativa (indica cultivar-group) putative soluble starch synthase
IV-1 gene, complete cds
Length = 15000
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Minus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 14535 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 14476
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 14475 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 14416
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 14415 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 14356
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 14355 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 14296
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 14295 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 14236
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 14235 ggcaaccccagcc 14223
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Minus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 13983 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 13924
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 13923 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 13881
>dbj| AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 30024476 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 30024535
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 30024536 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 30024595
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 30024596 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 30024655
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 30024656 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 30024715
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 30024716 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 30024775
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 30024776 ggcaaccccagcc 30024788
Score = 285 bits (144), Expect = 8e-74
Identities = 306/360 (85%)
Strand = Plus / Plus
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
||||||||||||| ||||||| ||| |||||| | || || || |||||||||||||
Sbjct: 23603623 tcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacg 23603682
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
|| | ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 23603683 gcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccg 23603742
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
| |||||||| ||||||||||| |||||||| || ||| | || || ||||| ||||| |
Sbjct: 23603743 gcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgt 23603802
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
||||||||||||| ||||||||||||||||||| | | ||||| ||||| || ||||| |
Sbjct: 23603803 tcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgg 23603862
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
||||||| ||||| ||| | || ||||| |||||||| |||||||| ||||| || ||||
Sbjct: 23603863 gctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggt 23603922
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||||||| || || |||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 23603923 tcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcc 23603982
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 30025028 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 30025087
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 30025088 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 30025130
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 23604222 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 23604281
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 23604282 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 23604324
Score = 46.1 bits (23), Expect = 0.14
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 170 ccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
|||||| ||||||||||||| | ||||| || |||||||| ||||||| || ||||||
Sbjct: 37443423 ccggcaacccgtggtacggccccgaccgcgtcatctacctccgcccgctctccggtgag 37443365
>dbj| AP003292.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0690B02
Length = 153116
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 20466 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 20525
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 20526 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 20585
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 20586 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 20645
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 20646 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 20705
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 20706 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 20765
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 20766 ggcaaccccagcc 20778
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 21018 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 21077
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 21078 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 21120
>dbj| AK104176.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full
insert sequence
Length = 1055
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 279
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 280 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 339
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 340 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 399
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 400 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 459
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 460 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 519
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 520 ggcaaccccagcc 532
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 772 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 831
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 832 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 874
>dbj| AK103946.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full
insert sequence
Length = 1055
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 279
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 280 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 339
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 340 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 399
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 400 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 459
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 460 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 519
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 520 ggcaaccccagcc 532
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 772 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 831
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 832 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 874
>dbj| AK062725.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full
insert sequence
Length = 1057
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 281
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 282 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 341
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 342 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 401
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 402 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 461
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 462 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 521
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 522 ggcaaccccagcc 534
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 774 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 833
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 834 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 876
>dbj| AK058289.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full
insert sequence
Length = 1057
Score = 311 bits (157), Expect = 1e-81
Identities = 274/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 281
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 282 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 341
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 342 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 401
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 402 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 461
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 462 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 521
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 522 ggcaaccccagcc 534
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 774 gccatcgtcaccggcaaggggccactggagaacctggccgaccacctcgccgaccccgtc 833
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 834 aacaacaacgcatgggcctacgccaccaacttcgtccccggca 876
>emb| X53398.1 |ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding
protein
Length = 2261
Score = 307 bits (155), Expect = 2e-80
Identities = 319/373 (85%), Gaps = 3/373 (0%)
Strand = Plus / Plus
Query: 118 gaggctcgcgtcaccatgcgcaaaacggcggcaaaggccaagca---ggttgcctccggc 174
||||| ||||| || |||||||| |||||||| |||||||||| || || |||||
Sbjct: 1091 gaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagccagcggcggcgtccggg 1150
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||| |||
Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 1210
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
||||||||||| || |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 1211 agctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggctgtcggcg 1270
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 1271 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccgctgggccatg 1330
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||| ||||||||||| ||| |||| ||||| |||||||| ||||||||
Sbjct: 1331 ctgggcgcgctcggttgcgtcttcccggagctgctcgcccgcaacggcgtcaagttcggc 1390
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| ||| ||||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct: 1391 gaggccgttgggttcaaggccggctcccagatcttcagcgagggtggactggactacctc 1450
Query: 475 ggcaacccaagcc 487
|| ||||| ||||
Sbjct: 1451 gggaacccgagcc 1463
Score = 117 bits (59), Expect = 4e-23
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| ||||| || |||||||||||||||||||| | ||||||||||||
Sbjct: 1703 gccatcgtcaccgggaagggcccgctcgagaacctcgctgaccacattgccgaccccgtc 1762
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 1763 aacaacaacgcttgggcctacgccaccaacttcgtccccggca 1805
>emb| X55892.1 |ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding
protein
Length = 869
Score = 307 bits (155), Expect = 2e-80
Identities = 319/373 (85%), Gaps = 3/373 (0%)
Strand = Plus / Plus
Query: 118 gaggctcgcgtcaccatgcgcaaaacggcggcaaaggccaagcaggttgc---ctccggc 174
||||| ||||| || |||||||| |||||||| ||||| |||| || || |||||||
Sbjct: 91 gaggcccgcgtgacgatgcgcaagacggcggcgaaggcaaagccggcggcgagctccggc 150
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| ||||||||||| ||||| || || || |||||||||
Sbjct: 151 agcccgtggtacggccccgaccgcgtgctctacctgggcccactgtccggcgagcccccg 210
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
||||||||||| || |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 211 agctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggctgtcggcg 270
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||| ||||||| ||| |||||||||
Sbjct: 271 gacccggagacgttcgccaagaaccgggagctggaggtcatccactcccgctgggccatg 330
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || ||| | |||||||| ||||| ||| |||| ||||| |||||||| ||||||||
Sbjct: 331 ctgggcgcgttgggctgcgtgttcccggagctgctcgcccgcaacggcgtcaagttcggc 390
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || |||||||||||||| || ||||||||||||||||| || |||||||||||
Sbjct: 391 gaggccgtgtggttcaaggccgggtcgcagatcttcagcgagggtgggctggactacctc 450
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 451 ggcaacccgagcc 463
Score = 125 bits (63), Expect = 2e-25
Identities = 93/103 (90%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 703 gccatcgtcaccggcaagggcccgctcgagaacctcgccgaccacctcgccgaccccgtc 762
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | ||||||||||| || |||||||
Sbjct: 763 aacaacaacgcatgggcctatgccaccaactttgtgcccggca 805
>gb| U74295.1 |OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA,
complete cds
Length = 1022
Score = 303 bits (153), Expect = 4e-79
Identities = 273/313 (87%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| |||||||||||||||||||| || || ||||| |||
Sbjct: 181 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 240
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||||| | ||||||||||| |||||||| || ||| |||| ||
Sbjct: 241 tcctacctcaccggcgagttctccggcgactacggctgggacaccgccgggctgtcggcc 300
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 301 gacccggagacgttcgccaagaaccgggagctggaggtgatccactgccggtgggccatg 360
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||||||||||||
Sbjct: 361 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccgcaacggcgtgaagttcggc 420
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 421 gaggccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctc 480
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 481 ggcaaccccagcc 493
Score = 117 bits (59), Expect = 4e-23
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||||| |||||| || | ||||| |||||||||||||||
Sbjct: 733 gccatcgtcaccggcaaggggccactggagaacatcacagaccacctcgccgaccccgtc 792
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| |||||||| | |||||||||||| || |||||||
Sbjct: 793 aacaacaacgcatgggcctacgccaccaactttgtccccggca 835
>dbj| AP008215.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 287 bits (145), Expect = 2e-74
Identities = 271/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 10793123 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 10793182
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 10793183 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 10793242
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 10793243 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 10793302
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 10793303 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 10793362
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 10793363 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 10793422
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 10793423 ggcaacccgagcc 10793435
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 10793675 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 10793734
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 10793735 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 10793777
>dbj| AP005313.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0512H04
Length = 151049
Score = 287 bits (145), Expect = 2e-74
Identities = 271/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 16846 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 16905
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 16906 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 16965
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 16966 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 17025
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 17026 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 17085
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 17086 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 17145
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 17146 ggcaacccgagcc 17158
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 17398 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 17457
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 17458 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 17500
>dbj| AP005700.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OSJNBb0085I16
Length = 141701
Score = 287 bits (145), Expect = 2e-74
Identities = 271/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 129741 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 129800
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 129801 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 129860
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 129861 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 129920
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 129921 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 129980
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 129981 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 130040
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 130041 ggcaacccgagcc 130053
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 130293 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 130352
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 130353 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 130395
>dbj| AK104350.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full
insert sequence
Length = 1013
Score = 287 bits (145), Expect = 2e-74
Identities = 271/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 191 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 250
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 251 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 310
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 311 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 370
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 371 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 430
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 431 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 490
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 491 ggcaacccgagcc 503
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 743 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 802
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 803 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 845
>dbj| AK104288.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full
insert sequence
Length = 1021
Score = 287 bits (145), Expect = 2e-74
Identities = 271/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 315
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 316 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 375
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 376 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 435
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 436 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 495
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 496 ggcaacccgagcc 508
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 748 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 807
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 808 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 850
>dbj| AK104281.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full
insert sequence
Length = 1056
Score = 287 bits (145), Expect = 2e-74
Identities = 271/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 198 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 257
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 258 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 317
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 318 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 377
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 378 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 437
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 438 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 497
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 498 ggcaacccgagcc 510
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 750 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 809
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 810 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 852
>dbj| AK060851.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full
insert sequence
Length = 1235
Score = 287 bits (145), Expect = 2e-74
Identities = 271/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 315
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 316 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 375
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 376 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 435
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 436 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 495
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 496 ggcaacccgagcc 508
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 748 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 807
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 808 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 850
>ref| NM_192636.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 789
Score = 285 bits (144), Expect = 8e-74
Identities = 306/360 (85%)
Strand = Plus / Plus
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
||||||||||||| ||||||| ||| |||||| | || || || |||||||||||||
Sbjct: 80 tcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacg 139
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
|| | ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 140 gcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccg 199
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
| |||||||| ||||||||||| |||||||| || ||| | || || ||||| ||||| |
Sbjct: 200 gcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgt 259
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
||||||||||||| ||||||||||||||||||| | | ||||| ||||| || ||||| |
Sbjct: 260 tcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgg 319
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
||||||| ||||| ||| | || ||||| |||||||| |||||||| ||||| || ||||
Sbjct: 320 gctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggt 379
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||||||| || || |||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 380 tcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcc 439
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 679 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 738
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 739 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 781
>dbj| AP003278.5 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0518F01
Length = 154541
Score = 285 bits (144), Expect = 8e-74
Identities = 306/360 (85%)
Strand = Plus / Plus
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
||||||||||||| ||||||| ||| |||||| | || || || |||||||||||||
Sbjct: 66322 tcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacg 66381
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
|| | ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 66382 gcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccg 66441
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
| |||||||| ||||||||||| |||||||| || ||| | || || ||||| ||||| |
Sbjct: 66442 gcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgt 66501
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
||||||||||||| ||||||||||||||||||| | | ||||| ||||| || ||||| |
Sbjct: 66502 tcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgg 66561
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
||||||| ||||| ||| | || ||||| |||||||| |||||||| ||||| || ||||
Sbjct: 66562 gctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggt 66621
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||||||| || || |||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 66622 tcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcc 66681
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 66921 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 66980
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 66981 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 67023
>dbj| AK121563.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full
insert sequence
Length = 1180
Score = 285 bits (144), Expect = 8e-74
Identities = 306/360 (85%)
Strand = Plus / Plus
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
||||||||||||| ||||||| ||| |||||| | || || || |||||||||||||
Sbjct: 151 tcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacg 210
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
|| | ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 211 gcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccg 270
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
| |||||||| ||||||||||| |||||||| || ||| | || || ||||| ||||| |
Sbjct: 271 gcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgt 330
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
||||||||||||| ||||||||||||||||||| | | ||||| ||||| || ||||| |
Sbjct: 331 tcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgg 390
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
||||||| ||||| ||| | || ||||| |||||||| |||||||| ||||| || ||||
Sbjct: 391 gctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggt 450
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||||||| || || |||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 451 tcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcc 510
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 750 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 809
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 810 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 852
>dbj| AK119173.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full
insert sequence
Length = 1126
Score = 285 bits (144), Expect = 8e-74
Identities = 306/360 (85%)
Strand = Plus / Plus
Query: 128 tcaccatgcgcaaaacggcggcaaaggccaagcaggttgcctccggcagcccgtggtacg 187
||||||||||||| ||||||| ||| |||||| | || || || |||||||||||||
Sbjct: 150 tcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacg 209
Query: 188 gctctgaccgtgtgctctacctcggcccgctttctggtgagcccccgagctacctgaccg 247
|| | ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 210 gcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccg 269
Query: 248 gtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagacct 307
| |||||||| ||||||||||| |||||||| || ||| | || || ||||| ||||| |
Sbjct: 270 gcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgt 329
Query: 308 tcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcg 367
||||||||||||| ||||||||||||||||||| | | ||||| ||||| || ||||| |
Sbjct: 330 tcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgg 389
Query: 368 gctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggt 427
||||||| ||||| ||| | || ||||| |||||||| |||||||| ||||| || ||||
Sbjct: 390 gctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggt 449
Query: 428 tcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
||||||| || || |||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 450 tcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcc 509
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 749 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 808
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 809 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 851
>dbj| AK058305.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full
insert sequence
Length = 1045
Score = 280 bits (141), Expect = 5e-72
Identities = 270/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 315
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| ||||||||||||| ||||||||||||||||||| ||| ||||| |||
Sbjct: 316 gacccggagacgctcgccaagaaccgggagctggaggtgatccactcccggtgggcgatg 375
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 376 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 435
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 436 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 495
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 496 ggcaacccgagcc 508
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 748 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 807
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 808 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 850
>dbj| D00641.1 |RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I
light-harvesting chlorophyll a/b binding protein of
photosystem II (LHCPII), complete cds
Length = 1022
Score = 280 bits (141), Expect = 5e-72
Identities = 270/313 (86%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| || ||||||||||||||||| || || ||||| |||
Sbjct: 177 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 236
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | || ||
Sbjct: 237 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 296
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||| ||||||||| ||| ||||| |||
Sbjct: 297 gacccggagacgttcgccaagaaccgggagctggagctgatccactcccgatgggcgatg 356
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||||
Sbjct: 357 ctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttcggc 416
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
||||| || ||||||||||| || || |||||||||||||||||||| || ||||||||
Sbjct: 417 gaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctc 476
Query: 475 ggcaacccaagcc 487
|||||||| ||||
Sbjct: 477 ggcaacccgagcc 489
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 729 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 788
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 789 aacaacaacgcctgggcgtacgccaccaacttcgtccccggca 831
>gb| AY389606.1 | Hyacinthus orientalis chloroplast chlorophyll A-B binding protein
40 mRNA, complete cds
Length = 859
Score = 276 bits (139), Expect = 8e-71
Identities = 274/319 (85%)
Strand = Plus / Plus
Query: 169 tccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
||||||||||||||||||||| | |||||||| |||||||||||| | || || |||
Sbjct: 190 tccggcagcccgtggtacggcccggaccgtgtcaagtacctcggcccgttctccggcgag 249
Query: 229 cccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttg 288
|||| ||||| ||||| || ||||| ||||||||||| |||||||| || ||| |
Sbjct: 250 gccccatcatacctcaccggcgaattccccggcgactacgggtgggacaccgccgggctc 309
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|| || ||||||||||||||| |||||||||| ||||| ||||||||||||||||| |||
Sbjct: 310 tccgccgaccccgagaccttctccaagaaccgggagctcgaggtgatccactgccggtgg 369
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|||||||| || || ||||||||||||||||||||| | || ||||| ||||||||||||
Sbjct: 370 gccatgctgggtgctctcggctgcgtcttccccgagctcctcgcccgcaacggcgtgaag 429
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
||||| ||||| || ||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 430 ttcggcgaggcggtctggttcaaggccggagcccagatcttcagcgagggcggattggac 489
Query: 469 taccttggcaacccaagcc 487
||||| |||||||| ||||
Sbjct: 490 tacctgggcaaccccagcc 508
>emb| X13908.1 |OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding
protein
Length = 1664
Score = 266 bits (134), Expect = 8e-68
Identities = 271/316 (85%), Gaps = 3/316 (0%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggt---gagccc 231
||||||||||||||| | ||||| || ||||||||||||||||| || || |||||
Sbjct: 585 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcgggccgcgagccg 644
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| ||||||||||| |||||||| || ||| | ||
Sbjct: 645 ccgagctacctcaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 704
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|| ||||| ||||| |||||||||||||| ||||||||||||||||||| ||| |||||
Sbjct: 705 gccgacccggagacgttcgccaagaaccgggagctggaggtgatccactcccggtgggcg 764
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| || |||||||||||||||||||| ||| | || ||||| |||||||| ||||||
Sbjct: 765 atgctgggcgcgctcggctgcgtcttcccggagctcctcgcccggaacggcgtcaagttc 824
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactac 471
|| ||||| || ||||||||||| || || |||||||||||||||||||| || ||||||
Sbjct: 825 ggcgaggccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactac 884
Query: 472 cttggcaacccaagcc 487
|| |||||||| ||||
Sbjct: 885 ctcggcaacccgagcc 900
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 1140 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 1199
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 1200 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 1242
>gb| AY389573.1 | Hyacinthus orientalis chloroplast chlorophyll A-B binding protein
40 (LHCP) mRNA, partial cds
Length = 712
Score = 260 bits (131), Expect = 5e-66
Identities = 272/319 (85%)
Strand = Plus / Plus
Query: 169 tccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
||||||||||| ||||||||| | |||||||| |||||||||||| | || ||||||
Sbjct: 94 tccggcagcccctggtacggcccggaccgtgtcaagtacctcggcccgttctccggtgag 153
Query: 229 cccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttg 288
| || ||||| |||||||||||||| ||||||||||| |||||||| || ||| |
Sbjct: 154 gcaccatcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggctc 213
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|| || ||||||||||| || ||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 214 tccgcggaccccgagacatttgccaagaaccgggagctcgaggtgatccactgccggtgg 273
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|| ||||| || || ||||||||||||||||||||| | || ||||| ||||| ||||||
Sbjct: 274 gcaatgctgggtgctctcggctgcgtcttccccgagctccttgcccgcaacggtgtgaag 333
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
||||| ||||| || ||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 334 ttcggcgaggcggtatggttcaaggccggatctcagatcttcagcgagggcgggctggac 393
Query: 469 taccttggcaacccaagcc 487
||||| || ||||| ||||
Sbjct: 394 tacctgggaaaccctagcc 412
>gb| AY389553.1 | Hyacinthus orientalis chloroplast chlorophyll A-B binding protein
(CAB) mRNA, partial cds
Length = 720
Score = 260 bits (131), Expect = 5e-66
Identities = 272/319 (85%)
Strand = Plus / Plus
Query: 169 tccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
||||||||||||||||||||| | || ||||| |||||||||||| | || ||||||
Sbjct: 174 tccggcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgag 233
Query: 229 cccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttg 288
| || ||||| |||||||||||||| ||||||||||| |||||||| || ||| |
Sbjct: 234 gcaccatcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggctc 293
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|| || ||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||
Sbjct: 294 tcagcggaccccgagacattcgccaagaaccgggagctcgaggtgatccactgcaggtgg 353
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|| ||||| || || ||||||||||||||||||||| | || ||||| ||||||||||||
Sbjct: 354 gcaatgctgggcgctctcggctgcgtcttccccgagctcctcgcccgcaacggcgtgaag 413
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
||||| ||||| || |||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 414 ttcggcgaggcggtctggttcaaggccggcgcccagatcttcagcgagggcggattggac 473
Query: 469 taccttggcaacccaagcc 487
||||| |||||||| ||||
Sbjct: 474 tacctgggcaaccctagcc 492
>gb| AY389549.1 | Hyacinthus orientalis chloroplast chlorophyll A-B binding protein
3C (LHCP) mRNA, partial cds
Length = 661
Score = 260 bits (131), Expect = 5e-66
Identities = 272/319 (85%)
Strand = Plus / Plus
Query: 169 tccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
||||||||||||||||||||| | || ||||| |||||||||||| | || ||||||
Sbjct: 9 tccggcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgag 68
Query: 229 cccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttg 288
| || ||||| |||||||||||||| ||||||||||| |||||||| || ||| |
Sbjct: 69 gcaccatcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggctc 128
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|| || ||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||
Sbjct: 129 tcagcggaccccgagacattcgccaagaaccgggagctcgaggtgatccactgcaggtgg 188
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|| ||||| || || ||||||||||||||||||||| | || ||||| ||||||||||||
Sbjct: 189 gcaatgctgggcgctctcggctgcgtcttccccgagctcctcgcccgcaacggcgtgaag 248
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
||||| ||||| || |||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 249 ttcggcgaggcggtctggttcaaggccggcgcccagatcttcagcgagggcggattggac 308
Query: 469 taccttggcaacccaagcc 487
||||| |||||||| ||||
Sbjct: 309 tacctgggcaaccctagcc 327
Score = 71.9 bits (36), Expect = 2e-09
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||| || |||||||| ||||| |||||| | || || || || ||||| |||||||||
Sbjct: 570 atcgtgacgggcaaggggccactggagaacttggccgatcaccttgccgatcccgtcaac 629
Query: 548 aacaatgcatgggcattcgccaccaacttcgt 579
|||||||| ||||| || ||||||||||||||
Sbjct: 630 aacaatgcctgggcgtttgccaccaacttcgt 661
>gb| AY109324.1 | Zea mays CL187_1 mRNA sequence
Length = 2262
Score = 258 bits (130), Expect = 2e-65
Identities = 273/320 (85%), Gaps = 3/320 (0%)
Strand = Plus / Plus
Query: 118 gaggctcgcgtcaccatgcgcaaaacggcggcaaaggccaagca---ggttgcctccggc 174
||||| ||||| || |||||||| |||||||| |||||||||| || || |||||
Sbjct: 1091 gaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagccagcggcggcgtccggg 1150
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgagcccccg 234
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||| |||
Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 1210
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
||||||||||| || |||||||| ||||||||||| |||||||| || ||| |||| ||
Sbjct: 1211 agctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggctgtcggcg 1270
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||| ||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 1271 gacccggagacgttcgccaagaaccgggagctggaggtgatccactcccgctgggccatg 1330
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| || |||||||||||||||||||| ||| |||| ||||| |||||||| ||||||||
Sbjct: 1331 ctgggcgcgctcggctgcgtcttcccggagctgctcgcccgcaacggcgtcaagttcggc 1390
Query: 415 gaggctgtttggttcaaggc 434
||||| ||| ||||||||||
Sbjct: 1391 gaggccgttgggttcaaggc 1410
Score = 117 bits (59), Expect = 4e-23
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| ||||| || |||||||||||||||||||| | ||||||||||||
Sbjct: 1703 gccatcgtcaccgggaagggcccgctcgagaacctcgctgaccacattgccgaccccgtc 1762
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 1763 aacaacaacgcttgggcctacgccaccaacttcgtccccggca 1805
>dbj| AB211497.1 | Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds
Length = 695
Score = 250 bits (126), Expect = 5e-63
Identities = 219/250 (87%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| ||||| |||||| | ||||||||||| |||||||| || ||| | || || |||
Sbjct: 113 tacctcaccggcgagttcgccggcgactacggctgggacaccgccgggctctccgccgac 172
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 173 cccgagaccttcgccaagaaccgcgagctggaggtgatccacgcgaggtgggccatgctc 232
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| |||||||||||||||||||||||| |||| ||||| |||||||| |||||||| |||
Sbjct: 233 ggcgcgctcggctgcgtcttccccgagctgctcgcccgcaacggcgtcaagttcggcgag 292
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 293 gccgtctggttcaaggccggctcccagatcttcagcgagggcgggctcgactacctcggg 352
Query: 478 aacccaagcc 487
||||| ||||
Sbjct: 353 aaccccagcc 362
Score = 99.6 bits (50), Expect = 1e-17
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||| ||||||||||| || ||||||||| | || ||||| ||||| |||||||||
Sbjct: 602 gccatcgtgaccggcaagggacccctcgagaacttggccgaccacctcgctgaccccgtc 661
Query: 545 aacaacaatgcatgggcattcgccaccaacttcg 578
|||||||| || ||||| ||||||||||||||||
Sbjct: 662 aacaacaacgcctgggccttcgccaccaacttcg 695
>emb| X13909.1 |OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding
protein
Length = 1442
Score = 250 bits (126), Expect = 5e-63
Identities = 269/316 (85%), Gaps = 3/316 (0%)
Strand = Plus / Plus
Query: 175 agcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggt---gagccc 231
||||||||||||||| | ||||| |||||||||||||||||||| || || |||||
Sbjct: 624 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggccgcgagccg 683
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||||||||| |||||||| ||||||||||| |||||||| || ||| | ||
Sbjct: 684 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 743
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|| ||||| ||||| |||||||||||||| ||||||||||||||||||| | | |||||
Sbjct: 744 gccgacccggagacgttcgccaagaaccgggagctggaggtgatccactccaggtgggcg 803
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| || | ||| |||||||| ||||| ||| | || ||||| |||||||| ||||||
Sbjct: 804 atgctcggcgggctgggctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttc 863
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactac 471
|| ||||| || ||||||||||| || || |||||||||||||||||||| || ||||||
Sbjct: 864 ggggaggcggtgtggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactac 923
Query: 472 cttggcaacccaagcc 487
|| |||||||| ||||
Sbjct: 924 ctcggcaacccgagcc 939
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 1179 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 1238
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 1239 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 1281
>emb| AJ843976.1 | Plantago major partial mRNA for light harvesting protein 1 (lhc1
gene)
Length = 688
Score = 246 bits (124), Expect = 7e-62
Identities = 229/264 (86%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||| ||||||||||| |||||||||||||||| || |||||||| ||||||||||||
Sbjct: 79 ggtgagtccccgagctacttgaccggtgagttccccggtgactacggctgggacactgct 138
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || |||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 139 ggactctcagctgacccagagaccttcgccaagaaccgtgagcttgaggtgatccactca 198
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||||||||| ||||| ||||| ||||||||| | ||||||| |||||
Sbjct: 199 agatgggccatgcttggagcactcggatgcgtattccccgagctcttggcccgtaacggt 258
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
|| |||||||| |||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct: 259 gtcaagttcggcgaggctgtttggttcaaggctggatcacagatctttagcgagggtggt 318
Query: 463 ctggactaccttggcaacccaagc 486
|||||||| | || |||||||||
Sbjct: 319 ttggactacttgggaaacccaagc 342
Score = 61.9 bits (31), Expect = 2e-06
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| ||||| || | |||||||| |||||||| || || |||||||| |||
Sbjct: 586 atcgtcaccggaaagggcccgttggagaaccttgctgaccacctagcagaccccgttaac 645
Query: 548 aacaatgcatggg-cattcgccaccaacttcgttcccgg 585
||||| || |||| | || ||||| ||||||||||||||
Sbjct: 646 aacaacgcttgggccttttgccacaaacttcgttcccgg 684
>emb| X12981.1 |GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein
Length = 1361
Score = 238 bits (120), Expect = 2e-59
Identities = 231/268 (86%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||| ||||||||| |||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 428 tctggcgagcccccgtcctacctaaccggtgagttcccaggcgactacggctgggacact 487
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|||||| | || || ||||| || ||||||||||||||||| || || || |||||||||
Sbjct: 488 gctgggctttccgcagacccagaaaccttcgccaagaaccgtgaactcgaagtgatccac 547
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | | ||||||||||| ||||| | |||||||||||||| ||||||||| |||| |||
Sbjct: 548 tccaggtgggccatgctcggagccttgggctgcgtcttcccggagttgctgtcccgcaac 607
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| ||||||||||| || || || |||||||||||||| ||||||||||||||||||||
Sbjct: 608 ggggtgaagttcggagaagccgtgtggttcaaggccgggtcccagatcttcagcgagggt 667
Query: 460 ggcctggactaccttggcaacccaagcc 487
|| || |||||| | |||||||||||||
Sbjct: 668 gggctcgactacttgggcaacccaagcc 695
Score = 58.0 bits (29), Expect = 4e-05
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||||||| | ||||||||||| || || || || | || |||
Sbjct: 935 gccattgtcaccggaaagggtccattggagaacctcgccgatcaccttgctggacctgtc 994
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|||||||| || ||||| | |||||||||||||| |||||
Sbjct: 995 aacaacaacgcctgggcctatgccaccaacttcgtccccgg 1035
>gb| M29334.1 |LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds
Length = 1633
Score = 228 bits (115), Expect = 2e-56
Identities = 217/251 (86%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||||||||| |||||| | ||||||||||| |||||||| || ||| | || || ||
Sbjct: 598 ctacctgaccggcgagttcgccggcgactacggctgggacaccgccgggctctcggccga 657
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|||||||||||||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 658 ccccgagaccttcgccaagaaccgggagctggaggtgatccacgcgcggtgggccatgct 717
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| ||||| |||||||| ||||| ||| ||||||| || |||||||||||||| || ||
Sbjct: 718 cggcgcgctgggctgcgtgttcccggagctgctggcgcgcaacggcgtgaagtttggcga 777
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| || || ||||||||||||||||| || ||||||||||| ||
Sbjct: 778 ggccgtgtggttcaaggcgggttcgcagatcttcagcgagggggggctggactacctggg 837
Query: 477 caacccaagcc 487
|||||| ||||
Sbjct: 838 caaccccagcc 848
Score = 125 bits (63), Expect = 2e-25
Identities = 93/103 (90%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| ||||| || ||||||||| | || |||||||||||||||||||||
Sbjct: 1088 gccatcgtcaccgggaagggccccctcgagaacttggcggaccatctcgccgaccccgtc 1147
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 1148 aacaacaacgcctgggccttcgccaccaacttcgtccccggca 1190
>emb| X63205.1 |ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor
Length = 2780
Score = 226 bits (114), Expect = 7e-56
Identities = 249/294 (84%)
Strand = Plus / Plus
Query: 168 ctccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtga 227
|||||||||||| |||||||| | ||||| || || ||||| |||||||| || ||
Sbjct: 2055 ctccggcagcccctggtacggtgccgaccgcgtcctgtacctgggcccgctgtccggctc 2114
Query: 228 gcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggtt 287
|| ||||||||||||||||| |||||||| ||||||||||| |||||||| | ||| |
Sbjct: 2115 acctccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgaggggct 2174
Query: 288 gtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttg 347
||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2175 gtcggcggacccggagaccttcgccaagaaccgcgagctggaggtgatccactgccgctg 2234
Query: 348 ggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaa 407
|||||| | || |||||| ||||| ||||| ||| |||| ||||| |||||||| ||
Sbjct: 2235 ggccatcgcggtagggctcgggtgcgtgttcccggagctgctcgcccgcaacggcgtcaa 2294
Query: 408 gttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcgg 461
|||||| |||| || ||||||||||| || |||||||||||||||||||||||
Sbjct: 2295 gttcggcgagggggtgtggttcaaggcgggctcccagatcttcagcgagggcgg 2348
Score = 111 bits (56), Expect = 3e-21
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||||||||| || ||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 2617 atcgtcaccggcaagggccccatcgagaacctcgccgaccacctcaccgaccccgtcaac 2676
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccggca 587
||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 2677 aacaacgcctgggcttacgccaccaacttcgtccccggca 2716
>gb| AY198376.1 | Citrus limon chlorophyll a/b-binding protein precursor, gene,
partial cds; nuclear gene for chloroplast product
Length = 647
Score = 204 bits (103), Expect = 2e-49
Identities = 226/267 (84%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctggcgagcccccaagctacttgaccggtgagttccctggcgactacggttgggacaca 240
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|| ||| | || |||||||| || ||||| |||||||| || || || || || ||||||
Sbjct: 241 gccgggctttcagctgacccagaaacctttgccaagaatcgtgaactcgaagtcatccac 300
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||||||| | ||||| || || ||||||||||| ||| | ||||||| |||
Sbjct: 301 tgcagatgggccatgttgggagctcttggatgcgtcttcccggagctcttggcccgcaac 360
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || |||||||||||||| || ||||||||||| ||| | ||||||||||||||||||
Sbjct: 361 ggagtcaagttcggtgaggccgtgtggttcaaggcgggagctcagatcttcagcgagggc 420
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | || |||||||||
Sbjct: 421 gggcttgactacttgggaaacccaagc 447
>gb| U21111.1 |STU21111 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-1) gene,
nuclear gene encoding chloroplast protein, complete cds
Length = 798
Score = 204 bits (103), Expect = 2e-49
Identities = 226/267 (84%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||||||||| |||||||| |||||||| ||||| ||
Sbjct: 184 tctggtgagtccccaagctacttgaccggtgaattccctggtgactacgggtgggatacc 243
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || ||||| ||||||||||| || || ||||||||||||
Sbjct: 244 gctggactttcagcagaccctgaaacctttgccaagaaccgtgaactcgaggtgatccac 303
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | || |||| |||
Sbjct: 304 tgcagatgggcaatgcttggtgctcttggatgtgtcttccctgagctattgtcccgtaac 363
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtgtcaagttcggtgaggctgtgtggttcaaggccggatcccagatcttcagcgaggga 423
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | ||||||||||||
Sbjct: 424 ggacttgactacttgggcaacccaagc 450
>dbj| AP004473.1 | Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007,
complete sequence
Length = 92741
Score = 200 bits (101), Expect = 4e-48
Identities = 224/265 (84%)
Strand = Plus / Minus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||||||| |||| |||||||||||||||| || |||||||| ||||||||||||
Sbjct: 66170 ggtgagcccccgtcctacttgaccggtgagttccccggtgactacggctgggacactgct 66111
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
||| | ||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 66110 gggctttctgctgaccccgagacattcgccaagaaccgtgagcttgaggtgatccactct 66051
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||| | ||||| | ||||| || ||||| ||| | ||||||| |||||
Sbjct: 66050 aggtgggccatgttgggagctttgggctgtgttttcccagagctcttggcccgcaacggg 65991
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
|| || |||||||||||||| ||||||||||| || || || |||||||||||||| ||
Sbjct: 65990 gttaaattcggtgaggctgtgtggttcaaggctgggtcacaaatcttcagcgagggtggg 65931
Query: 463 ctggactaccttggcaacccaagcc 487
|| |||||| | |||||||| ||||
Sbjct: 65930 cttgactacttgggcaacccgagcc 65906
>gb| U21114.1 |STU21114 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-5) gene,
nuclear gene encoding chloroplast protein, complete cds
Length = 798
Score = 196 bits (99), Expect = 6e-47
Identities = 225/267 (84%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||||||||| |||||||| |||||||| ||||| ||
Sbjct: 184 tctggtgagtccccaagctacttgaccggtgaattccctggtgactacgggtgggatacc 243
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || ||||| ||||||||||| || || ||||||||||||
Sbjct: 244 gctggactttcagcagaccctgaaacctttgccaagaaccgtgaactcgaggtgatccac 303
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | ||||||| |||
Sbjct: 304 tgcagatgggcaatgcttggtgctcttggatgtgtcttccctgagctattggcccgtaac 363
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtgtcaagttcggtgaggtcgtgtggttcaaggccggatcccagatcttcagcgagggt 423
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | ||||||||||||
Sbjct: 424 ggacttgactacttgggcaacccaagc 450
>gb| U20983.1 |STU20983 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene,
nuclear gene encoding chloroplast protein, complete cds
Length = 798
Score = 196 bits (99), Expect = 6e-47
Identities = 225/267 (84%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| || ||| |||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 184 tctggtgagtccccaagttacttgactggtgaattccctggtgactatggatgggatacc 243
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| |||||||| ||||||||||| || || ||||||||||||
Sbjct: 244 gctggactttcagcagaccctgagacctttgccaagaaccgtgaacttgaggtgatccac 303
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | ||||||| |||
Sbjct: 304 tgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctcttggcccgtaac 363
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtgtcaagttcggtgaggctgtgtggttcaaggccggatcccagatcttcagcgagggt 423
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | ||||||||||||
Sbjct: 424 ggacttgactacttgggcaacccaagc 450
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||| || ||||| ||||||||| | ||||| || |||||||| || || || ||
Sbjct: 688 caagccattgttaccggaaagggtccattggagaatcttgctgaccaccttgcagatcca 747
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|||||||||||||||||||| || ||||| ||||| ||||||||
Sbjct: 748 gtcaacaacaatgcatgggcctttgccacaaactttgttcccgg 791
>gb| M16058.1 |CUSLHCPB Cucumber LHCP mRNA encoding chlorophyll a/b-binding protein,
partial cds
Length = 748
Score = 196 bits (99), Expect = 6e-47
Identities = 222/263 (84%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||||| || |||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 9 tctggtgagccaccatcctaccttaccggagagttccctggtgactacggttgggacact 68
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| ||||||||||||||||||||||| ||| |||| |||||||||
Sbjct: 69 gctggactttcagctgatcccgagaccttcgccaagaaccgagagttggaagtgatccac 128
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | ||||||||||||||||| | || || || ||||| ||| | || | || ||
Sbjct: 129 tccacatgggccatgcttggagctttggggtgtgttttccctgagcttttgtctcgcaat 188
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 189 ggtgtgaagtttggtgaggctgtttggttcaaggctggatctcagatcttcagcgagggc 248
Query: 460 ggcctggactaccttggcaaccc 482
|| || |||||| | ||||||||
Sbjct: 249 gggcttgactacttgggcaaccc 271
Score = 52.0 bits (26), Expect = 0.002
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 536 gaccccgtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||| |||||||||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 567 gacccagtcaacaacaatgcttgggcatatgccacaaactttgttcccgg 616
>gb| AF139467.2 |AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein
(CipLhcb1) mRNA, complete cds; nuclear gene for
chloroplast product
Length = 975
Score = 192 bits (97), Expect = 9e-46
Identities = 274/333 (82%)
Strand = Plus / Plus
Query: 155 ccaagcaggttgcctccggcagcccgtggtacggctctgaccgtgtgctctacctcggcc 214
||||||||||| ||||||| ||||| ||||||||| | |||||||| ||| | ||||
Sbjct: 171 ccaagcaggtttcctccggaagcccatggtacggcccagaccgtgtcaagtacttgggcc 230
Query: 215 cgctttctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttggg 274
| | || || ||||||||| |||||| ||||| |||||||| || |||||||||||||
Sbjct: 231 cattctccggcgagcccccgtcctacctcaccggcgagttcccaggtgactacggttggg 290
Query: 275 acactgctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtga 334
||||||||||| | || |||||||| ||||||||||||| |||||| ||| |||| || |
Sbjct: 291 acactgctgggctttccgctgacccagagaccttcgccaggaaccgtgagttggaagtca 350
Query: 335 tccactgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggccc 394
|||||| | | ||||||||||| ||||| | ||| |||||||||||| || |||
Sbjct: 351 tccactccaggtgggccatgctgggagccttgggcatcgtcttccccgaacccttgtccc 410
Query: 395 gaaacggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcg 454
| ||||| ||||| ||||| ||||| || |||||||| ||||| ||||||||||||||||
Sbjct: 411 gcaacggtgtgaaattcggcgaggccgtctggttcaaagccggttcccagatcttcagcg 470
Query: 455 agggcggcctggactaccttggcaacccaagcc 487
|||| || || |||||| | |||||||||||||
Sbjct: 471 agggtgggctcgactacttgggcaacccaagcc 503
Score = 81.8 bits (41), Expect = 2e-12
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| ||| | ||||||||||| ||||| || || ||||| |||
Sbjct: 743 gccattgtcaccggaaagggaccattggagaacctcgccgaccaccttgctgacccagtc 802
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|||||||| || ||||| | ||||||||||||||| |||||
Sbjct: 803 aacaacaacgcctgggcctacgccaccaacttcgtccccgg 843
>gb| AF034631.1 |AF034631 Panax ginseng chlorophyll a/b binding protein of LHCII type I
precursor (CAB) mRNA, nuclear gene encoding chloroplast
protein, complete cds
Length = 1015
Score = 192 bits (97), Expect = 9e-46
Identities = 211/249 (84%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| || |||||||| || || || |||||||||||||||||||| | ||||||||
Sbjct: 228 tacctcactggtgagtttccaggtgattacggttgggacactgctggcctttctgctgat 287
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|||||||| |||||||||||||| ||||| |||||||| ||| || | ||||||||||||
Sbjct: 288 cccgagacattcgccaagaaccgtgagcttgaggtgattcacagcagatgggccatgctt 347
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| || || || |||||||||||| | |||| || ||||| || || |||||||||
Sbjct: 348 ggagcccttggatgtgtcttccccgagctcttggctcgtaacggtgtcaaattcggtgag 407
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||||||||| ||||||||||| || || || |||||| | |||
Sbjct: 408 gccgtgtggttcaaggccggatcccaaatcttcagcgaaggtgggcttgactacttgggc 467
Query: 478 aacccaagc 486
|||||||||
Sbjct: 468 aacccaagc 476
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| | ||||||||||| || |||||
Sbjct: 777 aacaacaatgcatgggcctatgccaccaactttgtccccgg 817
>gb| M12152.1 |LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds
Length = 1913
Score = 192 bits (97), Expect = 9e-46
Identities = 208/245 (84%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||| || |||||||| ||||||||||| |||||||| || || | || || |||
Sbjct: 938 tacctgacgggcgagttccccggcgactacgggtgggacacggccggcctctccgccgac 997
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||
Sbjct: 998 ccggagaccttcgccaagaaccgcgagctggaggtcatccacagccggtgggccatgctc 1057
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| |||||||||||| ||||||| ||| |||| || ||||| ||| ||||||| |||
Sbjct: 1058 ggcgcgctcggctgcatcttcccggagctgctctccaagaacggggtgcagttcggggag 1117
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || ||||||||||| || ||||||||||| |||||||||||| |||||||| |||
Sbjct: 1118 gccgtctggttcaaggcgggcgcccagatcttctccgagggcggcctcgactacctgggc 1177
Query: 478 aaccc 482
|||||
Sbjct: 1178 aaccc 1182
Score = 101 bits (51), Expect = 3e-18
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||| || ||||| ||||||||||||||
Sbjct: 1427 gccatcgtcaccggcaagggccccatcgagaacctggccgaccacatcgccgaccccgtc 1486
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 1487 gccaacaacgcctgggccttcgccaccaacttcgtccccggca 1529
>emb| X02356.1 |PECAB91R Petunia gene for chlorophyll a/b binding protein cab 91R
Length = 1173
Score = 190 bits (96), Expect = 4e-45
Identities = 216/256 (84%)
Strand = Plus / Plus
Query: 230 ccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgt 289
|||| |||||| ||||||||||||||||||| ||||| ||||||||||| |||| | |
Sbjct: 430 ccccaagctacttgaccggtgagttccctggtgactatggttgggacaccgctgaacttt 489
Query: 290 ctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttggg 349
| ||||| ||||| || |||||||||||||| ||| ||||||||||||||||| | ||||
Sbjct: 490 cagctgatcccgaaacattcgccaagaaccgtgagttggaggtgatccactgcagatggg 549
Query: 350 ccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagt 409
||||||||||||| || || || |||||||| || | || ||||| || || || ||||
Sbjct: 550 ccatgcttggagctcttggttgtgtcttccctgaactccttgcccgtaatggtgtcaagt 609
Query: 410 tcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggact 469
||||||||||||| ||||| ||||| |||||||| || ||||||||||| || || ||||
Sbjct: 610 tcggtgaggctgtatggtttaaggctggatcccaaatattcagcgagggtggacttgact 669
Query: 470 accttggcaacccaag 485
|| | |||||||||||
Sbjct: 670 acttgggcaacccaag 685
>gb| U21113.1 |STU21113 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-4) gene,
nuclear gene encoding chloroplast protein, complete cds
Length = 798
Score = 188 bits (95), Expect = 1e-44
Identities = 224/267 (83%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| || ||| |||||||||| |||||||| ||||| || ||||| |||
Sbjct: 184 tctggtgagtccccaagttacttgaccggtgaattccctggtgactatggctgggatact 243
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || ||||| ||||||||||| || || ||||||||||||
Sbjct: 244 gctggactttcagcagaccctgaaacctttgccaagaaccgtgaactagaggtgatccac 303
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | ||||||| |||
Sbjct: 304 tgcaggtgggctatgcttggtgctcttggatgtgtcttccctgagctcttggcccgtaac 363
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtgtcaagtttggtgaggctgtgtggttcaaggccggatcccagatcttcagcgagggt 423
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | || |||||||||
Sbjct: 424 ggacttgactacttggggaacccaagc 450
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| || ||||| ||||||||| | |||||||| |||||||| || || ||||||||
Sbjct: 691 gccattgttaccggaaagggtccattggagaaccttgctgaccaccttgcagaccccgtt 750
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcc 582
||||||||||| ||||| | |||||| ||||| |||||
Sbjct: 751 aacaacaatgcctgggcctacgccacaaactttgttcc 788
>gb| L23107.1 |GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding
protein mRNA, complete cds
Length = 997
Score = 186 bits (94), Expect = 6e-44
Identities = 193/226 (85%)
Strand = Plus / Plus
Query: 262 gactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaaccgc 321
|||||||| |||||||| || ||| |||| || ||||| ||||| ||||| |||||| |
Sbjct: 299 gactacgggtgggacacggcggggctgtcggcggacccggagacgttcgcgaagaacaga 358
Query: 322 gagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttcccc 381
||||||||||||||||||| || ||||| ||| | ||||| || ||||||||||||||
Sbjct: 359 gagctggaggtgatccactcgcggtgggcgatgttgggagccctgggctgcgtcttcccg 418
Query: 382 gagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccggatcc 441
||| |||| |||| |||||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 419 gagctgctctcccgcaacggcgtcaagttcggcgaggctgtctggttcaaggcgggctct 478
Query: 442 cagatcttcagcgagggcggcctggactaccttggcaacccaagcc 487
|||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 479 cagatcttcagcgacggcggcctcgactacctgggcaacccaagcc 524
Score = 125 bits (63), Expect = 2e-25
Identities = 93/103 (90%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||||||||||||||| || || ||||||||||||| ||||| |||||||||||||||
Sbjct: 764 gccatcgtcaccggcaaaggccccatcgagaacctcgccgaccacctcgccgaccccgtc 823
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 824 aacaacaacgcctgggccttcgccaccaacttcgtccccggca 866
>gb| M16057.1 |CUSLHCPA Cucumber LHCP mRNA encoding chlorophyll a/b-binding protein,
partial cds
Length = 878
Score = 186 bits (94), Expect = 6e-44
Identities = 259/314 (82%)
Strand = Plus / Plus
Query: 169 tccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
||||||||||||||||| || |||||||||| ||| | ||||| | |||||||||
Sbjct: 103 tccggcagcccgtggtatggtcctgaccgtgtcaagtacttgggcccattctctggtgag 162
Query: 229 cccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttg 288
|| || |||||| ||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 163 ccaccatcctaccttaccggagagttccctggtgactacggttgggacactgctggactt 222
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|| ||||| ||||||||||||||||||||||| ||| |||| |||||||||| | | |||
Sbjct: 223 tcagctgatcccgagaccttcgccaagaaccgtgagttggaagtgatccactccagatgg 282
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|||||||||||||| | || || || ||||| ||| | || | || || || ||||||
Sbjct: 283 gccatgcttggagctttggggtgtgttttccctgagcttttgtctcgtaatggtgtgaag 342
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
|| ||||| ||||| ||||||||||| || || |||||||||||||||||||| || |||
Sbjct: 343 tttggtgaagctgtgtggttcaaggctggttcgcagatcttcagcgagggcgggcttgac 402
Query: 469 taccttggcaaccc 482
||| | ||||||||
Sbjct: 403 tacttgggcaaccc 416
Score = 52.0 bits (26), Expect = 0.002
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||| ||||| ||||||||| | ||||| | ||||| ||||| || ||||| ||||||
Sbjct: 664 atcgttaccggaaagggtccattggagaatttggctgatcatcttgctgacccagtcaac 723
Query: 548 aacaatgcatgggc 561
|||||||| |||||
Sbjct: 724 aacaatgcttgggc 737
>dbj| D14002.1 |LAUCAB Lettuce mRNA for light-harvesting chlorophyll a/b-binding protein
(LHCP), complete cds
Length = 905
Score = 180 bits (91), Expect = 4e-42
Identities = 184/215 (85%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||||||||| ||||| || |||||||| |||||||| || || | ||||||||
Sbjct: 249 tacctgaccggtgaattcccaggtgactacggctgggacaccgccggactttctgctgat 308
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| || |||||||||| ||||| ||||| ||||||||| | ||||| ||||||
Sbjct: 309 ccagagacattttccaagaaccgtgagcttgaggtcatccactgcagatgggcaatgctt 368
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| || |||||||||||||| ||| | ||||||| || || |||||||||||||||
Sbjct: 369 ggagctcttggctgcgtcttccctgagctcttggcccgtaatggtgtgaagttcggtgag 428
Query: 418 gctgtttggttcaaggccggatcccagatcttcag 452
||||| ||||||||||| |||||||||||||||||
Sbjct: 429 gctgtatggttcaaggctggatcccagatcttcag 463
>emb| X12735.1 |HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b-
binding protein ( LHCP )
Length = 1030
Score = 178 bits (90), Expect = 1e-41
Identities = 207/246 (84%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||||||||| |||||||| || |||||||| |||||||| || ||| | || ||
Sbjct: 378 ctacctgaccggcgagttccccggagactacgggtgggacacggccgggctcagcgccga 437
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||||||||||||||||||||||||||||||||||||||||||| | || ||||| |||||
Sbjct: 438 ccccgagaccttcgccaagaaccgcgagctggaggtgatccacgggcgctgggcgatgct 497
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| |||||||| ||||||||||| ||| | || ||||| |||||||| ||||| || ||
Sbjct: 498 gggggcgctcgggtgcgtcttcccggagctcctcgcccggaacggcgtcaagtttggcga 557
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||| || ||||||||||| ||||||||||| ||| | ||||| ||
Sbjct: 558 ggccgtgtggttcaagaagggttcccagatctttagcgagggcgggctgcagtacctggg 617
Query: 477 caaccc 482
|||||
Sbjct: 618 gaaccc 623
Score = 125 bits (63), Expect = 2e-25
Identities = 93/103 (90%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| ||||| || ||||||||| | || ||||||||||||||||||||
Sbjct: 868 gccatcgtcaccgggaaggggcccctcgagaacttggcggaccatctcgccgaccccgta 927
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 928 aacaacaatgcctgggccttcgccaccaacttcgtccccggca 970
>dbj| AB012641.1 | Nicotiana sylvestris Lhcb1*9 gene for light harvesting chlorophyll
a/b-binding protein, complete cds
Length = 3386
Score = 178 bits (90), Expect = 1e-41
Identities = 222/266 (83%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||| |||||||||||||| || || || |||||||||
Sbjct: 1640 tctggtgagtccccaagctacttgacgggtgagttccctggtgattatggatgggacact 1699
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || || || |||||||| ||| |||||||||||||
Sbjct: 1700 gctggactttcagctgatccagaaacttttgctaagaaccgtgagttggaggtgatccat 1759
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||||||||||||||| || || || ||||||||||| | |||| || |||
Sbjct: 1760 tgcagatgggccatgcttggagctcttggttgtgtcttccccgaactcttggctcgtaac 1819
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 1820 ggagtcaagttcggtgaggctgtatggttcaaggctggatcccagattttcagcgaaggt 1879
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 1880 ggacttgactacttgggcaacccaag 1905
>ref| NM_001036402.1 | Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant
AT2G34410.3 mRNA, complete cds
Length = 3299
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Minus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 3057 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 2998
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 2997 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 2938
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 2937 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 2878
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 2877 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 2818
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 2817 gactacttgggcaaccc 2801
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 2595 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 2536
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 2535 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 2492
>ref| NM_001036401.1 | Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant
AT2G34410.2 mRNA, complete cds
Length = 3338
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Minus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 3096 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 3037
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 3036 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 2977
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 2976 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 2917
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 2916 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 2857
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 2856 gactacttgggcaaccc 2840
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 2595 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 2536
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 2535 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 2492
>ref| NM_128994.2 | Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2)
transcript variant AT2G34420.1 mRNA, complete cds
Length = 1354
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 242 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 301
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 302 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 361
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 362 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 421
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 422 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 481
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 482 gactacttgggcaaccc 498
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 743 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 802
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 803 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 846
>ref| NM_179900.1 | Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant
AT2G34420.2 mRNA, complete cds
Length = 1312
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 242 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 301
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 302 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 361
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 362 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 421
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 422 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 481
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 482 gactacttgggcaaccc 498
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 701 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 760
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 761 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 804
>gb| AY142513.1 | Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
binding protein (At2g34420) mRNA, complete cds
Length = 829
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 187 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 246
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 247 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 306
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 307 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 366
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 367 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 426
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 427 gactacttgggcaaccc 443
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 688 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 747
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 748 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 791
>gb| AY045806.1 | Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
binding protein (At2g34420) mRNA, complete cds
Length = 1015
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 242 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 301
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 302 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 361
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 362 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 421
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 422 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 481
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 482 gactacttgggcaaccc 498
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 743 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 802
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 803 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 846
>gb| AC004481.3 | Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete
sequence
Length = 112763
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Minus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 93814 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 93755
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 93754 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 93695
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 93694 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 93635
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 93634 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 93575
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 93574 gactacttgggcaaccc 93558
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 95491 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 95550
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 95551 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 95610
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 95611 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 95670
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 95671 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 95730
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 95731 ttggactacttgggcaaccc 95750
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 93313 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 93254
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 93253 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 93210
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 95998 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 96057
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 96058 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 96098
>gb| AC004077.3 | Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete
sequence
Length = 93060
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 80388 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 80447
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 80448 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 80507
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 80508 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 80567
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 80568 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 80627
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 80628 gactacttgggcaaccc 80644
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Minus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 78711 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 78652
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 78651 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 78592
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 78591 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 78532
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 78531 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 78472
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 78471 ttggactacttgggcaaccc 78452
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 80889 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 80948
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 80949 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 80992
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 78204 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 78145
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 78144 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 78104
>gb| AY081587.1 | Arabidopsis thaliana photosystem II type I chlorophyll a/b binding
protein (At2g34420) mRNA, complete cds
Length = 883
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 187 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 246
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 247 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 306
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 307 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 366
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 367 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 426
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 427 gactacttgggcaaccc 443
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 688 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 747
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 748 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 791
>gb| AY079110.1 | Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
Length = 798
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 187 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 246
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 247 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 306
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 307 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 366
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 367 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 426
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 427 gactacttgggcaaccc 443
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 688 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 747
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 748 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 791
>gb| AY079101.1 | Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
Length = 798
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 187 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 246
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 247 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 306
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 307 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 366
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 367 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 426
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 427 gactacttgggcaaccc 443
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 688 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 747
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 748 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 791
>gb| AY065125.1 | Arabidopsis thaliana photosystem II type I chlorophyll a/b binding
protein (At2g34420; T31E10.24) mRNA, complete cds
Length = 969
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 238 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 297
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 298 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 357
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 358 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 417
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 418 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 477
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 478 gactacttgggcaaccc 494
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 739 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 798
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 799 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 842
>gb| AF419587.1 |AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
Length = 969
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 238 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 297
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 298 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 357
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 358 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 417
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 418 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 477
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 478 gactacttgggcaaccc 494
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 739 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 798
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 799 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 842
>gb| AF419548.1 |AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
Length = 969
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 238 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 297
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 298 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 357
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 358 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 417
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 418 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 477
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 478 gactacttgggcaaccc 494
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 739 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 798
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 799 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 842
>gb| AF428397.1 |AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
Length = 1024
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 238 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 297
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 298 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 357
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 358 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 417
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 418 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 477
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 478 gactacttgggcaaccc 494
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 739 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 798
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 799 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 842
>gb| AY039561.1 | Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
Length = 995
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 238 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 297
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 298 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 357
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 358 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 417
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 418 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 477
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 478 gactacttgggcaaccc 494
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 739 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 798
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 799 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 842
>gb| AF372886.1 |AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
Length = 969
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 238 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 297
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 298 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 357
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 358 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 417
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 418 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 477
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 478 gactacttgggcaaccc 494
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 739 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 798
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 799 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 842
>emb| BX820019.1 |CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS62ZC05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 903
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 219 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 278
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 279 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 338
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 339 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 398
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 399 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 458
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 459 gactacttgggcaaccc 475
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 720 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 779
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 780 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 823
>emb| BX820007.1 |CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS5ZF09 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 885
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 222 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 281
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 282 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 341
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 342 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 401
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 402 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 461
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 462 gactacttgggcaaccc 478
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 723 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 782
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 783 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 826
>emb| X64460.1 |ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding
protein
Length = 1405
Score = 176 bits (89), Expect = 6e-41
Identities = 215/257 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 487 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 546
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 547 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 606
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 607 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 666
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 667 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 726
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 727 gactacttgggcaaccc 743
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 988 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 1047
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1048 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 1091
>gb| AF162200.1 |AF162200 Lactuca sativa light-harvesting chlorophyll a/b binding protein
mRNA, complete sequence; nuclear gene for chloroplast
product
Length = 643
Score = 174 bits (88), Expect = 2e-40
Identities = 181/212 (85%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||||| |||||| || |||||||||||||||||||||||| | ||||||||
Sbjct: 33 tacctgaccggtgggttccccggtgactacggttgggacactgctgggctctctgctgat 92
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| || || |||||||||||||| ||||| ||||| |||||| || | |||||||||||
Sbjct: 93 cctgaaacattcgccaagaaccgtgagcttgaggtcatccacagcagatgggccatgctc 152
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| || || |||||||||||||| | |||| || || || || ||||| ||||||
Sbjct: 153 ggagctcttgggtgcgtcttccccgaactcttggcgcgtaatggtgtcaagtttggtgag 212
Query: 418 gctgtttggttcaaggccggatcccagatctt 449
||||| ||||||||||| ||||||||||||||
Sbjct: 213 gctgtatggttcaaggctggatcccagatctt 244
Score = 46.1 bits (23), Expect = 0.14
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgacca 528
|||||||| || ||||| ||||| ||| | |||||||||||||||||
Sbjct: 520 caagccattgttaccggaaagggaccattggagaacctcgctgacca 566
>gb| AF003129.1 |AF003129 Mesembryanthemum crystallinum chlorophyll a/b-binding protein
(CAB3) mRNA, nuclear gene encoding chloroplast protein,
complete cds
Length = 1011
Score = 174 bits (88), Expect = 2e-40
Identities = 208/248 (83%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| || ||||| |||||||| ||||| |||||||||||||||||| | || ||||||
Sbjct: 264 tacctcactggtgaattccctggtgactatggttgggacactgctgggctctcagctgac 323
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|||||||| || || |||||||| ||||| |||||||||||||| | ||||||||| |
Sbjct: 324 cccgagacttttgctaagaaccgtgagcttgaggtgatccactgtaggtgggccatgtta 383
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| || || || |||||||| ||| | ||||||| ||||| || || |||||||||
Sbjct: 384 ggagctctaggatgtgtcttcccagagctcttggcccgcaacggtgtcaaattcggtgag 443
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
||||||||||||||||| ||| |||| ||||| || ||||| || || |||||| | |||
Sbjct: 444 gctgtttggttcaaggctggagcccaaatctttagtgagggtggactcgactacttgggc 503
Query: 478 aacccaag 485
||||||||
Sbjct: 504 aacccaag 511
Score = 85.7 bits (43), Expect = 2e-13
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 481 ccaagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccc 540
||||||||| || ||||| ||||||||| | |||||||||||||| ||||| || |||||
Sbjct: 749 ccaagccattgtgaccggaaagggtccattggagaacctcgctgatcatcttgcagaccc 808
Query: 541 cgtcaacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|| ||||||||||| ||||| ||||| || ||||| | ||||||||
Sbjct: 809 agttaacaacaatgcttgggccttcgctacaaactttgctcccggca 855
>emb| BX814757.1 |CNS0AEAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB92ZG04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 409
Score = 170 bits (86), Expect = 3e-39
Identities = 194/230 (84%)
Strand = Plus / Minus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 231 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 172
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 171 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 112
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 111 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 52
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|||||||| || || ||||||||||||||||| || ||||||||||||||
Sbjct: 51 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcga 2
>emb| X02359.1 |PECAB22L Petunia gene for chlorophyll a/b binding protein cab 22L
Length = 1187
Score = 170 bits (86), Expect = 3e-39
Identities = 221/266 (83%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||| |||||||||||||| || || || |||||||||
Sbjct: 420 tctggtgaggccccaagctacttgactggtgagttccctggtgattatgggtgggacact 479
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || ||||||||||| || ||| ||||||||||||||
Sbjct: 480 gctggactttcagctgatccagaaactttcgccaagaatcgtgagttggaggtgatccac 539
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||||||||||||||| || || ||||||||||| ||| | | ||||| |||
Sbjct: 540 tgcagatgggccatgcttggagctcttggttgcgtcttccctgagctttttgcccgtaac 599
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| ||||||||||| ||| ||||||| ||||| || || ||||| |||||
Sbjct: 600 ggtgtcaagtttggtgaggctgtatggctcaaggctggatcacaaattttcagtgagggt 659
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 660 ggacttgactacttgggcaacccaag 685
>emb| X52741.1 |NTCAB16 Tabacco Cab16 mRNA for major chlorophyll a/b binding protein
Length = 1025
Score = 170 bits (86), Expect = 3e-39
Identities = 221/266 (83%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| | || |||||| |||| |||||||| ||||| || ||||| |||||||||
Sbjct: 245 tctggtgagtctccaagctacttgactggtgagtttcctggtgattacgggtgggacact 304
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || |||||||||||||| ||| ||||||||||||||
Sbjct: 305 gctggactttcagctgatccagaaacattcgccaagaaccgtgagttggaggtgatccac 364
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||||||||||||||| || || || ||||||||||| | |||| || ||
Sbjct: 365 tgcagatgggccatgcttggagctcttggttgtgtcttccccgaactcttggcacgtaat 424
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||| ||||| ||||||||||| |||||||| || || ||||||||
Sbjct: 425 ggtgtcaagttcggtgaagctgtatggttcaaggctggatcccaaatttttagcgagggt 484
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 485 ggacttgactacttgggcaacccaag 510
Score = 60.0 bits (30), Expect = 9e-06
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| ||||||||| | |||||||| |||||||| || || ||||| || |||
Sbjct: 755 atcgtcaccggaaagggtccattggagaaccttgctgaccaccttgctgacccggttaac 814
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||| || ||| | | ||||| ||||| ||||||||
Sbjct: 815 aacaacgcctggtcttatgccactaactttgttcccgg 852
>gb| DQ252493.1 | Solanum tuberosum clone 062G02 chlorophyll a-b binding protein
3C-like mRNA, complete cds
Length = 1055
Score = 170 bits (86), Expect = 3e-39
Identities = 221/266 (83%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
|||||||| |||| |||||| |||| |||||||| ||||| |||||||| |||||||||
Sbjct: 225 tctggtgaagccccaagctacttgactggtgagtttcctggtgactacggatgggacact 284
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || |||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 285 gctggactttcagctgaccctgaaacattcgctaagaaccgtgagcttgaggtgatccac 344
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | |||||||||||||| || || || || |||||||| ||| | ||||||| ||
Sbjct: 345 tgcagatgggccatgcttggtgctcttggatgtgtcttccctgagcttttggcccgtaat 404
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| || || ||||| ||||||||||| |||||||| || |||||||||||
Sbjct: 405 ggtgtcaagtttggcgaagctgtatggttcaaggctggatcccaaattttcagcgagggt 464
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 465 ggacttgactacttgggcaacccaag 490
>dbj| AB012638.1 | Nicotiana sylvestris Lhcb1*5, Lhcb1*6 genes for light harvesting
chlorophyll a/b-binding protein, complete cds
Length = 7299
Score = 170 bits (86), Expect = 3e-39
Identities = 221/266 (83%)
Strand = Plus / Minus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| | || |||||| |||| |||||||| || || ||||| || |||||||||
Sbjct: 2484 tctggtgagtctccaagctacttgactggtgagtttccaggtgactatggatgggacact 2425
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || || ||||||||||| ||| ||||||||||||||
Sbjct: 2424 gctggactttcagctgatccagaaacttttgccaagaaccgtgagttggaggtgatccac 2365
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||||||||||||||| || || || |||||||||||| | |||| || |||
Sbjct: 2364 tgcagatgggccatgcttggagctcttggttgtgtcttccccgagctcttggcacgtaac 2305
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || |||||||| || ||||| ||||||||||| || |||||||| |||||||||||
Sbjct: 2304 ggtgtcaagttcggagaagctgtatggttcaaggctggttcccagattttcagcgagggt 2245
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 2244 ggtcttgactacttgggcaacccaag 2219
Score = 139 bits (70), Expect = 1e-29
Identities = 217/266 (81%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| | || |||||| |||| ||||| |||||||| |||||||| |||||||||
Sbjct: 4549 tctggtgagtctccaagctacttgactggtgaattccctggtgactacgggtgggacact 4608
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || || || |||||||| ||| ||||||||||||||
Sbjct: 4609 gctggactttcagctgatccagaaacttttgctaagaaccgtgagttggaggtgatccac 4668
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| ||||||||||| || || || |||||||||||| | ||||||| ||
Sbjct: 4669 tgcagatgggcaatgcttggagctcttggttgtgtcttccccgagctcttggcccgtaat 4728
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| || ||||| || ||||||||||| ||||| || || ||||| || ||
Sbjct: 4729 ggtgttaagtttggcgaggccgtatggttcaaggctggatctcaaattttcagtgaaggt 4788
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 4789 ggacttgactacttgggcaacccaag 4814
Score = 71.9 bits (36), Expect = 2e-09
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| ||||||||||| ||||||||| | |||||||| || |||||||| || |||||
Sbjct: 1980 caagctatcgtcaccggaaagggtccattggagaaccttgccgaccatcttgctgaccca 1921
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| || ||||| | ||||| ||||| ||||||||
Sbjct: 1920 gttaacaacaacgcttgggcctatgccacaaactttgttcccgg 1877
Score = 67.9 bits (34), Expect = 4e-08
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| || |||||| | |||||||| || ||||| || || ||||| || |||
Sbjct: 5059 atcgtcaccggaaaaggtccattggagaaccttgccgaccaccttgctgacccagttaac 5118
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccgg 585
|||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 5119 aacaatgcctgggcatatgccactaactttgttcccgg 5156
>emb| BX822910.1 |CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB71ZG07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 919
Score = 168 bits (85), Expect = 1e-38
Identities = 214/257 (83%)
Strand = Plus / Minus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 697 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 638
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| | |||| ||||| || || |||||| || |
Sbjct: 637 ctatccgccgacccagagaccttcgccagggaccgtgagctagaagttatccacagcaga 578
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 577 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 518
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 517 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 458
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 457 gactacttgggcaaccc 441
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 196 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 137
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 136 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 93
>emb| X02358.1 |PECAB25 Petunia gene for chlorophyll a/b binding protein cab 25
Length = 1184
Score = 167 bits (84), Expect = 5e-38
Identities = 222/268 (82%)
Strand = Plus / Plus
Query: 218 tttctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggaca 277
||||||||||| |||| |||||| |||| |||||||| ||||| ||||| || ||||| |
Sbjct: 415 tttctggtgaggccccaagctacttgactggtgagtttcctggtgactatgggtgggata 474
Query: 278 ctgctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatcc 337
||||||| | || || ||||| || || |||||||||||||| ||| ||||||||||||
Sbjct: 475 ctgctggactttcagcagacccagaaactttcgccaagaaccgggagttggaggtgatcc 534
Query: 338 actgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaa 397
||||| | ||||||||||||||||| || || ||||||||||| ||| | | ||||| |
Sbjct: 535 actgcagatgggccatgcttggagctcttggttgcgtcttccctgagctctttgcccgta 594
Query: 398 acggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagg 457
| || || ||||||||||| ||||| ||||||||||| ||||| || || ||||| || |
Sbjct: 595 atggtgtcaagttcggtgaagctgtatggttcaaggctggatctcaaattttcagtgaag 654
Query: 458 gcggcctggactaccttggcaacccaag 485
| || || |||||| | |||||||||||
Sbjct: 655 gtggacttgactacttgggcaacccaag 682
Score = 71.9 bits (36), Expect = 2e-09
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| || ||||| || || |||||| | |||||||||||||| || || || ||||||
Sbjct: 921 caagctattgtcactggaaaaggtccattggagaacctcgctgatcaccttgctgacccc 980
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| ||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 981 gttaacaacaatgcgtgggcctttgccacaaactttgttcccgg 1024
>gb| U39475.1 |GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear
gene encoding chloroplast protein, complete cds
Length = 977
Score = 167 bits (84), Expect = 5e-38
Identities = 222/268 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||| ||||||||| |||||| || || |||||||| || |||||||| |||||||||
Sbjct: 209 tctggcgagcccccgtcctacctcactggcgagttcccaggtgactacggctgggacact 268
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|||||| | || || ||||| || |||||||||| |||| ||||| || |||||||||
Sbjct: 269 gctgggctttcggccgacccagaaaccttcgccagaaaccctgagctcgaagtgatccac 328
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | | ||||||||||| || || | ||||||||||||||||| | || |||| |||
Sbjct: 329 tccaggtgggccatgctcggggccttgggctgcgtcttccccgaactattgtcccgcaac 388
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| || || ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 389 ggggtcaagtttggagaagctgtgtggttcaaggccgggtcccagatcttcagcgagggt 448
Query: 460 ggcctggactaccttggcaacccaagcc 487
|| ||||||||| | |||||||||||||
Sbjct: 449 gggctggactacttgggcaacccaagcc 476
Score = 93.7 bits (47), Expect = 7e-16
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||||||| | |||||||| ||||| || || || ||||| |||
Sbjct: 716 gccattgtcaccggtaagggtccattggagaaccttgctgatcaccttgcggacccagtc 775
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
||||||||||| ||||| | ||||||||||||||| |||||||
Sbjct: 776 aacaacaatgcctgggcctacgccaccaacttcgtccccggca 818
>gb| BT014208.1 | Lycopersicon esculentum clone 133385R, mRNA sequence
Length = 958
Score = 165 bits (83), Expect = 2e-37
Identities = 221/267 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||||||||| || ||||| || ||||| ||||| ||
Sbjct: 228 tctggtgagtccccaagctacttgaccggtgaatttcctggtgattacgggtgggatacc 287
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || || || ||||||||||| || || ||||||||||||
Sbjct: 288 gctggactttcagcagaccctgaaacttttgccaagaaccgtgaacttgaggtgatccac 347
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | ||||||| ||
Sbjct: 348 tgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctcttggcccgtaat 407
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 408 ggtgtcaagttcggtgaggctgtgtggttcaaggccggatcccagatcttcagtgaaggt 467
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | ||||||||||||
Sbjct: 468 ggacttgactacttgggcaacccaagc 494
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| || |||||||| ||||||||| | |||||||| |||||||| || || ||||||
Sbjct: 732 caagctattgtcaccggaaagggtccattggagaaccttgctgaccaccttgcagacccc 791
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| ||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 792 gtaaacaacaatgcctgggctttcgccacaaactttgtccccgg 835
>emb| AJ318069.1 |STU318069 Solanum tuberosum mRNA for ferredoxin-thioredoxin-reductase
catalytic subunit B (ftrbpot gene)
Length = 701
Score = 165 bits (83), Expect = 2e-37
Identities = 223/267 (83%), Gaps = 2/267 (0%)
Strand = Plus / Minus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||||||||| |||||||| |||||||| ||||| ||
Sbjct: 609 tctggtgagtccccaagctacttgaccggtgaattccctggtgactacgggtgggatacc 550
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || ||||| ||||||||||| || || ||||||||||||
Sbjct: 549 gctggactttcagcagaccctgaaacctttgccaagaaccgtgaactcgaggtgatccac 490
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||| | |||||||| || || | || |||||||| ||| | ||||||| ||
Sbjct: 489 tgcagatgg-ctatgcttggtgctcttga-tgtgtcttccctgagctattggcccgtaat 432
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 431 ggtgtcaagttcggtgaggctgtgtggttcaaggccggatcccacatcttcagcgagggt 372
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | ||||||||||||
Sbjct: 371 ggacttgactacttgggcaacccaagc 345
>emb| X52744.1 |NTCAB40 Tabacco Cab40 mRNA for major chlorophyll a/b binding protein
Length = 1080
Score = 163 bits (82), Expect = 8e-37
Identities = 220/266 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||| |||||||||||||| |||||||| |||||||||
Sbjct: 253 tctggtgagtccccaagctacttgactggtgagttccctggtgactacgggtgggacact 312
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || || |||||||| || ||| ||||||||||||||
Sbjct: 313 gctggactttcagctgatccagaaacttttgccaagaatcgtgagttggaggtgatccac 372
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||||||||||||||| || || || |||||||| ||| | |||| || |||
Sbjct: 373 tgcagatgggccatgcttggagctcttggttgtgtcttccctgagctcttggcacgtaac 432
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| || |||||||| ||||||||||| ||||| || || || ||||||||
Sbjct: 433 ggtgtcaagtttggcgaggctgtatggttcaaggctggatctcaaatttttagcgagggt 492
Query: 460 ggcctggactaccttggcaacccaag 485
|| || ||||| | |||||||||||
Sbjct: 493 ggacttgactatttgggcaacccaag 518
Score = 60.0 bits (30), Expect = 9e-06
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
|||||||| || ||||||||| | |||||||| || ||||| || || ||||| || |||
Sbjct: 763 atcgtcactggaaagggtccattggagaaccttgccgaccaccttgcagacccagttaac 822
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccgg 585
|||||||| ||||| | ||||| ||||| ||||||||
Sbjct: 823 aacaatgcctgggcctatgccacaaactttgttcccgg 860
>gb| AF003127.1 |AF003127 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB)
mRNA, nuclear gene encoding chloroplast protein,
complete cds
Length = 1042
Score = 163 bits (82), Expect = 8e-37
Identities = 208/250 (83%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||| || ||||| |||||||| |||||||| |||||||||||||| | ||||||||
Sbjct: 231 ctacctcactggtgaattccctggtgactacgggtgggacactgctggactctctgctga 290
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| |||||||| || ||||||||||| || ||||||||||||||| | ||||| ||| |
Sbjct: 291 cccagagacctttgctaagaaccgcgaacttgaggtgatccactgcagatgggctatgtt 350
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || || |||||||| ||| | |||| || ||||| || |||||||||||
Sbjct: 351 gggtgctctgggatgtgtcttcccagagctcttggctcgcaacggtgtcaagttcggtga 410
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || |||||||||||||| | || |||||||| ||||| ||||| |||||| | ||
Sbjct: 411 ggccgtatggttcaaggccggtgcacaaatcttcagtgagggtggccttgactacttggg 470
Query: 477 caacccaagc 486
||||||||||
Sbjct: 471 caacccaagc 480
Score = 101 bits (51), Expect = 3e-18
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 481 ccaagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccc 540
||||||||| || || || ||||| ||| | ||||||||||| ||||| || || |||||
Sbjct: 717 ccaagccattgtgactggaaagggcccattggagaacctcgcagaccaccttgctgaccc 776
Query: 541 cgtcaacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 777 agtcaacaacaatgcttgggccttcgccaccaacttcgttcccggca 823
>gb| M21398.1 |TOBCABB Tobacco chlorophyll a/b-binding protein (Cab-E) gene, complete cds
Length = 1815
Score = 163 bits (82), Expect = 8e-37
Identities = 220/266 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| | || |||||| |||| |||||||| ||||| || ||||| |||||||||
Sbjct: 1165 tctggtgagtctccaagctacttgactggtgagtttcctggtgattacgggtgggacact 1224
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|| || | || ||||| || || || |||||||||||||| ||| ||||||||||||||
Sbjct: 1225 gccggactttcagctgatccagaaacattcgccaagaaccgtgagttggaggtgatccac 1284
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||||||||||||||| || || || ||||||||||| | |||| || ||
Sbjct: 1285 tgcagatgggccatgcttggagctcttggttgtgtcttccccgaactcttggcacgtaat 1344
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||| ||||| ||||||||||| |||||||| || || ||||||||
Sbjct: 1345 ggtgtcaagttcggtgaagctgtatggttcaaggctggatcccaaatttttagcgagggt 1404
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 1405 ggacttgactacttgggcaacccaag 1430
>gb| M21397.1 |TOBCABA Tobacco chlorophyll a/b-binding protein (Cab-C) gene, complete cds
Length = 1240
Score = 163 bits (82), Expect = 8e-37
Identities = 220/266 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| | || |||||| |||| |||||||||||||| ||||| || ||||| |||
Sbjct: 626 tctggtgagtctccaagctacttgactggtgagttccctggtgactatggatgggatact 685
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || || ||||||||||| ||| ||||||||||||||
Sbjct: 686 gctggactttcagctgatcctgaaacttttgccaagaaccgtgagttggaggtgatccac 745
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
|| | ||||||||||||||||| || || || ||||| |||||| | ||||||| ||
Sbjct: 746 tgtagatgggccatgcttggagctcttggttgtgtctttcccgagctcttggcccgtaat 805
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| |||||||||| |||||||| || |||||| ||||
Sbjct: 806 ggtgttaagttcggtgaggctgtatggttcaagggtggatcccaaattttcagccagggt 865
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 866 ggacttgactacttgggcaacccaag 891
Score = 50.1 bits (25), Expect = 0.009
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| ||||||||| | || ||||| || || ||||| || ||||| || ||
Sbjct: 1136 atcgtcaccggaaagggtccattggaaaaccttgccgatcatcttgcagacccagttaat 1195
Query: 548 aacaatgcatgggcattcgccaccaactt 576
||||| |||||||| | |||||| |||||
Sbjct: 1196 aacaacgcatgggcctacgccacaaactt 1224
>gb| AY617096.1 | Picea sitchensis chloroplast light harvesting chlorophyll a/b
binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 763
Score = 161 bits (81), Expect = 3e-36
Identities = 201/241 (83%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 226 tgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcagatccgg 285
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || ||||||||| | |||||||| ||||||||| |||| ||||| ||||| || |
Sbjct: 286 agacgtttgccaagaacagagagctggaagtgatccacagccggtgggcaatgctgggcg 345
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || |||||||| ||||| ||| | |||||| ||||||| || |||||||| ||||| |
Sbjct: 346 ctctgggctgcgttttcccggagctcctggccagaaacggagtcaagttcggggaggcgg 405
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||||||||||||||| ||||| |||||||| || ||||
Sbjct: 406 tgtggttcaaggcgggagctcagatcttcagcgagggaggccttgactacctgggaaacc 465
Query: 482 c 482
|
Sbjct: 466 c 466
>emb| BX821638.1 |CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 911
Score = 161 bits (81), Expect = 3e-36
Identities = 213/257 (82%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 222 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 281
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| || |||||||||| |||||| |||| || || |||||| || |
Sbjct: 282 ctatccgccgacccagaaaccttcgccaggaaccgtgagcgagaagttatccacagcaga 341
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 342 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagtg 401
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 402 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgacggaggattg 461
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 462 gactacttgggcaaccc 478
Score = 87.7 bits (44), Expect = 4e-14
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 723 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 782
Query: 542 gtcaacaacaatgcatgggcattcgccaccaa 573
||||||||||| || ||||| |||||||||||
Sbjct: 783 gtcaacaacaacgcttgggccttcgccaccaa 814
>emb| X03907.1 |ATLHCP1 A.thaliana gene (LHCP AB 165) for chlorophyll a/b binding protein
Length = 999
Score = 161 bits (81), Expect = 3e-36
Identities = 186/221 (84%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 347 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 406
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 407 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 466
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 467 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 526
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
|||||||||||||||||||| || || ||||||||||||||
Sbjct: 527 gaggctgtttggttcaaggctggttcacagatcttcagcga 567
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 839 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 898
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 899 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 942
>emb| X81810.1 |PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for light-harvesting chlorophyll
a/b-binding protein
Length = 1050
Score = 161 bits (81), Expect = 3e-36
Identities = 201/241 (83%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 260 tgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcagatccgg 319
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || ||||||||| | |||||||| ||||||||| |||| ||||| ||||| || |
Sbjct: 320 agacgtttgccaagaacagagagctggaagtgatccacagccggtgggcaatgctgggcg 379
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || |||||||| ||||| ||| | |||||| ||||||| || |||||||| ||||| |
Sbjct: 380 ctctgggctgcgttttcccggagctcctggccagaaacggagtcaagttcggggaggcgg 439
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||||||||||||||| ||||| |||||||| || ||||
Sbjct: 440 tgtggttcaaggcgggagctcagatcttcagcgagggaggccttgactacctgggaaacc 499
Query: 482 c 482
|
Sbjct: 500 c 500
Score = 46.1 bits (23), Expect = 0.14
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| || || || ||||||| |||||||| || || |||||||| ||
Sbjct: 745 gccatcgtcaccggtaaaggacccatcgagaatctcgctgatcacctggccgacccggtt 804
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgt 579
| |||||| || ||||| | ||| || ||||||||
Sbjct: 805 accaacaacgcctgggcctacgctactaacttcgt 839
>emb| X81809.1 |PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for light-harvesting chlorophyll
a/b-binding protein
Length = 1062
Score = 161 bits (81), Expect = 3e-36
Identities = 201/241 (83%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 257 tgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcagatccgg 316
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || ||||||||| | |||||||| ||||||||| |||| ||||| ||||| || |
Sbjct: 317 agacgtttgccaagaacagagagctggaagtgatccacagccggtgggcaatgctgggcg 376
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || |||||||| ||||| ||| | |||||| ||||||| || |||||||| ||||| |
Sbjct: 377 ctctgggctgcgttttcccggagctcctggccagaaacggagtcaagttcggggaggcgg 436
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||||||||||||||| ||||| |||||||| || ||||
Sbjct: 437 tgtggttcaaggcgggagctcagatcttcagcgagggaggccttgactacctgggaaacc 496
Query: 482 c 482
|
Sbjct: 497 c 497
Score = 46.1 bits (23), Expect = 0.14
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| || || || ||||||| |||||||| || || |||||||| ||
Sbjct: 742 gccatcgtcaccggtaaaggacccatcgagaatctcgctgatcacctggccgacccggtt 801
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgt 579
| |||||| || ||||| | ||| || ||||||||
Sbjct: 802 accaacaacgcctgggcctacgctactaacttcgt 836
>gb| AF165529.1 |AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA,
complete cds
Length = 986
Score = 161 bits (81), Expect = 3e-36
Identities = 180/213 (84%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| ||||||||||| ||||||||||||||| |||| || |||
Sbjct: 253 tacctgaccggagagttccccggcgactacggatgggacactgctgggctgtcggcggac 312
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||||| |||||| ||||||||||||||||||| | |||||||||||
Sbjct: 313 ccagagactttcgccaggaaccgtgagctggaggtgatccactcgaggtgggccatgctc 372
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || ||||| ||||||||||| ||| | ||| | ||||| || ||||||| |||
Sbjct: 373 ggcgctctcggttgcgtcttcccggagctcctgtcgaagaacggggtccagttcggggag 432
Query: 418 gctgtttggttcaaggccggatcccagatcttc 450
|| || |||||||||||||| ||||||||||||
Sbjct: 433 gcggtgtggttcaaggccgggtcccagatcttc 465
Score = 46.1 bits (23), Expect = 0.14
Identities = 83/103 (80%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| ||| | |||||||| | ||||| | || || || ||
Sbjct: 742 gccatcgtcaccggcaagggcccagttgagaacctagtcgaccacattgctgatcctgtt 801
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||| | |||||| ||||||||||||||||
Sbjct: 802 gccaacaacgcttgggcttacgccactaacttcgttcccggca 844
>emb| X52743.1 |NTCAB21 Tabacco Cab21 mRNA for major chlorophyll a/b binding protein
Length = 953
Score = 159 bits (80), Expect = 1e-35
Identities = 218/264 (82%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||| |||| |||||| |||||||||| ||||| || || ||||| ||||| ||||||
Sbjct: 249 ggtgagtccccaagctacttgaccggtgaattccccggtgattacgggtgggatactgct 308
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || ||||| || ||||| ||||||||||| || || |||||||||||||||
Sbjct: 309 ggactttcagcagacccagaaacctttgccaagaaccgtgaactcgaggtgatccactgc 368
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||| |||||||| || || || || |||||||||||| | ||||||| || ||
Sbjct: 369 agatgggctatgcttggtgctcttggatgtgtcttccccgagctcttggcccgtaatggt 428
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
|| ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 429 gtcaagtttggcgaggctgtgtggttcaaggctggatcccaaatctttagcgagggtgga 488
Query: 463 ctggactaccttggcaacccaagc 486
|| |||||| | ||||||||||||
Sbjct: 489 cttgactacttgggcaacccaagc 512
Score = 69.9 bits (35), Expect = 9e-09
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 503 ggtccactcgagaacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgggca 562
|||||| | |||||||| ||||||||||| || ||||| || ||||||||||| ||||||
Sbjct: 771 ggtccattggagaaccttgctgaccatcttgcagacccagttaacaacaatgcttgggca 830
Query: 563 ttcgccaccaacttcgttcccgg 585
| |||||| ||||| || |||||
Sbjct: 831 tacgccacaaactttgtccccgg 853
>dbj| AB012637.1 | Nicotiana sylvestris Lhcb1*2, Lhcb1*3, Lhcb1*4 genes for light
harvesting chlorophyll a/b-binding protein, complete cds
Length = 7965
Score = 159 bits (80), Expect = 1e-35
Identities = 218/264 (82%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||| |||| |||||| |||||||||| || || || ||||| || ||||| ||||||
Sbjct: 4521 ggtgagtccccaagctacttgaccggtgaatttcccggtgactatgggtgggatactgct 4580
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || || || ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 4581 ggactttcagcagatccagaaacctttgccaagaaccgtgagctcgaggtgatccactgc 4640
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||| |||||||| || || || || |||||||||||| | ||||||| |||||
Sbjct: 4641 agatgggctatgcttggtgctcttggatgtgtcttccccgagctcttggcccgtaacggt 4700
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
|| ||||| || |||||||| |||||||||||||||||||| ||||||||||| || ||
Sbjct: 4701 gttaagtttggcgaggctgtgtggttcaaggccggatcccaaatcttcagcgatggtgga 4760
Query: 463 ctggactaccttggcaacccaagc 486
|| ||||| | ||||||||||||
Sbjct: 4761 cttgactatttgggcaacccaagc 4784
Score = 135 bits (68), Expect = 2e-28
Identities = 215/264 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||| |||| |||||| |||||||||| ||||| || || ||||| ||||| ||||||
Sbjct: 7061 ggtgaggccccaagctacttgaccggtgaattcccaggtgattacgggtgggatactgct 7120
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || || || ||||| ||||||||||| || || |||||||||||||||
Sbjct: 7121 ggactttcagcggatccagaaacctttgccaagaaccgtgaactcgaggtgatccactgc 7180
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||| |||||||| || || || || |||||||| ||| | |||| || |||||
Sbjct: 7181 agatgggctatgcttggtgctcttggatgtgtcttccctgagctcttggctcgtaacggt 7240
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
|| ||||| || || ||||| ||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 7241 gtcaagtttggcgaagctgtctggttcaaggctggatcccaaatctttagcgagggtgga 7300
Query: 463 ctggactaccttggcaacccaagc 486
|| |||||| | ||||||||||||
Sbjct: 7301 cttgactacttgggcaacccaagc 7324
Score = 129 bits (65), Expect = 1e-26
Identities = 218/269 (81%)
Strand = Plus / Plus
Query: 218 tttctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggaca 277
||||||||||| | || ||||| |||| ||||| |||||||| ||||| || ||||| |
Sbjct: 2063 tttctggtgagtctccaagctatttgactggtgaattccctggtgactatgggtgggata 2122
Query: 278 ctgctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatcc 337
||||||| | || || ||||| || || || ||||||||||| || || |||||||| |
Sbjct: 2123 ctgctggactttcagccgacccagaaacttttgccaagaaccgtgaactcgaggtgattc 2182
Query: 338 actgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaa 397
||||| | ||||| |||||||| || || || || || ||||||||| | ||||||| |
Sbjct: 2183 actgcagatgggctatgcttggtgctcttggatgtgttttccccgagctcttggcccgta 2242
Query: 398 acggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagg 457
| ||||| ||||| ||||||||||| ||||||||||| ||||| || ||||| |||||||
Sbjct: 2243 atggcgtcaagtttggtgaggctgtatggttcaaggctggatcacaaatctttagcgagg 2302
Query: 458 gcggcctggactaccttggcaacccaagc 486
| || || |||||| | ||||| ||||||
Sbjct: 2303 gtggacttgactacttgggcaatccaagc 2331
Score = 56.0 bits (28), Expect = 1e-04
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||| || || || ||||| ||| | |||||||| |||||||| || || |||||
Sbjct: 7562 caagccattgttactggaaagggcccattagagaaccttgctgaccaccttgcagaccca 7621
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| ||||||||||| ||||| | |||||| ||||| || |||||
Sbjct: 7622 gttaacaacaatgcttgggcctacgccacaaactttgtccccgg 7665
Score = 44.1 bits (22), Expect = 0.54
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 503 ggtccactcgagaacctcgctgaccatctcgccgaccccgtcaacaacaa 552
|||||| | |||||||| ||||||||||| || ||||| || ||||||||
Sbjct: 2590 ggtccattggagaaccttgctgaccatcttgctgacccagttaacaacaa 2639
>gb| DQ124219.1 | Fagus sylvatica putative chlorophyll a/b-binding protein mRNA,
partial cds
Length = 780
Score = 157 bits (79), Expect = 5e-35
Identities = 220/267 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
|||||||||||||| ||||| || ||||| |||||||| ||||| || |||||||||
Sbjct: 172 tctggtgagcccccatcttaccttactggtgaattccctggtgactatggctgggacact 231
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|||||| | || |||||||| || ||||| ||||||||||| ||||| || |||||||||
Sbjct: 232 gctgggctttcagctgacccagaaacctttgccaagaaccgtgagcttgaagtgatccac 291
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | | ||||||||||||||||| || || || |||||||| ||| | ||||||| |||
Sbjct: 292 tccagatgggccatgcttggagctcttgggtgtgtcttccctgagctcttggcccgtaac 351
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| |||||||| |||||||||||||| ||| |||| || ||||| || ||
Sbjct: 352 ggggttaagtttggtgaggccgtttggttcaaggctggagcccaaattttcagtgaaggt 411
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | || |||||||||
Sbjct: 412 gggcttgactacttgggtaacccaagc 438
Score = 40.1 bits (20), Expect = 8.4
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 ttgccggcaaggcagtgaag 90
||||||||||||||||||||
Sbjct: 29 ttgccggcaaggcagtgaag 48
>emb| X16536.1 |GMCAB5 G.max DNA for Cab5
Length = 1467
Score = 157 bits (79), Expect = 5e-35
Identities = 208/251 (82%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||| || ||||| ||||| || ||||| |||||||||||||||||| | ||||||||
Sbjct: 525 ctacctcactggtgaattcccaggtgactatggttgggacactgctgggctttctgctga 584
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| |||||||| ||||||||||| || || || || ||||||| | | ||||||||| |
Sbjct: 585 cccagagacctttgccaagaaccgtgaacttgaagtcatccactccagatgggccatgtt 644
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
||||| || ||||| || |||||||| | ||||||| ||||| || |||||||||||
Sbjct: 645 gggagccctgggctgtgttttccccgaactcttggcccgcaacggtgtcaagttcggtga 704
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|| || |||||||||||||| || ||||| ||||| ||||| || || |||||| | ||
Sbjct: 705 agccgtgtggttcaaggccgggtctcagatattcagtgagggtgggcttgactacttggg 764
Query: 477 caacccaagcc 487
|||||||||||
Sbjct: 765 caacccaagcc 775
>emb| X81808.1 |PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll
a/b-binding protein
Length = 1078
Score = 157 bits (79), Expect = 5e-35
Identities = 205/247 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| |||||||| ||||| || |||||||| |||||||| || ||| |||| || ||
Sbjct: 242 tacctaaccggtgaattcccgggtgactacgggtgggacacggcggggctgtcggcagat 301
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| |||||| | |||||||| ||||||||| |||| ||||||||| |
Sbjct: 302 ccggagacgttcgcgaagaacagagagctggaagtgatccacggccgatgggccatgttg 361
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || || |||||||| ||||| ||| | || ||| ||||||| || ||||||||||||
Sbjct: 362 ggtgctctgggctgcgtattcccagagctccttgccagaaacggagtaaagttcggtgag 421
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || ||||||||||| ||| | ||||||||||||||||| || || |||||||| |||
Sbjct: 422 gcggtgtggttcaaggcgggagctcagatcttcagcgagggagggcttgactacctgggc 481
Query: 478 aacccaa 484
| |||||
Sbjct: 482 agcccaa 488
Score = 63.9 bits (32), Expect = 6e-07
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||| || ||||| || || || ||||||||||| || || ||||| ||||| |||
Sbjct: 731 gccatcgtgacaggcaaaggacccctagagaacctcgccgatcacctcgctgaccctgtc 790
Query: 545 aacaacaatgcatgggcattcgccaccaactt 576
|||||||| || ||||| | ||||||||||||
Sbjct: 791 aacaacaacgcctgggcctacgccaccaactt 822
>gb| M14443.1 |TOMCBPA Tomato chlorophyll a/b-binding protein gene Cab-1B, complete cds
Length = 1253
Score = 157 bits (79), Expect = 5e-35
Identities = 220/267 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||||||||| || ||||| || ||||| ||||| ||
Sbjct: 374 tctggtgagtccccaagctacttgaccggtgaatttcctggtgattacgggtgggatacc 433
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || || || ||||||||||| || || || |||||||||
Sbjct: 434 gctggactttcagcagaccctgaaacttttgccaagaaccgtgaacttgaagtgatccac 493
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | ||||||| ||
Sbjct: 494 tgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctcttggcccgtaat 553
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 554 ggtgtcaagttcggtgaggctgtgtggttcaaggccggatcccagatcttcagtgaaggt 613
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | ||||||||||||
Sbjct: 614 ggacttgactacttgggcaacccaagc 640
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| || |||||||| ||||||||| | |||||||| ||||| || || || ||||||
Sbjct: 878 caagctattgtcaccggaaagggtccattggagaaccttgctgatcaccttgcagacccc 937
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| ||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 938 gtaaacaacaatgcctgggctttcgccacaaactttgtccccgg 981
>gb| AF458406.1 |AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA,
complete cds
Length = 980
Score = 155 bits (78), Expect = 2e-34
Identities = 192/230 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
|||||||| |||||||| || || |||||||| || |||||||| |||||||| || ||
Sbjct: 232 gagcccccaagctacctcacaggagagttccccggtgactacggatgggacaccgccggt 291
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || |||||||||||||||||||||| |||||| ||||| || || ||||||||| |
Sbjct: 292 ctttccgctgaccccgagaccttcgccaggaaccgtgagctagaagttatccactgcaga 351
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||||||||| || ||||| || ||||| || | |||| | ||||| |||
Sbjct: 352 tgggccatgcttggagccctaggctgtgttttccctgaacttttggctaggaacggagtg 411
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|||||||| || ||||||||||||||||| || || ||||||||||||||
Sbjct: 412 aagttcggagaagctgtttggttcaaggctggttcacagatcttcagcga 461
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| ||||| || | ||||| || ||||||||| | || || || ||||||
Sbjct: 739 atcgtcaccggaaagggaccgttggagaatcttgctgaccatttggctgatccagtcaac 798
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccgg 585
|||||||||||||| || |||||||||||||| |||||
Sbjct: 799 aacaatgcatgggcctttgccaccaacttcgtccccgg 836
>gb| U21112.1 |STU21112 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-3 gene,
nuclear gene encoding chloroplast protein, complete cds
Length = 798
Score = 155 bits (78), Expect = 2e-34
Identities = 219/266 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 184 tctggtgagtccccaagctacttgactggtgaattccctggtgactacgggtgggatacc 243
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || ||||| ||||||||||| || || ||||||||||||
Sbjct: 244 gctggactttcagcagaccctgaaacctttgccaagaaccgtgaactcgaggtgatccac 303
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | ||||||| |||
Sbjct: 304 tgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctcttggcccgtaac 363
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||||||||| |||||||| || |||||||| |||||| | |||||
Sbjct: 364 ggtgtcaagttcggtgaggctgtgtggttcaaagctggatcccaaatcttccgtgagggt 423
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | || ||||||||
Sbjct: 424 ggacttgactacttgggaaacccaag 449
>ref| NM_102732.2 | Arabidopsis thaliana CAB2; chlorophyll binding AT1G29920 (CAB2)
mRNA, complete cds
Length = 1176
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 269 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 328
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 329 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 388
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 389 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 448
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 449 gaggcagtttggttcaaggctggttcacagatcttcagcga 489
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 761 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 820
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 821 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 864
>gb| BT000726.1 | Arabidopsis thaliana clone RAFL06-67-G16 (R11472) putative
photosystem II type I chlorophyll a /b binding protein
(At1g29920) mRNA, complete cds
Length = 1044
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 255 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 314
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 315 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 374
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 375 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 434
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 435 gaggcagtttggttcaaggctggttcacagatcttcagcga 475
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 747 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 806
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 807 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 850
>gb| AY128345.1 | Arabidopsis thaliana photosystem II type I chlorophyll a/b binding
protein, putative (At1g29920) mRNA, complete cds
Length = 994
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 255 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 314
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 315 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 374
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 375 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 434
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 435 gaggcagtttggttcaaggctggttcacagatcttcagcga 475
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 747 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 806
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 807 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 850
>gb| AY081572.1 | Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920)
mRNA, complete cds
Length = 898
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 202 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 261
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 262 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 321
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 322 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 381
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 382 gaggcagtttggttcaaggctggttcacagatcttcagcga 422
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 694 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 753
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 754 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 797
>gb| AY062814.1 | Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920;
F1N18.4) mRNA, complete cds
Length = 1007
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 254 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 313
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 314 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 373
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 374 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 433
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 434 gaggcagtttggttcaaggctggttcacagatcttcagcga 474
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 746 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 805
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 806 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 849
>gb| AY060500.1 | Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds
Length = 804
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 202 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 261
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 262 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 321
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 322 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 381
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 382 gaggcagtttggttcaaggctggttcacagatcttcagcga 422
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 694 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 753
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 754 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 797
>gb| AY054198.1 | Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds
Length = 1027
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 248 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 307
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 308 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 367
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 368 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 427
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 428 gaggcagtttggttcaaggctggttcacagatcttcagcga 468
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 740 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 799
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 800 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 843
>gb| AY052237.1 | Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds
Length = 1027
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 254 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 313
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 314 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 373
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 374 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 433
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 434 gaggcagtttggttcaaggctggttcacagatcttcagcga 474
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 746 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 805
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 806 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 849
>gb| DQ355993.1 | Brassica napus chlorophyll a/b binding protein (LHB1B2) mRNA,
partial cds
Length = 226
Score = 153 bits (77), Expect = 8e-34
Identities = 176/209 (84%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| ||||| |||||||| || |||||||| |||||||| || ||
Sbjct: 7 gagcccccgagctacctcaccggagagttccccggagactacggatgggacaccgccggt 66
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || |||||||||||||||||||||| |||||| ||||| || || ||||||||| |
Sbjct: 67 ctctccgctgaccccgagaccttcgccaggaaccgtgagctagaagttatccactgcaga 126
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 127 tgggccatgctcggagccctaggctgcgttttccctgagcttttggctaggaacggagtg 186
Query: 406 aagttcggtgaggctgtttggttcaaggc 434
|||||||| || || ||||||||||||||
Sbjct: 187 aagttcggagaagcggtttggttcaaggc 215
>emb| BX815776.1 |CNS0AE4K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS93ZB12 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 972
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 240 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 299
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 300 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 359
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 360 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 419
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 420 gaggcagtttggttcaaggctggttcacagatcttcagcga 460
Score = 71.9 bits (36), Expect = 2e-09
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 732 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 791
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 792 gtcaacaacaacgcttgggcctt-gccaccaactttgttcccgg 834
>gb| AC008030.4 |AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete
sequence
Length = 101075
Score = 153 bits (77), Expect = 8e-34
Identities = 185/221 (83%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 19294 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 19353
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 19354 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 19413
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| ||| | ||||| | ||||| || ||||| ||
Sbjct: 19414 ctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagtttgga 19473
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || ||||||||||||||
Sbjct: 19474 gaggcagtttggttcaaggctggttcacagatcttcagcga 19514
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Minus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 16716 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 16657
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 16656 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 16597
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 16596 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 16537
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 16536 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 16493
Score = 135 bits (68), Expect = 2e-28
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| | ||
Sbjct: 21937 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 21996
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
||||| |||||||| ||||| | |||||| ||||| || || |||||| || | |||||
Sbjct: 21997 gctgatcccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggct 22056
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| | ||||| || ||||||
Sbjct: 22057 atgctcggagccctaggctgcgtcttccctgagcttttggctaggaacggagtcaagttc 22116
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 22117 ggagaggcggtttggttcaaggccggttcacagatctttagcga 22160
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 16221 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 16162
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 16161 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 16118
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||| ||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 22432 caagccattgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 22491
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 22492 gtcaacaacaacgcatgggccttcgcaaccaactttgttcccgg 22535
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 19786 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 19845
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 19846 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 19889
>ref| NM_102733.2 | Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1);
chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds
Length = 1044
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 325 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 384
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 385 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 444
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 445 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 488
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 760 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 819
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 820 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 863
>gb| AY389597.1 | Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein
mRNA, partial cds
Length = 575
Score = 151 bits (76), Expect = 3e-33
Identities = 112/124 (90%)
Strand = Plus / Plus
Query: 364 ctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtt 423
||||||||||||||||||||| | || ||||| ||||||||||||||||| ||||| ||
Sbjct: 2 ctcggctgcgtcttccccgagctcctcgcccgcaacggcgtgaagttcggcgaggcggtc 61
Query: 424 tggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaaccca 483
||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 62 tggttcaaggccggagcccagatcttcagcgagggcggattggactacctgggcaacccc 121
Query: 484 agcc 487
||||
Sbjct: 122 agcc 125
Score = 87.7 bits (44), Expect = 4e-14
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||| ||||||||||| ||| | |||||| | || || || ||||||||||||||||||
Sbjct: 368 atcgtgaccggcaaggggccattggagaacttggccgatcacctcgccgaccccgtcaac 427
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| ||||| || ||||||||||| || |||||||
Sbjct: 428 aacaatgcctgggcttttgccaccaactttgtccccggca 467
>gb| AY091169.1 | Arabidopsis thaliana putative chlorophyll a/b-binding protein
(At1g29930) mRNA, complete cds
Length = 835
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 199 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 258
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 259 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 318
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 319 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 378
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 379 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 422
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 694 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 753
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 754 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 797
>gb| AY050935.1 | Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
binding protein (At1g29930) mRNA, complete cds
Length = 1014
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 325 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 384
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 385 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 444
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 445 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 488
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 760 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 819
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 820 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 863
>gb| AY058180.1 | Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds
Length = 1019
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 325 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 384
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 385 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 444
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 445 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 488
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 760 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 819
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 820 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 863
>gb| AF428359.1 |AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds
Length = 1045
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 325 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 384
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 385 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 444
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 445 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 488
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 760 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 819
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 820 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 863
>gb| AY045673.1 | Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds
Length = 999
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 325 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 384
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 385 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 444
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 445 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 488
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 760 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 819
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 820 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 863
>emb| BX815726.1 |CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS89ZA03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 930
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 234 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 293
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 294 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 353
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 354 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 413
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 414 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 457
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 729 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 788
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 789 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 832
>gb| AC022455.5 |AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence,
complete sequence
Length = 82053
Score = 151 bits (76), Expect = 3e-33
Identities = 187/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 145 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 204
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 205 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 264
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 265 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 324
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 325 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 368
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 640 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 699
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 700 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 743
>emb| X16535.1 |GMCAB4 G.max DNA for Cab4
Length = 1470
Score = 151 bits (76), Expect = 3e-33
Identities = 220/268 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
|||||||||||||| |||||| || ||||| ||||| || ||||| ||||||||||||
Sbjct: 511 tctggtgagcccccatcctacctcactggtgaattcccaggtgactatggttgggacact 570
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|||||| | ||||||||||| |||||||| ||||| ||||| || ||||| || ||||||
Sbjct: 571 gctgggctttctgctgacccagagacctttgccaaaaaccgtgaactggaagtcatccac 630
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | | ||||||||| | ||||| | ||||| || ||||| || | || |||| |||
Sbjct: 631 tccagatgggccatgttgggagccttgggctgtgttttccctgaactcttgtcccgcaac 690
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| |||||||| || |||||||||||||| || ||||| ||||| ||||||
Sbjct: 691 ggagtcaagtttggtgaggccgtgtggttcaaggccgggtctcagatattcagtgagggc 750
Query: 460 ggcctggactaccttggcaacccaagcc 487
|| || |||||| | |||||||||||||
Sbjct: 751 gggcttgactacttgggcaacccaagcc 778
>dbj| AB236867.1 | Panax ginseng cab mRNA for chlorophyll a/b binding protein,
complete cds
Length = 935
Score = 149 bits (75), Expect = 1e-32
Identities = 204/247 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||||||||| |||||||| ||||| || |||||||||||||| | || ||||||
Sbjct: 224 tacctgaccggtgaattccctggagactatgggtgggacactgctggactttcagctgac 283
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| || ||||||||||| ||||| || ||||||||| || | ||||||||||||
Sbjct: 284 ccagagacatttgccaagaaccgtgagctcgaagtgatccacagcagatgggccatgctt 343
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || || ||||| |||||||| || | || || | || || || || ||||| |||
Sbjct: 344 ggtgcactaggctgtgtcttccctgaaattcttgcaaggaatggtgtcaaattcggcgag 403
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| |||||||||||||||||| |||| |||||| ||| || ||||| ||||| ||||||
Sbjct: 404 gcagtttggttcaaggccggagcccaaatcttctccgaaggtggccttgactatcttggc 463
Query: 478 aacccaa 484
|||||||
Sbjct: 464 aacccaa 470
>dbj| AB006081.1 | Fagus crenata mRNA for chlorophyll a/b-binding protein, complete
cds
Length = 1010
Score = 149 bits (75), Expect = 1e-32
Identities = 219/267 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
|||||||||||||| ||||| || ||||| |||||||| ||||| || |||||||||
Sbjct: 228 tctggtgagcccccatcttaccttactggtgaattccctggtgactatggctgggacact 287
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|||||| | || |||||||| || ||||| || |||||||| ||||| || |||||||||
Sbjct: 288 gctgggctatcagctgacccagaaacctttgctaagaaccgtgagcttgaagtgatccac 347
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | | ||||||||||||||||| || || || |||||||| ||| | ||||||| |||
Sbjct: 348 tccagatgggccatgcttggagctcttgggtgtgtcttccctgagctcttggcccgtaac 407
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| |||||||| |||||||||||||| ||| |||| || ||||| || ||
Sbjct: 408 ggggttaagtttggtgaggccgtttggttcaaggctggagcccaaattttcagtgaaggt 467
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | || |||||||||
Sbjct: 468 gggcttgactacttgggtaacccaagc 494
Score = 42.1 bits (21), Expect = 2.1
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 46 accatgtcgctctcttcccaagcctttgccggcaaggcagtgaag 90
|||||| | |||||||||| | | ||||||||||||||||||||
Sbjct: 60 accatggctctctcttccccatctcttgccggcaaggcagtgaag 104
>gb| AF479777.1 | Chlamydomonas reinhardtii major light-harvesting complex II protein
m10 (Lhcbm10) mRNA, complete cds
Length = 1077
Score = 147 bits (74), Expect = 5e-32
Identities = 215/262 (82%)
Strand = Plus / Plus
Query: 221 ctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactg 280
|||| |||||||||||||||||||| || |||||||| || |||||||| |||||||| |
Sbjct: 179 ctggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 238
Query: 281 ctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccact 340
| || |||| |||||||| ||||||||| |||||||||||||| ||||||||
Sbjct: 239 ccggtctgtccgctgacccggagaccttcaagcgctaccgcgagctggagctgatccacg 298
Query: 341 gccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacg 400
||| ||||||||||| || || || |||||| || ||||||| |||||||| | ||
Sbjct: 299 cccgctgggccatgctgggcgctctgggctgcatcacccccgagctgctggccaagagcg 358
Query: 401 gcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcg 460
|| ||||||| |||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 359 gcacccagttcggcgaggctgtctggttcaaggccggcgcccagatcttctctgagggcg 418
Query: 461 gcctggactaccttggcaaccc 482
||||||||||||| ||||||||
Sbjct: 419 gcctggactacctgggcaaccc 440
>emb| X52742.1 |NTCAB50 Tabacco Cab50 mRNA for major chlorophyll a/b binding protein
Length = 964
Score = 147 bits (74), Expect = 5e-32
Identities = 218/266 (81%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| | || || ||| |||| ||||| |||||||| ||||| || |||||||||
Sbjct: 257 tctggtgagtctccaagttacttgacgggtgaattccctggtgactatggatgggacact 316
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || || |||||||| || ||| ||||||||||||||
Sbjct: 317 gctggactttcagctgatccagaaacttttgccaagaatcgtgagttggaggtgatccac 376
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| ||||||||||| || || || |||||||||||| | ||||||| |||
Sbjct: 377 tgcagatgggctatgcttggagctcttggttgtgtcttccccgagctcttggcccgtaac 436
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| ||||| || || ||||||||||| |||||||| || || ||||||||
Sbjct: 437 ggggtcaagtttggtgaagcagtatggttcaaggctggatcccaaatttttagcgagggt 496
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 497 ggacttgactacttgggcaacccaag 522
Score = 63.9 bits (32), Expect = 6e-07
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| |||||||| || ||||||||| | |||||||| || ||||| || || |||||
Sbjct: 761 caagctatcgtcactggaaagggtccattggagaacctagccgaccaccttgctgaccca 820
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| ||||||||||| ||| | | |||||||||||| || |||||
Sbjct: 821 gttaacaacaatgcctggtcctacgccaccaactttgtccccgg 864
>emb| X16436.1 |SACAB Mustard cab gene for chlorophyll a/b-binding protein
Length = 2774
Score = 145 bits (73), Expect = 2e-31
Identities = 214/261 (81%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
|||||||| |||||||| || || |||||||| || ||||| || |||||||| |||||
Sbjct: 1765 gagcccccaagctaccttactggagagttccccggagactatggatgggacaccgctggt 1824
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || |||||||||||||| ||||| | ||||| ||||| || || ||||||||| |
Sbjct: 1825 ctatcagctgaccccgagactttcgctagaaaccgtgagctagaagttatccactgcaga 1884
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || || ||||| ||||| ||| | |||| || ||||| ||
Sbjct: 1885 tgggccatgctcggagccctaggttgcgttttccctgagctattggctcgtaacggagtc 1944
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 1945 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgaaggaggactt 2004
Query: 466 gactaccttggcaacccaagc 486
|||||| | ||||||||||||
Sbjct: 2005 gactacttgggcaacccaagc 2025
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| ||||| || | ||||| ||||| |||||| | || || || ||||||
Sbjct: 2272 atcgtcaccggaaagggaccgttggagaatctcgccgaccatttggctgatccagtcaac 2331
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||| |||||||| ||||||||||||||||| |||||
Sbjct: 2332 aacaacgcatgggccttcgccaccaacttcgtccccgg 2369
>emb| X15894.1 |SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide
Length = 2775
Score = 145 bits (73), Expect = 2e-31
Identities = 214/261 (81%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
|||||||| |||||||| || || |||||||| || ||||| || |||||||| |||||
Sbjct: 1766 gagcccccaagctaccttactggagagttccccggagactatggatgggacaccgctggt 1825
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || |||||||||||||| ||||| | ||||| ||||| || || ||||||||| |
Sbjct: 1826 ctatcagctgaccccgagactttcgctagaaaccgtgagctagaagttatccactgcaga 1885
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || || ||||| ||||| ||| | |||| || ||||| ||
Sbjct: 1886 tgggccatgctcggagccctaggttgcgttttccctgagctattggctcgtaacggagtc 1945
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| || |||||||||||||| || || ||
Sbjct: 1946 aagttcggagaagcggtttggttcaaggccggttcacagatcttcagcgaaggaggactt 2005
Query: 466 gactaccttggcaacccaagc 486
|||||| | ||||||||||||
Sbjct: 2006 gactacttgggcaacccaagc 2026
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| ||||| || | ||||| ||||| |||||| | || || || ||||||
Sbjct: 2273 atcgtcaccggaaagggaccgttggagaatctcgccgaccatttggctgatccagtcaac 2332
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||| |||||||| ||||||||||||||||| |||||
Sbjct: 2333 aacaacgcatgggccttcgccaccaacttcgtccccgg 2370
>gb| BT015572.1 | Arabidopsis thaliana At1g29910 mRNA sequence
Length = 762
Score = 143 bits (72), Expect = 8e-31
Identities = 186/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| | ||
Sbjct: 157 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 216
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
||||| |||||||| ||||| | |||||| ||||| || || |||||| || | ||||||
Sbjct: 217 gctgatcccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggcc 276
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | ||||| | ||||| || |||||
Sbjct: 277 atgctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtcaagttt 336
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| |||||||||||||| || || ||||||||||||||
Sbjct: 337 ggagaggcagtttggttcaaggctggttcacagatcttcagcga 380
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 652 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 711
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 712 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 755
>emb| BX817619.1 |CNS0AAVV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL33ZA06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 994
Score = 143 bits (72), Expect = 8e-31
Identities = 186/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 249 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 308
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | ||||||
Sbjct: 309 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggcc 368
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| |||||| || ||||||
Sbjct: 369 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacgtagtcaagttc 428
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 429 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 472
Score = 40.1 bits (20), Expect = 8.4
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccat 529
|||||||||||||| || ||||| || | |||||||| |||||||||
Sbjct: 744 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccat 791
>emb| X03909.1 |ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein
Length = 1109
Score = 143 bits (72), Expect = 8e-31
Identities = 186/224 (83%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| || || | ||
Sbjct: 416 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 475
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
|||||||||||||| ||||| | |||||| || || || || |||||| || | |||||
Sbjct: 476 gctgaccccgagacattcgcaaggaaccgtgaactagaagttatccacagcaggtgggct 535
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| ||||||| || ||||||
Sbjct: 536 atgctcggagccctaggctgcgtcttccctgagcttttggctagaaacggagtcaagttc 595
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 596 ggagaggcggtttggttcaaggccggttcacagatcttcagcga 639
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 911 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 970
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 971 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 1014
>emb| X14505.1 |PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein
Length = 1083
Score = 143 bits (72), Expect = 8e-31
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||||||||| ||||| || |||||||| |||||||| || ||| |||| || ||
Sbjct: 296 tacctgaccggtgaattccccggtgactacgggtgggacacggcggggctgtcggcggat 355
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| |||||| | |||||||| |||||||||| ||| ||||| |||||
Sbjct: 356 ccggagacgttcgcgaagaacagagagctggaagtgatccactcccggtgggcgatgctg 415
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || ||||| ||||| ||||| ||| | || || | ||||| || ||||||||||||
Sbjct: 416 ggcgctctcgggtgcgtattcccggagcttcttgcgaggaacggagtaaagttcggtgag 475
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacct 473
|| || ||||||||||| ||| | ||||||||||||||||| || || ||||||||
Sbjct: 476 gcggtgtggttcaaggcgggagctcagatcttcagcgagggagggcttgactacct 531
Score = 71.9 bits (36), Expect = 2e-09
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 510 tcgagaacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgggcattcgcca 569
||||||||||||| || || || ||||||||||| ||||||||||| ||||| | |||||
Sbjct: 810 tcgagaacctcgccgatcacctggccgaccccgtgaacaacaatgcctgggcctacgcca 869
Query: 570 ccaacttcgttcccgg 585
|||| ||||| |||||
Sbjct: 870 ccaatttcgtccccgg 885
>gb| AF079590.1 |AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding
protein (CABII) mRNA, partial cds
Length = 714
Score = 143 bits (72), Expect = 8e-31
Identities = 186/224 (83%)
Strand = Plus / Plus
Query: 259 ggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaac 318
||||||||||| |||||||| || ||| |||| || ||||| ||||| ||||| ||||
Sbjct: 3 ggcgactacgggtgggacacggcggggctgtcggcggacccggagacgttcgcgcggaac 62
Query: 319 cgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttc 378
|||||||||||||||||||||| || ||||| ||||| || ||||| || ||||| |||
Sbjct: 63 cgcgagctggaggtgatccactcgcggtgggcgatgctgggcgcgctggggtgcgtgttc 122
Query: 379 cccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccgga 438
|| ||| | |||||| |||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 123 ccggagatcctggccaagaacggcgtcaagttcggcgaggcggtgtggttcaaggccggc 182
Query: 439 tcccagatcttcagcgagggcggcctggactaccttggcaaccc 482
| ||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 183 gcgcagatcttctcggagggcgggctggactacctgggcaaccc 226
Score = 85.7 bits (43), Expect = 2e-13
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| |||||| |||| |||||||||
Sbjct: 471 gccatcgtcaccggcaagggacccatcgagaacctcttcgaccatgtcgctgaccccgtc 530
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 531 gccaacaacgcctgggcttacgccaccaacttcgtccccggca 573
>emb| X14341.1 |SOCABP S.oleracea chloroplast mRNA for chlorophyll a/b binding protein
Length = 980
Score = 143 bits (72), Expect = 8e-31
Identities = 204/248 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| ||||||||||||||||| |||||||||||||||||||||||| | || ||||||
Sbjct: 257 tacctcaccggtgagttccctggtgactacggttgggacactgctgggctttcagctgac 316
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| || |||||||| |||||||| ||||| || || ||||||||| | ||||| ||| |
Sbjct: 317 ccagaaaccttcgctaagaaccgtgagcttgaagttatccactgcaggtgggctatgttg 376
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| | || || || ||||| ||| | ||||||| || || || ||||||||||||
Sbjct: 377 ggagcattgggttgtgttttcccagagctcttggcccgtaatggtgttaagttcggtgag 436
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| |||||||| ||||| || || || ||||| |||||||| || || |||||| | ||
Sbjct: 437 gccgtttggtttaaggcgggttcacaaatctttagcgagggtgggcttgactacttgggt 496
Query: 478 aacccaag 485
||||||||
Sbjct: 497 aacccaag 504
Score = 48.1 bits (24), Expect = 0.035
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 494 accggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaacaacaat 553
||||| ||||| ||| | || |||||||||||||| || || ||||| || |||||||||
Sbjct: 755 accggaaagggcccattggaaaacctcgctgaccaccttgctgacccggttaacaacaat 814
Query: 554 gcatgggcattcgccaccaacttcgttcccgg 585
|| ||| || ||||||||||| || |||||
Sbjct: 815 gcttggaactttgccaccaactttgtccccgg 846
>gb| M21396.1 |SOYCBPA Soybean light-harvesting chlorophyll a/b-binding protein (LHCPII)
mRNA, 3' end
Length = 911
Score = 143 bits (72), Expect = 8e-31
Identities = 219/268 (81%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
|||||||||||||| |||||| || ||||| ||||| || ||||| ||||||||||||
Sbjct: 126 tctggtgagcccccatcctacctcactggtgaattcccaggtgactatggttgggacact 185
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|||||| | ||||||||||| |||||||| ||||||||||| || || || || ||||||
Sbjct: 186 gctgggctttctgctgacccagagacctttgccaagaaccgtgaacttgaagtcatccac 245
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | | ||||||||| | ||||| || ||||| || |||||||| | ||||||| |||
Sbjct: 246 tccagatgggccatgttgggagccctgggctgtgttttccccgaactcttggcccgcaac 305
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||| || |||||||||||||| || ||||| ||||| |||||
Sbjct: 306 ggtgtcaagttcggtgaagcgtcgtggttcaaggccgggtctcagatattcagtgagggt 365
Query: 460 ggcctggactaccttggcaacccaagcc 487
|| || |||||| | ||||||| |||||
Sbjct: 366 gggcttgactacttgggcaaccaaagcc 393
>dbj| AB206466.1 | Adiantum capillus-veneris AcCab1 gene for chlorophyll a/b-binding
protein, complete cds
Length = 1500
Score = 141 bits (71), Expect = 3e-30
Identities = 206/251 (82%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||| || |||||||||||||| ||||| || |||||||| ||||| |||| || ||
Sbjct: 722 ctacctcactggtgagttccctggtgactatgggtgggacacagctggtctgtccgcaga 781
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| |||||||||||||||||| | ||||||||||||||||| | | | ||||||||| |
Sbjct: 782 cccagagaccttcgccaagaacagggagctggaggtgatccattccagatgggccatgtt 841
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
||||| | ||||| || |||||| ||||||| ||||| || ||||| |||||
Sbjct: 842 gggagccttgggctgtgtgacgcccgagctgctggcaaagaacggtgtcaagtttggtga 901
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| ||||||||||| || |||||||||||| ||| |||||||| || || |||||
Sbjct: 902 ggctgtgtggttcaaggctggctcccagatcttcgccgatggcggccttgattatcttgg 961
Query: 477 caacccaagcc 487
|||||| ||||
Sbjct: 962 caacccgagcc 972
>gb| M14444.1 |TOMCBPB Tomato chlorophyll a/b-binding protein gene Cab-3C, complete cds
Length = 1135
Score = 141 bits (71), Expect = 3e-30
Identities = 218/267 (81%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||| ||| |||| |||||| ||||||||||||| ||||| || ||||| |||||||||
Sbjct: 392 tctggggagtccccaagctacttgaccggtgagtttcctggtgattacggatgggacact 451
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || |||||||| || || ||||| |||||||| ||| ||||||| || ||
Sbjct: 452 gctggactttcagctgaccctgaaacattcgctaagaaccgtgagttggaggttattcat 511
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
|| | |||||||||||||| || || || || || ||||||||| | ||||||| ||
Sbjct: 512 tgtagatgggccatgcttggtgctcttggatgtgtattccccgagcttttggcccgtaat 571
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||||||||| ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 572 ggtgttaagttcggtgaagctgtatggttcaaggctggatcacaaattttcagcgagggt 631
Query: 460 ggcctggactaccttggcaacccaagc 486
|| || |||||| | || |||||||||
Sbjct: 632 ggacttgactacttgggaaacccaagc 658
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| ||||||||||| ||||||||| | |||||||| |||||||||||||| |||||
Sbjct: 896 caagctatcgtcaccggaaagggtccattggagaaccttgctgaccatctcgctgaccca 955
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||| |||||||| ||||| |||||||| ||||| || |||||
Sbjct: 956 gtcaataacaatgcttgggccttcgccacaaactttgtccccgg 999
>dbj| AB026686.1 | Physcomitrella patens mRNA for chlorophyll a/b-binding protein
precursor, complete cds
Length = 964
Score = 141 bits (71), Expect = 3e-30
Identities = 206/251 (82%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||| | |||||||||| |||| || ||||| |||||||||||||| | || | ||
Sbjct: 249 ctacctcaacggtgagttcgctggtgattacggctgggacactgctggactctcatccga 308
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|||||||||||||||| ||||||||||| |||||||||||| || |||||||||||
Sbjct: 309 ccccgagaccttcgcccgcaaccgcgagctcgaggtgatccacgctcgatgggccatgct 368
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|||||| || || || | ||| |||||| ||||| | ||| || |||||||||||
Sbjct: 369 tggagctctgggatgtctgaccccagagttgttggccaagagcggtgttaagttcggtga 428
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| |||||||||||||||||| | ||||||||||||||||| || |||||||| | ||
Sbjct: 429 ggccgtttggttcaaggccggagctcagatcttcagcgagggaggtttggactacttggg 488
Query: 477 caacccaagcc 487
|||||| ||||
Sbjct: 489 caaccccagcc 499
Score = 50.1 bits (25), Expect = 0.009
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 533 gccgaccccgtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| |||||| || ||||| | |||||||||||||||||||||
Sbjct: 787 gccgaccccgttgccaacaacgcctgggcctacgccaccaacttcgttcccgg 839
>gb| DQ226787.1 | Boechera divaricarpa isolate SLW-B-B06 mRNA sequence
Length = 827
Score = 139 bits (70), Expect = 1e-29
Identities = 190/230 (82%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||| ||||||||||| || || |||||||| || |||||||| |||||||| |||||
Sbjct: 21 gagccaccgagctacctcacaggagagttccccggagactacggatgggacacagctggc 80
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || |||||||||||||| || || | |||||| ||||| || || |||||| || |
Sbjct: 81 ctatccgctgaccccgagacatttgcaaggaaccgtgagctagaagttatccacagcagg 140
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||||||||| ||| | ||||| | ||||| ||
Sbjct: 141 tgggccatgctcggagccctaggctgcgtcttccctgagcttttggccaggaacggagtc 200
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|||||||| ||||| |||||||||||||| || || || |||||||||||
Sbjct: 201 aagttcggagaggcggtttggttcaaggcaggttcacaaatcttcagcga 250
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | ||||| || ||||||||| | ||||| ||
Sbjct: 522 caagccatcgtcactggtaagggaccgttggagaatcttgctgaccatttggccgatcca 581
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 582 gttaacaacaacgcatgggccttcgccaccaactttgttcccgg 625
>gb| AY430082.1 | Trifolium pratense chlorophyll a/b binding protein mRNA, complete
cds; nuclear gene for chloroplast product
Length = 987
Score = 139 bits (70), Expect = 1e-29
Identities = 217/266 (81%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||||||||| ||| |||| || |||||||| || ||||||||||||||||||
Sbjct: 239 tctggtgagcccccgtcttacttgactggagagttcccaggtgactacggttgggacact 298
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | ||||||||||| ||||| |||||||||||||| ||||| || || ||||||
Sbjct: 299 gctggactttctgctgacccagagacattcgccaagaaccgtgagcttgaagttatccac 358
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
| | ||||| ||| | ||||| | || || || ||||| ||| | || | || |||
Sbjct: 359 tctagatgggctatgttaggagccttgggatgtgttttcccagagcttttgtctcgcaac 418
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || || ||||| |||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 419 ggtgttaaattcggcgaggctgtttggttcaaggccggatctcaaatctttagcgagggt 478
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 479 ggacttgactacttgggcaacccaag 504
Score = 79.8 bits (40), Expect = 1e-11
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 494 accggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaacaacaat 553
||||| |||||||| | |||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 755 accggaaagggtcctttggagaaccttgctgaccatcttgctgacccagtcaacaacaac 814
Query: 554 gcatgggcattcgccaccaacttcgttcccgg 585
|| ||||| || ||||||||||| ||||||||
Sbjct: 815 gcctgggcttttgccaccaactttgttcccgg 846
>gb| DQ122900.1 | Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b
binding protein (LhcII-1.3) mRNA, complete cds; nuclear
gene for chloroplast product
Length = 1100
Score = 139 bits (70), Expect = 1e-29
Identities = 202/246 (82%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||||||||| |||||||| || |||||||| |||||||| || || |||| |||||
Sbjct: 189 ctacctgaccggcgagttccccggtgactacggctgggacaccgccggcctgtcggctga 248
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||||||| |||||||||||||| |||||||| ||| |||||||||||
Sbjct: 249 cccggagaccttcaagcgctaccgcgagctggagctgatccacgcccgctgggccatgct 308
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || |||||| | ||||||| |||||||| |||||| ||||||| ||
Sbjct: 309 gggcgccctgggctgcctgacccccgagctgctggccaagaacggcacccagttcggcga 368
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||
Sbjct: 369 ggctgtctggttcaaggccggcgcccagatcttctccgagggcggcctggactacctggg 428
Query: 477 caaccc 482
||||||
Sbjct: 429 caaccc 434
>gb| U21115.1 |STU21115 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-6) gene,
nuclear gene encoding chloroplast protein, partial cds
Length = 405
Score = 139 bits (70), Expect = 1e-29
Identities = 184/222 (82%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||||||||| |||||||| |||||||| ||||| |||
Sbjct: 184 tctggtgagtccccaagctacttgaccggtgaattccctggtgactacggctgggatact 243
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| || ||||| ||||||||||| || || |||||||||||
Sbjct: 244 gctggactttcagcagaccctgaaacctttgccaagaaccgtgaactcgaggtgatccat 303
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
||| | ||||| |||||||| || || || || |||||||| ||| | ||||||| |||
Sbjct: 304 tgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctcttggcccgtaac 363
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcc 441
|| || ||||| ||||||||||| |||||||| || ||||||
Sbjct: 364 ggtgtcaagtttggtgaggctgtgtggttcaaagctggatcc 405
>emb| X68333.1 |HHLHC H.helix mRNA for light harvesting chlorophyll a/b binding protein
Length = 686
Score = 139 bits (70), Expect = 1e-29
Identities = 166/198 (83%)
Strand = Plus / Plus
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|||||||| |||||||| |||||||||||||| ||||| |||||||||||| | | |||
Sbjct: 37 tctgctgatcccgagactttcgccaagaaccgtgagctcgaggtgatccacagtagatgg 96
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|| ||||||||||| || ||||| ||||| |||||| | ||||||| ||||| || ||
Sbjct: 97 gctatgcttggagcccttggctgtgtctttcccgagctcttggcccgtaacggtgtcaaa 156
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
|||||||||||||| ||||||||||| ||| | || || ||||| ||||| || || |||
Sbjct: 157 ttcggtgaggctgtgtggttcaaggctggagctcaaattttcagtgagggtgggcttgac 216
Query: 469 taccttggcaacccaagc 486
||| | ||||||||||||
Sbjct: 217 tacttgggcaacccaagc 234
Score = 60.0 bits (30), Expect = 9e-06
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 500 aagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgg 559
||||||||| | |||||||| || |||||||| || || || || |||||||||||||||
Sbjct: 490 aagggtccattggagaacctagccgaccatcttgctgatccagtaaacaacaatgcatgg 549
Query: 560 gcattcgccaccaacttcgttcccgg 585
|| | ||||||||||| || |||||
Sbjct: 550 gcctatgccaccaactttgtccccgg 575
>gb| L36064.1 |PRULHP Prunus persica (clone pAB19) light harvesting chlorophyll a/b
binding protein (Lhcb-Pp1) gene, complete cds
Length = 1912
Score = 139 bits (70), Expect = 1e-29
Identities = 193/234 (82%)
Strand = Plus / Plus
Query: 253 ttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttcgcc 312
|||||||| || ||||||||||||||||||||| | || |||||||| |||||||| |||
Sbjct: 558 ttccctggtgattacggttgggacactgctgggctctcagctgacccagagacctttgcc 617
Query: 313 aagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgc 372
|||||||| ||||| || || ||||| | | |||||||||||||| || || ||||||
Sbjct: 618 aagaaccgtgagcttgaagttatccattcaagatgggccatgcttggtgctctgggctgc 677
Query: 373 gtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaag 432
|| ||||| || | || |||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 678 gttttccctgaactcttgtcccgtaacggggtcaagttcggtgaggctgtatggttcaag 737
Query: 433 gccggatcccagatcttcagcgagggcggcctggactaccttggcaacccaagc 486
|| || ||||||| ||||| ||||| || || |||||| | || |||||||||
Sbjct: 738 gctggcgcccagatattcagtgagggtgggctagactacttgggaaacccaagc 791
>gb| AC135564.4 | Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
sequence
Length = 139771
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Minus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| || |||||||| |||||||| || ||| | || || |||
Sbjct: 79568 tacctgaccggagagttcccgggagactacgggtgggacacggcggggctatcggccgac 79509
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | |||| | ||||||||||||||||||| || ||||| |||||
Sbjct: 79508 ccggagacgttcgcgaggaacagggagctggaggtgatccactcgcggtgggcgatgctg 79449
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||||||||||| ||| | ||| || ||||| ||||||||||| |||
Sbjct: 79448 ggggcgctgggctgcgtcttcccggagatcctgtccaagaacggggtgaagttcggggag 79389
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||| || || |||||||| ||
Sbjct: 79388 gcggtgtggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctgggg 79329
Query: 478 aaccc 482
|||||
Sbjct: 79328 aaccc 79324
Score = 93.7 bits (47), Expect = 7e-16
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 79079 gccatcgtcaccggcaagggccccatcgagaacctcttcgaccacgtcgccgaccccgtc 79020
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||||| ||||||||||||||| |||||||
Sbjct: 79019 gccaacaacgcctgggcatacgccaccaacttcgtccccggca 78977
>gb| DQ226825.1 | Boechera divaricarpa isolate SLW-B-H09 mRNA sequence
Length = 775
Score = 137 bits (69), Expect = 5e-29
Identities = 209/257 (81%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||| ||||||||||| ||||| |||||||| || ||||| || |||||||| || ||
Sbjct: 21 gagccaccgagctaccttaccggagagttccccggtgactatggatgggacaccgccggt 80
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || ||||| || ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 81 ctatccgctgatccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 140
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| |||
Sbjct: 141 tgggccatgctcggagccctaggctgcgttttccctgagctcttggctaggaacggagtg 200
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
||||| || || || |||||||||||| |||| || |||||||||||||| || || ||
Sbjct: 201 aagttyggagaagcggtttggttcaagrccggttcacagatcttcagcgacggaggattg 260
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 261 gactacttgggcaaccc 277
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| ||| | ||||||||||| |||||| | || || ||
Sbjct: 522 caagccatcgtcaccggaaagggaccattggagaacctcgccgaccatttggctgatcca 581
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 582 gtcaacaacaacgcatgggccttcgccaccaacttcgtccccgg 625
>gb| DP000009.1 | Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| || |||||||| |||||||| || ||| | || || |||
Sbjct: 21808248 tacctgaccggagagttcccgggagactacgggtgggacacggcggggctatcggccgac 21808307
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | |||| | ||||||||||||||||||| || ||||| |||||
Sbjct: 21808308 ccggagacgttcgcgaggaacagggagctggaggtgatccactcgcggtgggcgatgctg 21808367
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||||||||||| ||| | ||| || ||||| ||||||||||| |||
Sbjct: 21808368 ggggcgctgggctgcgtcttcccggagatcctgtccaagaacggggtgaagttcggggag 21808427
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||| || || |||||||| ||
Sbjct: 21808428 gcggtgtggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctgggg 21808487
Query: 478 aaccc 482
|||||
Sbjct: 21808488 aaccc 21808492
Score = 93.7 bits (47), Expect = 7e-16
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 21808737 gccatcgtcaccggcaagggccccatcgagaacctcttcgaccacgtcgccgaccccgtc 21808796
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||||| ||||||||||||||| |||||||
Sbjct: 21808797 gccaacaacgcctgggcatacgccaccaacttcgtccccggca 21808839
>dbj| AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| || |||||||| |||||||| || ||| | || || |||
Sbjct: 21801277 tacctgaccggagagttcccgggagactacgggtgggacacggcggggctatcggccgac 21801336
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | |||| | ||||||||||||||||||| || ||||| |||||
Sbjct: 21801337 ccggagacgttcgcgaggaacagggagctggaggtgatccactcgcggtgggcgatgctg 21801396
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||||||||||| ||| | ||| || ||||| ||||||||||| |||
Sbjct: 21801397 ggggcgctgggctgcgtcttcccggagatcctgtccaagaacggggtgaagttcggggag 21801456
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||| || || |||||||| ||
Sbjct: 21801457 gcggtgtggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctgggg 21801516
Query: 478 aaccc 482
|||||
Sbjct: 21801517 aaccc 21801521
Score = 93.7 bits (47), Expect = 7e-16
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 21801766 gccatcgtcaccggcaagggccccatcgagaacctcttcgaccacgtcgccgaccccgtc 21801825
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||||| ||||||||||||||| |||||||
Sbjct: 21801826 gccaacaacgcctgggcatacgccaccaacttcgtccccggca 21801868
>emb| BX821505.1 |CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 959
Score = 137 bits (69), Expect = 5e-29
Identities = 210/257 (81%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 229 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgctggt 288
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| || |||||||||| |||||| ||||| || || |||||| || |
Sbjct: 289 ctatccgccgacccagaaaccttcgccaggaaccgtgagctagaagttatccacagcaga 348
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| ||||| || |||||||| ||||| ||| | |||| | ||||| ||
Sbjct: 349 tgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacggagta 408
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| || || ||||||||||||||||| | |||| || |||||| || || ||
Sbjct: 409 aagttcggagaagcggtttggttcaaggccggtacacagaactacagcgacggaggattg 468
Query: 466 gactaccttggcaaccc 482
|||||| | ||||||||
Sbjct: 469 gactacttgggcaaccc 485
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 730 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 789
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||| ||||||| || ||||| | ||||||||||||||| |||||
Sbjct: 790 gtctacaacaacgcttgggcctccgccaccaacttcgtccccgg 833
>gb| AY086905.1 | Arabidopsis thaliana clone 29298 mRNA, complete sequence
Length = 1041
Score = 137 bits (69), Expect = 5e-29
Identities = 183/221 (82%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||||| ||||| ||||||||||| |||||||| |||||||| ||||| | || |||
Sbjct: 269 agctaccttaccggagagttccctggagactacggatgggacacagctggtctatccgct 328
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
||||||||||| ||||| | |||||| ||||| || || |||||| || | |||||||||
Sbjct: 329 gaccccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggccatg 388
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
|| ||||| || |||||||||||||| || | ||||| | ||||| || ||||| ||
Sbjct: 389 ctcggagccctaggctgcgtcttccctgaacttttggccaggaacggagtcaagtttgga 448
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcga 455
||||| |||||||||||||| || || |||||||| |||||
Sbjct: 449 gaggcagtttggttcaaggctggttcacagatctttagcga 489
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 761 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 820
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 821 gtcaacaacaacgcttgggcctttgccaccaactttgttcccgg 864
>emb| X68682.1 |ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding
protein
Length = 1126
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| ||||||||||| ||||| || || || | || || |||
Sbjct: 232 tacctgaccggcgagttccccggcgactacgggtgggagaccgccggcgtctcggccgac 291
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| ||||| ||||||||||||||||||| ||| ||||| |||||
Sbjct: 292 ccggagacattcgcgcgcaaccgggagctggaggtgatccactcccggtgggcgatgctg 351
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||||| ||||| ||| | |||||| |||||||| |||||||| |||
Sbjct: 352 ggcgcgctgggctgcgtgttcccggagatcctggccaagaacggcgtcaagttcggcgag 411
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||||| ||||||||||| ||
Sbjct: 412 gcggtgtggttcaaggccggcgcgcagatcttctcggagggcgggctggactacctgggg 471
Query: 478 aaccc 482
|||||
Sbjct: 472 aaccc 476
Score = 85.7 bits (43), Expect = 2e-13
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 721 gccatcgtcaccggcaagggccccatcgagaacctcttcgaccacgtcgccgaccccgtc 780
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||||| |||||| |||||||| |||||||
Sbjct: 781 gccaacaacgcctgggcatacgccacgaacttcgtccccggca 823
>gb| AF061577.1 |AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA,
nuclear gene encoding chloroplast protein, complete cds
Length = 1027
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| || |||||||| |||||||| || ||| | || || |||
Sbjct: 236 tacctgaccggagagttcccgggagactacgggtgggacacggcggggctatcggccgac 295
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | |||| | ||||||||||||||||||| || ||||| |||||
Sbjct: 296 ccggagacgttcgcgaggaacagggagctggaggtgatccactcgcggtgggcgatgctg 355
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||||||||||| ||| | ||| || ||||| ||||||||||| |||
Sbjct: 356 ggggcgctgggctgcgtcttcccggagatcctgtccaagaacggggtgaagttcggggag 415
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||| || || |||||||| ||
Sbjct: 416 gcggtgtggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctgggg 475
Query: 478 aaccc 482
|||||
Sbjct: 476 aaccc 480
Score = 93.7 bits (47), Expect = 7e-16
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 725 gccatcgtcaccggcaagggccccatcgagaacctcttcgaccacgtcgccgaccccgtc 784
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||||| ||||||||||||||| |||||||
Sbjct: 785 gccaacaacgcctgggcatacgccaccaacttcgtccccggca 827
>gb| L07119.1 |COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll
A/B-binding protein gene, complete cds
Length = 1260
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
||||||||||||||||||| ||||| ||||||||||||||||| | || ||||| ||||
Sbjct: 400 tgaccggtgagttccctggtgactatggttgggacactgctggactctcagctgatcccg 459
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
||||||| || | |||||| ||||| || || || |||||| | ||||||||| | ||||
Sbjct: 460 agacctttgctaggaaccgtgagctcgaagtcattcactgcagatgggccatgttgggag 519
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || || || ||||| ||| || |||| | ||||| || ||||||||||| ||||
Sbjct: 520 ctcttgggtgtgttttccctgagctgttggctaggaacggtgtcaagttcggtgaagctg 579
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| |||||||||||||| || || |||||||| ||||| || || |||||| | || ||||
Sbjct: 580 tatggttcaaggccgggtctcaaatcttcagtgagggtggacttgactacttgggtaacc 639
Query: 482 caagc 486
|||||
Sbjct: 640 caagc 644
Score = 65.9 bits (33), Expect = 1e-07
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||| ||||| ||||| ||| | |||||| | |||||||| || || ||||| |||
Sbjct: 885 gccatcgtgaccggaaagggaccattggagaacttggctgaccaccttgctgacccagtc 944
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| ||||| | ||||||||||| || |||||
Sbjct: 945 aacaacaatgcttgggcctatgccaccaactttgtccccgg 985
>ref| NM_128995.2 | Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1)
mRNA, complete cds
Length = 1008
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 249 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 308
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 309 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 368
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 369 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 428
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 429 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 488
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 489 ttggactacttgggcaaccc 508
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 756 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 815
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 816 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 856
>ref| NM_102731.2 | Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3);
chlorophyll binding AT1G29910 (CAB3) mRNA, complete cds
Length = 1020
Score = 135 bits (68), Expect = 2e-28
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| | ||
Sbjct: 252 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 311
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
||||| |||||||| ||||| | |||||| ||||| || || |||||| || | |||||
Sbjct: 312 gctgatcccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggct 371
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| | ||||| || ||||||
Sbjct: 372 atgctcggagccctaggctgcgtcttccctgagcttttggctaggaacggagtcaagttc 431
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 432 ggagaggcggtttggttcaaggccggttcacagatctttagcga 475
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||| ||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 747 caagccattgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 806
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 807 gtcaacaacaacgcatgggccttcgcaaccaactttgttcccgg 850
>gb| AF339687.1 | Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
binding protein (At2g34430) mRNA, complete cds
Length = 851
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 187 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 246
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 247 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 306
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 307 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 366
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 367 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 426
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 427 ttggactacttgggcaaccc 446
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 694 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 753
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 754 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 794
>gb| AF326864.1 | Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
binding protein (At2g34430) mRNA, complete cds
Length = 1019
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 249 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 308
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 309 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 368
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 369 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 428
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 429 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 488
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 489 ttggactacttgggcaaccc 508
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 756 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 815
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 816 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 856
>gb| AY120776.1 | Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
binding protein. (At2g34430) mRNA, complete cds
Length = 1003
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 249 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 308
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 309 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 368
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 369 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 428
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 429 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 488
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 489 ttggactacttgggcaaccc 508
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 756 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 815
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 816 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 856
>gb| AY114594.1 | Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910)
mRNA, complete cds
Length = 870
Score = 135 bits (68), Expect = 2e-28
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| | ||
Sbjct: 199 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 258
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
||||| |||||||| ||||| | |||||| ||||| || || |||||| || | |||||
Sbjct: 259 gctgatcccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggct 318
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| | ||||| || ||||||
Sbjct: 319 atgctcggagccctaggctgcgtcttccctgagcttttggctaggaacggagtcaagttc 378
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 379 ggagaggcggtttggttcaaggccggttcacagatctttagcga 422
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||| ||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 694 caagccattgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 753
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 754 gtcaacaacaacgcatgggccttcgcaaccaactttgttcccgg 797
>gb| AY065165.1 | Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910;
F1N18.5) mRNA, complete cds
Length = 1019
Score = 135 bits (68), Expect = 2e-28
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| | ||
Sbjct: 252 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 311
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
||||| |||||||| ||||| | |||||| ||||| || || |||||| || | |||||
Sbjct: 312 gctgatcccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggct 371
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| | ||||| || ||||||
Sbjct: 372 atgctcggagccctaggctgcgtcttccctgagcttttggctaggaacggagtcaagttc 431
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 432 ggagaggcggtttggttcaaggccggttcacagatctttagcga 475
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||| ||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 747 caagccattgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 806
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 807 gtcaacaacaacgcatgggccttcgcaaccaactttgttcccgg 850
>gb| AF330793.1 |AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein
precursor (cabII-2) mRNA, complete cds
Length = 1068
Score = 135 bits (68), Expect = 2e-28
Identities = 200/244 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
||||||||| || |||||||| ||||||||||| |||||||| || || |||| |||||
Sbjct: 177 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 236
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||||||| |||||||||||||| |||||||| ||| |||||||||||
Sbjct: 237 cccggagaccttcaagcgctaccgcgagctggagctgatccacgcccgctgggccatgct 296
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || |||||| || ||||||| |||||||| |||||| | |||||||||
Sbjct: 297 gggcgctctgggctgcatcacccccgagctgctggccaagaacggcatcccgttcggtga 356
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| |||||||||||||| ||||||||||| |||||||||||| ||||||| ||
Sbjct: 357 ggctgtctggttcaaggccggcgcccagatcttcgctgagggcggcctgaactacctcgg 416
Query: 477 caac 480
||||
Sbjct: 417 caac 420
>emb| X64459.1 |ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b
binding protein
Length = 1301
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 487 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 546
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 547 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 606
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 607 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 666
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 667 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 726
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 727 ttggactacttgggcaaccc 746
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 994 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 1053
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 1054 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 1094
>emb| X03908.1 |ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophyll a/b binding protein
Length = 1060
Score = 135 bits (68), Expect = 2e-28
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 232 ccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtct 291
||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| | ||
Sbjct: 405 ccgagctaccttaccggagagttccccggagactacggatgggacaccgctggactttca 464
Query: 292 gctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggcc 351
||||| |||||||| ||||| | |||||| ||||| || || |||||| || | |||||
Sbjct: 465 gctgatcccgagacattcgcaaggaaccgtgagctagaagttatccacagcaggtgggct 524
Query: 352 atgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttc 411
||||| ||||| || |||||||||||||| ||| | |||| | ||||| || ||||||
Sbjct: 525 atgctcggagccctaggctgcgtcttccctgagcttttggctaggaacggagtcaagttc 584
Query: 412 ggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|| ||||| ||||||||||||||||| || |||||||| |||||
Sbjct: 585 ggagaggcggtttggttcaaggccggttcacagatctttagcga 628
Score = 87.7 bits (44), Expect = 4e-14
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||||||||| || ||||| || | |||||||| ||||||||| | ||||| ||
Sbjct: 900 caagccatcgtcactggtaagggaccgatagagaaccttgctgaccatttggccgatcca 959
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 960 gtcaacaacaacgcatgggccttcgcaaccaactttgttcccgg 1003
>gb| BT002103.1 | Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
binding protein. (At2g34430) mRNA, complete cds
Length = 853
Score = 135 bits (68), Expect = 2e-28
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 187 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 246
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 247 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 306
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 307 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 366
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
||||||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 367 gtgaagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 426
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 427 ttggactacttgggcaaccc 446
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 694 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 753
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 754 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 794
>dbj| AK061619.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full
insert sequence
Length = 650
Score = 133 bits (67), Expect = 8e-28
Identities = 94/103 (91%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 279 gccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtc 338
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 339 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 381
Score = 46.1 bits (23), Expect = 0.14
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 449 tcagcgagggcggcctggactaccttggcaacccaagcc 487
||||||||||||| || |||||||| |||||||| ||||
Sbjct: 1 tcagcgagggcgggctcgactacctcggcaacccgagcc 39
>gb| AY171229.1 | Chlamydomonas reinhardtii light-harvesting complex II protein
(Lhcb) mRNA, complete cds; nuclear gene for chloroplast
product
Length = 1024
Score = 131 bits (66), Expect = 3e-27
Identities = 213/262 (81%)
Strand = Plus / Plus
Query: 221 ctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactg 280
|||| |||||||||||||||||||| || |||||||| || |||||||| |||||||| |
Sbjct: 181 ctggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 240
Query: 281 ctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccact 340
| || |||| |||||||| ||||||||| |||||||||||||| ||||||||
Sbjct: 241 ccggtctgtccgctgacccggagaccttcaagcgctaccgcgagctggagctgatccacg 300
Query: 341 gccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacg 400
||| ||||||||||| || || || |||||| ||||||||||| |||||| | |||
Sbjct: 301 cccgctgggccatgctcggcgctctgggctgcatcttccccgagctgctgggctcctacg 360
Query: 401 gcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcg 460
||||| ||||| ||||| || ||||||||||| || | ||||||||| |||||||
Sbjct: 361 gcgtgcccttcggcgaggccgtgtggttcaaggctggtgctcagatcttccaggagggcg 420
Query: 461 gcctggactaccttggcaaccc 482
| ||||||||||| ||||||||
Sbjct: 421 gtctggactacctgggcaaccc 442
>gb| AY288914.1 | Brassica oleracea chlorophyll a/b binding protein mRNA, complete
cds; nuclear gene for chloroplast product
Length = 1042
Score = 131 bits (66), Expect = 3e-27
Identities = 189/230 (82%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||| ||||||||||| ||||| ||||||| || |||||||| |||||||| || ||
Sbjct: 265 gagccaccgagctaccttaccggacagttccccggagactacggatgggacaccgcaggt 324
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || | |||||||| |||| | |||||| ||||| || || ||||||||| |
Sbjct: 325 ctctcagccgtacccgagacgttcgtgaggaaccgtgagctagaagttatccactgcagg 384
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtg 405
||||||||||| || || || |||||||||||||| ||| || ||||| | ||||| ||
Sbjct: 385 tgggccatgctcggtgccctaggctgcgtcttcccggagctgttggccaggaacggagtc 444
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcga 455
|||||||| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 445 aagttcggagaggcggtttggttcaaggccggttcgcagatcttcagcga 494
Score = 60.0 bits (30), Expect = 9e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 512 gagaacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgggcattcgccacc 571
||||| || ||||||||| | || || || || ||||||||||||||||| || || |||
Sbjct: 796 gagaatcttgctgaccatttggctgatccagttaacaacaatgcatgggcctttgctacc 855
Query: 572 aacttcgttcccgg 585
||||||||||||||
Sbjct: 856 aacttcgttcccgg 869
>gb| AY617086.1 | Pinus roxburghii chloroplast light harvesting chlorophyll a/b
binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 770
Score = 131 bits (66), Expect = 3e-27
Identities = 201/246 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcaga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | |||||||| |||||||||||||| ||||| |||||
Sbjct: 281 tccagagacttttgcgaagaacagagagctggaagtgatccactgccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||||||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggctagaaatggagttaagttcggtga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 401 ggccgtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 460
Query: 477 caaccc 482
|||||
Sbjct: 461 aaaccc 466
>gb| AY617085.1 | Pinus merkusii chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 770
Score = 131 bits (66), Expect = 3e-27
Identities = 201/246 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcaga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | |||||||| |||||||||||||| ||||| |||||
Sbjct: 281 tccagagacttttgcgaagaacagagagctggaagtgatccactgccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||||||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggcgagaaatggagttaagttcggtga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 401 ggccgtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctagg 460
Query: 477 caaccc 482
|||||
Sbjct: 461 aaaccc 466
>gb| S73603.1 | Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA,
complete cds
Length = 998
Score = 131 bits (66), Expect = 3e-27
Identities = 201/246 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 267 ctacttgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcaga 326
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | |||||||| |||||||||||||| ||||| |||||
Sbjct: 327 tccagagacttttgcgaagaacagagagctggaagtgatccactgccggtgggcaatgct 386
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||| ||
Sbjct: 387 gggcgctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcgggga 446
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||||||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 447 ggccgtgtggttcaaggccggagctcagattttcagcgagggagggcttgactacctggg 506
Query: 477 caaccc 482
|||||
Sbjct: 507 aaaccc 512
Score = 69.9 bits (35), Expect = 9e-09
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| || || || ||||||||||| |||| || || || ||||||||
Sbjct: 757 gccattgtcaccgggaaaggacccatcgagaacctcactgatcacctggctgaccccgtt 816
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 817 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 859
>gb| AF104630.1 |AF104630 Chlamydomonas reinhardtii light harvesting complex II protein
precursor (Lhcb2) mRNA, complete cds
Length = 1200
Score = 131 bits (66), Expect = 3e-27
Identities = 201/246 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
||||||||| || |||||||| ||||||||||| ||||||||||| || |||| |||||
Sbjct: 201 ctacctgactggcgagttccccggcgactacggctgggacactgccggtctgtcggctga 260
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||||||| |||||||||||||| |||||||| ||| ||||| |||||
Sbjct: 261 cccggagaccttcaagcgctaccgcgagctggagctgatccacgcccgctgggctatgct 320
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || |||||| | ||||||| |||||||| | |||| |||||||||||
Sbjct: 321 gggcgccctgggctgcctgacccccgagctgctggccaagagcggcaccaagttcggtga 380
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || |||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 381 ggccgtgtggttcaaggccggcgcccagatcttctctgagggcggcctggactacctggg 440
Query: 477 caaccc 482
||||||
Sbjct: 441 caaccc 446
>dbj| AB051210.1 | Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b
binding protein LhcII-4, complete cds
Length = 988
Score = 131 bits (66), Expect = 3e-27
Identities = 213/262 (81%)
Strand = Plus / Plus
Query: 221 ctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactg 280
|||| |||||||||||||||||||| || |||||||| || |||||||| |||||||| |
Sbjct: 165 ctggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 224
Query: 281 ctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccact 340
| || |||| |||||||| ||||||||| |||||||||||||| ||||||||
Sbjct: 225 ccggtctgtccgctgacccggagaccttcaagcgctaccgcgagctggagctgatccacg 284
Query: 341 gccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacg 400
||| ||||||||||| || || || |||||| ||||||||||| |||||| | |||
Sbjct: 285 cccgctgggccatgctcggcgctctgggctgcatcttccccgagctgctgggctcctacg 344
Query: 401 gcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcg 460
||||| ||||| ||||| || ||||||||||| || | ||||||||| |||||||
Sbjct: 345 gcgtgcccttcggcgaggccgtgtggttcaaggctggtgctcagatcttccaggagggcg 404
Query: 461 gcctggactaccttggcaaccc 482
| ||||||||||| ||||||||
Sbjct: 405 gtctggactacctgggcaaccc 426
>gb| AY617094.1 | Pinus longaeva chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 759
Score = 129 bits (65), Expect = 1e-26
Identities = 204/251 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 210 ctacttgaccggtgagttcccgggtgactacgggtgggacacwgcggggctttcggcgga 269
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| |||||||||||||| ||||| |||||
Sbjct: 270 tccggagacttttgcgaagaacagagaactggaagtgatccactgccggtgggcaatgct 329
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | |||||| |||| || || |||||||| ||
Sbjct: 330 gggcgctctgggttgcgttttcccggagcttctggccagaaatggagtaaagttcgggga 389
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||||| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 390 agctgtgtggttcaaggcgggagctcagattttcagcgagggaggrcttgactacctggg 449
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 450 aaaccctagcc 460
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
||||| |||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 700 gccattgtcaccgggaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 758
>gb| AY617083.1 | Pinus radiata chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 770
Score = 129 bits (65), Expect = 1e-26
Identities = 197/241 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 226 tgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcagatccag 285
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || || |||||| | |||||||| |||||||||||||| ||||| ||||| || |
Sbjct: 286 agacttttgcgaagaacagagagctggaagtgatccactgccggtgggcaatgctgggcg 345
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || ||||| ||||| ||| | ||||| |||| || || |||||||||||||| |
Sbjct: 346 ctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcggtgaggcag 405
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| || ||||
Sbjct: 406 tgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaacc 465
Query: 482 c 482
|
Sbjct: 466 c 466
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| || || || |||||||||||||||| || || |||||||||||
Sbjct: 711 gccatcgtcaccgggaaaggacccatcgagaacctcgctgatcacctggccgaccccgt 769
>gb| AY617081.1 | Pinus echinata chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 762
Score = 129 bits (65), Expect = 1e-26
Identities = 197/241 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 226 tgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcagatccag 285
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || || |||||| | |||||||| |||||||||||||| ||||| ||||| || |
Sbjct: 286 agacttttgcgaagaacagagagctggaagtgatccactgccggtgggcaatgctgggcg 345
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || ||||| ||||| ||| | ||||| |||| || || |||||||||||||| |
Sbjct: 346 ctctgggttgcgttttcccggagcttctggcragaaatggagtaaagttcggtgaggcag 405
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| || ||||
Sbjct: 406 tgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaacc 465
Query: 482 c 482
|
Sbjct: 466 c 466
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctga 525
|||||||||||||| || || || ||||||||||||||||
Sbjct: 711 gccatcgtcaccgggaaaggacccatcgagaacctcgctga 751
>dbj| AK066762.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full
insert sequence
Length = 1106
Score = 129 bits (65), Expect = 1e-26
Identities = 200/245 (81%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| || |||||| | |||||||| || ||| | || || |||
Sbjct: 247 tacctgaccggagagttcccgggagactacaggtgggacacggcggggctatcggccgac 306
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | |||| | ||||||||||||||||||| || ||||| |||||
Sbjct: 307 ccggagacgttcgcgaggaacagggagctggaggtgatccactcgcggtgggcgatgctg 366
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||||||||||| ||| | ||| || ||||| ||||||||||| |||
Sbjct: 367 ggggcgctgggctgcgtcttcccggagatcctgtccaagaacggggtgaagttcggggag 426
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||| || || |||||||| ||
Sbjct: 427 gcggtgtggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctgggg 486
Query: 478 aaccc 482
|||||
Sbjct: 487 aaccc 491
Score = 93.7 bits (47), Expect = 7e-16
Identities = 89/103 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 736 gccatcgtcaccggcaagggccccatcgagaacctcttcgaccacgtcgccgaccccgtc 795
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||||| ||||||||||||||| |||||||
Sbjct: 796 gccaacaacgcctgggcatacgccaccaacttcgtccccggca 838
>gb| AF003128.1 |AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein
(CAB2) mRNA, nuclear gene encoding chloroplast protein,
complete cds
Length = 1027
Score = 129 bits (65), Expect = 1e-26
Identities = 203/249 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||| |||||||| || || || |||||||| ||||||||||||||| | || |||||
Sbjct: 219 ctaccttaccggtgaatttcccggtgactacggctgggacactgctgggctttcggctga 278
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||| || | |||||||| ||||| |||||||| || ||||| ||||| ||| |
Sbjct: 279 ccctgagacttttactaagaaccgtgagctcgaggtgattcattgccgatgggctatgtt 338
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || || |||||||| || | |||| || ||||| || ||||| |||||
Sbjct: 339 gggtgctctaggatgtgtcttcccagaactcttggctcgcaacggtgtcaagtttggtga 398
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| ||||||||||||||| |||||||||| |||||||| || || || ||| | ||
Sbjct: 399 ggctgtctggttcaaggccggagcccagatctttagcgagggtgggcttgattacttggg 458
Query: 477 caacccaag 485
|||||||||
Sbjct: 459 caacccaag 467
Score = 79.8 bits (40), Expect = 1e-11
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 481 ccaagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccc 540
||||||||| || ||||| ||||||||| | |||||||| ||||| || || ||||||||
Sbjct: 705 ccaagccattgtgaccggaaagggtccattggagaaccttgctgatcaccttgccgaccc 764
Query: 541 cgtcaacaacaatgcatgggcattcgccaccaactt 576
|| ||||||||||| ||||| |||||||| |||||
Sbjct: 765 agttaacaacaatgcttgggccttcgccacaaactt 800
>dbj| D00642.1 |RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II
light-harvesting chlorophyll a/b binding protein of
photosystem II (LHCPII), complete cds
Length = 989
Score = 129 bits (65), Expect = 1e-26
Identities = 200/245 (81%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| |||||||| || |||||||| |||||||| || ||| | || || |||
Sbjct: 228 tacctgaccggagagttcccgggagactacgggtgggacacggcggggctatcggccgac 287
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | |||| | ||||||||| ||||||||| || ||||| |||||
Sbjct: 288 ccggagacgttcgcgaggaacagggagctggagttgatccactcgcggtgggcgatgctg 347
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||||||||||| ||| | ||| || ||||| ||||||||||| |||
Sbjct: 348 ggggcgctgggctgcgtcttcccggagatcctgtccaagaacggggtgaagttcggggag 407
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||| || || |||||||| ||
Sbjct: 408 gcggtgtggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctgggg 467
Query: 478 aaccc 482
|||||
Sbjct: 468 aaccc 472
Score = 77.8 bits (39), Expect = 4e-11
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || ||||||||||| ||||| || |||||||||||
Sbjct: 717 gccatcgtcaccggcaagggccccatcgagaacctcttcgaccacgtcaccgaccccgtc 776
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||| ||| ||||||||||||||| |||||||
Sbjct: 777 gccaacaacgcctggtcatacgccaccaacttcgtccccggca 819
>dbj| D00571.1 |PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding
protein, complete cds
Length = 1055
Score = 127 bits (64), Expect = 5e-26
Identities = 193/236 (81%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||||||||| ||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 303 tacctgaccggtgaattccccggtgactacgggtgggacacggcggggctttcggcggat 362
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| |||||| | |||||||| |||||||||| ||| ||||| |||||
Sbjct: 363 ccggagacgttcgcgaagaacagagagctggaagtgatccactcccggtgggcgatgctg 422
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || ||||| ||||| ||||| ||| | || || | || || || ||||||||||||
Sbjct: 423 ggcgctctcgggtgcgtattcccggagcttcttgcgaggaatggagtaaagttcggtgag 482
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacct 473
|| || ||||||||||| ||| | ||||||||||||||||| || || ||||||||
Sbjct: 483 gcggtgtggttcaaggcgggagctcagatcttcagcgagggagggcttgactacct 538
Score = 71.9 bits (36), Expect = 2e-09
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 510 tcgagaacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgggcattcgcca 569
|||||||||| || || || || ||||||||||| ||||||||||| ||||| | |||||
Sbjct: 817 tcgagaaccttgccgatcacctggccgaccccgtgaacaacaatgcctgggcctacgcca 876
Query: 570 ccaacttcgttcccgg 585
|||||||||| |||||
Sbjct: 877 ccaacttcgtccccgg 892
>emb| X58229.1 |NTCAB7 Tobacco CAB7 gene for chlorophyll a/b binding protein
Length = 1656
Score = 127 bits (64), Expect = 5e-26
Identities = 199/244 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||| |||||||||||||| || || || |||||||||||||| | || ||||| || |
Sbjct: 713 tgactggtgagttccctggtgattatgggtgggacactgctggactttcagctgatccag 772
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
| || || || |||||||| ||||| |||||||| ||||| | ||||| ||||||||||
Sbjct: 773 aaacttttgctaagaaccgtgagctagaggtgattcactgtagatgggctatgcttggag 832
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| ||||| || ||||||||||| | |||| || || || || ||||||||||| ||||
Sbjct: 833 ctctcggttgtgtcttccccgaactcttggctcgtaatggtgtcaagttcggtgaagctg 892
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||||| || || ||||||||||| || || |||||| | |||||||
Sbjct: 893 tctggttcaaggctggatctcaaattttcagcgagggtggacttgactacttgggcaacc 952
Query: 482 caag 485
||||
Sbjct: 953 caag 956
>dbj| AB051209.1 | Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b
binding protein LhcII-3, complete cds
Length = 1256
Score = 127 bits (64), Expect = 5e-26
Identities = 199/244 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
||||||||| || |||||||| ||||||||||| |||||||| || || |||| |||||
Sbjct: 193 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 252
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||||||| |||||||| ||||| |||||||| ||| |||||||||||
Sbjct: 253 cccggagaccttcaagcgctaccgcgagttggagctgatccacgcccgctgggccatgct 312
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || |||||| || ||||||| |||||||| |||||| | |||||||||
Sbjct: 313 gggcgctctgggctgcatcacccccgagctgctggccaagaacggcatcccgttcggtga 372
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| |||||||||||||| ||||||||||| |||||||||||| ||||||| ||
Sbjct: 373 ggctgtctggttcaaggccggcgcccagatcttcgctgagggcggcctgaactacctcgg 432
Query: 477 caac 480
||||
Sbjct: 433 caac 436
>dbj| AB051205.1 | Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b
binding protein LhcII-3, complete cds
Length = 1508
Score = 127 bits (64), Expect = 5e-26
Identities = 199/244 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
||||||||| || |||||||| ||||||||||| |||||||| || || |||| |||||
Sbjct: 641 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 700
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||||||| |||||||| ||||| |||||||| ||| |||||||||||
Sbjct: 701 cccggagaccttcaagcgctaccgcgagttggagctgatccacgcccgctgggccatgct 760
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || |||||| || ||||||| |||||||| |||||| | |||||||||
Sbjct: 761 gggcgctctgggctgcatcacccccgagctgctggccaagaacggcatcccgttcggtga 820
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| |||||||||||||| ||||||||||| |||||||||||| ||||||| ||
Sbjct: 821 ggctgtctggttcaaggccggcgcccagatcttcgctgagggcggcctgaactacctcgg 880
Query: 477 caac 480
||||
Sbjct: 881 caac 884
>dbj| AB012640.1 | Nicotiana sylvestris Lhcb1*8 gene for light harvesting chlorophyll
a/b-binding protein, complete cds
Length = 3102
Score = 127 bits (64), Expect = 5e-26
Identities = 199/244 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||| |||||||||||||| || || || |||||||||||||| | || ||||| || |
Sbjct: 2116 tgactggtgagttccctggtgattatgggtgggacactgctggactttcagctgatccag 2175
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
| || || || |||||||| ||||| |||||||| ||||| | ||||| ||||||||||
Sbjct: 2176 aaacttttgctaagaaccgtgagctagaggtgattcactgtagatgggctatgcttggag 2235
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| ||||| || ||||||||||| | |||| || || || || ||||||||||| ||||
Sbjct: 2236 ctctcggttgtgtcttccccgaactcttggctcgtaatggtgtcaagttcggtgaagctg 2295
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||||| || || ||||||||||| || || |||||| | |||||||
Sbjct: 2296 tctggttcaaggctggatctcaaattttcagcgagggtggacttgactacttgggcaacc 2355
Query: 482 caag 485
||||
Sbjct: 2356 caag 2359
>gb| AY617092.1 | Pinus monophylla chloroplast light harvesting chlorophyll a/b
binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 770
Score = 125 bits (63), Expect = 2e-25
Identities = 204/251 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| ||||||||||| ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacactgcggggctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| |||||||||||||| ||||| |||||
Sbjct: 281 tccggagacttttgcgaagaacagagaactggaagtgatccactgccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccrgagcttctggcgagaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||||| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 401 agctgtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 711 gccatcgtcaccgggaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>gb| AF039598.1 | Prunus persica light harvesting chlorophyll A/B binding protein
(Lhcb-Pp2) mRNA, complete cds
Length = 955
Score = 125 bits (63), Expect = 2e-25
Identities = 198/243 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||| ||||| |||||||| |||||||| |||||||||||||| | || || ||||| |
Sbjct: 206 tgactggtgaattccctggtgactacggatgggacactgctggactatccgcagaccctg 265
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || || || ||| | ||||| |||||||||||| |||| |||||||||||||| |
Sbjct: 266 agacatttgcgaaaaacggtgagcttgaggtgatccacagccgatgggccatgcttggtg 325
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || || |||||||| || | ||| | || || || |||||||| |||||||
Sbjct: 326 cactgggatgtgtcttcccagaaatcctgtcaaagaatggtgtcaagttcggcgaggctg 385
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
||||||||||||| ||||| || |||||| |||||| ||||| ||||| ||||||||||
Sbjct: 386 tttggttcaaggctggatctcaaatcttctccgagggtggccttgactatcttggcaacc 445
Query: 482 caa 484
|||
Sbjct: 446 caa 448
>gb| M16887.1 |SIPCAB White campion chlorophyll a/b-binding protein precursor (CAB) mRNA,
partial cds
Length = 642
Score = 125 bits (63), Expect = 2e-25
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| || ||||| ||||| || || |||||||||||||||||||| | || ||||||
Sbjct: 226 taccttacaggtgaattccccggtgattacggttgggacactgctggactctcagctgac 285
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| || || ||||| |||||||| ||||| ||||||||||||||| | ||||| ||||||
Sbjct: 286 ccagaaacattcgctaagaaccgtgagctagaggtgatccactgcagatgggcaatgctt 345
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || || || ||||| ||||||||| | ||||| ||||| || || || || |||
Sbjct: 346 ggtgcccttggatgcgttttccccgagctcctggctaagaacggagtcaaatttggagag 405
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| |||||||||||||| || || ||||| ||| ||||| || || ||||||||||||
Sbjct: 406 gcagtttggttcaaggcagggtctcagatattccaagagggtggtcttgactaccttggc 465
Query: 478 aacccaa 484
|||||||
Sbjct: 466 aacccaa 472
>dbj| AB115771.1 | Physcomitrella patens subsp. patens PpLhcb1 gene for light-harvesting
chlorophyll a/b-binding protein 1, complete cds
Length = 1975
Score = 123 bits (62), Expect = 7e-25
Identities = 203/250 (81%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||| |||||||||| |||| |||||||| |||||||| || || | || | |||
Sbjct: 1256 tacctgaacggtgagttcgctggagactacggctgggacaccgccggactctcgtcggac 1315
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
||||||||||||||| ||| | ||| ||||||| |||||| ||| |||||||||||
Sbjct: 1316 cccgagaccttcgcccgcaacagggagttggaggtcatccacgcccgctgggccatgctc 1375
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| || || ||| | ||| ||| |||||||| | ||| ||||||||||| |||
Sbjct: 1376 ggagctctggggtgcctgacccctgagctgctggccaagagcggtgtgaagttcggcgag 1435
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || ||||||||||||||| ||||||||||||||||||| || |||||||| | |||
Sbjct: 1436 gccgtgtggttcaaggccggagcccagatcttcagcgagggaggtttggactacttaggc 1495
Query: 478 aacccaagcc 487
||||| ||||
Sbjct: 1496 aaccctagcc 1505
Score = 65.9 bits (33), Expect = 1e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 547 caacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| |||||||||| |||||||||||||||||||||||
Sbjct: 1807 caacaacgcatgggcatacgccaccaacttcgttcccggca 1847
Score = 44.1 bits (22), Expect = 0.54
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 aggctcgcgtcaccatgcgcaa 140
||||||||||||||||||||||
Sbjct: 762 aggctcgcgtcaccatgcgcaa 783
>emb| X02357.1 |PECAB13 Petunia gene for chlorophyll a/b binding protein cab 13
Length = 1019
Score = 123 bits (62), Expect = 7e-25
Identities = 215/266 (80%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| |||| |||||| |||| |||||||||||||| ||||| || ||||| |||
Sbjct: 308 tctggtgaggccccaagctacttgactggtgagttccctggtgactatggatgggatact 367
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || || ||||| | || |||||||||||||| | |||||||| ||||||
Sbjct: 368 gctggactttcagccgacccagcaactttcgccaagaaccggaaactggaggtaatccac 427
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
|| | ||| ||||||||||||| || || ||||||||||| ||| | | ||||| ||
Sbjct: 428 tgtagatggaccatgcttggagctcttggttgcgtcttccctgagctctttgcccgtaat 487
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || ||||| ||||| ||||| ||||||||||| ||||| || || |||| |||||
Sbjct: 488 ggtgtcaagtttggtgaagctgtatggttcaaggctggatctcaaatattcaaagagggt 547
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 548 ggacttgactacttgggcaacccaag 573
Score = 65.9 bits (33), Expect = 1e-07
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| || |||||||| || |||||| | |||||||||||||| || || || ||||||
Sbjct: 812 caagctattgtcaccggaaaaggtccattggagaacctcgctgatcaccttgctgacccc 871
Query: 542 gtcaacaacaatgcatgggcattcgccac 570
|| ||||||||||| ||||| || |||||
Sbjct: 872 gttaacaacaatgcgtgggcctttgccac 900
>emb| AJ234427.1 |HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni
Length = 312
Score = 123 bits (62), Expect = 7e-25
Identities = 123/142 (86%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 167 cctccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtg 226
||||| ||||||||||||||||| | ||||| |||||||||||||||||||| || || |
Sbjct: 172 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 231
Query: 227 agcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggt 286
|||||||||||||||| | ||| ||||| || ||||| ||||| |||||||| || |||
Sbjct: 232 agcccccgagctacctcagcggcgagtt-ccgggcgattacggctgggacaccgcagggg 290
Query: 287 tgtctgctgaccccgagacctt 308
| ||||||||||| ||||||||
Sbjct: 291 tctctgctgacccggagacctt 312
>emb| X14506.1 |PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein
Length = 1006
Score = 123 bits (62), Expect = 7e-25
Identities = 200/246 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 276 ctacttgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcaga 335
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| |||| || || |||||| | |||||||| |||||||||||||| ||||| |||||
Sbjct: 336 tccagagaattttgcgaagaacagagagctggaagtgatccactgccggtgggcaatgct 395
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||||||
Sbjct: 396 gggcgctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcggtga 455
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 456 ggccgtctggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 515
Query: 477 caaccc 482
|||||
Sbjct: 516 aaaccc 521
Score = 77.8 bits (39), Expect = 4e-11
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| || || || |||||||||||||||| || || || ||||||||
Sbjct: 766 gccattgtcaccgggaaaggacccatcgagaacctcgctgatcacctggctgaccccgtt 825
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||||| || ||||| | ||||||||||||||| |||||||
Sbjct: 826 aacaacaacgcctgggcctacgccaccaacttcgtccccggca 868
>dbj| AP008949.1 | Lotus japonicus genomic DNA, chromosome 2, clone:LjT44M23, TM1572a,
complete sequence
Length = 48924
Score = 123 bits (62), Expect = 7e-25
Identities = 107/122 (87%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||| ||||| |||||||| |||||||| |||||||| ||||| || || ||||||
Sbjct: 40107 tacctgactggtgaattccctggtgactacggatgggacacagctggattatcagctgac 40166
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
||||| ||||||||||||||||| ||||| |||||||| ||| || | ||||||||||||
Sbjct: 40167 cccgaaaccttcgccaagaaccgtgagctcgaggtgattcacagcagatgggccatgctt 40226
Query: 358 gg 359
||
Sbjct: 40227 gg 40228
Score = 48.1 bits (24), Expect = 0.035
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
||||||||||| || ||||||||||| || ||||||||||| ||||| ||||| |||
Sbjct: 40278 ttcggtgaggcagtgtggttcaaggctggtgcccagatcttctctgagggtggccttgac 40337
Query: 469 taccttggcaacccaa 484
|| | ||||||||||
Sbjct: 40338 tatttaggcaacccaa 40353
>dbj| AB051208.1 | Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b
binding protein LhcII-1.3, complete cds
Length = 1107
Score = 123 bits (62), Expect = 7e-25
Identities = 200/246 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
||||||||| || |||||||| ||||||||||| |||||||| || || |||| |||||
Sbjct: 223 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 282
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||||||| |||||||||||||| |||||||| ||| ||||| |||||
Sbjct: 283 cccggagaccttcaagcgctaccgcgagctggagctgatccacgcccgctgggctatgct 342
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || |||||| || ||||||| |||||||| | |||| ||||||| ||
Sbjct: 343 gggcgctctgggctgcatcacccccgagctgctggccaagagcggcacccagttcggcga 402
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| |||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 403 ggctgtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctggg 462
Query: 477 caaccc 482
||||||
Sbjct: 463 caaccc 468
>dbj| AB051204.1 | Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b
binding protein LhcII-1.3, complete cds
Length = 1835
Score = 123 bits (62), Expect = 7e-25
Identities = 200/246 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
||||||||| || |||||||| ||||||||||| |||||||| || || |||| |||||
Sbjct: 851 ctacctgactggcgagttccccggcgactacggctgggacaccgccggtctgtcggctga 910
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||||||| |||||||||||||| |||||||| ||| ||||| |||||
Sbjct: 911 cccggagaccttcaagcgctaccgcgagctggagctgatccacgcccgctgggctatgct 970
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || |||||| || ||||||| |||||||| | |||| ||||||| ||
Sbjct: 971 gggcgctctgggctgcatcacccccgagctgctggccaagagcggcacccagttcggcga 1030
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
|||||| |||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 1031 ggctgtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctggg 1090
Query: 477 caaccc 482
||||||
Sbjct: 1091 caaccc 1096
>emb| AJ313013.1 |PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein
Length = 1197
Score = 121 bits (61), Expect = 3e-24
Identities = 196/241 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 296 tgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcagatccag 355
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || || |||||| | |||||||| ||||||||| |||| ||||| ||||| || |
Sbjct: 356 agacttttgcgaagaacagagagctggaagtgatccacagccggtgggcaatgctgggcg 415
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || ||||| ||||| ||| | ||||| |||| || || |||||||||||||| |
Sbjct: 416 ctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcggtgaggccg 475
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| || ||||
Sbjct: 476 tgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaacc 535
Query: 482 c 482
|
Sbjct: 536 c 536
Score = 77.8 bits (39), Expect = 4e-11
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| || || || |||||||||||||||| || || |||||||||||
Sbjct: 781 gccatcgtcaccgggaaaggacccatcgagaacctcgctgatcacctggccgaccccgtt 840
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
| |||||| || ||||| | |||||||||||||| |||||||
Sbjct: 841 agcaacaacgcctgggcctatgccaccaacttcgtccccggca 883
>gb| AY617084.1 | Pinus contorta chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 770
Score = 121 bits (61), Expect = 3e-24
Identities = 196/241 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 226 tgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcagatccag 285
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || || |||||| | |||||||| ||||||||| |||| ||||| ||||| || |
Sbjct: 286 agacttttgcgaagaacagagagctggaagtgatccacagccggtgggcaatgctgggcg 345
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || ||||| ||||| ||| | ||||| |||| || || |||||||||||||| |
Sbjct: 346 ctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcggtgaggccg 405
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| || ||||
Sbjct: 406 tgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaacc 465
Query: 482 c 482
|
Sbjct: 466 c 466
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| || || || |||||||||||||||| || || |||||||||||
Sbjct: 711 gccatcgtcaccgggaaaggacccatcgagaacctcgctgatcacctggccgaccccgt 769
>gb| AY617082.1 | Pinus ponderosa chloroplast light harvesting chlorophyll a/b
binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 770
Score = 121 bits (61), Expect = 3e-24
Identities = 196/241 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 226 tgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcagatccag 285
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || || |||||| | |||||||| |||||||||||||| ||||| ||||| || |
Sbjct: 286 agacttttgcgaagaacagagagctggaagtgatccactgccggtgggcaatgctgggcg 345
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || ||||| ||||| ||| | ||||| |||| || || |||||||| ||||| |
Sbjct: 346 ctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcggggaggccg 405
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| || ||||
Sbjct: 406 tgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaacc 465
Query: 482 c 482
|
Sbjct: 466 c 466
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| || || || |||||||||||||||| || || |||||||||||
Sbjct: 711 gccatcgtcaccgggaaaggacccatcgagaacctcgctgatcacctggccgaccccgt 769
>emb| Z75663.1 |AGCHLABBP A.graveolens mRNA for chlorophyll a/b binding protein
Length = 963
Score = 121 bits (61), Expect = 3e-24
Identities = 202/249 (81%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| || |||||||| || || ||||| || ||||||||||||||| | || ||||||
Sbjct: 241 taccttactggtgagtttccaggtgactatggctgggacactgctgggctttcggctgac 300
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| || ||||||||||| || || || |||||||||| | | ||||||||||||
Sbjct: 301 cctgagacttttgccaagaaccgtgaacttgaagtgatccactccagatgggccatgctt 360
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| || || || |||||||| ||| | |||| || || || || ||||| || |||
Sbjct: 361 ggagcccttgggtgtgtcttccctgagctcttggctcgtaatggtgtcaagtttggcgag 420
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || ||||| ||||| ||||| || |||||||||||||| || || |||||| | ||
Sbjct: 421 gcagtgtggtttaaggctggatcacaaatcttcagcgagggtggacttgactacttgggt 480
Query: 478 aacccaagc 486
|||||||||
Sbjct: 481 aacccaagc 489
Score = 63.9 bits (32), Expect = 6e-07
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 494 accggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaacaacaat 553
||||| ||||||||| | |||||| | |||||||| || || ||||| || |||||||||
Sbjct: 739 accggaaagggtccattagagaacttggctgaccaccttgcagaccctgttaacaacaat 798
Query: 554 gcatgggcattcgccaccaacttcgttcccgg 585
|| ||||| || ||||| ||||| ||||||||
Sbjct: 799 gcctgggcctttgccactaactttgttcccgg 830
>emb| AJ309102.1 |PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding
protein type I
Length = 684
Score = 121 bits (61), Expect = 3e-24
Identities = 181/221 (81%)
Strand = Plus / Plus
Query: 262 gactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaaccgc 321
|||||||| |||||||| || ||| | || || |||||||||||||||||||| || |
Sbjct: 18 gactacgggtgggacaccgccgggctctcggccgaccccgagaccttcgccaaaaataga 77
Query: 322 gagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttcccc 381
||||||||||||||||||||| | ||||||||| | || |||||||||||||| |||||
Sbjct: 78 gagctggaggtgatccactgcagatgggccatgttgggggcgctcggctgcgttttcccg 137
Query: 382 gagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccggatcc 441
||| || ||||| |||||| ||||| || || || || || |||||||||||||| |
Sbjct: 138 gagctgttggccaaaaacggggtgaaatttggggaagccgtgtggttcaaggccggggcg 197
Query: 442 cagatcttcagcgagggcggcctggactaccttggcaaccc 482
||||| ||| ||||| ||||| |||||||| || |||||
Sbjct: 198 cagatattctcagagggaggcctcgactacctggggaaccc 238
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 547 caacaatgcatgggcattcgccaccaacttcgttcccggca 587
||||||||| ||||| | ||||||||| |||||||||||||
Sbjct: 545 caacaatgcctgggcctacgccaccaatttcgttcccggca 585
>emb| X67714.1 |PCCABA P.contorta cab gene for chlorophyll a/b binding protein
Length = 2574
Score = 121 bits (61), Expect = 3e-24
Identities = 196/241 (81%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||||||||||||||| || |||||||| |||||||| || ||| | || || || || |
Sbjct: 1374 tgaccggtgagttccccggtgactacgggtgggacacggcggggctttcggcagatccag 1433
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || || |||||| | |||||||| ||||||||| |||| ||||| ||||| || |
Sbjct: 1434 agacttttgcgaagaacagagagctggaagtgatccacagccggtgggcaatgctgggcg 1493
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| || || ||||| ||||| ||| | ||||| |||| || || |||||||||||||| |
Sbjct: 1494 ctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcggtgaggccg 1553
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| || ||||
Sbjct: 1554 tgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaacc 1613
Query: 482 c 482
|
Sbjct: 1614 c 1614
Score = 77.8 bits (39), Expect = 4e-11
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||| || || || |||||||||||||||| || || |||||||||||
Sbjct: 1859 gccatcgtcaccgggaaaggacccatcgagaacctcgctgatcacctggccgaccccgtt 1918
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
| |||||| || ||||| | |||||||||||||| |||||||
Sbjct: 1919 agcaacaacgcctgggcctatgccaccaacttcgtccccggca 1961
>gb| AF022739.1 |AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds
Length = 1100
Score = 121 bits (61), Expect = 3e-24
Identities = 199/245 (81%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| ||||||| || |||||||| |||||||| || ||| | || || |||
Sbjct: 243 tacctgaccggaaagttcccgggagactacgggtgggacacggcggggctatcggccgac 302
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | |||| | ||||||||||||||||||| ||| ||||| |||||
Sbjct: 303 ccggagacgttcgcgaggaacagggagctggaggtgatccactcccggtgggcaatgctg 362
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| ||||| |||||| ||||||||||| | ||| || ||||| || || ||||| |||
Sbjct: 363 ggggcgctgggctgcttcttccccgagatcctgtccaagaacggggttaatttcggggag 422
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || |||||||||||||| | ||||||||| |||||| || || |||||||| ||
Sbjct: 423 gcggtgtggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctgggg 482
Query: 478 aaccc 482
|||||
Sbjct: 483 aaccc 487
Score = 61.9 bits (31), Expect = 2e-06
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||||||||||||||| || |||||||| | ||||| ||||||||||||||
Sbjct: 732 gccatcgtcaccggcaagggccccatcgagaactttttcgaccacgtcgccgaccccgtc 791
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||||| ||||||||| || || |||||||
Sbjct: 792 gccaacaacgcctgggcatacgccaccaattttgtccccggca 834
>gb| AY086307.1 | Arabidopsis thaliana clone 23727 mRNA, complete sequence
Length = 979
Score = 119 bits (60), Expect = 1e-23
Identities = 210/260 (80%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 249 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 308
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 309 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 368
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 369 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 428
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
|| ||||||| || || |||||||||||||| || || |||||||||||||| || ||
Sbjct: 429 gtagagttcggagaagcggtttggttcaaggctggttcacagatcttcagcgacggagga 488
Query: 463 ctggactaccttggcaaccc 482
|||||||| | ||||||||
Sbjct: 489 ttggactacttgggcaaccc 508
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 756 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 815
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 816 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 856
>dbj| AB012636.1 | Nicotiana sylvestris Lhcb1*1 gene for light harvesting chlorophyll
a/b-binding protein, complete cds
Length = 3659
Score = 119 bits (60), Expect = 1e-23
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 235 agctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgct 294
|||||| ||||| |||| |||||||| || || || ||||| |||||||| | || ||
Sbjct: 335 agctacttgaccagtgaattccctggtgattatgggtgggatactgctggactttcagca 394
Query: 295 gaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatg 354
|| || || ||||| ||||||||||| || || ||||||||||||||| | ||||| |||
Sbjct: 395 gatccagaaacctttgccaagaaccgtgaactcgaggtgatccactgcagatgggctatg 454
Query: 355 cttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggt 414
||||| || || || || |||||||| ||| | |||| || ||||| || ||||| ||
Sbjct: 455 cttggtgctcttggatgtgtcttccctgagctcttggctcgtaacggtgtcaagtttggc 514
Query: 415 gaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactacctt 474
|| ||||| ||||||||||| |||||||| ||||| |||||||| || || |||||| |
Sbjct: 515 gaagctgtctggttcaaggctggatcccaaatctttagcgagggtggacttgactacttg 574
Query: 475 ggcaacccaagc 486
||||||||||||
Sbjct: 575 ggcaacccaagc 586
Score = 63.9 bits (32), Expect = 6e-07
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
|||||||| || ||||| ||||| ||| | |||||||| |||||||| || || |||||
Sbjct: 824 caagccattgttaccggaaagggcccattagagaaccttgctgaccaccttgcagaccca 883
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| ||||||||||| ||||| | |||||| ||||| || |||||
Sbjct: 884 gttaacaacaatgcttgggcgtacgccacaaactttgtccccgg 927
>emb| X54090.1 |GHCAB G.hirsutum cab gene for chlorophyll ab binding protein
Length = 1746
Score = 117 bits (59), Expect = 4e-23
Identities = 122/143 (85%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||||||||| |||||||| |||||||| ||||| |||||||| || || ||||||
Sbjct: 745 tacctgaccggtgaattccctggggactacgggtgggatactgctggattatcagctgac 804
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| || ||||||||||| ||||| |||||||||||||| | ||||| ||||||
Sbjct: 805 ccagagacatttgccaagaaccgtgagcttgaggtgatccactgtaggtgggctatgctt 864
Query: 358 ggagcgctcggctgcgtcttccc 380
|| || || ||||| || |||||
Sbjct: 865 ggtgcccttggctgtgttttccc 887
Score = 69.9 bits (35), Expect = 9e-09
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| ||||| |||||||||||||| || ||||| |||||| |||||| |||||
Sbjct: 913 aagttcggagaggcggtttggttcaaggctggttcccaaatcttctccgagggtggcctt 972
Query: 466 gactaccttggcaacccaa 484
||||| || ||||||||||
Sbjct: 973 gactatctcggcaacccaa 991
>gb| AY617093.1 | Pinus remota chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 770
Score = 117 bits (59), Expect = 4e-23
Identities = 203/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| ||||||||||| ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacactgcggggctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || |||| |||||||||||||| ||||| |||||
Sbjct: 281 tccggagacttttgcgaagaacagagaattggaagtgatccactgccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||||| ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 401 agctgtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 711 gccatcgtcaccgggaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>gb| AF247178.1 |AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete
cds; nuclear gene for chloroplast product
Length = 1096
Score = 117 bits (59), Expect = 4e-23
Identities = 149/179 (83%)
Strand = Plus / Plus
Query: 259 ggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaac 318
||||||||||| |||||||| || ||| | ||||| ||||| |||||||||||||| |||
Sbjct: 300 ggcgactacgggtgggacaccgccgggctctctgccgaccctgagaccttcgccaaaaac 359
Query: 319 cgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttc 378
| |||||||||||||||||| || | ||||||||| | || |||||||||||||| |||
Sbjct: 360 agagagctggaggtgatccacagcagatgggccatgttgggggcgctcggctgcgttttc 419
Query: 379 cccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccgg 437
|| ||| || ||||| || ||| ||||| || || || || || ||||||||||||||
Sbjct: 420 ccggagctgttggccaaaaccggggtgaaatttggggaagccgtgtggttcaaggccgg 478
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 547 caacaatgcatgggcattcgccaccaacttcgttcccggca 587
|||||| || ||||| | ||||||||| |||||||||||||
Sbjct: 829 caacaacgcctgggcctacgccaccaatttcgttcccggca 869
>gb| AF220527.1 |AF220527 Euphorbia esula chlorophyll a/b binding protein precursor, mRNA,
complete cds
Length = 927
Score = 117 bits (59), Expect = 4e-23
Identities = 242/303 (79%)
Strand = Plus / Plus
Query: 169 tccggcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttctggtgag 228
||||||||||| ||||||||| | |||||||| ||| | ||||| | || ||||||
Sbjct: 142 tccggcagcccatggtacggcccagaccgtgttaagtacttgggcccattctccggtgag 201
Query: 229 cccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctgggttg 288
||||| |||||| |||||||||| ||||| || ||||| || ||||||||||| || |
Sbjct: 202 cccccaagctacttgaccggtgaattccccggtgactatggctgggacactgccggactc 261
Query: 289 tctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgg 348
|| |||||||| || ||||| ||||||||||| ||||| || |||||||||| | |||
Sbjct: 262 tcagctgacccagaaacctttgccaagaaccgtgagctcgaagtgatccactcaagatgg 321
Query: 349 gccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaag 408
|| ||||||||||| || || || || ||||| ||| | ||||||| ||||| |||||
Sbjct: 322 gctatgcttggagctcttggatgtgttttcccggagctcttggcccggaacggtgtgaaa 381
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
|| || ||||| || ||||||||||| || || ||||| || || ||||| || || |||
Sbjct: 382 tttggggaggcagtgtggttcaaggcagggtctcagatatttagtgagggtggtctagac 441
Query: 469 tac 471
|||
Sbjct: 442 tac 444
Score = 44.1 bits (22), Expect = 0.54
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 536 gaccccgtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||| || ||||||||||| ||||| || || ||||||||||| |||||
Sbjct: 751 gacccggttaacaacaatgcttgggcttttgcgaccaacttcgtccccgg 800
>emb| X02360.1 |PECAB22R Petunia gene for chlorophyll a/b binding protein cab 22R
Length = 1187
Score = 115 bits (58), Expect = 2e-22
Identities = 214/266 (80%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||| | || |||||| |||| |||||||||||| | ||||| || ||||| |||
Sbjct: 420 tctggtgaggcaccaagctacttgactggtgagttccctagtgactatggatgggatact 479
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||| | || ||||| || || || || ||||||||||| ||||||||||| ||||||
Sbjct: 480 gctggactttcggctgatcctgaaacttttgccaagaaccgtgagctggaggtcatccac 539
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
|| | ||||||||||||||||| || || || |||||||| || | | ||||| ||
Sbjct: 540 tgtagatgggccatgcttggagctcttggttgtgtcttccctgaactctttgcccgtaat 599
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| | || |||||||||||||| ||||||||||| ||| | || || ||||| |||||
Sbjct: 600 ggtatcaaattcggtgaggctgtatggttcaaggctggagctcaaattttcagtgagggt 659
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | |||||||||||
Sbjct: 660 ggacttgactacttgggcaacccaag 685
Score = 48.1 bits (24), Expect = 0.035
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||||||||| ||||||||| | |||||||| || || || || || || || || |||
Sbjct: 930 atcgtcaccggaaagggtccattggagaaccttgccgatcaccttgctgatccagttaac 989
Query: 548 aacaatgcatgg 559
||||||||||||
Sbjct: 990 aacaatgcatgg 1001
>gb| AF495472.1 | Chlamydomonas reinhardtii major light-harvesting complex II protein
m6 mRNA, complete cds; nuclear gene for chloroplast
product
Length = 1094
Score = 113 bits (57), Expect = 7e-22
Identities = 198/245 (80%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||| || |||||||| ||||||||||| |||||||| || || |||| ||||||
Sbjct: 205 tacctgactggcgagttccccggcgactacggctgggacaccgccggcctgtccgctgac 264
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||||||| |||||||||||||| |||||||| ||| ||||| |||||
Sbjct: 265 ccggagaccttcaagcgctaccgcgagctggagctgatccacgcccgctgggctatgctg 324
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || || |||||| ||||||| |||||||| | |||| |||||||| |||
Sbjct: 325 ggcgccctgggctgccagacccccgagctgctggccaagagcggcaccaagttcggcgag 384
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 385 gctgtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggc 444
Query: 478 aaccc 482
|||||
Sbjct: 445 aaccc 449
>gb| AF295639.1 | Beta vulgaris chlorophyll a/b binding protein (cab) gene, partial
cds, nuclear gene for chloroplast product
Length = 507
Score = 113 bits (57), Expect = 7e-22
Identities = 180/221 (81%)
Strand = Plus / Plus
Query: 265 tacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaaccgcgag 324
|||||||||||||||||||| | || |||||||| || ||||| ||||||||||| |||
Sbjct: 6 tacggttgggacactgctggactctcagctgacccagaaacctttgccaagaaccgtgag 65
Query: 325 ctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttccccgag 384
|| ||||||||||| ||| | ||||||||| | || || | || || || ||||| |||
Sbjct: 66 cttgaggtgatccattgcagatgggccatgttgggcgcattaggttgtgtattcccagag 125
Query: 385 ttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccggatcccag 444
||| | ||||| || || || ||||| || |||||||||||||||||||| ||||| ||
Sbjct: 126 ttgttagcccgcaatggtgttaagtttggcgaggctgtttggttcaaggcaggatcacaa 185
Query: 445 atcttcagcgagggcggcctggactaccttggcaacccaag 485
||||| || ||||| || || |||||| | || ||||||||
Sbjct: 186 atctttagtgagggtggacttgactacttgggtaacccaag 226
>gb| U51632.1 |PPU51632 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding
polypeptide (Lhcb2) mRNA, partial cds
Length = 873
Score = 113 bits (57), Expect = 7e-22
Identities = 180/221 (81%)
Strand = Plus / Plus
Query: 262 gactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaaccgc 321
|||||||| |||||||| || ||| | ||||| || ||||||||||||||||| ||| |
Sbjct: 169 gactacgggtgggacacagccgggctctctgccgatcccgagaccttcgccaaaaacaga 228
Query: 322 gagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttcccc 381
||||||||||||||||||| | | ||||||||| | || ||||| |||||||| |||||
Sbjct: 229 gagctggaggtgatccactccagatgggccatgttgggggcgctgggctgcgttttcccg 288
Query: 382 gagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccggatcc 441
||| || ||||| |||||| ||||| || || || || || |||||||||||||| |
Sbjct: 289 gagctgttggccaaaaacggggtgaaatttggggaagccgtgtggttcaaggccggggct 348
Query: 442 cagatcttcagcgagggcggcctggactaccttggcaaccc 482
||||| ||| ||||| ||||| |||||||| || |||||
Sbjct: 349 cagatattctcagagggaggcctcgactacctggggaaccc 389
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 547 caacaatgcatgggcattcgccaccaacttcgttcccggca 587
||||||||| ||||| | ||||||||| |||||||||||||
Sbjct: 696 caacaatgcctgggcctacgccaccaatttcgttcccggca 736
>gb| U01964.1 |GMU01964 Glycine max cv. Dare photosystem II type I chlorophyll a/b-binding
protein (lhcb1*7) gene, complete cds
Length = 1882
Score = 113 bits (57), Expect = 7e-22
Identities = 213/265 (80%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
||||||||||| ||| || || ||||| ||||| || ||||| |||||||||||||||
Sbjct: 941 ggtgagcccccctcctatctcactggtgaattcccaggtgactatggttgggacactgct 1000
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
||| | ||||||||||| ||||| || ||||| ||||| || ||||| || ||||||| |
Sbjct: 1001 gggctttctgctgacccagagacttttgccaaaaaccgtgaactggaagtcatccactcc 1060
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||| | ||||| | ||||| || ||||| || | || |||| |||||
Sbjct: 1061 agatgggccatgttgggagccttgggctgtgttttccctgaactcttgtcccgcaacgga 1120
Query: 403 gtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggc 462
|| ||||| || ||||| || |||||||||||||| || ||||| ||||| ||||| ||
Sbjct: 1121 gtcaagtttggcgaggccgtgtggttcaaggccgggtctcagatattcagtgagggtggg 1180
Query: 463 ctggactaccttggcaacccaagcc 487
|| |||||| | |||||||||||||
Sbjct: 1181 cttgactacttgggcaacccaagcc 1205
Score = 46.1 bits (23), Expect = 0.14
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 515 aacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgggcattcgccaccaac 574
||||| ||||| || || || ||||| |||||||||||||| ||||| | ||||| |||
Sbjct: 1475 aaccttgctgatcaccttgctgacccagtcaacaacaatgcttgggcttatgccacaaac 1534
Query: 575 ttcgttcccgg 585
|| ||||||||
Sbjct: 1535 tttgttcccgg 1545
>gb| J01253.1 |PEACAB15 Pea major chlorophyll a/b-binding thylakoid protein (polypeptide
15) mRNA, clone pAB96
Length = 822
Score = 113 bits (57), Expect = 7e-22
Identities = 198/245 (80%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
||||||| |||||||| || ||||||||||||||||||||||| | ||||| || || |
Sbjct: 96 tgaccggagagttcccaggtgactacggttgggacactgctggactttctgccgatccag 155
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggag 361
|||| || ||||||||||| ||||| || || ||||||| | | ||||| ||| | ||||
Sbjct: 156 agacatttgccaagaaccgtgagcttgaagttatccactccagatgggctatgttgggag 215
Query: 362 cgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctg 421
| | || || |||||||| ||| | || | || ||||| || || |||||||| ||||
Sbjct: 216 ccttgggatgtgtcttcccagagcttttgtctcgcaacggtgttaaattcggtgaagctg 275
Query: 422 tttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaacc 481
| ||||||||||| ||||| || ||||| |||||||| || || |||||| | |||||||
Sbjct: 276 tatggttcaaggcaggatctcaaatctttagcgagggtggacttgactacttgggcaacc 335
Query: 482 caagc 486
|||||
Sbjct: 336 caagc 340
>gb| M24072.1 |CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1)
gene, complete cds
Length = 2290
Score = 113 bits (57), Expect = 7e-22
Identities = 198/245 (80%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||| || |||||||| ||||||||||| |||||||| || || |||| ||||||
Sbjct: 980 tacctgactggcgagttccccggcgactacggctgggacaccgccggcctgtccgctgac 1039
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||||||| |||||||||||||| |||||||| ||| ||||| |||||
Sbjct: 1040 ccggagaccttcaagcgctaccgcgagctggagctgatccacgcccgctgggctatgctg 1099
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || || |||||| ||||||| |||||||| | |||| |||||||| |||
Sbjct: 1100 ggcgccctgggctgccagacccccgagctgctggccaagagcggcaccaagttcggcgag 1159
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 1160 gctgtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggc 1219
Query: 478 aaccc 482
|||||
Sbjct: 1220 aaccc 1224
>gb| AF479779.1 | Chlamydomonas reinhardtii major light-harvesting complex II protein
m7 (Lhcbm7) mRNA, complete cds
Length = 1016
Score = 111 bits (56), Expect = 3e-21
Identities = 188/232 (81%)
Strand = Plus / Plus
Query: 251 agttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttcg 310
||||||| ||||||||||| |||||||| || || |||| |||||||| |||||||||
Sbjct: 205 agttccccggcgactacggctgggacaccgccggtctgtcggctgacccggagaccttca 264
Query: 311 ccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggct 370
|||||||||||||| |||||||| ||| ||||| ||||| || || || ||||
Sbjct: 265 agcgctaccgcgagctggagctgatccacgcccgctgggctatgctgggcgctctgggct 324
Query: 371 gcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttca 430
|| || ||||||| |||||||| | |||| ||||||| |||||||| |||||||
Sbjct: 325 gcatcacccccgagctgctggccaagagcggcacccagttcggcgaggctgtctggttca 384
Query: 431 aggccggatcccagatcttcagcgagggcggcctggactaccttggcaaccc 482
||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 385 aggccggcgcccagatcttctctgagggcggcctggactacctgggcaaccc 436
>emb| AJ000765.1 |CRAJ765 Chlamydomonas reinhardtii mRNA for calreticulin
Length = 2336
Score = 109 bits (55), Expect = 1e-20
Identities = 142/171 (83%)
Strand = Plus / Minus
Query: 221 ctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactg 280
|||| |||||||||||||||||||| || |||||||| || |||||||| |||||||| |
Sbjct: 241 ctggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccg 182
Query: 281 ctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccact 340
| || |||| |||||||| ||||||||| |||||||||||||| ||||||||
Sbjct: 181 ccggcctgtccgctgacccggagaccttcaagcgctaccgcgagctggagctgatccacg 122
Query: 341 gccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctgg 391
||| ||||||||||| || || || |||||| ||||||||||| ||||||
Sbjct: 121 cccgctgggccatgctcggcgctctgggctgcatcttccccgagctgctgg 71
>gb| AY617095.1 | Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 770
Score = 109 bits (55), Expect = 1e-20
Identities = 202/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacacagcggggctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| ||||| |||||| | || |||| |||||||||||||| ||||| |||||
Sbjct: 281 tccggagactttcgcgaagaacagagaattggaagtgatccactgccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | || || |||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttcttgcgagaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 401 ggcagtctggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 711 gccatcgtcaccggaaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>gb| AY617090.1 | Pinus monticola chloroplast light harvesting chlorophyll a/b
binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 770
Score = 109 bits (55), Expect = 1e-20
Identities = 202/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| ||||||||| |||| ||||| |||||
Sbjct: 281 tccggagacatttgcgaagaacagagaactggaagtgatccacagccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| ||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggcgaaaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||||||
Sbjct: 401 ggcagtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactaccttgg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 711 gccatcgtcaccggaaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>gb| AY617089.1 | Pinus lambertiana chloroplast light harvesting chlorophyll a/b
binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 770
Score = 109 bits (55), Expect = 1e-20
Identities = 202/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| ||||||||| |||| ||||| |||||
Sbjct: 281 tccggagacatttgcgaagaacagagaactggaagtgatccacagccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| ||| || || |||||||| ||
Sbjct: 341 gggcgcyctgggttgcgttttcccggagcttctggcgaaaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||||||
Sbjct: 401 ggcagtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactaccttgg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 711 gccatcgtcaccggaaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>gb| AY617088.1 | Pinus flexilis chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 770
Score = 109 bits (55), Expect = 1e-20
Identities = 202/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcaga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| ||||||||| |||| ||||| |||||
Sbjct: 281 tccggagacatttgcgaagaacagagaactggaagtgatccacagccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| ||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggcgaaaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||||||
Sbjct: 401 ggcagtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactaccttgg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 711 gccatcgtcaccggaaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>gb| M97171.1 |SOYCAB6A Glycine max chlorophyll a/b binding protein type II (Cab-6) gene,
complete cds; nuclear gene for chloroplast product
Length = 1322
Score = 109 bits (55), Expect = 1e-20
Identities = 199/247 (80%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||||||||| || ||||| || |||||||| |||||||||||||| | || ||||||
Sbjct: 517 tacctgaccggagaattccccggtgactacggatgggacactgctggactatcagctgac 576
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| || |||||||||| |||||| |||||||||||||| ||| || | ||||||||||||
Sbjct: 577 ccggaaaccttcgccaggaaccgggagctggaggtgattcacagcagatgggccatgctt 636
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
|| || || |||||| |||||| ||| | || | || || ||||| ||||| |||
Sbjct: 637 ggtgcacttggctgcaccttcccagagatccttgagaagaatggtgtgaaattcggcgag 696
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
|| || ||||||||||| || || ||||||||| ||||| || || |||||| | |||
Sbjct: 697 gccgtgtggttcaaggctggttcacagatcttctcggagggaggacttgactacttgggc 756
Query: 478 aacccaa 484
|||||||
Sbjct: 757 aacccaa 763
>emb| BX821952.1 |CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 949
Score = 109 bits (55), Expect = 1e-20
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 226 gagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgctggg 285
||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||| |
Sbjct: 217 gagcccccgagctaccttaccggtgagttccccggtgactacggatgggacaccgcttgt 276
Query: 286 ttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgt 345
| || || ||||| ||||||||||||| |||||| ||||| || || |||||| || |
Sbjct: 277 ctatccgccgacccagagaccttcgccaggaaccgtgagctagaagttatccacagcaga 336
Query: 346 tgggccatgcttggagcgctcggctgcgtcttccc 380
|||||||||| ||||| || |||||||| |||||
Sbjct: 337 agggccatgctcggagccctaggctgcgttttccc 371
Score = 95.6 bits (48), Expect = 2e-16
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 720 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccattttgccgaccca 779
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|| |||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 780 gttaacaacaacgcttgggccttcgccaccaacttcgtccccgg 823
Score = 54.0 bits (27), Expect = 6e-04
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 408 gttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctgga 467
|||||| || || |||| |||||||||||| || |||||||||||||| || || | ||
Sbjct: 401 gttcggagaagcggttttgttcaaggccgggtcacagatcttcagcgacggaggatttga 460
Query: 468 ctaccttggcaaccc 482
|||| ||||||||||
Sbjct: 461 ctactttggcaaccc 475
>emb| X54856.1 |CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein
Length = 1011
Score = 109 bits (55), Expect = 1e-20
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||||||||| |||||||| || |||||||| |||||||||||||| |||| |||||
Sbjct: 203 ctacctgaccggcgagttccccggtgactacggctgggacactgctggtctgtccgctga 262
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 263 ccccgagaccttcaagaagtaccgtgagctggaggtgatccac 305
Score = 65.9 bits (33), Expect = 1e-07
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 406 aagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctg 465
|||||||| ||| | || |||||||||||||| ||||||||||| |||||| ||||||
Sbjct: 375 aagttcggcgagcccgtgtggttcaaggccggtgcccagatcttctccgagggtggcctg 434
Query: 466 gactaccttggca 478
|||||||| ||||
Sbjct: 435 gactacctgggca 447
Score = 48.1 bits (24), Expect = 0.035
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
|||||||| ||||||||||| || || ||||||| |||||||| || || ||||||| |
Sbjct: 696 gccatcgtgaccggcaagggccccatccagaacctggctgaccacctggctgaccccggc 755
Query: 545 aacaacaa 552
| ||||||
Sbjct: 756 accaacaa 763
>gb| AY845253.1 | Pisum sativum light-harvesting chlorophyll-a/b binding protein
Lhcb1 mRNA, complete cds
Length = 801
Score = 107 bits (54), Expect = 4e-20
Identities = 201/250 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||| || |||||||| || |||||||||||||||||||| || | ||||||||
Sbjct: 204 ctacttgactggagagttccccggtgactacggttgggacactgccggactctctgctga 263
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||| ||| |||||||||| ||||| || || ||||||| | | ||||| ||| |
Sbjct: 264 cccagagacattctccaagaaccgtgagcttgaagtcatccactccagatgggctatgtt 323
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || | || || |||||||| ||| | || | || ||||| || || ||||||||
Sbjct: 324 gggtgctttgggatgtgtcttcccagagcttttgtctcgcaacggtgttaaattcggtga 383
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||||| ||||||||||| ||||| || ||||| |||||||| || || |||||| | ||
Sbjct: 384 agctgtatggttcaaggcaggatctcaaatctttagcgagggtggacttgactacttggg 443
Query: 477 caacccaagc 486
||||||||||
Sbjct: 444 caacccaagc 453
Score = 60.0 bits (30), Expect = 9e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 512 gagaacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgggcattcgccacc 571
||||| || ||||| ||||| ||||||| || ||||||||||||||| ||| ||||||
Sbjct: 721 gagaatcttgctgatcatctttccgacccagttaacaacaatgcatggtcatatgccacc 780
Query: 572 aacttcgttcccgg 585
||||| ||||||||
Sbjct: 781 aactttgttcccgg 794
>gb| AF324693.2 |AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete
cds
Length = 1009
Score = 107 bits (54), Expect = 4e-20
Identities = 190/234 (81%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 223 ggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacactgct 282
|||||||| ||||||||||| || || |||||||| || || ||||| |||||||||||
Sbjct: 249 ggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggacactgcc 308
Query: 283 gggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccactgc 342
|| | || || || |||||||||||||| | |||||| ||||| || || |||||| ||
Sbjct: 309 ggtctatccgccgatcccgagaccttcgctaggaaccgtgagctagaagttatccacagc 368
Query: 343 cgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaacggc 402
| ||||||||||| ||||| || |||||||| ||||| ||| | |||| | |||||
Sbjct: 369 agatgggccatgctcggagccctaggctgcgttttccctgagctattggctaggaacgga 428
Query: 403 gtgaagttcggtgaggctgttt-ggttcaaggccggatcccagatcttcagcga 455
||||||||||| || || |||| |||||| ||| || || ||||||||||||||
Sbjct: 429 gtgaagttcggagaagccgtttgggttcagggctggttcacagatcttcagcga 482
Score = 73.8 bits (37), Expect = 6e-10
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtc 544
||||| |||||||| ||||| || | ||||||||||| ||||| | || || || |||
Sbjct: 762 gccattgtcaccggaaagggaccgttggagaacctcgcggaccacttggctgatccagtc 821
Query: 545 aacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 822 aacaacaatgcatgggccttcgctaccaacttcgtccccgg 862
>gb| AY219853.1 | Nicotiana tabacum chlorophyll a/b binding protein mRNA, complete
cds
Length = 946
Score = 107 bits (54), Expect = 4e-20
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| |||||||||||||| || ||||| ||||||||||||||||| | || ||||||
Sbjct: 261 tacctcaccggtgagttcccaggtgactatggttgggacactgctggactctcagctgac 320
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| ||||| | ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 321 ccagagacattcgctagaaaccgtgaacttgaggtgatccattgccgttgggccatgctt 380
Query: 358 gg 359
||
Sbjct: 381 gg 382
Score = 56.0 bits (28), Expect = 1e-04
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
|||||||| ||||||||||||||||| ||| |||| |||||| || || || || |||
Sbjct: 432 ttcggtgaagctgtttggttcaaggcaggagcccaaatcttctcggaaggtggacttgac 491
Query: 469 taccttggcaacccaa 484
||||| ||||||||||
Sbjct: 492 tacctcggcaacccaa 507
>gb| AF279248.1 |AF279248 Vigna radiata LHCII type II chlorophyll a/b-binding protein
(CipLhcb2) mRNA, complete cds; nuclear gene for
chloroplast product
Length = 1033
Score = 107 bits (54), Expect = 4e-20
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
|||||||||||||| |||||||| |||||||| |||||||| ||||| || || ||||||
Sbjct: 258 tacctgaccggtgaattccctggtgactacggatgggacacagctggattatcagctgac 317
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| || ||||| |||| |||||| ||| |||||||||| ||| || | ||||||||||||
Sbjct: 318 cctgaaacctttgccaggaaccgtgagttggaggtgattcacagcagatgggccatgctt 377
Query: 358 gg 359
||
Sbjct: 378 gg 379
>emb| AJ131044.1 |CAR131044 Cicer arietinum mRNA for chlorophyll a/b binding protein
Length = 983
Score = 107 bits (54), Expect = 4e-20
Identities = 213/266 (80%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
||||||||||||||| ||| |||| || |||||||| || ||||| ||||||||||||
Sbjct: 201 tctggtgagcccccgtcgtacttgactggagagttcccaggtgactatggttgggacact 260
Query: 280 gctgggttgtctgctgaccccgagaccttcgccaagaaccgcgagctggaggtgatccac 339
|||||| | ||||||||||| ||||| || || || ||||| || |||||||| ||||||
Sbjct: 261 gctgggctttctgctgacccagagacatttgcgaaaaaccgtgaactggaggtaatccac 320
Query: 340 tgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaac 399
|| | ||||| ||| | ||||| | || || || ||||| ||| | || |||||||
Sbjct: 321 agcaggtgggctatgttgggagcattgggatgtgtgttcccagagcttttgtcccgaaat 380
Query: 400 ggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggc 459
|| || || |||||||| ||||| ||||||||||| ||||| || ||||| || |||||
Sbjct: 381 ggtgttaaattcggtgaagctgtatggttcaaggctggatcacaaatctttagtgagggt 440
Query: 460 ggcctggactaccttggcaacccaag 485
|| || |||||| | || ||||||||
Sbjct: 441 ggacttgactacttgggtaacccaag 466
Score = 79.8 bits (40), Expect = 1e-11
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||| || ||||| || |||||||| | |||||||| ||||||||||| | |||||
Sbjct: 705 caagctattgtcactggaaagggtcctttggagaaccttgctgaccatctttctgaccct 764
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
|||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 765 gtcaacaacaatgcatgggcctatgccaccaactttgttcccgg 808
>emb| X58230.1 |NTCAB36 Tobacco CAB36 gene for chlorophyll a/b binding protein
Length = 1986
Score = 107 bits (54), Expect = 4e-20
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 242 tgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgaccccg 301
|||| ||||||||||| || || ||||| |||||||||||||| | || |||||||| |
Sbjct: 940 tgactggtgagttcccaggtgattacgggtgggacactgctggactttcagctgacccag 999
Query: 302 agaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttgg 359
|||| ||||| | |||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1000 agacattcgctaggaaccgtgagcttgaggtgatccattgccgttgggccatgcttgg 1057
Score = 71.9 bits (36), Expect = 2e-09
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 409 ttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggac 468
||||||||||| |||||||||||||||||||| ||||| ||| || ||||| || |||
Sbjct: 1107 ttcggtgaggcagtttggttcaaggccggatctcagatattctcagaaggcggtcttgac 1166
Query: 469 taccttggcaacccaa 484
|||||||| |||||||
Sbjct: 1167 taccttggtaacccaa 1182
>gb| AF133340.1 |AF133340 Phalaenopsis sp. 'KCbutterfly' putative chlorophyll a/b-binding
protein mRNA, complete cds
Length = 1118
Score = 107 bits (54), Expect = 4e-20
Identities = 180/222 (81%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||||| || || |||||||| || || ||||| |||||||||||||| ||||| || ||
Sbjct: 290 ctacctcactggcgagttccccggtgattacggctgggacactgctggcttgtcggcgga 349
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| || |||||||| ||||| || ||||||||||| ||||||| || ||||||||| |
Sbjct: 350 cccagaaaccttcgctaagaatcgggagctggaggtcatccactcacggtgggccatgtt 409
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||| ||||||| ||| | |||| || || ||||| ||||| || ||
Sbjct: 410 gggtgcactgggttgcatcttcccagagcttttggctcgcaatggcgtaaagtttggcga 469
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgaggg 458
||| || |||||||| || || || |||||||||||||||||
Sbjct: 470 ggcggtgtggttcaaagctggttctcagatcttcagcgaggg 511
>dbj| AB013728.1 | Cryptomeria japonica mRNA for light-harvesting chlorophyll
a/b-binding protein of photosystem II, complete cds
Length = 935
Score = 105 bits (53), Expect = 2e-19
Identities = 217/269 (80%), Gaps = 2/269 (0%)
Strand = Plus / Plus
Query: 220 tctggtgagcccccgagctacctgaccggtgagttccctggcgactacggttgggacact 279
|||||||||||||| ||||||||||||||| ||||| || |||||||| ||||||||
Sbjct: 198 tctggtgagcccccatcctacctgaccggtgaattccc-ggtgactacgggtgggacacc 256
Query: 280 gctgggttgtctgct-gaccccgagaccttcgccaagaaccgcgagctggaggtgatcca 338
|| || |||| || ||||| ||||| || ||||||||| | |||||||| || || ||
Sbjct: 257 gccggtctgtcagccagacccagagacttttgccaagaacagagagctggaagttattca 316
Query: 339 ctgccgttgggccatgcttggagcgctcggctgcgtcttccccgagttgctggcccgaaa 398
||| ||||| ||| | ||||| ||||| ||||| ||||| ||| | ||| ||||||
Sbjct: 317 tgcccggtgggcaatgttgggagctctcgggtgcgttttcccggagcttctgagccgaaa 376
Query: 399 cggcgtgaagttcggtgaggctgtttggttcaaggccggatcccagatcttcagcgaggg 458
|| ||||||||||| || || |||||||||||||| || || ||||||||||| |||||
Sbjct: 377 tggtgtgaagttcggggaagcggtttggttcaaggcgggctcacagatcttcagtgaggg 436
Query: 459 cggcctggactaccttggcaacccaagcc 487
||| ||||||| | |||||||| ||||
Sbjct: 437 cggtttggactatttgggcaaccctagcc 465
Score = 52.0 bits (26), Expect = 0.002
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaac 547
||||| ||||| || ||||| || |||||| | || |||||||| || ||||| ||||||
Sbjct: 708 atcgttaccggaaaaggtcccctggagaacttggccgaccatctggcagaccctgtcaac 767
Query: 548 aacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||| || ||||| | ||||| ||||| ||||||||
Sbjct: 768 aacaacgcctgggcttatgccactaactttgttcccgg 805
>emb| X61915.1 |PTCABP P.thunbergii cab gene
Length = 5419
Score = 103 bits (52), Expect = 7e-19
Identities = 181/224 (80%)
Strand = Plus / Plus
Query: 259 ggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaac 318
||||||||||| ||||||||||| || | || || || || ||||||||||| || |||
Sbjct: 2494 ggcgactacgggtgggacactgccggcctctcggcggatccagagaccttcgcaaaaaac 2553
Query: 319 cgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttc 378
| ||||||||||||||||||||| | ||||||||| | ||||| ||||||||| | |||
Sbjct: 2554 agagagctggaggtgatccactgcagatgggccatgttgggagccctcggctgccttttc 2613
Query: 379 cccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccgga 438
|| ||| || ||||| ||| || ||||| || || || ||||| ||||||||||||||
Sbjct: 2614 ccggagctgttggccaaaaatggggtgaaatttggggaagctgtgtggttcaaggccggg 2673
Query: 439 tcccagatcttcagcgagggcggcctggactaccttggcaaccc 482
| ||||| ||| ||||| ||||| |||||||| || |||||
Sbjct: 2674 gcgcagatattctcagagggaggccttgactacctggggaaccc 2717
>emb| BX819530.1 |CNS0A9V8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB87ZE01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 291
Score = 103 bits (52), Expect = 7e-19
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 482 caagccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgacccc 541
||||||||||||||||| ||||| || | ||||||||||| |||||| | ||||||||
Sbjct: 59 caagccatcgtcaccggaaagggacctttggagaacctcgccgaccatttggccgaccca 118
Query: 542 gtcaacaacaatgcatgggcattcgccaccaacttcgttcccgg 585
||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 119 gtcaacaacaacgcttgggccttcgccaccaacttcgtccccgg 162
>dbj| AK058312.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full
insert sequence
Length = 1040
Score = 103 bits (52), Expect = 7e-19
Identities = 93/104 (89%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgct-gaccatctcgccgaccccgt 543
|||||||||||||||||||| || | |||||||| ||| ||||| ||||||||||||||
Sbjct: 757 gccatcgtcaccggcaagggccccttggagaacct-gctcgaccacctcgccgaccccgt 815
Query: 544 caacaacaatgcatgggcattcgccaccaacttcgttcccggca 587
||||||||| |||||||| | ||||||||||||||| |||||||
Sbjct: 816 caacaacaacgcatgggcctacgccaccaacttcgtccccggca 859
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 424 tggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggcaaccc 482
|||||||||||||| ||||||||||| ||| |||||||| |||||||| ||||||||
Sbjct: 451 tggttcaaggccggcgcccagatcttctccgacggcggcctcgactacctcggcaaccc 509
Score = 61.9 bits (31), Expect = 2e-06
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 250 gagttccctggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttc 309
|||||||| |||||||| || |||||||| || ||| | || || ||||| ||| | |||
Sbjct: 274 gagttcccgggcgactatgggtgggacacggcggggctctccgcggacccggaggcgttc 333
Query: 310 gccaagaaccgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggc 369
|| | |||| | | |||||||||||||||| |||| ||||| ||||| || ||||| |||
Sbjct: 334 gcgaggaacagggcgctggaggtgatccacggccggtgggcgatgctcggcgcgctgggc 393
Query: 370 tgc 372
|||
Sbjct: 394 tgc 396
>gb| DQ018376.1 | Pinus krempfii chloroplast putative light harvesting chlorophyll
a/b binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 752
Score = 101 bits (51), Expect = 3e-18
Identities = 201/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 218 ctacttgaccggtgagttcccaggtgactacgggtgggacacggcggggctttcggcgga 277
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || | |||| | || ||||| ||||||||| |||| ||||| |||||
Sbjct: 278 tccggagacttttgcgaggaacagagaactggaagtgatccacagccggtgggcaatgct 337
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||| ||
Sbjct: 338 gggcgccctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcggaga 397
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 398 ggcagtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 457
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 458 aaaccctagcc 468
Score = 58.0 bits (29), Expect = 4e-05
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctga 525
|||||||||||||||||||| || ||||||||||||||||
Sbjct: 708 gccatcgtcaccggcaagggacccatcgagaacctcgctga 748
>gb| DQ018375.1 | Pinus gerardiana chloroplast putative light harvesting chlorophyll
a/b binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 760
Score = 101 bits (51), Expect = 3e-18
Identities = 201/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| ||||| || || || | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggatacggcgggcctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| |||||||||||||| ||||| |||||
Sbjct: 281 tccggagacatttgcgaagaacagagaactggaagtgatccactgccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| |||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggcgagaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 401 ggcagtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 44.1 bits (22), Expect = 0.54
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgc 534
||||| |||||||| ||||| || |||||||||||||||| || |||||
Sbjct: 711 gccattgtcaccggaaagggacccatcgagaacctcgctgatcacctcgc 760
>gb| AY617091.1 | Pinus strobus chloroplast light harvesting chlorophyll a/b binding
protein (ifg1934) gene, partial cds; nuclear gene for
chloroplast product
Length = 770
Score = 101 bits (51), Expect = 3e-18
Identities = 201/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| ||||||||| |||| ||||| |||||
Sbjct: 281 tccggagacatttgcgaagaacagagaactggaagtgatccacagccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| ||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggcgaaaaatggagtaaagttcggmga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct: 401 ggcagtgtggttcaaggcgggagctcagattttcagcgagggagggcttgactacctggg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 485 gccatcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
|||||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 711 gccatcgtcaccggaaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>gb| AY617087.1 | Pinus chiapensis chloroplast light harvesting chlorophyll a/b
binding protein (ifg1934) gene, partial cds; nuclear
gene for chloroplast product
Length = 770
Score = 101 bits (51), Expect = 3e-18
Identities = 201/251 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||||||||||||||| || |||||||| |||||||| || ||| | || || ||
Sbjct: 221 ctacttgaccggtgagttcccgggtgactacgggtgggacacggcggggctttcggcgga 280
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
|| ||||| || || |||||| | || ||||| ||||||||| |||| ||||| |||||
Sbjct: 281 tccggagacatttgcgaagaacagagaactggaagtgatccacagccggtgggcaatgct 340
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || || || ||||| ||||| ||| | ||||| ||| || || |||||||| ||
Sbjct: 341 gggcgctctgggttgcgttttcccggagcttctggcgaaaaatggagtaaagttcgggga 400
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||| || ||||||||||| ||| | ||||| ||||||||||| || || ||| |||||||
Sbjct: 401 ggcagtgtggttcaaggcgggagctcagattttcagcgagggagggcttgaccaccttgg 460
Query: 477 caacccaagcc 487
||||| ||||
Sbjct: 461 aaaccctagcc 471
Score = 63.9 bits (32), Expect = 6e-07
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 488 atcgtcaccggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgt 543
||||||||||| ||||| || |||||||||||||||| || ||||||||||||||
Sbjct: 714 atcgtcaccggaaagggacccatcgagaacctcgctgatcacctcgccgaccccgt 769
>emb| X13407.1 |PTCAB Pinus thunbergii cab mRNA for light-harvesting chlorophyll a/b
binding protein
Length = 978
Score = 101 bits (51), Expect = 3e-18
Identities = 147/179 (82%)
Strand = Plus / Plus
Query: 259 ggcgactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaac 318
||||||||||| ||||||||||| | | || || || || ||||||||||| || |||
Sbjct: 275 ggcgactacgggtgggacactgccgccgtctcggcggatccagagaccttcgcaaaaaac 334
Query: 319 cgcgagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttc 378
| ||||||||||||||||||||| | ||||||||| | ||||||||||||||||| |||
Sbjct: 335 agagagctggaggtgatccactgcagatgggccatgttgggagcgctcggctgcgttttc 394
Query: 379 cccgagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccgg 437
|| ||| || ||||| ||| || |||| || || || ||||| ||||||||||||||
Sbjct: 395 ccggagctgttggccaaaaatgggttgaaatttggggaagctgtgtggttcaaggccgg 453
>dbj| AB050125.1 | Amaranthus tricolor cab1b mRNA for type I chlorophyll a/b-binding
protein b, partial cds
Length = 461
Score = 101 bits (51), Expect = 3e-18
Identities = 156/191 (81%)
Strand = Plus / Plus
Query: 262 gactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaaccgc 321
|||||||| ||||||||||||||| | || |||||||| || ||||| || ||||||||
Sbjct: 1 gactacgggtgggacactgctgggctttcagctgacccggaaacctttgctaagaaccgt 60
Query: 322 gagctggaggtgatccactgccgttgggccatgcttggagcgctcggctgcgtcttcccc 381
||||| ||||| || |||||||| ||||||||| | || || | ||||| || || |||
Sbjct: 61 gagcttgaggtcattcactgccgatgggccatgttgggtgctttgggctgtgtttttccc 120
Query: 382 gagttgctggcccgaaacggcgtgaagttcggtgaggctgtttggttcaaggccggatcc 441
||| | ||||||| || || || ||||| ||||| ||||||||||||||||| || ||
Sbjct: 121 gagctcttggcccgtaatggtgttaagtttggtgaagctgtttggttcaaggcgggctca 180
Query: 442 cagatcttcag 452
|| ||||||||
Sbjct: 181 caaatcttcag 191
>gb| AF417304.1 | Castanea sativa putative chlorophyll-A-B-binding protein mRNA,
partial cds
Length = 446
Score = 99.6 bits (50), Expect = 1e-17
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 262 gactacggttgggacactgctgggttgtctgctgaccccgagaccttcgccaagaaccgc 321
||||| || |||||||||||||| || || || ||||| ||||| || || ||||||||
Sbjct: 312 gactatggctgggacactgctggattatccgcagaccctgagacatttgctaagaaccgt 371
Query: 322 gagctggaggtgatccactgccgttgggccatgcttggagcg 363
|||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 372 gagctggaggtgatccacagccgatgggccatgcttggagcg 413
>gb| AF279250.1 |AF279250 Vigna radiata LHCII type I chlorophyll a/b-binding protein
(CipLhcb1*3) mRNA, complete cds; nuclear gene for
chloroplast product
Length = 941
Score = 99.6 bits (50), Expect = 1e-17
Identities = 200/250 (80%)
Strand = Plus / Plus
Query: 238 tacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctgac 297
||||| || ||||| ||||| || ||||| |||||||||||||| ||| | |||||||||
Sbjct: 254 tacctcactggtgaattcccaggtgactatggttgggacactgccgggctttctgctgac 313
Query: 298 cccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgctt 357
|| ||||| || || | ||||| || || || || ||||||| | | ||||||||| |
Sbjct: 314 cctgagacttttgctagaaaccgtgaacttgaagttatccactccagatgggccatgttg 373
Query: 358 ggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtgag 417
||||| | ||| | || |||||||| | ||||||| ||||| ||||||||||| |||
Sbjct: 374 ggagccttgggcagtgttttccccgaactcttggcccgtaacggtgtgaagttcggcgag 433
Query: 418 gctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttggc 477
||||| ||||| ||||| ||||| ||||| ||||| ||||| || || |||||| | |||
Sbjct: 434 gctgtgtggtttaaggctggatctcagatattcagtgagggtggacttgactacttgggc 493
Query: 478 aacccaagcc 487
|| |||||||
Sbjct: 494 aatccaagcc 503
Score = 48.1 bits (24), Expect = 0.035
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 494 accggcaagggtccactcgagaacctcgctgaccatctcgccgaccccgtcaacaacaat 553
||||| ||||| || || || ||||| || ||||| || || ||||| ||||||||||||
Sbjct: 752 accggaaagggaccgctggaaaaccttgcagaccaccttgctgaccctgtcaacaacaat 811
Query: 554 gcatgggcattcgccaccaacttcgttcccgg 585
|| ||||||| ||||| ||||| || |||||
Sbjct: 812 gcttgggcatatgccacaaactttgtccccgg 843
>emb| X56538.1 |PSCABIIC P.sativum Cab-8 gene for photosystemm II chlorophyll a/b binding
protein
Length = 2236
Score = 99.6 bits (50), Expect = 1e-17
Identities = 200/250 (80%)
Strand = Plus / Plus
Query: 237 ctacctgaccggtgagttccctggcgactacggttgggacactgctgggttgtctgctga 296
|||| |||| || |||||||| || |||||||||||||||||||| || | ||||||||
Sbjct: 1520 ctacttgactggagagttccccggtgactacggttgggacactgccggactctctgctga 1579
Query: 297 ccccgagaccttcgccaagaaccgcgagctggaggtgatccactgccgttgggccatgct 356
||| ||||| ||| |||||||||| ||||| || || ||||||| | | ||||| ||| |
Sbjct: 1580 cccagagacattctccaagaaccgtgagcttgaagtcatccactccagatgggctatgtt 1639
Query: 357 tggagcgctcggctgcgtcttccccgagttgctggcccgaaacggcgtgaagttcggtga 416
|| || | || || |||||||| ||| | || | || ||||| || || ||||||||
Sbjct: 1640 gggtgctttgggatgtgtcttcccagagcttttgtctcgcaacggtgttaaattcggtga 1699
Query: 417 ggctgtttggttcaaggccggatcccagatcttcagcgagggcggcctggactaccttgg 476
||||| ||||||||||| ||||| || ||||| |||||||| || || |||||| | ||
Sbjct: 1700 agctgtgtggttcaaggcaggatctcaaatctttagcgagggtggacttgactacttggg 1759
Query: 477 caacccaagc 486
|||||||||
Sbjct: 1760 taacccaagc 1769
Score = 60.0 bits (30), Expect = 9e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 512 gagaacctcgctgaccatctcgccgaccccgtcaacaacaatgcatgggcattcgccacc 571
||||| || ||||| ||||| ||||||| || ||||||||||||||| ||| ||||||
Sbjct: 2037 gagaatcttgctgatcatctttccgacccagttaacaacaatgcatggtcatatgccacc 2096
Query: 572 aacttcgttcccgg 585
||||| ||||||||
Sbjct: 2097 aactttgttcccgg 2110
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,011,801
Number of Sequences: 3902068
Number of extensions: 4011801
Number of successful extensions: 82506
Number of sequences better than 10.0: 426
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 80585
Number of HSP's gapped (non-prelim): 1765
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)