ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3d12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1235 bits (623), Expect = 0.0 Identities = 640/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119968 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 119909 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119908 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119849 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119848 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119789 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119788 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119729 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119728 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 119669 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119668 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119609 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119608 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119549 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119548 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 119489 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119488 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 119430 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 119429 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa-cctg 119371 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119370 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 119328 Score = 1235 bits (623), Expect = 0.0 Identities = 640/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94926 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 94985 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94986 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95045 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95046 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95105 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95106 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95165 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95166 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 95225 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95226 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95285 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95286 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95345 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95346 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 95405 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95406 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 95464 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95465 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa-cctg 95523 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95524 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 95566
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118749 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 118690 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118689 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 118630 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118629 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 118570 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118569 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 118510 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118509 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 118450 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118449 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 118390 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118389 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 118330 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118329 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 118270 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 118269 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 118211 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 118210 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 118152 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118151 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 118109
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119833 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 119774 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119773 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119714 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119713 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119654 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119653 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119594 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119593 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 119534 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119533 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119474 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119473 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119414 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119413 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 119354 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119353 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 119295 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 119294 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 119236 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95323 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 95382 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95442 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95502 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95503 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95562 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95563 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 95622 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95682 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95742 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95743 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 95802 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95803 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 95861 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 95862 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 95920 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119833 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 119774 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119773 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119714 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119713 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119654 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119653 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119594 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119593 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 119534 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119533 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119474 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119473 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119414 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119413 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 119354 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119353 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 119295 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 119294 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 119236 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95323 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 95382 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95442 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95502 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95503 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95562 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95563 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 95622 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95682 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95742 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95743 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 95802 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95803 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 95861 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 95862 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 95920 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119782 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 119723 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119722 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119663 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119662 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119603 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119602 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119543 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119542 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 119483 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119423 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119363 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119362 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 119303 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119302 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 119244 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 119243 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 119185 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119184 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 119142 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95268 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 95327 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95328 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95387 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95447 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95507 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95508 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 95567 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95568 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95627 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95687 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 95747 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95748 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 95806 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 95807 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 95865 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95866 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 95908
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31507901 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 31507960 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507961 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 31508020 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508021 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 31508080 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508081 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 31508140 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31508141 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 31508200 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508201 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 31508260 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508261 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 31508320 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508321 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 31508380 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 31508381 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 31508439 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 31508440 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 31508498 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508499 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 31508541
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 84695 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 84636 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84635 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 84576 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84575 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 84516 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84515 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 84456 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 84455 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 84396 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84395 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 84336 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84335 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 84276 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84275 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 84216 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 84215 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 84157 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 84156 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 84098 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84097 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 84055
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119802 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 119743 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119742 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119683 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119682 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119623 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119622 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119563 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119562 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 119503 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119502 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119443 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119442 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119383 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119382 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 119323 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119322 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 119264 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 119263 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 119205 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119204 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 119162 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95316 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 95375 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95376 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95435 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95436 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95495 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95496 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95555 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95556 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 95615 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95616 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95675 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95676 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95735 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95736 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 95795 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95796 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 95854 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 95855 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 95913 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 95956
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 58521 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 58462 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58461 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 58402 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58401 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 58342 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58341 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 58282 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 58281 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 58222 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58221 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 58162 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58161 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 58102 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58101 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 58042 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 58041 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 57983 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 57982 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 57924 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57923 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 57881
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9268250 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 9268309 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268310 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9268369 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268370 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9268429 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268430 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9268489 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9268490 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 9268549 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268550 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9268609 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268610 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9268669 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268670 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 9268729 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9268730 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 9268788 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 9268789 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 9268847 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268848 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 9268890 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9227750 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 9227809 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227810 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9227869 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227870 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9227929 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227930 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9227989 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9227990 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 9228049 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228050 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9228109 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228110 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9228169 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228170 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 9228229 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9228230 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 9228288 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 9228289 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-ccta 9228347 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228348 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 9228390 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9056164 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 9056223 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056224 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9056283 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056284 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9056343 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056344 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9056403 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9056404 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 9056463 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056464 atcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9056523 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056524 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9056583 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056584 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 9056643 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9056644 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 9056702 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 9056703 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 9056761 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056762 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 9056804 Score = 1205 bits (608), Expect = 0.0 Identities = 636/643 (98%), Gaps = 3/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9164339 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 9164398 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164399 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9164458 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164459 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9164518 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164519 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9164578 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9164579 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 9164638 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164639 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9164698 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164699 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9164758 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164759 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 9164818 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9164819 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 9164877 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 9164878 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa--cta 9164935 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164936 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 9164978 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 350 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 409 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 410 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19938235 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 19938294 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938295 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 19938354 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938355 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 19938414 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938415 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 19938474 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19938475 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 19938534 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938535 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 19938594 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938595 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 19938654 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938655 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 19938714 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19938715 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 19938773 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 19938774 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 19938832 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938833 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 19938875 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10277196 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 10277137 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277136 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10277077 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277076 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10277017 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277016 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10276957 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10276956 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 10276897 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276896 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10276837 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276836 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 10276777 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276776 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 10276717 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10276716 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 10276658 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 10276657 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 10276599 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276598 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 10276556 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10387102 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 10387161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10387221 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10387281 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387282 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10387341 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10387342 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 10387401 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387402 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10387461 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10387462 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 10387521 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387522 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 10387581 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10387582 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 10387640 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 10387641 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 10387699 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387700 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 10387742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 368 agtaccgtgagggaaaggtgaaaagaacccc 398 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 193 ttgtgctgctaggcgaagcggttgagtgc 221 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31598417 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 31598476 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598477 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 31598536 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598537 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 31598596 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598597 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 31598656 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31598657 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 31598716 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598717 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 31598776 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598777 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 31598836 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598837 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 31598896 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 31598897 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 31598955 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 31598956 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 31599014 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599015 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 31599057
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 33525733 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 33525792 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525793 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 33525852 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525853 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 33525912 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525913 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 33525972 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 33525973 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 33526032 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526033 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 33526092 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526093 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 33526152 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526153 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 33526212 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 33526213 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 33526271 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 33526272 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 33526330 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526331 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 33526373 Score = 319 bits (161), Expect = 6e-84 Identities = 167/169 (98%) Strand = Plus / Minus Query: 372 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 431 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 432 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 491 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 492 gccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 16677933 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 386 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 445 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 446 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 495 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 379 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 417 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47808 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 47749 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47748 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 47689 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47688 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 47629 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47628 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 47569 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47568 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 47509 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47508 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 47449 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47448 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 47389 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47388 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 47329 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 47328 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 47270 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 47269 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 47211 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47210 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 47168
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 70930 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 70989 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70990 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 71049 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71050 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 71109 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71110 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 71169 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 71170 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 71229 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71230 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 71289 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71290 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 71349 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71350 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 71409 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 71410 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 71468 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 71469 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 71527 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71528 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 71570 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 102 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 341 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 342 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 401 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 461 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 521 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 581 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 582 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 640 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 641 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 699 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 742
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 68 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 128 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 188 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 248 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 249 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 308 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 368 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 428 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 488 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 489 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 547 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 548 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 606 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 649
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19949511 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 19949570 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949571 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 19949630 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949631 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 19949690 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949691 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 19949750 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19949751 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 19949810 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949811 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 19949870 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949871 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 19949930 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949931 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 19949990 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19949991 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 19950049 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 19950050 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 19950108 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950109 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 19950151 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10283235 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 10283176 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283175 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10283116 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283115 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10283056 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283055 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10282996 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10282995 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 10282936 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282935 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10282876 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282875 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 10282816 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282815 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 10282756 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10282755 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 10282697 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 10282696 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 10282638 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282637 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 10282595 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10393141 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 10393200 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393201 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 10393260 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393261 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 10393320 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393321 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 10393380 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10393381 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 10393440 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393441 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 10393500 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10393501 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 10393560 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393561 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 10393620 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10393621 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 10393679 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 10393680 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 10393738 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393739 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 10393781 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 193 ttgtgctgctaggcgaagcggttgagtgc 221 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119776 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 119717 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119716 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 119657 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119656 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 119597 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119596 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 119537 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119536 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 119477 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119476 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 119417 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119416 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 119357 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119356 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 119297 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119296 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 119238 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 119237 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 119179 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119178 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 119136 Score = 1219 bits (615), Expect = 0.0 Identities = 638/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95263 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 95322 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95323 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 95382 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 95442 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 95502 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95503 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 95562 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95563 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 95622 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 95682 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 95742 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95743 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 95801 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 95802 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 95860 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95861 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 95903
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 879 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 820 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 760 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 700 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 640 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 639 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 580 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 520 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 460 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 400 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 399 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 341 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 340 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 282 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 239
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14090 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 14149 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14150 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 14209 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14210 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 14269 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14270 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 14329 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14330 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 14389 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14390 atcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 14449 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14450 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 14509 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14510 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 14569 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 14570 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 14628 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 14629 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 14687 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14688 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 14730 Score = 1205 bits (608), Expect = 0.0 Identities = 636/643 (98%), Gaps = 3/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122365 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 122424 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122425 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 122484 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122485 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 122544 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122545 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 122604 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122605 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 122664 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122665 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 122724 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122725 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 122784 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122785 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 122844 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 122845 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 122903 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 122904 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa--cta 122961 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122962 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 123004
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 140898 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 140957 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140958 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 141017 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141018 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 141077 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141078 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 141137 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141138 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 141197 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141198 atcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 141257 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141258 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 141317 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141318 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 141377 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141378 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 141436 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 141437 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 141495 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141496 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 141538
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 93494 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 93553 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93554 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 93613 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93614 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 93673 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93674 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 93733 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 93734 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 93793 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93794 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 93853 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 93854 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 93913 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93914 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 93973 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 93974 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 94032 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 94033 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 94091 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94092 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 94134
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 20325 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 20384 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20385 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 20444 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20445 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 20504 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20505 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 20564 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 20565 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 20624 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20625 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 20684 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20685 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 20744 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20745 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 20804 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 20805 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 20863 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 20864 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 20922 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20923 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 20965 Score = 1195 bits (603), Expect = 0.0 Identities = 635/643 (98%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 44793 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 44734 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44733 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 44674 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44673 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 44614 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44613 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 44554 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 44553 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 44494 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44493 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 44434 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44433 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 44374 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44373 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 44314 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || Sbjct: 44313 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccctcc-gg 44255 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 44254 agccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 44196 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44195 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 44153
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1422 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 1363 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1362 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 1303 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1302 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 1243 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1242 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 1183 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1182 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 1123 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1122 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 1063 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1062 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 1003 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 943 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 942 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 884 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 883 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 825 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 782
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27558 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 27617 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27618 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 27677 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27678 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 27737 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27738 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 27797 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27798 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 27857 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27858 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 27917 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27918 cgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgt 27977 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27978 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 28037 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 28038 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 28096 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 28097 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 28155 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28156 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 28198
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123632 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 123573 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123572 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 123513 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123512 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 123453 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123452 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 123393 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123392 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 123333 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123332 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 123273 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123272 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 123213 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123212 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 123153 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 123152 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 123094 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 123093 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 123035 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123034 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 122992 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 99205 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 99264 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99265 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 99324 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99325 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 99384 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99385 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 99444 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 99445 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 99504 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99505 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 99564 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99565 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 99624 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99625 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 99684 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 99685 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 99743 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 99744 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 99802 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99803 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 99845
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 124349 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 124290 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124289 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 124230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124229 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 124170 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124169 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 124110 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 124109 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 124050 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124049 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 123990 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123989 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 123930 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123929 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 123870 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 123869 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 123811 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 123810 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 123752 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123751 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 123709 Score = 1211 bits (611), Expect = 0.0 Identities = 637/643 (99%), Gaps = 2/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 99882 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 99941 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99942 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 100001 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100002 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 100061 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100062 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 100121 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 100122 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 100181 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100182 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 100241 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100242 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 100301 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100302 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 100361 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 100362 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 100420 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 100421 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 100479 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100480 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 100522
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1203 bits (607), Expect = 0.0 Identities = 636/643 (98%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9242031 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 9241972 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241971 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 9241912 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241911 cgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 9241852 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241851 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 9241792 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9241791 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 9241732 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241731 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 9241672 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241671 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 9241612 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241611 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 9241552 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9241551 tgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 9241493 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 9241492 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 9241434 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241433 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 9241391 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 75 actgaaacatcttagtagccagaggaaaagaaag 108 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1203 bits (607), Expect = 0.0 Identities = 636/643 (98%), Gaps = 2/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 53244 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 53185 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53184 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 53125 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53124 cgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 53065 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53064 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 53005 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 53004 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 52945 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52944 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 52885 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52884 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 52825 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52824 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 52765 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 52764 tgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 52706 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 52705 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 52647 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52646 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 52604
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1178 bits (594), Expect = 0.0 Identities = 620/626 (99%), Gaps = 2/626 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 64 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 124 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 184 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 244 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 245 tccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacgtgga 304 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 364 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 424 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 484 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 485 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-gg 543 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 544 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 602 Query: 602 ggtgatctatccatgaccaggatgaa 627 |||||||||||||||||||||||||| Sbjct: 603 ggtgatctatccatgaccaggatgaa 628
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1164 bits (587), Expect = 0.0 Identities = 632/643 (98%), Gaps = 3/643 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 123571 cggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaaga 123512 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123511 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 123452 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123451 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 123392 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 123391 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 123332 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 123331 tccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgga 123273 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123272 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 123213 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123212 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 123153 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123152 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 123093 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 123092 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 123034 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 123033 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 122975 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122974 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 122932 Score = 1164 bits (587), Expect = 0.0 Identities = 632/643 (98%), Gaps = 3/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 99166 cggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaaga 99225 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99226 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 99285 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99286 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 99345 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 99346 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 99405 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 99406 tccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgga 99464 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99465 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 99524 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99525 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 99584 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99585 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 99644 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 99645 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 99703 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 99704 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 99762 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99763 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 99805
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1164 bits (587), Expect = 0.0 Identities = 632/643 (98%), Gaps = 3/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 5519 cggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaaga 5578 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5579 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 5638 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5639 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 5698 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5699 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 5758 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 5759 tccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgga 5817 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5818 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 5877 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5878 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 5937 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5938 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 5997 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 5998 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 6056 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 6057 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 6115 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6116 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 6158
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1164 bits (587), Expect = 0.0 Identities = 632/643 (98%), Gaps = 3/643 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 107 cggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaaga 166 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 226 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 227 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgag 286 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 287 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatag 346 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 347 tccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtgga 405 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 465 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 525 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 585 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 586 tgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccacc-gg 644 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 645 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 703 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 746
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 99 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 158 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 218 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 278 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 338 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 339 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 398 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 458 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 518 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 578 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 529 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 626
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1025 bits (517), Expect = 0.0 Identities = 537/541 (99%), Gaps = 2/541 (0%) Strand = Plus / Plus Query: 104 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 164 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 224 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 283 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 284 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 344 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 404 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 421 ggaacggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 479 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 538 Query: 644 g 644 | Sbjct: 539 g 539
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1021 bits (515), Expect = 0.0 Identities = 535/539 (99%), Gaps = 2/539 (0%) Strand = Plus / Plus Query: 106 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 166 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 226 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 285 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 286 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 346 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 406 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 526 aacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 585 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 aacggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 586 atggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1021 bits (515), Expect = 0.0 Identities = 535/539 (99%), Gaps = 2/539 (0%) Strand = Plus / Plus Query: 106 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 166 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 226 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 285 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 286 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 346 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 406 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 526 aacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 585 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 aacggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 586 atggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1019 bits (514), Expect = 0.0 Identities = 534/538 (99%), Gaps = 2/538 (0%) Strand = Plus / Plus Query: 107 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 167 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 227 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 286 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 287 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 347 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 407 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 527 acggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 586 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 424 acggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 482 Query: 587 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 tggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 539
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1015 bits (512), Expect = 0.0 Identities = 532/536 (99%), Gaps = 2/536 (0%) Strand = Plus / Plus Query: 109 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 169 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 229 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 288 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 289 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 349 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 409 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 469 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 529 ggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 588 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 421 ggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 479 Query: 589 gacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 gacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 534
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1013 bits (511), Expect = 0.0 Identities = 523/527 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 59 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 118 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 178 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 238 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 cagtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 298 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 299 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 358 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 418 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 478 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 479 gaaaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgt 538 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac 528 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tgaagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1011 bits (510), Expect = 0.0 Identities = 530/534 (99%), Gaps = 2/534 (0%) Strand = Plus / Plus Query: 107 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 167 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 227 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 286 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 287 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 347 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 407 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 527 acggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 586 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 acggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 479 Query: 587 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 640 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 tggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaac 532
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 993 bits (501), Expect = 0.0 Identities = 611/643 (95%), Gaps = 11/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 134119 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 134061 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134060 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 134001 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134000 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 133941 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| | || Sbjct: 133940 caatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagag 133881 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133880 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 133821 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133820 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 133761 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 133760 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 133701 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 133700 gaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgt 133644 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 133643 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 133590 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 133589 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 133531 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133530 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 133488 Score = 993 bits (501), Expect = 0.0 Identities = 611/643 (95%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 103852 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 103910 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103911 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 103970 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103971 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104030 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| | || Sbjct: 104031 caatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagag 104090 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104091 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 104150 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104151 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 104210 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 104211 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 104270 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 104271 gaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgt 104327 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 104328 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 104381 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 104382 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 104440 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104441 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104483
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 977 bits (493), Expect = 0.0 Identities = 609/643 (94%), Gaps = 11/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 139482 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 139424 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139423 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 139364 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139363 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 139304 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||| | |||||||||||||| | || Sbjct: 139303 caatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagag 139244 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 139243 tccagtagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgga 139184 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139183 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 139124 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 139123 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 139064 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 139063 gaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgt 139007 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 139006 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 138953 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 138952 agccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 138894 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138893 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138851 Score = 977 bits (493), Expect = 0.0 Identities = 609/643 (94%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 110463 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 110521 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110522 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 110581 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110582 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 110641 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||| | |||||||||||||| | || Sbjct: 110642 caatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagag 110701 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 110702 tccagtagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgga 110761 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110762 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 110821 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 110822 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 110881 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 110882 gaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgt 110938 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 110939 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 110992 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 110993 agccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 111051 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111052 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 111094
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 977 bits (493), Expect = 0.0 Identities = 609/643 (94%), Gaps = 11/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 127760 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 127702 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127701 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 127642 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127641 catagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 127582 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 127581 caatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 127522 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 127521 tccagtagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtgga 127462 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127461 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 127402 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 127401 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 127342 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 127341 gaaaccg---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgt 127285 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 127284 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaatccacc-gt 127231 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 127230 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 127172 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127171 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 127129 Score = 977 bits (493), Expect = 0.0 Identities = 609/643 (94%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 107162 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 107220 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107221 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 107280 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107281 catagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 107340 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 107341 caatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 107400 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107401 tccagtagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtgga 107460 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107461 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 107520 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 107521 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 107580 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 107581 gaaaccg---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgt 107637 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 107638 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaatccacc-gt 107691 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 107692 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctg 107750 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107751 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107793
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 969 bits (489), Expect = 0.0 Identities = 608/643 (94%), Gaps = 11/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 142004 cggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 141946 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141945 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 141886 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141885 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 141826 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 141825 caatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagag 141766 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 141765 tccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgga 141706 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141705 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 141646 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 141645 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 141586 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 141585 gaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgt 141529 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 141528 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 141475 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 141474 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 141416 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141415 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 141373 Score = 969 bits (489), Expect = 0.0 Identities = 608/643 (94%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 111653 cggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 111711 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111712 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 111771 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111772 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 111831 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 111832 caatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagag 111891 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 111892 tccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtgga 111951 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111952 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 112011 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 112012 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 112071 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 112072 gaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgt 112128 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 112129 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 112182 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 112183 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 112241 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112242 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 112284
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 967 bits (488), Expect = 0.0 Identities = 608/643 (94%), Gaps = 15/643 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 134877 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 134819 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134818 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 134759 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134758 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 134699 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||| || Sbjct: 134698 caatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagag 134639 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 134638 tccagtagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtgga 134579 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134578 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 134519 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 134518 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 134459 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 134458 gaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgt 134406 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 134405 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 134352 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 134351 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 134293 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134292 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134250 Score = 967 bits (488), Expect = 0.0 Identities = 608/643 (94%), Gaps = 15/643 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 105405 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 105463 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105464 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105523 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105524 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105583 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || |||||| |||||||||||||||| || Sbjct: 105584 caatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagag 105643 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 105644 tccagtagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtgga 105703 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105704 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 105763 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 105764 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 105823 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 105824 gaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgt 105876 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 105877 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 105930 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 105931 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 105989 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105990 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106032
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 31 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 91 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 151 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 211 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 271 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 331 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 391 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 451 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 511 tggcttggtt 520 |||||||||| Sbjct: 481 tggcttggtt 490
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 963 bits (486), Expect = 0.0 Identities = 608/643 (94%), Gaps = 13/643 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 136487 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 136429 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136428 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136369 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136368 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136309 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 136308 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 136249 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 136248 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 136189 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136188 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 136129 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 136128 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 136069 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | || | |||||||||||||||||| Sbjct: 136068 gaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgt 136014 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 136013 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 135960 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 135959 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 135901 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135900 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135858 Score = 963 bits (486), Expect = 0.0 Identities = 608/643 (94%), Gaps = 13/643 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 105938 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 105996 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105997 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106056 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106057 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106116 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 106117 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 106176 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106177 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 106236 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106237 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 106296 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 106297 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 106356 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | || | |||||||||||||||||| Sbjct: 106357 gaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgt 106411 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 106412 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 106465 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 106466 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 106524 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106525 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106567
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 946 bits (477), Expect = 0.0 Identities = 606/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 132671 cggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaaga 132613 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132612 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 132553 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132552 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 132493 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 132492 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 132433 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132432 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 132373 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132372 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 132313 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 132312 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 132253 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 132252 gaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgt 132197 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 132196 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 132143 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 132142 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 132084 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132083 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132041 Score = 946 bits (477), Expect = 0.0 Identities = 606/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 104207 cggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaaga 104265 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104266 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 104325 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104326 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104385 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 104386 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 104445 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104446 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 104505 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104506 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 104565 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 104566 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 104625 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 104626 gaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgt 104681 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 104682 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 104735 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 104736 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 104794 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104795 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104837
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 946 bits (477), Expect = 0.0 Identities = 606/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 132894 cggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 132836 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132835 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 132776 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132775 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 132716 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 132715 caataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 132656 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132655 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 132596 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132595 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 132536 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 132535 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 132476 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | || |||||||||||||||||| Sbjct: 132475 gaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgt 132420 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 132419 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 132366 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 132365 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 132307 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132306 ggtgatctatctatgaccaggatgaagcttgggtgaaactaag 132264 Score = 946 bits (477), Expect = 0.0 Identities = 606/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 103870 cggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 103928 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103929 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 103988 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103989 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104048 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 104049 caataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 104108 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104109 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 104168 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104169 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 104228 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 104229 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 104288 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | || |||||||||||||||||| Sbjct: 104289 gaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgt 104344 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 104345 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 104398 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 104399 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 104457 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104458 ggtgatctatctatgaccaggatgaagcttgggtgaaactaag 104500
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 946 bits (477), Expect = 0.0 Identities = 606/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 132664 cggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaaga 132606 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132605 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 132546 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132545 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 132486 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 132485 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 132426 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132425 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 132366 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132365 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 132306 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 132305 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 132246 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 132245 gaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgt 132190 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 132189 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 132136 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 132135 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 132077 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132076 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132034 Score = 946 bits (477), Expect = 0.0 Identities = 606/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 104205 cggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaaga 104263 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104264 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 104323 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104324 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104383 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 104384 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 104443 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104444 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 104503 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104504 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 104563 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 104564 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 104623 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 104624 gaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgt 104679 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 104680 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 104733 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 104734 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 104792 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104793 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104835
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 938 bits (473), Expect = 0.0 Identities = 605/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 131563 cggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaaga 131505 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131504 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 131445 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131444 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 131385 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 131384 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 131325 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131324 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 131265 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131264 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 131205 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 131204 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 131145 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 131144 gaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgt 131089 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 131088 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 131035 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 131034 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 130976 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130975 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 130933 Score = 938 bits (473), Expect = 0.0 Identities = 605/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 103072 cggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaaga 103130 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103131 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 103190 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103191 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 103250 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 103251 caatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaag 103310 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103311 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 103370 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103371 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 103430 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 103431 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 103490 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 103491 gaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgt 103546 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 103547 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 103600 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 103601 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 103659 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103660 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 103702
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 938 bits (473), Expect = 0.0 Identities = 605/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 133855 cggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 133797 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133796 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 133737 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133736 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 133677 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 133676 caaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 133617 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133616 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 133557 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133556 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 133497 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 133496 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 133437 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | || |||||||||||||||||| Sbjct: 133436 gaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgt 133381 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 133380 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 133327 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 133326 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 133268 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133267 ggtgatctatctatgaccaggatgaagcttgggtgaaactaag 133225 Score = 938 bits (473), Expect = 0.0 Identities = 605/643 (94%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 104794 cggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 104852 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104853 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 104912 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104913 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 104972 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 104973 caaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 105032 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105033 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 105092 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105093 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 105152 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 105153 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 105212 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | || |||||||||||||||||| Sbjct: 105213 gaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgt 105268 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 105269 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 105322 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 105323 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 105381 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105382 ggtgatctatctatgaccaggatgaagcttgggtgaaactaag 105424
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 930 bits (469), Expect = 0.0 Identities = 604/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 140256 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 140198 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140197 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 140138 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140137 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 140078 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||||| || ||| |||||||||||||| | || Sbjct: 140077 caatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagag 140018 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 140017 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 139958 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139957 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 139898 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 139897 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 139838 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | || ||||||||||||||||| | | | | |||||||||||||||||| Sbjct: 139837 gaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgt 139782 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 139781 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 139728 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 139727 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 139669 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139668 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 139626 Score = 930 bits (469), Expect = 0.0 Identities = 604/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 109804 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 109862 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109863 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 109922 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109923 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 109982 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||||| || ||| |||||||||||||| | || Sbjct: 109983 caatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagag 110042 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110043 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 110102 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110103 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 110162 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 110163 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 110222 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | || ||||||||||||||||| | | | | |||||||||||||||||| Sbjct: 110223 gaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgt 110278 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 110279 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 110332 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 110333 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 110391 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110392 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110434
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 930 bits (469), Expect = 0.0 Identities = 604/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 103 cggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||| | |||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 282 caaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 341 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 tccagtagccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 401 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 461 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 462 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 521 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | || |||||||||||||||||| Sbjct: 522 gaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgt 577 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 578 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 631 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 632 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 690 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 691 ggtgatctatctatgaccaggatgaagcttgggtgaaactaag 733
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 136196 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 136138 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136137 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136078 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136077 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136018 Query: 182 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 136017 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 135958 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135957 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 135898 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135897 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135838 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135837 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135778 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 135777 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 135723 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 135722 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 135669 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 135668 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 135610 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135609 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135566 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 106434 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 106492 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106493 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106552 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106553 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106612 Query: 182 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 106613 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 106672 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106673 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 106732 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106733 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 106792 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106793 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106852 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106853 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106907 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 106908 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 106961 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 106962 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 107020 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107021 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107064
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 136834 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 136776 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136775 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136716 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136715 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136656 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 136655 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 136596 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 136595 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 136536 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136535 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 136476 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 136475 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 136416 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 136415 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 136361 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 136360 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 136307 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 136306 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 136248 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136247 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 136204 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 106723 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 106781 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106782 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106841 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106842 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106901 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 106902 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 106961 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106962 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 107021 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107022 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 107081 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 107082 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 107141 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 107142 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 107196 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 107197 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 107250 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 107251 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 107309 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107310 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107353
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 1628 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 1686 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 1746 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 1806 Query: 182 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 1807 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 1866 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1867 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 1926 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1927 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 1986 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 1987 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 2046 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 2047 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 2101 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 2102 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 2155 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 2156 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 2214 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2215 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2258
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 135442 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 135384 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135383 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135324 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135323 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135264 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135263 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135204 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135203 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 135144 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135143 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135084 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135083 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135024 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 135023 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 134969 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 134968 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 134915 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 134914 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 134856 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134855 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134812 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 105594 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 105652 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105653 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105712 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105713 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105772 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105773 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 105832 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 105833 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 105892 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105893 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 105952 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 105953 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106012 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106013 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106067 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 106068 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 106121 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 106122 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 106180 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106181 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106224
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 135577 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 135519 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135518 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135459 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135458 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135399 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135398 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135339 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135338 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 135279 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135278 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135219 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135218 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135159 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 135158 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 135104 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 135103 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 135050 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 135049 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 134991 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134990 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134947 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 105766 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 105824 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105825 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105884 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105885 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105944 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105945 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 106004 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106005 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 106064 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106065 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 106124 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106125 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106184 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106185 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106239 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 106240 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 106293 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 106294 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 106352 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106353 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106396
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 135575 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 135517 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135516 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135457 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135456 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135397 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135396 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135337 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135336 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 135277 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135276 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135217 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135216 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135157 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 135156 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 135102 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 135101 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 135048 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 135047 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 134989 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134988 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134945 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 105763 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 105821 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105822 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105881 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105882 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105941 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105942 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 106001 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106002 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 106061 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106062 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 106121 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106122 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106181 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106182 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106236 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 106237 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 106290 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 106291 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 106349 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106350 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106393
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 135487 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 135429 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135428 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135369 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135368 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135309 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135308 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135249 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135248 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 135189 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135188 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135129 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135128 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135069 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 135068 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 135014 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 135013 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 134960 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 134959 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 134901 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134900 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134857 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 105641 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 105699 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105700 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105759 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105760 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105819 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105820 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 105879 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 105880 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 105939 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105940 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 105999 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106000 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106059 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106060 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106114 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 106115 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 106168 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 106169 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 106227 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106228 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106271
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 136194 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 136136 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136135 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136076 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136075 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 136016 Query: 182 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 136015 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 135956 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135955 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 135896 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135895 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135836 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135835 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135776 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 135775 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 135721 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 135720 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 135667 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 135666 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 135608 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135607 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135564 Score = 926 bits (467), Expect = 0.0 Identities = 605/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 106432 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 106490 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106491 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106550 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106551 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106610 Query: 182 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 106611 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 106670 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106671 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 106730 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106731 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 106790 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106791 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106850 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106851 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106905 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 106906 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 106959 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 106960 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 107018 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107019 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107062
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 922 bits (465), Expect = 0.0 Identities = 603/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 106109 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 106167 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106168 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106227 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106228 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106287 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | || Sbjct: 106288 caatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagag 106347 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106348 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 106407 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106408 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 106467 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 106468 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 106527 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||| ||||||||||||||| | | | | |||||||||||||||||| Sbjct: 106528 gaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgt 106583 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 106584 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 106637 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||| Sbjct: 106638 agccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctg 106696 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106697 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106739 Score = 872 bits (440), Expect = 0.0 Identities = 602/646 (93%), Gaps = 15/646 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 135800 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 135742 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135741 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135682 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135681 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135622 Query: 182 c-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 240 | ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | | Sbjct: 135621 caaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgaga 135562 Query: 241 gtccagtagccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtg 299 ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| Sbjct: 135561 gtccagtagccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtg 135502 Query: 300 gaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccga 358 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135501 gaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccga 135442 Query: 359 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 418 ||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct: 135441 tagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaa 135382 Query: 419 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 478 | |||||||| | |||| ||||||||||||||| | | | | ||||||||||||||| Sbjct: 135381 catgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcc 135326 Query: 479 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 538 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135325 tgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc 135271 Query: 539 gggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 598 |||||||||||||||||||||||| || |||| |||||||||||||||||||||||| | Sbjct: 135270 -ggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-c 135213 Query: 599 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135212 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135167
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 922 bits (465), Expect = 0.0 Identities = 603/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||| Sbjct: 131687 cggagattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaaga 131629 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131628 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 131569 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131568 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 131509 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 131508 caatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaag 131449 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131448 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 131389 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131388 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 131329 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 131328 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 131269 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | ||||| |||||||||||||||| | || | |||||||||||||||| Sbjct: 131268 gaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgt 131213 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 131212 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 131159 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 131158 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 131100 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131099 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 131057 Score = 922 bits (465), Expect = 0.0 Identities = 603/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||| Sbjct: 101758 cggagattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaaga 101816 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101817 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 101876 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101877 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 101936 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 101937 caatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaag 101996 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101997 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 102056 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102057 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 102116 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 102117 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 102176 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | ||||| |||||||||||||||| | || | |||||||||||||||| Sbjct: 102177 gaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgt 102232 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 102233 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 102286 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 102287 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 102345 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102346 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 102388
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 922 bits (465), Expect = 0.0 Identities = 603/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 471 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 530 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 531 gaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgt 586 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 587 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 640 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 641 agccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaa-cctg 699 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 700 ggtgatctatccatgaccaggatggagcttgggtgaaactaag 742
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 922 bits (465), Expect = 0.0 Identities = 603/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 136076 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 136018 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136017 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135958 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135957 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135898 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | || Sbjct: 135897 caatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagag 135838 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135837 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 135778 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135777 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 135718 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 135717 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 135658 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||| ||||||||||||||| | | | | |||||||||||||||||| Sbjct: 135657 gaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgt 135602 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 135601 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 135548 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||| Sbjct: 135547 agccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctg 135489 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135488 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135446 Score = 922 bits (465), Expect = 0.0 Identities = 603/643 (93%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 106331 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 106389 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106390 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 106449 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106450 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 106509 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | || Sbjct: 106510 caatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagag 106569 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106570 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 106629 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106630 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 106689 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 106690 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 106749 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||| ||||||||||||||| | | | | |||||||||||||||||| Sbjct: 106750 gaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgt 106805 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 106806 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-gg 106859 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||| Sbjct: 106860 agccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctg 106918 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106919 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106961
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 918 bits (463), Expect = 0.0 Identities = 601/640 (93%), Gaps = 14/640 (2%) Strand = Plus / Minus Query: 6 gattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 65 ||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||||| Sbjct: 135921 gattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagaca 135863 Query: 66 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135862 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 135803 Query: 126 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135802 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 135743 Query: 186 acaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcc 244 |||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||||| Sbjct: 135742 acaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcc 135683 Query: 245 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135682 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 135623 Query: 305 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135622 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 135563 Query: 365 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 424 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 135562 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 135503 Query: 425 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 484 |||| | |||||||||||||||||||| | || | ||||||||||||||||||||| Sbjct: 135502 accg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttga 135448 Query: 485 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagc 544 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 135447 agaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-ggagc 135394 Query: 545 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135393 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggt 135335 Query: 605 gatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||| |||||||||| Sbjct: 135334 gatctatccatgaccaggatgaagcttgggtgaaactaag 135295 Score = 918 bits (463), Expect = 0.0 Identities = 601/640 (93%), Gaps = 14/640 (2%) Strand = Plus / Plus Query: 6 gattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 65 ||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||||| Sbjct: 106217 gattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagaca 106275 Query: 66 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106276 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 106335 Query: 126 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106336 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 106395 Query: 186 acaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcc 244 |||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||||| Sbjct: 106396 acaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcc 106455 Query: 245 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106456 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 106515 Query: 305 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106516 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 106575 Query: 365 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 424 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 106576 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 106635 Query: 425 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 484 |||| | |||||||||||||||||||| | || | ||||||||||||||||||||| Sbjct: 106636 accg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttga 106690 Query: 485 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagc 544 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 106691 agaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-ggagc 106744 Query: 545 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106745 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggt 106803 Query: 605 gatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||| |||||||||| Sbjct: 106804 gatctatccatgaccaggatgaagcttgggtgaaactaag 106843
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 918 bits (463), Expect = 0.0 Identities = 604/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 135454 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 135396 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135395 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 135336 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135335 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 135276 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 135275 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 135216 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135215 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 135156 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135155 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135096 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135095 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135036 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 135035 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 134981 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 134980 ttgaagaatgagccggcgactaataggcagtggcttggttaag-----ggaacccacc-g 134927 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 134926 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 134868 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134867 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134824 Score = 918 bits (463), Expect = 0.0 Identities = 604/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 105608 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 105666 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105667 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 105726 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105727 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 105786 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||| Sbjct: 105787 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaa 105846 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 105847 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 105906 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105907 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 105966 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 105967 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 106026 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 106027 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 106081 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 106082 ttgaagaatgagccggcgactaataggcagtggcttggttaag-----ggaacccacc-g 106135 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 106136 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 106194 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106195 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106238
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 916 bits (462), Expect = 0.0 Identities = 604/644 (93%), Gaps = 13/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 104 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 162 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gacaacctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 222 Query: 122 cgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 282 Query: 181 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 240 ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| | Sbjct: 283 gcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctaga 342 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 343 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 402 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 462 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 463 gtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaaca 522 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | | | ||||||||||||||||| Sbjct: 523 tgaaaccg---taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcctg 578 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 579 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 632 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 633 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 691 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 692 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 902 bits (455), Expect = 0.0 Identities = 602/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||||| Sbjct: 139400 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaaga 139342 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 139341 gacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcc 139282 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139281 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 139222 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | || Sbjct: 139221 caataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatag 139162 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 139161 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 139102 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139101 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 139042 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| | Sbjct: 139041 cgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacat 138982 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctg 480 ||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 138981 gaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctg 138927 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 138926 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 138873 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 138872 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 138814 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138813 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138770 Score = 902 bits (455), Expect = 0.0 Identities = 602/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||||| Sbjct: 109697 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaaga 109755 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 109756 gacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcc 109815 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109816 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 109875 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | || Sbjct: 109876 caataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatag 109935 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 109936 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 109995 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109996 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 110055 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| | Sbjct: 110056 cgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacat 110115 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctg 480 ||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 110116 gaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctg 110170 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 110171 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 110224 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 110225 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 110283 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110284 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110327
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 902 bits (455), Expect = 0.0 Identities = 603/644 (93%), Gaps = 15/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 79 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 137 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 197 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 257 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | ||| ||| |||||| | ||||| ||| Sbjct: 258 caatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaa 316 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 317 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 376 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 436 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 437 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 496 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 497 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 551 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 552 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 605 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 606 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 664 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 665 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 708
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 898 bits (453), Expect = 0.0 Identities = 603/646 (93%), Gaps = 14/646 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 139609 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 139551 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139550 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 139491 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139490 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 139431 Query: 182 caatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| || || ||| ||||||||||||| | | Sbjct: 139430 caatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgaga 139371 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139370 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 139311 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139310 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccata 139251 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 139250 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 139191 Query: 421 tgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcc 478 |||||||| | |||||||||||||||||||| || | | ||||||||||||||| Sbjct: 139190 tgaaaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcc 139134 Query: 479 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 538 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139133 tgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc 139079 Query: 539 gggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 598 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| | Sbjct: 139078 -ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-c 139021 Query: 599 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139020 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138975 Score = 898 bits (453), Expect = 0.0 Identities = 603/646 (93%), Gaps = 14/646 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 109690 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 109748 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109749 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 109808 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109809 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 109868 Query: 182 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| || || ||| ||||||||||||| | | Sbjct: 109869 caatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgaga 109928 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 109929 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 109988 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109989 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccata 110048 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110049 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 110108 Query: 421 tgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcc 478 |||||||| | |||||||||||||||||||| || | | ||||||||||||||| Sbjct: 110109 tgaaaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcc 110165 Query: 479 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 538 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110166 tgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc 110220 Query: 539 gggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 598 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| | Sbjct: 110221 -ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-c 110278 Query: 599 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110279 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110324
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 121 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 181 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 301 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 476 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 535 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 536 accgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 595 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75066 acc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 75008 Query: 596 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75007 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 74960 Score = 238 bits (120), Expect = 2e-59 Identities = 123/124 (99%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75608 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 75549 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75548 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 75489 Query: 122 cgta 125 |||| Sbjct: 75488 cgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 52 gcaggcaagagacaacctggcgaactgaaacatcttagta 91 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Plus Query: 121 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 181 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 301 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 476 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 535 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 536 accgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 595 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 382472 acc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 382530 Query: 596 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382531 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 382578 Score = 238 bits (120), Expect = 2e-59 Identities = 123/124 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 381930 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 381989 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381990 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 382049 Query: 122 cgta 125 |||| Sbjct: 382050 cgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 52 gcaggcaagagacaacctggcgaactgaaacatcttagta 91 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 52 gcaggcaagagacaacctggcgaactgaaacatcttagta 91 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 121 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 181 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 301 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 476 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 535 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 536 accgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 595 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 113157 acc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 113099 Query: 596 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113098 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 113051 Score = 238 bits (120), Expect = 2e-59 Identities = 123/124 (99%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 113699 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 113640 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113639 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 113580 Query: 122 cgta 125 |||| Sbjct: 113579 cgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 52 gcaggcaagagacaacctggcgaactgaaacatcttagta 91 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 121 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 181 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 301 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 476 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 535 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 536 accgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 595 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 367839 acc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 367781 Query: 596 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367780 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 367733 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 121 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 181 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 301 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 476 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 535 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 536 accgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 595 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 184444 acc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 184386 Query: 596 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184385 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 184338 Score = 238 bits (120), Expect = 2e-59 Identities = 123/124 (99%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 368381 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 368322 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368321 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 368262 Query: 122 cgta 125 |||| Sbjct: 368261 cgta 368258 Score = 238 bits (120), Expect = 2e-59 Identities = 123/124 (99%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 184986 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 184927 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184926 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 184867 Query: 122 cgta 125 |||| Sbjct: 184866 cgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 52 gcaggcaagagacaacctggcgaactgaaacatcttagta 91 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 894 bits (451), Expect = 0.0 Identities = 601/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 142775 cggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 142717 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142716 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 142657 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142656 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 142597 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaa 240 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | | Sbjct: 142596 tcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgaga 142537 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142536 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 142477 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142476 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 142417 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 142416 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 142357 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | ||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 142356 tgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 142302 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 142301 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 142248 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 142247 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 142189 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142188 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 142145 Score = 894 bits (451), Expect = 0.0 Identities = 601/644 (93%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 110553 cggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 110611 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110612 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 110671 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110672 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 110731 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaa 240 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | | Sbjct: 110732 tcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgaga 110791 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110792 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 110851 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 110852 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 110911 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110912 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 110971 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | ||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 110972 tgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 111026 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 111027 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 111080 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 111081 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 111139 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111140 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 111183
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 888 bits (448), Expect = 0.0 Identities = 600/644 (93%), Gaps = 15/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||| | ||||||||||||| |||||||||| Sbjct: 600 cggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaaga 658 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 718 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 778 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 779 caatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaag 838 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 839 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 898 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 958 Query: 362 cgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | || ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 959 ccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 1018 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | ||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 1019 tgaaaccg---taagctctcaagcagtgggaggagacag---gctctgaccgcgtgcctg 1072 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 1073 ttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc-g 1126 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 1127 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cct 1185 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1186 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 1229
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 882 bits (445), Expect = 0.0 Identities = 603/646 (93%), Gaps = 16/646 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 1870 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 1928 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag-cgattc 120 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 1929 gacaacctggcgaactgaaccatcttagtagccagaggaaaagaaagcaaaaggcgattc 1988 Query: 121 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1989 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 2048 Query: 181 gcaatacaagcgtt-gtgctgctaggcgaagcggtt-gagtgccgcaccctagatggcta 238 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| | Sbjct: 2049 gcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcga 2108 Query: 239 aagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2109 aagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgt 2168 Query: 299 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2169 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 2228 Query: 359 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 418 |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct: 2229 tagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaa 2288 Query: 419 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 478 | |||||||| | |||||||||||||||||||| | || | ||||||||||||||| Sbjct: 2289 catgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcc 2343 Query: 479 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 538 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2344 tgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc 2398 Query: 539 gggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 598 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| | Sbjct: 2399 -ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-c 2456 Query: 599 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2457 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2502
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 870 bits (439), Expect = 0.0 Identities = 596/643 (92%), Gaps = 14/643 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||| | ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 291 caatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| | Sbjct: 471 cgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacat 530 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | ||||| |||||||||||||| || || |||||| ||||||||||| Sbjct: 531 gaaaccg---taagctctcaagcagtgggaggagacag---gctctgaacgcgtgcctgt 584 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||| ||||||||||||||||||| ||||||||||||||||| |||||||||| || Sbjct: 585 tgaaaaatgagccggcgactcatacgcagtggcttggttaag-----ggaacccacc-gg 638 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 639 agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctg 697 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 698 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 740
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 864 bits (436), Expect = 0.0 Identities = 597/645 (92%), Gaps = 13/645 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||| ||| |||||| ||||||||||||| |||||||||| Sbjct: 86366 cggagattcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaaga 86424 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86425 gacaacctggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcc 86484 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86485 cgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 86544 Query: 182 c--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaa 239 | |||| |||| |||||||||||||||||||||||||| | ||||||||||||| | Sbjct: 86545 cccaatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgag 86604 Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 86605 agtccagtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtg 86664 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86665 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 86724 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 86725 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 86784 Query: 420 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 479 |||||||| | |||||||||||||||||||| || ||||||||||||||||||| Sbjct: 86785 atgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcct 86841 Query: 480 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 539 |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 86842 gttgaagaatgagccggcgacttataggcagtggcttggttaag-----ggaacccacc- 86895 Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 ||||||||||||| |||||||||| || |||| |||||||||||||||||||||||| || Sbjct: 86896 ggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cc 86954 Query: 600 tgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86955 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 86999
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 864 bits (436), Expect = 0.0 Identities = 597/645 (92%), Gaps = 13/645 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||||||| Sbjct: 88452 cggagattcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaaga 88510 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 88511 gacaacctggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcc 88570 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88571 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 88630 Query: 182 ca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaa 239 || ||| |||| |||||||||||||||||||||||||| | ||||||||||||| | Sbjct: 88631 cacaatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgag 88690 Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 88691 agtccagtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtg 88750 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88751 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 88810 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 88811 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 88870 Query: 420 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 479 |||||||| | |||||||||||||||||||| || ||||||||||||||||||| Sbjct: 88871 atgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcct 88927 Query: 480 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 539 |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 88928 gttgaagaatgagccggcgacttataggcagtggcttggttaag-----ggaacccacc- 88981 Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 ||||||||||||| |||||||||| || |||| |||||||||||||||||||||||| || Sbjct: 88982 ggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cc 89040 Query: 600 tgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 89041 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 89085
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 860 bits (434), Expect = 0.0 Identities = 592/639 (92%), Gaps = 13/639 (2%) Strand = Plus / Plus Query: 6 gattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 65 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| Sbjct: 4339 gattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagaca 4397 Query: 66 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4398 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 4457 Query: 126 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 185 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4458 gtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaat 4517 Query: 186 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 245 |||||||| ||| ||||||||||||| | || || ||||||||||||| |||||||| Sbjct: 4518 acaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtcca 4577 Query: 246 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4578 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 4637 Query: 306 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4638 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 4697 Query: 366 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 425 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 4698 gtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaa 4757 Query: 426 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 485 ||| | |||||||||||||||||||| | | | |||||||||||||||||||||| Sbjct: 4758 ccg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaa 4812 Query: 486 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagcc 545 |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct: 4813 gaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccacc-ggagcc 4866 Query: 546 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtg 605 |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4867 gtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtg 4925 Query: 606 atctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||| | |||||||||| Sbjct: 4926 atctatccatgaccaggatgaagcttaggtgaaactaag 4964
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 860 bits (434), Expect = 0.0 Identities = 592/639 (92%), Gaps = 13/639 (2%) Strand = Plus / Minus Query: 6 gattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 65 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| Sbjct: 23586 gattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagaca 23528 Query: 66 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23527 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 23468 Query: 126 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 185 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 23467 gtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaat 23408 Query: 186 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 245 |||||||| ||| ||||||||||||| | || || ||||||||||||| |||||||| Sbjct: 23407 acaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtcca 23348 Query: 246 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23347 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 23288 Query: 306 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 23287 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 23228 Query: 366 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 425 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 23227 gtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaa 23168 Query: 426 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 485 ||| | |||||||||||||||||||| | | | |||||||||||||||||||||| Sbjct: 23167 ccg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaa 23113 Query: 486 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagcc 545 |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct: 23112 gaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccacc-ggagcc 23059 Query: 546 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtg 605 |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 23058 gtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtg 23000 Query: 606 atctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||| | |||||||||| Sbjct: 22999 atctatccatgaccaggatgaagcttaggtgaaactaag 22961
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 858 bits (433), Expect = 0.0 Identities = 594/643 (92%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||| ||| |||||||| |||||| |||||||| ||| |||||||||| Sbjct: 105 cggagattcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaaga 163 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 223 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 224 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 283 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| ||| |||||| ||||||||||||||||||||| |||||||| |||||| | || Sbjct: 284 caatataagtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagag 343 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 344 tccagtagccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtgga 403 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 463 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 464 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 523 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 524 gaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgt 580 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| ||||| |||||| |||||||| || ||||||| || Sbjct: 581 tgaagaatgagccggcgacttataggtagtggcctggttaag-----gggacccacc-gg 634 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| | |||| ||||||||| |||||||||||||| |||| Sbjct: 635 agccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacccgaa-cctg 693 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 694 ggtgatctatccatgaccaggatgaagctcgggtgaaactaag 736
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 852 bits (430), Expect = 0.0 Identities = 592/639 (92%), Gaps = 14/639 (2%) Strand = Plus / Plus Query: 6 gattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 65 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| Sbjct: 4608 gattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagaca 4666 Query: 66 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4667 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 4726 Query: 126 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4727 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 4786 Query: 186 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 245 |||||||| ||||||||||||||||| || || || ||||||||||||| |||||||| Sbjct: 4787 acaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtcca 4846 Query: 246 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 305 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 4847 gtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcc 4906 Query: 306 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4907 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 4966 Query: 366 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 425 ||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||| Sbjct: 4967 gtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaa 5026 Query: 426 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 485 ||| | ||||||||| |||||||||| | | | |||||||||||||||||||||| Sbjct: 5027 ccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaa 5080 Query: 486 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagcc 545 |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct: 5081 gaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccacc-ggagcc 5134 Query: 546 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtg 605 |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5135 gtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtg 5193 Query: 606 atctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||| || | |||||||||| Sbjct: 5194 atctatccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 852 bits (430), Expect = 0.0 Identities = 599/645 (92%), Gaps = 19/645 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 204 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 262 Query: 62 gacaacctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattc 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 263 gacaacctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattc 322 Query: 121 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 323 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggaga 381 Query: 181 gcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaa 239 ||||||||||||| |||||||||||||||| || || ||| |||||||||||||| || Sbjct: 382 gcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaa 441 Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 501 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 gaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgat 561 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 ||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||| Sbjct: 562 agcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaatagaac 620 Query: 420 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 479 |||||||| | |||||||||||||||||||| | | |||||||||||||||| Sbjct: 621 atgaaaccg---taagctcccaagcagtgggaggcca----gggctctgaccgcgtgcct 673 Query: 480 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 539 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 674 gttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccacc- 727 Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || Sbjct: 728 ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cc 786 Query: 600 tgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 787 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 831
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 852 bits (430), Expect = 0.0 Identities = 592/639 (92%), Gaps = 14/639 (2%) Strand = Plus / Plus Query: 6 gattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 65 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| Sbjct: 4608 gattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagaca 4666 Query: 66 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4667 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 4726 Query: 126 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4727 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 4786 Query: 186 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 245 |||||||| ||||||||||||||||| || || || ||||||||||||| |||||||| Sbjct: 4787 acaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtcca 4846 Query: 246 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 305 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 4847 gtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcc 4906 Query: 306 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4907 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 4966 Query: 366 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 425 ||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||| Sbjct: 4967 gtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaa 5026 Query: 426 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 485 ||| | ||||||||| |||||||||| | | | |||||||||||||||||||||| Sbjct: 5027 ccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaa 5080 Query: 486 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagcc 545 |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct: 5081 gaatgagccggcgactcataggcagtggcttggttaag-----ggaaaccacc-ggagcc 5134 Query: 546 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtg 605 |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5135 gtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtg 5193 Query: 606 atctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||| || | |||||||||| Sbjct: 5194 atctatccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 841 bits (424), Expect = 0.0 Identities = 587/633 (92%), Gaps = 15/633 (2%) Strand = Plus / Minus Query: 15 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 74 |||||||||||||| |||||| ||||||||||| | |||||||||||||||||||| || Sbjct: 131753 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtga 131695 Query: 75 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131694 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 131635 Query: 135 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 194 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131634 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 131575 Query: 195 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 252 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 131574 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 131515 Query: 253 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 312 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131514 aaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtga 131455 Query: 313 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 372 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131454 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtac 131395 Query: 373 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 432 |||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 131394 cgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---t 131338 Query: 433 gagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 491 |||||||||||||||||||| || | || |||||||||||||||||||||||||||| Sbjct: 131337 aagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatga 131279 Query: 492 gccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcg 551 |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| Sbjct: 131278 gccggcgactcataggcagtggcttggttaag-----ggaaaccacc-ggagccgtagcg 131225 Query: 552 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctat 611 |||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 131224 aaagcgagtcttcacagggcaattgtcactgcttatggacccgaa-cctgggtgatctat 131166 Query: 612 ccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||| |||||||||| Sbjct: 131165 ccatgaccaggatgaagcttgggtgaaactaag 131133 Score = 841 bits (424), Expect = 0.0 Identities = 587/633 (92%), Gaps = 15/633 (2%) Strand = Plus / Plus Query: 15 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 74 |||||||||||||| |||||| ||||||||||| | |||||||||||||||||||| || Sbjct: 103641 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtga 103699 Query: 75 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103700 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 103759 Query: 135 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 194 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 103760 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 103819 Query: 195 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 252 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 103820 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 103879 Query: 253 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 312 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103880 aaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtga 103939 Query: 313 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 372 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103940 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtac 103999 Query: 373 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 432 |||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 104000 cgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---t 104056 Query: 433 gagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 491 |||||||||||||||||||| || | || |||||||||||||||||||||||||||| Sbjct: 104057 aagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatga 104115 Query: 492 gccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcg 551 |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| Sbjct: 104116 gccggcgactcataggcagtggcttggttaag-----ggaaaccacc-ggagccgtagcg 104169 Query: 552 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctat 611 |||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 104170 aaagcgagtcttcacagggcaattgtcactgcttatggacccgaa-cctgggtgatctat 104228 Query: 612 ccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||| |||||||||| Sbjct: 104229 ccatgaccaggatgaagcttgggtgaaactaag 104261
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 831 bits (419), Expect = 0.0 Identities = 593/644 (92%), Gaps = 14/644 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||| Sbjct: 52582 cggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaaga 52524 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52523 gataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 52464 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 52463 catagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagag 52404 Query: 182 caatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaa 240 ||||| ||| || ||||||||||||||| | | |||| ||| |||||||||||||| ||| Sbjct: 52403 caataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaa 52344 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct: 52343 gtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtgg 52284 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 52283 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgata 52224 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 52223 gttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaaca 52164 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 52163 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 52109 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 |||||||||||||||||||||||||||||| |||||||||||| |||||||||| | Sbjct: 52108 ttgaagaatgagccggcgactcataggcagcggcttggttaag-----ggaacccacc-g 52055 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| ||| Sbjct: 52054 gagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaa-cct 51996 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 51995 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 51952 Score = 831 bits (419), Expect = 0.0 Identities = 593/644 (92%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||| Sbjct: 37246 cggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaaga 37304 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37305 gataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 37364 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 37365 catagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagag 37424 Query: 182 caatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaa 240 ||||| ||| || ||||||||||||||| | | |||| ||| |||||||||||||| ||| Sbjct: 37425 caataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaa 37484 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct: 37485 gtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtgg 37544 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 37545 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgata 37604 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 37605 gttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaaca 37664 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 37665 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 37719 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 |||||||||||||||||||||||||||||| |||||||||||| |||||||||| | Sbjct: 37720 ttgaagaatgagccggcgactcataggcagcggcttggttaag-----ggaacccacc-g 37773 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| ||| Sbjct: 37774 gagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaa-cct 37832 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37833 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 37876
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 831 bits (419), Expect = 0.0 Identities = 593/644 (92%), Gaps = 14/644 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||| Sbjct: 4174 cggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaaga 4232 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4233 gataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 4292 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4293 catagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagag 4352 Query: 182 caatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaa 240 ||||| ||| || ||||||||||||||| | | |||| ||| |||||||||||||| ||| Sbjct: 4353 caataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaa 4412 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct: 4413 gtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtgg 4472 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4473 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgata 4532 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 4533 gttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaaca 4592 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 4593 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 4647 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 |||||||||||||||||||||||||||||| |||||||||||| |||||||||| | Sbjct: 4648 ttgaagaatgagccggcgactcataggcagcggcttggttaag-----ggaacccacc-g 4701 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| ||| Sbjct: 4702 gagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaa-cct 4760 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4761 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 4804
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 817 bits (412), Expect = 0.0 Identities = 593/649 (91%), Gaps = 17/649 (2%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||| Sbjct: 128342 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaaga 128284 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 128283 gacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcc 128224 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct: 128223 cgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggag 128164 Query: 182 c------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 235 | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 128163 cgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatgg 128104 Query: 236 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 295 | | |||||||||||||||||||||||||||| | ||||| |||| |||||||||||||| Sbjct: 128103 caagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggca 128044 Query: 296 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128043 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 127984 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 ||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||| Sbjct: 127983 cgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaata 127924 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 |||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| | Sbjct: 127923 gaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcat 127867 Query: 476 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 535 ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 127866 gcctgttgaggaatgagccggcgactcataggcagtggcctggttaag-----ggaaccc 127812 Query: 536 accgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 595 ||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||||| Sbjct: 127811 acc-ggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccga 127753 Query: 596 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 | |||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 127752 a-cctgggtgatctatccatgaccaggatgaagcttgggtaaaactaag 127705 Score = 817 bits (412), Expect = 0.0 Identities = 593/649 (91%), Gaps = 17/649 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||| Sbjct: 95105 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaaga 95163 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 95164 gacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcc 95223 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct: 95224 cgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggag 95283 Query: 182 c------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 235 | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95284 cgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatgg 95343 Query: 236 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 295 | | |||||||||||||||||||||||||||| | ||||| |||| |||||||||||||| Sbjct: 95344 caagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggca 95403 Query: 296 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95404 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 95463 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 ||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||| Sbjct: 95464 cgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaata 95523 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 |||| |||||||| | |||||||||||||||||||| ||| ||||||||||||| | Sbjct: 95524 gaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcat 95580 Query: 476 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 535 ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 95581 gcctgttgaggaatgagccggcgactcataggcagtggcctggttaag-----ggaaccc 95635 Query: 536 accgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 595 ||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||||| Sbjct: 95636 acc-ggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccga 95694 Query: 596 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 | |||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 95695 a-cctgggtgatctatccatgaccaggatgaagcttgggtaaaactaag 95742
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 817 bits (412), Expect = 0.0 Identities = 532/566 (93%), Gaps = 12/566 (2%) Strand = Plus / Minus Query: 80 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 138 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 139 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 198 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 199 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 258 |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385 Query: 259 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 318 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325 Query: 319 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 379 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 438 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208 Query: 439 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 498 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 499 actcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcgaaagcga 558 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 148 actcataggcagtggcttggttaag-----ggaacccacc-ggagccgtagcgaaagcga 95 Query: 559 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 618 ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 94 gtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgac 36 Query: 619 caggatgaagcttggatgaaactaag 644 ||||||||||||||| |||||||||| Sbjct: 35 caggatgaagcttgggtgaaactaag 10
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 811 bits (409), Expect = 0.0 Identities = 589/643 (91%), Gaps = 12/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| ||||| Sbjct: 116105 cggagattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaaga 116047 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116046 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattct 115987 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| Sbjct: 115986 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggag 115928 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 | | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| |||| Sbjct: 115927 ctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaag 115868 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 115867 tccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtgga 115808 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 115807 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 115748 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 115747 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 115688 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 115687 gaaaccg---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgt 115631 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||| ||| |||||| || Sbjct: 115630 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggagcccacc-gg 115577 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 115576 agccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaa-cctg 115518 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115517 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 115475 Score = 811 bits (409), Expect = 0.0 Identities = 589/643 (91%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| ||||| Sbjct: 86015 cggagattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaaga 86073 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86074 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattct 86133 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| Sbjct: 86134 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggag 86192 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 | | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| |||| Sbjct: 86193 ctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaag 86252 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 86253 tccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtgga 86312 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 86313 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 86372 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 86373 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 86432 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 86433 gaaaccg---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgt 86489 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||| ||| |||||| || Sbjct: 86490 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggagcccacc-gg 86543 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 86544 agccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaa-cctg 86602 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86603 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 86645
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 805 bits (406), Expect = 0.0 Identities = 412/414 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 162 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 222 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 282 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 342 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 343 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 402 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 462 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 803 bits (405), Expect = 0.0 Identities = 587/643 (91%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||| ||||| Sbjct: 105 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaaga 163 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 223 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 224 catagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggag 283 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||| | |||||||| |||||||||||| ||||| | | ||||| ||||||| | || Sbjct: 284 caaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagag 343 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 344 tccagtagccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtgga 403 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 404 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 463 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 464 cgaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacat 523 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 524 gaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgt 580 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| ||||| |||||| |||||||| |||||||||| || Sbjct: 581 tgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccacc-gg 634 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||| Sbjct: 635 agccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cctg 693 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 694 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 736
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 797 bits (402), Expect = 0.0 Identities = 588/644 (91%), Gaps = 12/644 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| ||| Sbjct: 146455 cggagattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgaga 146397 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146396 gacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 146337 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146336 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 146277 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | || Sbjct: 146276 caatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagag 146217 Query: 242 tccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 146216 tccagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcag 146157 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 146156 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 146097 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 || |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 146096 gcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaaca 146037 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | ||||||||||||||||||| ||| |||| ||||||||||||||| Sbjct: 146036 tgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctg 145980 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||| |||||||||||| |||||||| |||||||||| | Sbjct: 145979 ttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccacc-g 145926 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| Sbjct: 145925 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cct 145867 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145866 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 145823 Score = 797 bits (402), Expect = 0.0 Identities = 588/644 (91%), Gaps = 12/644 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| ||| Sbjct: 112007 cggagattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgaga 112065 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112066 gacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 112125 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112126 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 112185 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | || Sbjct: 112186 caatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagag 112245 Query: 242 tccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 112246 tccagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcag 112305 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 112306 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 112365 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 || |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 112366 gcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaaca 112425 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | ||||||||||||||||||| ||| |||| ||||||||||||||| Sbjct: 112426 tgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctg 112482 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||| |||||||||||| |||||||| |||||||||| | Sbjct: 112483 ttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccacc-g 112536 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| Sbjct: 112537 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cct 112595 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112596 gggtgatctatccatgaccaggatgaagcttgggtgaaactaag 112639
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 797 bits (402), Expect = 0.0 Identities = 408/410 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 17 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 76 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 136 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 196 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 256 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 257 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 316 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 376 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 411 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 426
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 793 bits (400), Expect = 0.0 Identities = 589/647 (91%), Gaps = 15/647 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||||||||||| |||||||| ||| || ||||||| Sbjct: 105 cggagattcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaaga 163 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 164 gacaacccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattct 223 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 224 cgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggag 283 Query: 182 caatacaa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 237 | |||||| || ||| ||||||||||||||| ||||||| | |||||| |||||| Sbjct: 284 ctatacaaataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtg 343 Query: 238 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 297 | ||||||||| |||||||||| || | |||||||||| ||||||||||||||||||||| Sbjct: 344 agagtccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacg 403 Query: 298 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 463 Query: 358 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 417 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 464 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaataga 523 Query: 418 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 477 || |||||||| | |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 524 acatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgc 580 Query: 478 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 537 |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| Sbjct: 581 ctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccac 635 Query: 538 cgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 597 | ||||||||||||||||| |||||| | |||| |||||||||||||||||||||||| Sbjct: 636 c-ggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaa- 693 Query: 598 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 694 cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 740
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 789 bits (398), Expect = 0.0 Identities = 586/643 (91%), Gaps = 8/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||||||||||| |||||||||||| || ||||||| Sbjct: 88 cggagattcccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaaga 146 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 147 gacaacctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattct 206 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 207 cgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggag 266 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 | | | |||| |||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 267 ctaaagaagcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagag 326 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||| |||||||||| || ||||| ||||| ||||||||| ||||||||||||||| Sbjct: 327 tccagtaaccgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtgga 386 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 446 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 447 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 506 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| | |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 507 gaaaccg---taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgt 563 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||||||| | | ||||| || Sbjct: 564 tgaagaatgagccggcgacttataggcagtggcctggttaagggaaag--aaccacc-gg 620 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||| ||||||||||||||||| ||||| |||||||||||||||||||||||| |||| Sbjct: 621 agccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccgaa-cctg 679 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 680 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 722
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 787 bits (397), Expect = 0.0 Identities = 585/643 (90%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||| Sbjct: 3994 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaaga 4052 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4053 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 4112 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4113 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 4172 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 4173 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 4232 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||| |||| |||| || | ||||||||||||||||||||||||| Sbjct: 4233 tccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgga 4292 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4293 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 4352 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 4353 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 4412 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||| || | |||| |||||||||| |||| ||| ||||||||||||||||||||| Sbjct: 4413 gaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgt 4469 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||| |||| |||| || Sbjct: 4470 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcacc-gg 4523 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 4524 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctg 4582 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4583 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 4625
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 787 bits (397), Expect = 0.0 Identities = 585/643 (90%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||| Sbjct: 104 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaaga 162 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 163 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 222 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 282 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 283 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 342 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||| |||| |||| || | ||||||||||||||||||||||||| Sbjct: 343 tccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgga 402 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 462 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 463 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 522 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||| || | |||| |||||||||| |||| ||| ||||||||||||||||||||| Sbjct: 523 gaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgt 579 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||| |||| |||| || Sbjct: 580 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcacc-gg 633 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 634 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctg 692 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 787 bits (397), Expect = 0.0 Identities = 585/643 (90%), Gaps = 11/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||| Sbjct: 151141 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaaga 151083 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 151082 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 151023 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151022 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 150963 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 150962 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 150903 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||| |||| |||| || | ||||||||||||||||||||||||| Sbjct: 150902 tccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgga 150843 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150842 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 150783 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 150782 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 150723 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||| || | |||| |||||||||| |||| ||| ||||||||||||||||||||| Sbjct: 150722 gaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgt 150666 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||| |||| |||| || Sbjct: 150665 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcacc-gg 150612 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 150611 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctg 150553 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150552 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 150510 Score = 787 bits (397), Expect = 0.0 Identities = 585/643 (90%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||| Sbjct: 117525 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaaga 117583 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117584 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 117643 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117644 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 117703 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 117704 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 117763 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||| |||| |||| || | ||||||||||||||||||||||||| Sbjct: 117764 tccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgga 117823 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117824 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 117883 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 117884 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 117943 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||| || | |||| |||||||||| |||| ||| ||||||||||||||||||||| Sbjct: 117944 gaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgt 118000 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||| |||| |||| || Sbjct: 118001 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcacc-gg 118054 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 118055 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctg 118113 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118114 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 118156
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 787 bits (397), Expect = 0.0 Identities = 585/643 (90%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||| Sbjct: 104 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaaga 162 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 163 gacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcc 222 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 223 cgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagag 282 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | || Sbjct: 283 caatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagag 342 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||| |||| |||| || | ||||||||||||||||||||||||| Sbjct: 343 tccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtgga 402 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 462 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 463 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 522 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 |||| || | |||| |||||||||| |||| ||| ||||||||||||||||||||| Sbjct: 523 gaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgt 579 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| |||||||||||| |||||||| |||| |||| || Sbjct: 580 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcacc-gg 633 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 634 agccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctg 692 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 781 bits (394), Expect = 0.0 Identities = 586/644 (90%), Gaps = 12/644 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||| Sbjct: 118045 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaaga 117987 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117986 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 117927 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117926 catagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagag 117867 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||| | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 117866 caaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagag 117807 Query: 242 tccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||| || | || ||||||| |||||||||||||||||||||||| Sbjct: 117806 tccagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtgg 117747 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 117746 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 117687 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 117686 gtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 117627 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 117626 tgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctg 117570 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||| ||||| |||||| |||||||| |||||||||| | Sbjct: 117569 ttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccacc-g 117516 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||| Sbjct: 117515 gagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cct 117457 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 117456 gggtgatctaaccatgaccaggatgaagcttgggtgaaactaag 117413 Score = 781 bits (394), Expect = 0.0 Identities = 586/644 (90%), Gaps = 12/644 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||| Sbjct: 90057 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaaga 90115 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90116 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 90175 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90176 catagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagag 90235 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||| | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 90236 caaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagag 90295 Query: 242 tccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||| || | || ||||||| |||||||||||||||||||||||| Sbjct: 90296 tccagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtgg 90355 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 90356 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 90415 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 90416 gtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 90475 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 90476 tgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctg 90532 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||| ||||| |||||| |||||||| |||||||||| | Sbjct: 90533 ttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccacc-g 90586 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||| Sbjct: 90587 gagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cct 90645 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 90646 gggtgatctaaccatgaccaggatgaagcttgggtgaaactaag 90689
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 765 bits (386), Expect = 0.0 Identities = 406/410 (99%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 235 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 294 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 295 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 355 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 415 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 475 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 535 caccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 594 |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 301 cacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 359 Query: 595 aaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 408
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 763 bits (385), Expect = 0.0 Identities = 574/631 (90%), Gaps = 12/631 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||| Sbjct: 2148 cggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaaga 2206 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2207 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 2266 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2267 catagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagag 2326 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||| | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | || Sbjct: 2327 caaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagag 2386 Query: 242 tccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||| || | || ||||||| |||||||||||||||||||||||| Sbjct: 2387 tccagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtgg 2446 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2447 aatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgata 2506 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 2507 gtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaaca 2566 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 2567 tgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctg 2623 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||| ||||| |||||| |||||||| |||||||||| | Sbjct: 2624 ttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccacc-g 2677 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||| Sbjct: 2678 gagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cct 2736 Query: 601 gggtgatctatccatgaccaggatgaagctt 631 |||||||||| |||||||||||||||||||| Sbjct: 2737 gggtgatctaaccatgaccaggatgaagctt 2767
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 763 bits (385), Expect = 0.0 Identities = 488/518 (94%), Gaps = 7/518 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 182 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 240 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttgg 518 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggcttgg 1
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 37 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 96 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 97 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 157 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 215 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 216 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 275 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 276 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 336 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 395 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 396 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 455 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 456 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 516 tggtta 521 |||||| Sbjct: 492 tggtta 497
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 718 bits (362), Expect = 0.0 Identities = 431/452 (95%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 46356 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 46414 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 46415 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcc 46474 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 46475 cgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagag 46534 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| || Sbjct: 46535 caatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagag 46594 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46595 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 46654 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46655 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 46714 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 46715 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 46774 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | ||||| |||||||||||||| Sbjct: 46775 gaaaccg---taagctctcaagcagtgggagg 46803 Score = 264 bits (133), Expect = 3e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 46878 -----ggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 46931 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46932 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 46990 Query: 644 g 644 | Sbjct: 46991 g 46991
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 718 bits (362), Expect = 0.0 Identities = 431/452 (95%), Gaps = 4/452 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||| Sbjct: 130431 cggagattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaaga 130373 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130372 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 130313 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130312 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 130253 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 | |||||||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 130252 ctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 130193 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130192 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 130133 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130132 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 130073 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 130072 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 130013 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | |||||||||||||||||||| Sbjct: 130012 gaaaccg---taagctcccaagcagtgggagg 129984 Score = 718 bits (362), Expect = 0.0 Identities = 431/452 (95%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||| Sbjct: 102025 cggagattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaaga 102083 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102084 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 102143 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102144 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 102203 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 | |||||||||| |||||||||||||||||||| ||||||||||||||||||||| | || Sbjct: 102204 ctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagag 102263 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102264 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 102323 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102324 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 102383 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 102384 tgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 102443 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | |||||||||||||||||||| Sbjct: 102444 gaaaccg---taagctcccaagcagtgggagg 102472 Score = 248 bits (125), Expect = 2e-62 Identities = 169/181 (93%), Gaps = 7/181 (3%) Strand = Plus / Minus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 129909 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 129856 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 129855 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 129797 Query: 644 g 644 | Sbjct: 129796 g 129796 Score = 248 bits (125), Expect = 2e-62 Identities = 169/181 (93%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 102547 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 102600 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102601 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 102659 Query: 644 g 644 | Sbjct: 102660 g 102660
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 710 bits (358), Expect = 0.0 Identities = 430/452 (95%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| | Sbjct: 471 cgaagtactaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacat 530 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | |||||||||||||||||||| Sbjct: 531 gaaaccg---taagctcccaagcagtgggagg 559 Score = 180 bits (91), Expect = 4e-42 Identities = 135/147 (91%), Gaps = 7/147 (4%) Strand = Plus / Plus Query: 498 gactcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcgaaagcg 557 ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcg 645 Query: 558 agtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatga 617 |||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 646 agtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatga 704 Query: 618 ccaggatgaagcttggatgaaactaag 644 |||||||||||||||| |||||||||| Sbjct: 705 ccaggatgaagcttgggtgaaactaag 731
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 710 bits (358), Expect = 0.0 Identities = 430/452 (95%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||| | Sbjct: 471 cgaagtactaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacat 530 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | |||||||||||||||||||| Sbjct: 531 gaaaccg---taagctcccaagcagtgggagg 559 Score = 232 bits (117), Expect = 1e-57 Identities = 167/181 (92%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||||||||| |||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 641 -----ggaacccacc-ggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 695 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 753 Query: 644 g 644 | Sbjct: 754 g 754
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 710 bits (358), Expect = 0.0 Identities = 430/452 (95%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 471 cgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 530 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | |||||||||||||||||||| Sbjct: 531 gaaaccg---taagctcccaagcagtgggagg 559 Score = 232 bits (117), Expect = 1e-57 Identities = 167/181 (92%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 ||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 695 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 753 Query: 644 g 644 | Sbjct: 754 g 754
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 702 bits (354), Expect = 0.0 Identities = 429/452 (94%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||| | Sbjct: 471 cgaagtaataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacat 530 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | |||||||||||||||||||| Sbjct: 531 gaaaccg---taagctcccaagcagtgggagg 559 Score = 198 bits (100), Expect = 2e-47 Identities = 164/181 (90%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 || ||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 gg----gaacccaccgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 695 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 753 Query: 644 g 644 | Sbjct: 754 g 754
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 702 bits (354), Expect = 0.0 Identities = 429/452 (94%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 291 caatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| | Sbjct: 471 cgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacat 530 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg 453 ||||||| | |||||||||||||||||||| Sbjct: 531 gaaaccg---taagctcccaagcagtgggagg 559 Score = 202 bits (102), Expect = 1e-48 Identities = 163/181 (90%), Gaps = 8/181 (4%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 ||||| ||| |||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaacccaac------ggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 693 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 694 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 752 Query: 644 g 644 | Sbjct: 753 g 753
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 698 bits (352), Expect = 0.0 Identities = 550/609 (90%), Gaps = 14/609 (2%) Strand = Plus / Plus Query: 37 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 96 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ctgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccag 197 Query: 97 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 156 ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 198 aggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaa 257 Query: 157 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 215 ||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || Sbjct: 258 ccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagctt 317 Query: 216 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 275 | || |||||||||||||| |||||||||||| | |||||||||||| || ||||| Sbjct: 318 aaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctct 377 Query: 276 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 335 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 378 gacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaag 437 Query: 336 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 395 ||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 438 gctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa- 496 Query: 396 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 455 ||||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 497 ccccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggag 553 Query: 456 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 554 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggct 611 Query: 516 tggttaagggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgatt 575 |||||||| |||||||||| |||||| |||||||||||||| || ||||| | ||| Sbjct: 612 tggttaag-----ggaacccacc-ggagccatagcgaaagcgagtattcataggactatt 665 Query: 576 gtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggat 635 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | | Sbjct: 666 gtcactgcttatggacccgaa-cctgggtgatctatccatgaccaggatgaagctttggt 724 Query: 636 gaaactaag 644 ||||||||| Sbjct: 725 gaaactaag 733
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 696 bits (351), Expect = 0.0 Identities = 357/359 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 8 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 67 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 127 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 187 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 247 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 248 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 307 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 366
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 688 bits (347), Expect = 0.0 Identities = 458/491 (93%), Gaps = 7/491 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||||| Sbjct: 153 cggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaaga 211 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 212 gacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcc 271 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 331 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | || Sbjct: 332 caataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatag 391 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 392 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 451 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 511 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| | Sbjct: 512 cgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacat 571 Query: 422 gaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctg 480 ||||||| | ||||||||||||| |||||| | || | ||||||||||||||||| Sbjct: 572 gaaaccg---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctg 626 Query: 481 ttgaagaatga 491 ||||||||||| Sbjct: 627 ttgaagaatga 637
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 666 bits (336), Expect = 0.0 Identities = 356/360 (98%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 285 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 345 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 405 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 464 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 465 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 525 gaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 584 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 241 gaacggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 299 Query: 585 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 358
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 658 bits (332), Expect = 0.0 Identities = 429/458 (93%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||| | ||||||||||||| |||||||||| Sbjct: 112 cggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaaga 170 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 230 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 290 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||| Sbjct: 291 caatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaag 350 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 351 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 410 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 470 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||| ||| | Sbjct: 471 cgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaacat 529 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaag 459 ||||||| | ||||| |||||||||||||| ||||| Sbjct: 530 gaaaccg---taagctctcaagcagtgggaggagaaag 564 Score = 174 bits (88), Expect = 2e-40 Identities = 111/116 (95%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 529 ggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 588 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 602 ggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatg 660 Query: 589 gacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 661 gacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 715
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 642 bits (324), Expect = 0.0 Identities = 341/344 (99%), Gaps = 2/344 (0%) Strand = Plus / Plus Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-g 239 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 240 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cct 298 Query: 601 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 342
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 626 bits (316), Expect = e-176 Identities = 345/351 (98%), Gaps = 4/351 (1%) Strand = Plus / Minus Query: 296 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 476 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 533 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 534 ccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 593 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122580 ccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 122522 Query: 594 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122521 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122472 Score = 577 bits (291), Expect = e-161 Identities = 300/303 (99%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123366 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 123307 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123306 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 123247 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123246 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 123187 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123186 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 123127 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 123126 tccagtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtgga 123067 Query: 302 atc 304 ||| Sbjct: 123066 atc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 626 bits (316), Expect = e-176 Identities = 345/351 (98%), Gaps = 4/351 (1%) Strand = Plus / Minus Query: 296 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 356 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 416 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 476 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 533 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 534 ccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 593 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12825121 ccacc-ggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 12825063 Query: 594 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825062 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 12825013 Score = 577 bits (291), Expect = e-161 Identities = 300/303 (99%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12825907 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 12825848 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825847 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 12825788 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825787 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 12825728 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825727 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 12825668 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 12825667 tccagtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtgga 12825608 Query: 302 atc 304 ||| Sbjct: 12825607 atc 12825605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 300 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 624 bits (315), Expect = e-176 Identities = 380/398 (95%), Gaps = 4/398 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 101 cggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaaga 159 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 219 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 279 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| |||||||||||||||||||| || | | |||||||||||||| | || Sbjct: 280 caatacaagcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatag 339 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 340 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 399 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 400 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatag 457 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaaccccc 399 |||||||||||||||||||| |||| ||||||||||| Sbjct: 458 tgaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 170 bits (86), Expect = 4e-39 Identities = 132/143 (92%), Gaps = 7/143 (4%) Strand = Plus / Plus Query: 504 taggcagtggcttggttaa-gggaacggaacccaccgggagccgtagcgaaagcgagtct 562 ||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaa-ccgtagcgaaagcgagtct 667 Query: 563 taatagggcgattgtcactgcttatggacccgaaccct-gggtgatctatccatgaccag 621 | ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 668 tcatagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccag 727 Query: 622 gatgaagcttggatgaaactaag 644 |||||||||||| |||||||||| Sbjct: 728 gatgaagcttgggtgaaactaag 750
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 618 bits (312), Expect = e-174 Identities = 370/388 (95%), Gaps = 1/388 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||||||||||| ||||||| ||| ||||||||| |||||||||| Sbjct: 81 cggagattcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaaga 139 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 140 gacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcc 199 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 259 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 |||||||||||| ||||||||||||||||||| || ||||||||||||||| || Sbjct: 260 caatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggag 319 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 320 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 379 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 439 Query: 362 cgaagtagtaccgtgagggaaaggtgaa 389 ||||||||||||||||||||| |||||| Sbjct: 440 cgaagtagtaccgtgagggaagggtgaa 467
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 22 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 81 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 82 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 142 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 201 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 202 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 261 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 262 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 321 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 322 gaccaccttgcaaggctaaatactcctgggtg 353 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 551 bits (278), Expect = e-153 Identities = 437/484 (90%), Gaps = 12/484 (2%) Strand = Plus / Minus Query: 162 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 221 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 222 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 281 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 282 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 342 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 401 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 402 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 461 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 462 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 521 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 522 agggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcact 581 || || ||||||| ||||||||||||| |||||||||| ||||||| ||||||||| Sbjct: 5927 ag-----ggcacccacc-ggagccgtagcgagagcgagtcttcatagggcaattgtcact 5874 Query: 582 gc-ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 640 || ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5873 gctttatggacccgaa-cctgggtgatctatccatgaccaggatgaagc-tggatgaaac 5816 Query: 641 taag 644 |||| Sbjct: 5815 taag 5812 Score = 220 bits (111), Expect = 4e-54 Identities = 148/159 (93%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||||| |||||| ||||||||||||| ||||| ||| Sbjct: 6472 cggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggtaagg 6414 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 | |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 6413 ggcaacctggtgaactgaaacatcttagtaaccagaggaagagaaagcaaaagcgattcc 6354 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 160 ||||||||||||||||||||||||||||||||||||||| Sbjct: 6353 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 545 bits (275), Expect = e-152 Identities = 553/643 (86%), Gaps = 7/643 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||| |||||||||||||||| || ||||| ||||| Sbjct: 144023 cggagattcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaaga 144082 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 144083 gacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcc 144142 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | ||||| ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| Sbjct: 144143 cctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagag 144202 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 || || | || | ||||||||||| ||||||||| |||||| |||||| | || Sbjct: 144203 tgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatag 144262 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||| ||| | |||||| | |||| |||| |||||||||||||||| | Sbjct: 144263 tccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaa 144322 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 144323 atcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatag 144382 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 144383 cgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacat 144442 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| ||||||||||||||||||||| ||| | ||||||| ||||||||||||| Sbjct: 144443 gaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgt 144499 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| ||||| ||||| ||||||||| ||| | || || Sbjct: 144500 tgaagaatgagccggcgacttgtaggcggtggcccggttaaggg---ggagaacccccgg 144556 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| | |||| |||||||| |||||| ||||||| |||| Sbjct: 144557 agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaa-cctg 144615 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 144616 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 144658 Score = 545 bits (275), Expect = e-152 Identities = 553/643 (86%), Gaps = 7/643 (1%) Strand = Plus / Minus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| |||||| |||||||||||||||| || ||||| ||||| Sbjct: 88828 cggagattcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaaga 88769 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 88768 gacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcc 88709 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | ||||| ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| Sbjct: 88708 cctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagag 88649 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 || || | || | ||||||||||| ||||||||| |||||| |||||| | || Sbjct: 88648 tgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatag 88589 Query: 242 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 301 ||||||||||| ||| | |||||| | |||| |||| |||||||||||||||| | Sbjct: 88588 tccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaa 88529 Query: 302 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 361 ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 88528 atcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatag 88469 Query: 362 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 421 ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 88468 cgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacat 88409 Query: 422 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 481 ||||||| ||||||||||||||||||||| ||| | ||||||| ||||||||||||| Sbjct: 88408 gaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgt 88352 Query: 482 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggg 541 |||||||||||||||||||| ||||| ||||| ||||||||| ||| | || || Sbjct: 88351 tgaagaatgagccggcgacttgtaggcggtggcccggttaaggg---ggagaacccccgg 88295 Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||||| | |||| |||||||| |||||| ||||||| |||| Sbjct: 88294 agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaa-cctg 88236 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 88235 ggtgatctatccatgaccaggatgaagcttgggtgaaactaag 88193
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 543 bits (274), Expect = e-151 Identities = 511/585 (87%), Gaps = 15/585 (2%) Strand = Plus / Minus Query: 55 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 114 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 115 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 174 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 175 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 230 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 231 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 290 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 291 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 350 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 351 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 410 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 411 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 470 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 471 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 530 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 138644 Query: 531 aacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 590 |||||||| |||||||||||||||||||||||| ||||| | |||| ||||||||||| Sbjct: 138643 aacccacc-ggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgga 138585 Query: 591 cccgaaccctgggtgatctatccatgaccaggatgaagcttggat 635 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138584 cccgaaccc-gggtgatctatccatgaccaggatgaagcttggat 138541 Score = 543 bits (274), Expect = e-151 Identities = 511/585 (87%), Gaps = 15/585 (2%) Strand = Plus / Plus Query: 55 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 114 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 115 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 174 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 175 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 230 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 231 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 290 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 291 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 350 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 351 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 410 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 411 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 470 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 471 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 530 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 83233 Query: 531 aacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 590 |||||||| |||||||||||||||||||||||| ||||| | |||| ||||||||||| Sbjct: 83234 aacccacc-ggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgga 83292 Query: 591 cccgaaccctgggtgatctatccatgaccaggatgaagcttggat 635 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83293 cccgaaccc-gggtgatctatccatgaccaggatgaagcttggat 83336
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 422 bits (213), Expect = e-115 Identities = 287/308 (93%), Gaps = 4/308 (1%) Strand = Plus / Plus Query: 15 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 74 |||||||||||||| |||||| ||||||||||| | |||||||||||||||| ||| || Sbjct: 2717 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtga 2775 Query: 75 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2776 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 2835 Query: 135 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 194 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2836 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 2895 Query: 195 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 252 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 2896 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 2955 Query: 253 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 312 ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2956 aaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtga 3014 Query: 313 atcagcaa 320 |||||||| Sbjct: 3015 atcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 422 bits (213), Expect = e-115 Identities = 287/308 (93%), Gaps = 4/308 (1%) Strand = Plus / Plus Query: 15 ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcga 74 |||||||||||||| |||||| ||||||||||| | |||||||||||||||| ||| || Sbjct: 972 ataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtga 1030 Query: 75 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 actgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcg 1090 Query: 135 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 194 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1091 agcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtc 1150 Query: 195 gtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccg 252 ||||||||||||||||| | ||| ||| |||||||||||||| | ||||||||||||| Sbjct: 1151 gtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccg 1210 Query: 253 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 312 ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1211 aaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtga 1269 Query: 313 atcagcaa 320 |||||||| Sbjct: 1270 atcagcaa 1277
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 238 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 297 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 298 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 358 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 417 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 418 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 477 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 478 ctgttgaagaatgagccggcgactcataggcagtggcttg 517 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 17 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 76 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 77 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 136 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 137 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 196 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 197 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 256 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 257 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 316 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 317 gcaaggaccaccttgcaag 335 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 141 bits (71), Expect = 3e-30 Identities = 120/135 (88%), Gaps = 6/135 (4%) Strand = Plus / Minus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||||||||| |||||| ||||||||||||||| ||| |||| ||| ||||||| Sbjct: 3189 -----ggaacccacc-ggagccatagcgaaagcgagtcagaatggggcaattctcactgc 3136 Query: 584 ttatggacccgaacc 598 ||||||||||||||| Sbjct: 3135 ttatggacccgaacc 3121 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 344 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 403 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 404 ggtagtgaaatagaacgtgaaacc 427 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 114 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 173 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 174 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 232 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 233 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 292 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 293 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 352 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 353 gaccgata 360 |||||||| Sbjct: 241 gaccgata 248
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 396 bits (200), Expect = e-107 Identities = 324/362 (89%), Gaps = 10/362 (2%) Strand = Plus / Plus Query: 277 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 336 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 337 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 517 ggttaagggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattg 576 |||||||| | ||| || |||||||||||||||||||||||| |||||||| || Sbjct: 615 ggttaaggcga--gaagcc----ggagccgtagcgaaagcgagtctttctagggcgaatg 668 Query: 577 tcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatg 636 ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| || Sbjct: 669 tcactgcttatggacccgaaccc-gggtgatctaaccatggccagggtgaagcttgggtg 727 Query: 637 aa 638 || Sbjct: 728 aa 729 Score = 188 bits (95), Expect = 2e-44 Identities = 143/159 (89%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||| ||| |||||| ||||| || |||||||||||||| || | |||||||| Sbjct: 92 cggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaaga 151 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 211 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 160 | ||||| |||||||||||||||| ||||||||||||| Sbjct: 212 ctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 396 bits (200), Expect = e-107 Identities = 324/362 (89%), Gaps = 10/362 (2%) Strand = Plus / Plus Query: 277 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 336 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 337 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 517 ggttaagggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattg 576 |||||||| | ||| || |||||||||||||||||||||||| |||||||| || Sbjct: 628 ggttaaggcga--gaagcc----ggagccgtagcgaaagcgagtctttctagggcgaatg 681 Query: 577 tcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatg 636 ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| || Sbjct: 682 tcactgcttatggacccgaaccc-gggtgatctaaccatggccagggtgaagcttgggtg 740 Query: 637 aa 638 || Sbjct: 741 aa 742 Score = 188 bits (95), Expect = 2e-44 Identities = 143/159 (89%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||| ||| |||||| ||||| || |||||||||||||| || | |||||||| Sbjct: 105 cggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaaga 164 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 224 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 160 | ||||| |||||||||||||||| ||||||||||||| Sbjct: 225 ctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 396 bits (200), Expect = e-107 Identities = 385/442 (87%), Gaps = 11/442 (2%) Strand = Plus / Plus Query: 199 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 258 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 259 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 318 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 319 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 378 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 379 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 438 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 439 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 498 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 499 actcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcgaaagcga 558 ||| |||||||||||| |||||||| |||| |||| ||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcacc-ggagccgtagcgaaagcga 652 Query: 559 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 618 ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 653 gtc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggc 710 Query: 619 caggatgaagcttggatgaaac 640 ||||||||||||||| |||||| Sbjct: 711 caggatgaagcttgggtgaaac 732 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 38 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 97 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200 Query: 98 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 157 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 260 Query: 158 cgtgaaaacggggttgtgggagagc 182 || |||| ||||||||||||||||| Sbjct: 261 cgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 392 bits (198), Expect = e-106 Identities = 383/440 (87%), Gaps = 11/440 (2%) Strand = Plus / Minus Query: 199 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 258 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 259 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 318 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 319 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 378 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 379 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 438 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 439 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 498 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 499 actcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcgaaagcga 558 ||| |||||||||||| |||||||| |||| |||| ||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcacc-ggagccgtagcgaaagcga 124613 Query: 559 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 618 ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 124612 gtc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggc 124555 Query: 619 caggatgaagcttggatgaa 638 ||||||||||||||| |||| Sbjct: 124554 caggatgaagcttgggtgaa 124535 Score = 392 bits (198), Expect = e-106 Identities = 383/440 (87%), Gaps = 11/440 (2%) Strand = Plus / Plus Query: 199 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 258 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 259 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 318 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 319 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 378 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 379 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 438 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 439 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 498 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 499 actcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcgaaagcga 558 ||| |||||||||||| |||||||| |||| |||| ||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcacc-ggagccgtagcgaaagcga 95253 Query: 559 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 618 ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 95254 gtc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggc 95311 Query: 619 caggatgaagcttggatgaa 638 ||||||||||||||| |||| Sbjct: 95312 caggatgaagcttgggtgaa 95331 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 38 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 97 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065 Query: 98 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 157 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 125064 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 125005 Query: 158 cgtgaaaacggggttgtgggagagc 182 || |||| ||||||||||||||||| Sbjct: 125004 cgcgaaagcggggttgtgggagagc 124980 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 38 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 97 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801 Query: 98 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 157 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 94802 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 94861 Query: 158 cgtgaaaacggggttgtgggagagc 182 || |||| ||||||||||||||||| Sbjct: 94862 cgcgaaagcggggttgtgggagagc 94886
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 373 bits (188), Expect = e-100 Identities = 191/192 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 102 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 182 caatacaagcgt 193 |||||||||||| Sbjct: 282 caatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 373 bits (188), Expect = e-100 Identities = 191/192 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 102 cggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 221 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 281 Query: 182 caatacaagcgt 193 |||||||||||| Sbjct: 282 caatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 371 bits (187), Expect = 2e-99 Identities = 258/279 (92%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 177135 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 177193 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 177194 gagaaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcc 177253 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 177254 cgtagtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagag 177313 Query: 182 caatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaa 240 |||||||||||| |||| |||||||||||| | || ||| |||||||||||||| ||| Sbjct: 177314 caatacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 177373 Query: 241 gtccagtagccgaaagcatcactagcttatgctctgacc 279 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 177374 gtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 264 bits (133), Expect = 3e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 177465 -----ggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 177518 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177519 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 177577 Query: 644 g 644 | Sbjct: 177578 g 177578 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagc 93 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagc 93 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 361 bits (182), Expect = 2e-96 Identities = 524/625 (83%), Gaps = 21/625 (3%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| |||||| |||| | |||||| |||| ||||| Sbjct: 104 cggagattcccgaataggtaaaccttt--aactgc-tgcttattccatg-gcagacaaga 159 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 160 ga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcc 218 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 181 | |||||| ||| | |||| |||| ||||||||| || |||| ||||||| || || Sbjct: 219 catagtagtggcaaatgaaaagggaacagcctaaatcgctaaaatggggttgggg---ag 275 Query: 182 caatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 241 ||||| ||| || || |||||| || || || |||| | | ||||||||||| | || Sbjct: 276 caataaaagtattttgttgctagacggagtagtggagttctgaaccctagatggtgagag 335 Query: 242 tccagtagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtgg 300 |||||||| |||| |||| ||||||||||| | | ||||||||||||||| || ||| Sbjct: 336 tccagtagtataaagtatcattagcttatgcttttaacccgagtagcatgggacatatgg 395 Query: 301 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 360 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 396 aatcccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaata 455 Query: 361 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 420 | |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| Sbjct: 456 gtgaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaaca 515 Query: 421 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 480 ||||| | | ||| ||||||||||||||| || || | |||||||| |||||| | Sbjct: 516 tgaaaac---atatgctaccaagcagtgggaggagacaggg--ctctgaccacgtgcccg 570 Query: 481 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 |||||||||||| |||||||||||| | |||||| ||||||||| |||| ||||| | Sbjct: 571 ttgaagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccacc-g 624 Query: 541 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 600 ||||| |||||||||| |||||| |||||| | ||||| ||||| |||||||||| | | Sbjct: 625 gagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaa-ctt 683 Query: 601 gggtgatctatccatgaccaggatg 625 |||||||||| |||||||||||||| Sbjct: 684 gggtgatctaaccatgaccaggatg 708
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 361 bits (182), Expect = 2e-96 Identities = 344/392 (87%), Gaps = 12/392 (3%) Strand = Plus / Plus Query: 253 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 312 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 313 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 372 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 373 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 432 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 433 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 492 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 493 ccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcga 552 ||||||||||||| | |||||| ||||||||| |||| ||||| |||||| |||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccacc-ggagccatagcga 661 Query: 553 aagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatc 612 |||| |||||| ||||||| | ||||| |||||||| ||||||| | ||||||||||| | Sbjct: 662 aagcaagtcttcatagggcaaatgtcattgcttatgtacccgaa-cttgggtgatctaac 720 Query: 613 catgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||| |||| |||||||||| Sbjct: 721 catgaccaggatgaaatttggttgaaactaag 752 Score = 133 bits (67), Expect = 8e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 52 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 111 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 112 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 171 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 172 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 231 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 232 a 232 | Sbjct: 325 a 325
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 223 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 282 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 283 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 342 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 343 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 402 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 403 gggtagtgaaatagaacgtgaaaccgt 429 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 345 bits (174), Expect = 1e-91 Identities = 319/364 (87%), Gaps = 10/364 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 517 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 518 gttaagggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgt 577 ||||||| | |||| |||||| ||||||||||||||||||||||||||| ||| Sbjct: 615 gttaaggtacaaaaacc-----ggagccatagcgaaagcgagtcttaatagggcga-tgt 668 Query: 578 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 637 ||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | ||| Sbjct: 669 cactgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtga 727 Query: 638 aact 641 |||| Sbjct: 728 aact 731 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 208 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 209 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 345 bits (174), Expect = 1e-91 Identities = 319/364 (87%), Gaps = 10/364 (2%) Strand = Plus / Minus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 517 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 518 gttaagggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgt 577 ||||||| | |||| |||||| ||||||||||||||||||||||||||| ||| Sbjct: 115047 gttaaggtacaaaaacc-----ggagccatagcgaaagcgagtcttaatagggcga-tgt 114994 Query: 578 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 637 ||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | ||| Sbjct: 114993 cactgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtga 114935 Query: 638 aact 641 |||| Sbjct: 114934 aact 114931 Score = 345 bits (174), Expect = 1e-91 Identities = 319/364 (87%), Gaps = 10/364 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 517 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 518 gttaagggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgt 577 ||||||| | |||| |||||| ||||||||||||||||||||||||||| ||| Sbjct: 86941 gttaaggtacaaaaacc-----ggagccatagcgaaagcgagtcttaatagggcga-tgt 86994 Query: 578 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 637 ||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | ||| Sbjct: 86995 cactgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtga 87053 Query: 638 aact 641 |||| Sbjct: 87054 aact 87057 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 115455 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115454 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 86533 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86534 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 341 bits (172), Expect = 2e-90 Identities = 363/422 (86%), Gaps = 6/422 (1%) Strand = Plus / Plus Query: 223 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 282 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 283 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 342 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 343 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 402 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 403 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 462 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 463 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 522 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 523 gggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 582 ||||| | ||||| |||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccacc-ggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 583 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 642 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||| Sbjct: 4725 tctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaacta 4783 Query: 643 ag 644 || Sbjct: 4784 ag 4785 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4193 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 4252 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 156 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 4253 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 341 bits (172), Expect = 2e-90 Identities = 363/422 (86%), Gaps = 6/422 (1%) Strand = Plus / Plus Query: 223 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 282 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 283 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 342 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 343 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 402 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 403 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 462 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 463 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 522 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 523 gggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 582 ||||| | ||||| |||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccacc-ggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 583 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 642 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||| Sbjct: 692 tctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaacta 750 Query: 643 ag 644 || Sbjct: 751 ag 752 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 156 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 341 bits (172), Expect = 2e-90 Identities = 363/422 (86%), Gaps = 6/422 (1%) Strand = Plus / Plus Query: 223 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 282 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 283 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 342 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 343 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 402 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 403 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 462 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 463 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 522 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 523 gggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 582 ||||| | ||||| |||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccacc-ggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 583 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 642 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||| Sbjct: 692 tctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaacta 750 Query: 643 ag 644 || Sbjct: 751 ag 752 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 156 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 319 bits (161), Expect = 6e-84 Identities = 226/247 (91%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 517 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 518 gttaagg 524 ||||||| Sbjct: 733 gttaagg 739 Score = 186 bits (94), Expect = 6e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||| ||| |||||| ||||| || |||||||||||||| || | |||||||| Sbjct: 209 cggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaaga 268 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 328 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 | ||||| |||||||||||||||| |||||||||||| Sbjct: 329 ctgagtagtggcgagcgaaatgggaacagcctaaaccg 366 Score = 125 bits (63), Expect = 2e-25 Identities = 91/99 (91%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 749 ggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaaccc 808 Query: 600 tgggtgatctatccatgaccaggatgaagcttggatgaa 638 |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 809 -gggtgatctaaccatggccagggtgaagcttgggtgaa 846
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 319 bits (161), Expect = 6e-84 Identities = 167/169 (98%) Strand = Plus / Minus Query: 372 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 431 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 432 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 491 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 492 gccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 540 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 107882
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 309 bits (156), Expect = 6e-81 Identities = 248/274 (90%), Gaps = 11/274 (4%) Strand = Plus / Plus Query: 371 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 430 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 431 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 490 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 491 agccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagccgtagc 550 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaag-----ggaacccacc-ggagccgtagc 170 Query: 551 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 610 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 171 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 229 Query: 611 tccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||| |||||||||| Sbjct: 230 tccatgaccaggatgaagcttgggtgaaactaag 263
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 297 bits (150), Expect = 2e-77 Identities = 305/352 (86%), Gaps = 11/352 (3%) Strand = Plus / Plus Query: 282 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 341 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 342 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 401 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 402 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 461 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 462 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 521 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 522 agggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcact 581 || |||| ||||| | |||| |||||||||| |||||| ||||||||||||||| Sbjct: 622 ag-----ggaatccacc-gaagccatagcgaaagcaagtctt-tcagggcgattgtcact 674 Query: 582 gcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 633 | |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 675 gtttatggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgg 725 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 ||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgat 221 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 178 |||| ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 222 tccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 231 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 289 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 290 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 349 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 350 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 409 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 410 gaaatagaacgtgaaaccgtgctgagctcc 439 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 231 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 289 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 290 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 349 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 350 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 409 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 410 gaaatagaacgtgaaaccgtgctgagctcc 439 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 231 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 289 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 290 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 349 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 350 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 409 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 410 gaaatagaacgtgaaaccgtgctgagctcc 439 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 432 tgagctcccaagcagtgggaggggaaagtgatc 464 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 546 gtagcgaaagcgagtcttaatagggcgattgtcactgctta 586 ||||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9056636 gtagcgaaagcgactcttaataggacaattttcactactta 9056676
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 231 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 289 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 290 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 349 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 350 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 409 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 410 gaaatagaacgtgaaaccgtgctgagctcc 439 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 432 tgagctcccaagcagtgggaggggaaagtgatc 464 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 546 gtagcgaaagcgagtcttaatagggcgattgtcactgctta 586 ||||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9128333 gtagcgaaagcgactcttaataggacaattttcactactta 9128373
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 277 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 336 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 337 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 517 ggttaag 523 ||||||| Sbjct: 574 ggttaag 580 Score = 161 bits (81), Expect = 3e-36 Identities = 139/157 (88%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||| ||| |||||| ||||| |||||||| |||||||| || |||| | ||| Sbjct: 60 cggagatccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgaga 118 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 178 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaacc 158 | ||||| |||||||||||||||| ||||||||||| Sbjct: 179 ctcagtagtggcgagcgaaatgggaacagcctaaacc 215 Score = 69.9 bits (35), Expect = 1e-08 Identities = 85/99 (85%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 ||||||||||||||||| |||| || | || || |||||||| |||| ||||||||||| Sbjct: 589 ggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactgtttatagacccgaaccc 647 Query: 600 tgggtgatctatccatgaccaggatgaagcttggatgaa 638 |||||||||||||||| ||||| |||| ||||| |||| Sbjct: 648 -gggtgatctatccatggccagggtgaaacttgggtgaa 685
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 285 bits (144), Expect = 9e-74 Identities = 300/347 (86%), Gaps = 15/347 (4%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 517 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 518 gttaagggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggc---gat 574 |||||| | || || | |||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaag-----gaaattcatccggagccatagcgaaagcgagtctgaatagggcattaat 659 Query: 575 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 621 |||||| |||||||||||||| || || ||||||||||||| |||| Sbjct: 660 ggtcacttcttatggacccgaa-ccgggatgatctatccatggccag 705 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 118 ttcccgtagtagcggcgagcgaa 140 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 283 bits (143), Expect = 3e-73 Identities = 244/272 (89%), Gaps = 13/272 (4%) Strand = Plus / Plus Query: 373 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 432 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 433 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 492 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 493 ccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagccgtagcga 552 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaag-----ggaacccacc-ggagccgtagcga 168 Query: 553 aagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatc 612 ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 169 aagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatc 227 Query: 613 catgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||| |||||||||| Sbjct: 228 catgaccaggatgaagcttgggtgaaactaag 259
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 280 bits (141), Expect = 5e-72 Identities = 158/161 (98%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 484 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggag 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-ggag 60 Query: 544 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctggg 603 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 61 ccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctggg 119 Query: 604 tgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 tgatctatccatgaccaggatgaagcttggatgaaactaag 160
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 278 bits (140), Expect = 2e-71 Identities = 157/160 (98%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 485 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgggagc 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc-ggagc 59 Query: 545 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 60 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggt 118 Query: 605 gatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gatctatccatgaccaggatgaagcttggatgaaactaag 158
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 276 bits (139), Expect = 9e-71 Identities = 164/171 (95%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 6 gattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 65 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| Sbjct: 79662 gattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagaca 79604 Query: 66 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79603 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 79544 Query: 126 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 176 ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79543 gtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 517 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 518 gttaagg 524 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 157 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 264 bits (133), Expect = 3e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 122 -----ggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 175 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 176 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 234 Query: 644 g 644 | Sbjct: 235 g 235
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 264 bits (133), Expect = 3e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106 -----ggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 159 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 160 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 218 Query: 644 g 644 | Sbjct: 219 g 219
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 272 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 331 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 332 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 391 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 392 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 451 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 452 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 511 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 512 ggcttggttaagg 524 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 65 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 125 agtagcggcgagcgaaatgggagcagcctaaacc 158 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 93.7 bits (47), Expect = 7e-16 Identities = 87/99 (87%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||| |||||||||| |||| || | ||||| |||||||| |||||||||||||||| | Sbjct: 597 agccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaaccc-g 655 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaaac 640 ||||||||||||||| ||||||||||| |||| |||||| Sbjct: 656 ggtgatctatccatggccaggatgaagtttgggtgaaac 694
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 252 bits (127), Expect = 1e-63 Identities = 225/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 271 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 330 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 331 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 390 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 391 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 450 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 451 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 510 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 511 tggcttggttaagggaa 527 ||||| ||||||||||| Sbjct: 617 tggctgggttaagggaa 633 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 220 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 156 || || ||||||||||||||||||||||| |||||||| Sbjct: 221 tttcctgagtagcggcgagcgaaatgggagaagcctaaa 259 Score = 105 bits (53), Expect = 2e-19 Identities = 93/105 (88%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||| |||||| ||||| |||||||||| ||||||||||||||| Sbjct: 644 ggagccatagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaaccc 703 Query: 600 tgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 |||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 704 -gggtgatctaaccatggccaggatgaagcttgggtgaaactaag 747
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 250 bits (126), Expect = 5e-63 Identities = 129/130 (99%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 75870 cggagattcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaaga 75929 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75930 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 75989 Query: 122 cgtagtagcg 131 |||||||||| Sbjct: 75990 cgtagtagcg 75999 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 398 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ggcgaactgaaacatcttag 89 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 248 bits (125), Expect = 2e-62 Identities = 215/239 (89%), Gaps = 12/239 (5%) Strand = Plus / Plus Query: 407 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 466 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 526 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 364802 Query: 527 acggaacccaccgggagccgtagcgaaa-gcgagtcttaatagggcgattgtcactgctt 585 |||||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||| Sbjct: 364803 --ggaacccacc-ggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctt 364859 Query: 586 atggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 644 ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364860 atggacccgaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 352 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 517 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 518 gttaagg 524 ||||||| Sbjct: 611 gttaagg 617 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 36 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 96 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 155 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 156 accg 159 |||| Sbjct: 246 accg 249 Score = 81.8 bits (41), Expect = 3e-12 Identities = 81/93 (87%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 607 ||||||||||||||| ||||||||| ||||||| ||| ||||||||||| ||||||| Sbjct: 635 agcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaaccc-gggtgat 693 Query: 608 ctatccatgaccaggatgaagcttggatgaaac 640 ||| ||||| |||||| ||||||||| |||||| Sbjct: 694 ctaaccatggccaggaggaagcttgggtgaaac 726
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 206 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 265 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 266 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 325 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 326 accttgcaaggctaaatactcctgggtgaccga 358 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 91.7 bits (46), Expect = 3e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 710 -gggtgatctaaccatggccaggatgaagcttgg 742
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 91.7 bits (46), Expect = 3e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 2479 -gggtgatctaaccatggccaggatgaagcttgg 2511
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 396 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 517 ggttaaggg 525 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 64 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 123 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 124 tagtagcggcgagcgaaatgggagcagcctaaac 157 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157 Score = 65.9 bits (33), Expect = 2e-07 Identities = 76/88 (86%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaaccctgggtg 605 ||||||||| ||||| |||||||| | | |||||| ||| |||||||||||| ||||| Sbjct: 616 agcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaaccc-gggtg 674 Query: 606 atctatccatgaccaggatgaagcttgg 633 ||||| ||||| |||||||||||||||| Sbjct: 675 atctaaccatggccaggatgaagcttgg 702
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 236 bits (119), Expect = 7e-59 Identities = 217/249 (87%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 277 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 336 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 337 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 517 ggttaaggg 525 ||||||||| Sbjct: 1021 ggttaaggg 1029 Score = 165 bits (83), Expect = 2e-37 Identities = 141/159 (88%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | |||| Sbjct: 506 cggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaaga 564 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 |||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 565 gacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcc 624 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgt 160 | |||||| ||||||||||| |||| ||||||||||||| Sbjct: 625 cttagtagtggcgagcgaaacgggaacagcctaaaccgt 663 Score = 97.6 bits (49), Expect = 4e-17 Identities = 86/97 (88%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 542 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctg 601 |||||||||||||||||||| | |||||| |||||||| |||||||||||||||| | Sbjct: 1038 agccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaaccc-g 1096 Query: 602 ggtgatctatccatgaccaggatgaagcttggatgaa 638 ||||||||||||||| ||||| |||||||||| |||| Sbjct: 1097 ggtgatctatccatggccagggtgaagcttgggtgaa 1133
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 225 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 284 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 285 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 344 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 345 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 404 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 405 gtagtgaaatagaacgtgaaa 425 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 143 bits (72), Expect = 8e-31 Identities = 157/181 (86%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 524 ggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 583 || ||||| ||||| || | |||||||||| |||||| ||||||| | ||||| ||| Sbjct: 626 gg----gaacc-accgg-agtcatagcgaaagcaagtcttcatagggcaaatgtcattgc 679 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 643 ||||||||||||| | ||||||||||| ||||||||| |||||| |||| ||||||||| Sbjct: 680 ttatggacccgaa-cttgggtgatctaaccatgaccaagatgaaatttggttgaaactaa 738 Query: 644 g 644 | Sbjct: 739 g 739 Score = 119 bits (60), Expect = 1e-23 Identities = 147/172 (85%), Gaps = 3/172 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| |||| ||| | Sbjct: 103 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gcagacaaaa 160 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || ||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||| | Sbjct: 161 ga-aacctggtgaactgaatcatcttagtagacagaggaaaataaagcaaaagttattac 219 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 173 | |||||| |||||| |||| |||| |||||||||||| |||| ||||||| Sbjct: 220 catagtagtggcgagtgaaaagggaacagcctaaaccgctaaaatggggttg 271
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 420 gtgaaa 425 ||||| Sbjct: 503 atgaaa 508 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 524 gg 525 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggag 147 | |||||| ||||| ||||| ||||| Sbjct: 221 catagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 420 gtgaaa 425 ||||| Sbjct: 503 atgaaa 508 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 524 gg 525 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 115 bits (58), Expect = 2e-22 Identities = 133/154 (86%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| |||||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggcgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 132/154 (85%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaa 155 | |||||| ||||| ||||| |||| || ||||| Sbjct: 221 catagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 455 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 456 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 516 tggttaagg 524 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 576 gtcactgcttatggacccgaaccctgggtgatctatccatgaccag 621 |||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaaccc-gggtgatctaatcatgaccag 727
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 455 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 456 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 516 tggttaagg 524 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 576 gtcactgcttatggacccgaaccctgggtgatctatccatgaccag 621 |||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaaccc-gggtgatctaatcatgaccag 727
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 458 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 118 ttcccgtagtagcggcgagcgaaatggga 146 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236 Score = 50.1 bits (25), Expect = 0.009 Identities = 47/53 (88%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 576 gtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaag 628 |||||| |||||||||||||| ||||| ||||||| |||||| || ||||||| Sbjct: 806 gtcacttcttatggacccgaa-cctggatgatctaaccatgagcatgatgaag 857
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccg 428 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 54 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 113 |||||||||| |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 114 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgact 501 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 44.1 bits (22), Expect = 0.56 Identities = 71/85 (83%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtg 605 ||||||||||||||| |||||||| | |||| | |||| |||||||||||| || | Sbjct: 873 agcgaaagcgagtctgaatagggcatataagtcatttcttacggacccgaaccc-ggtcg 931 Query: 606 atctatccatgaccaggatgaagct 630 ||||| ||||| ||||||||||||| Sbjct: 932 atctaaccatgtccaggatgaagct 956
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 240 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 299 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 300 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 359 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 360 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 419 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 420 gtgaaa 425 ||||| Sbjct: 504 atgaaa 509 Score = 107 bits (54), Expect = 5e-20 Identities = 126/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||| Sbjct: 104 cggagattcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaaga 161 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 || |||| || ||||||||||||||||||| ||||||||||| |||||||||| ||||| Sbjct: 162 ga-aacccggtgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcc 220 Query: 122 cgtagtagcggcgagcgaaatgggag 147 | |||||| ||||| ||||| ||||| Sbjct: 221 catagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 523 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 524 gg 525 || Sbjct: 602 gg 603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 54 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 113 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 114 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgact 501 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930 Score = 46.1 bits (23), Expect = 0.14 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 583 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 633 |||| |||||||||||| || |||||| ||||| |||||||||||||||| Sbjct: 1030 cttacggacccgaaccc-ggtcgatctaaccatgtccaggatgaagcttgg 1079
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 7e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 77 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 136 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 137 cgaaatgggagcagcctaaacc 158 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 465 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 587 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 633 ||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 712 tggacccgaaccc-gggtgatctaatcatgaccaggatgaagcttgg 757 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 549 gcgaaagcgagtcttaatagggcga 573 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 7e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 455 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 456 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 513 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/77 (88%), Gaps = 4/77 (5%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| |||||||||||||||| |||| Sbjct: 696 agcgaaagcgagtctgaatagggcgcttatagtcactttttatggacccgaaccc-gggt 754 Query: 605 gatctatccatgaccag 621 ||||||| ||||||||| Sbjct: 755 gatctattcatgaccag 771
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 396 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 517 ggttaagg 524 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 65.9 bits (33), Expect = 2e-07 Identities = 76/88 (86%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccgaaccctgggtg 605 ||||||||| ||||| ||||||||| || ||||| ||||||||||||||||| ||||| Sbjct: 701 agcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccgaaccc-gggtg 759 Query: 606 atctatccatgaccaggatgaagcttgg 633 ||||| | |||||||||||||| |||| Sbjct: 760 atctaatcctgaccaggatgaagtttgg 787
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 277 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 336 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 337 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 397 cc 398 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 56 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 115 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 116 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 468 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 58.0 bits (29), Expect = 4e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 575 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagctt 631 |||||||| ||||||||||||| || | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatcc-gagtgatctaaccatgaccagggtgaagctt 719
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 202 bits (102), Expect = 1e-48 Identities = 165/182 (90%), Gaps = 8/182 (4%) Strand = Plus / Plus Query: 464 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 522 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 523 gggaacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 582 | |||||||||| |||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 80 g-----ggaacccacc-ggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 133 Query: 583 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 642 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134 cttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 192 Query: 643 ag 644 || Sbjct: 193 ag 194
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 282 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 341 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 342 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 401 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 402 tgggtagtgaaatagaacgtgaaacc 427 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 1929 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 1988 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 178 |||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1989 tcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 396 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 397 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 455 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 456 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 516 tggttaagg 524 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 396 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 397 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 455 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 456 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 516 tggttaagg 524 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 73.8 bits (37), Expect = 6e-10 Identities = 77/88 (87%), Gaps = 3/88 (3%) Strand = Plus / Minus Query: 548 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaaccctgggtg 605 ||||||||||||||| ||||||||||| |||||| |||||||||||||| ||||| || Sbjct: 155576 agcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccgaa-cctggatg 155518 Query: 606 atctatccatgaccaggatgaagcttgg 633 ||||| |||| ||||| |||||||||| Sbjct: 155517 atctaatcatggccaggttgaagcttgg 155490 Score = 73.8 bits (37), Expect = 6e-10 Identities = 77/88 (87%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaaccctgggtg 605 ||||||||||||||| ||||||||||| |||||| |||||||||||||| ||||| || Sbjct: 78316 agcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccgaa-cctggatg 78374 Query: 606 atctatccatgaccaggatgaagcttgg 633 ||||| |||| ||||| |||||||||| Sbjct: 78375 atctaatcatggccaggttgaagcttgg 78402
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 338 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 454 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 455 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 515 tt 516 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 77 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 136 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 137 cgaa 140 |||| Sbjct: 238 cgaa 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 549 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 606 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 725 Query: 607 tctatccatgaccaggatgaagcttgg 633 |||| ||||||||||||||||||||| Sbjct: 726 tctaatcatgaccaggatgaagcttgg 752
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 77 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 136 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 137 cgaaatgggagcagcctaaacc 158 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 576 gtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaa 627 |||||| ||||||||||||||||| |||||||||| |||| |||||||||| Sbjct: 856 gtcacttcttatggacccgaaccc-gggtgatctaatcatggccaggatgaa 906
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 133 cgagcgaaatgggagcagcctaaac 157 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 101 bits (51), Expect = 3e-18 Identities = 80/87 (91%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaaccctgggtga 606 ||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||| |||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaaccc-gggtga 716 Query: 607 tctatccatgaccaggatgaagcttgg 633 ||||| |||| |||||||||||||||| Sbjct: 717 tctattcatggccaggatgaagcttgg 743 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/89 (89%), Gaps = 4/89 (4%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 711 agcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 769 Query: 605 gatctatccatgaccaggatgaagcttgg 633 ||||||| |||| |||||||||||||||| Sbjct: 770 gatctattcatggccaggatgaagcttgg 798 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 77 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 136 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 137 cgaaatgggagcagcctaaacc 158 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 522 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/89 (84%), Gaps = 5/89 (5%) Strand = Plus / Plus Query: 549 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaaccctgggt 604 |||||||||||||| || |||||| |||||||| ||| ||||||||||||| ||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaaccc-aggt 731 Query: 605 gatctatccatgaccaggatgaagcttgg 633 |||||| |||||||||| |||||||||| Sbjct: 732 gatctaaccatgaccagattgaagcttgg 760
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 338 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 454 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 455 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 515 tt 516 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 77 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 136 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 137 cgaa 140 |||| Sbjct: 219 cgaa 222 Score = 71.9 bits (36), Expect = 2e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 549 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 606 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 706 Query: 607 tctatccatgaccaggatgaagcttgg 633 |||| ||||||||||||||||||||| Sbjct: 707 tctaatcatgaccaggatgaagcttgg 733
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/89 (89%), Gaps = 4/89 (4%) Strand = Plus / Minus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 151730 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaaccc-gggt 151672 Query: 605 gatctatccatgaccaggatgaagcttgg 633 ||||||| |||| |||||||||||||||| Sbjct: 151671 gatctattcatggccaggatgaagcttgg 151643 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/89 (89%), Gaps = 4/89 (4%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 42473 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaaccc-gggt 42531 Query: 605 gatctatccatgaccaggatgaagcttgg 633 ||||||| |||| |||||||||||||||| Sbjct: 42532 gatctattcatggccaggatgaagcttgg 42560 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 338 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 396 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 454 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 455 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 515 tt 516 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 77 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 136 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 137 cgaa 140 |||| Sbjct: 238 cgaa 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 549 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 606 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 725 Query: 607 tctatccatgaccaggatgaagcttgg 633 |||| ||||||||||||||||||||| Sbjct: 726 tctaatcatgaccaggatgaagcttgg 752
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/89 (89%), Gaps = 4/89 (4%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 711 agcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 769 Query: 605 gatctatccatgaccaggatgaagcttgg 633 ||||||| |||| |||||||||||||||| Sbjct: 770 gatctattcatggccaggatgaagcttgg 798 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 133 cgagcgaaatgggagcagcctaaac 157 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 101 bits (51), Expect = 3e-18 Identities = 80/87 (91%), Gaps = 2/87 (2%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaaccctgggtga 606 ||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||| |||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaaccc-gggtga 716 Query: 607 tctatccatgaccaggatgaagcttgg 633 ||||| |||| |||||||||||||||| Sbjct: 717 tctattcatggccaggatgaagcttgg 743 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 515 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/89 (89%), Gaps = 4/89 (4%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 645 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaaccc-gggt 703 Query: 605 gatctatccatgaccaggatgaagcttgg 633 ||||||| |||| |||||||||||||||| Sbjct: 704 gatctattcatggccaggatgaagcttgg 732 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 73.8 bits (37), Expect = 6e-10 Identities = 77/87 (88%), Gaps = 5/87 (5%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 730 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaaccc-gggt 788 Query: 605 gatctatccatgaccaggatgaagctt 631 ||||||| |||| || ||||||||||| Sbjct: 789 gatctattcatggcc-ggatgaagctt 814
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 281 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 340 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 341 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 400 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 401 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 460 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 461 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 509 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 69.9 bits (35), Expect = 1e-08 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 551 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 610 |||| ||||||| || |||||||| ||| || |||| |||||||||||||| ||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctgg-tgatcta 320 Query: 611 tccatgaccaggatgaagcttgg 633 ||||| |||||||||||||||| Sbjct: 321 accatggccaggatgaagcttgg 343
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 398 ccagtgggtagtgaaatagaacgtgaaacc 427 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgact 501 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 65.9 bits (33), Expect = 2e-07 Identities = 82/96 (85%), Gaps = 3/96 (3%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaac 597 ||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||||| Sbjct: 623 ggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccgaac 682 Query: 598 cctgggtgatctatccatgaccaggatgaagcttgg 633 || |||||||||| |||||||||||||||||||||| Sbjct: 683 cc-gggtgatctaaccatgaccaggatgaagcttgg 717
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 386 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 445 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 446 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 495 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 282 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 341 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 342 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 401 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 402 tgggtagtgaaatagaacgtgaaacc 427 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 178 bits (90), Expect = 1e-41 Identities = 156/174 (89%), Gaps = 8/174 (4%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 526 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 527 acggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 586 | |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 627 at-----ccaccga-agccatagcgaaagcaagtctttc-agggcgattgtcactgttta 679 Query: 587 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 640 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 680 tggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgggtgaaac 732 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 221 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 178 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 222 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 281 Query: 179 ga 180 || Sbjct: 282 ga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 282 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 341 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 342 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 401 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 402 tgggtagtgaaatagaacgtgaaacc 427 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 178 bits (90), Expect = 1e-41 Identities = 156/174 (89%), Gaps = 8/174 (4%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 526 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 527 acggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 586 | |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 3661 at-----ccaccga-agccatagcgaaagcaagtctttc-agggcgattgtcactgttta 3713 Query: 587 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 640 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 3714 tggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgggtgaaac 3766 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 3196 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 3255 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 178 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 3256 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 3315 Query: 179 ga 180 || Sbjct: 3316 ga 3317
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 398 ccagtgggtagtgaaatagaacgtgaaacc 427 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgact 501 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 65.9 bits (33), Expect = 2e-07 Identities = 82/96 (85%), Gaps = 3/96 (3%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaac 597 ||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||||| Sbjct: 25432 ggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccgaac 25491 Query: 598 cctgggtgatctatccatgaccaggatgaagcttgg 633 || |||||||||| |||||||||||||||||||||| Sbjct: 25492 cc-gggtgatctaaccatgaccaggatgaagcttgg 25526
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 281 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 340 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 341 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 400 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 401 gtgggtagtgaaatagaacgtgaaaccgt 429 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 69.9 bits (35), Expect = 1e-08 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 551 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 610 |||| ||||||| |||||||||| ||||| |||| ||||||||||| |||||||||| Sbjct: 262 gaaaccgagtctgaatagggcgaaagtcacattttatagacccgaaccc-gggtgatcta 320 Query: 611 tccatgaccaggatgaagcttgg 633 ||||| |||||||||||||||| Sbjct: 321 accatgtccaggatgaagcttgg 343 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 474 gtgcctgttgaagaatgagccggcgactcatagg 507 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 1e-45 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 396 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 456 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 501 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 101 bits (51), Expect = 3e-18 Identities = 81/89 (91%), Gaps = 4/89 (4%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||| ||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 654 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaaccc-gggt 712 Query: 605 gatctatccatgaccaggatgaagcttgg 633 ||||||| ||||||||||||||||||||| Sbjct: 713 gatctattcatgaccaggatgaagcttgg 741 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 457 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 458 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 517 ggttaagg 524 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 158 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 85.7 bits (43), Expect = 2e-13 Identities = 86/99 (86%), Gaps = 6/99 (6%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccg 594 |||||| ||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct: 818 ggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacccg 877 Query: 595 aaccctgggtgatctatccatgaccaggatgaagcttgg 633 ||||| |||||||||| ||||||||||||||||||||| Sbjct: 878 aaccc-gggtgatctaatcatgaccaggatgaagcttgg 915
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 101 bits (51), Expect = 3e-18 Identities = 85/94 (90%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 542 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccc 599 |||| |||||||||||||||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| |||||||||||||||||||||| Sbjct: 716 -gggtgatctaaccatgaccaggatgaagcttgg 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 525 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 453 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 453 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 67.9 bits (34), Expect = 4e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 548 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 607 ||||||||||||||| | ||||| ||||||| | || ||||||||||| ||||||| Sbjct: 170864 agcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaaccc-gggtgat 170806 Query: 608 ctatccatgaccaggatgaagcttgg 633 ||| |||||||||||||||||||||| Sbjct: 170805 ctaaccatgaccaggatgaagcttgg 170780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 607 ||||||||||||||| | ||||| ||||||| | || ||||||||||| ||||||| Sbjct: 122062 agcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaaccc-gggtgat 122120 Query: 608 ctatccatgaccaggatgaagcttgg 633 ||| |||||||||||||||||||||| Sbjct: 122121 ctaaccatgaccaggatgaagcttgg 122146
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 453 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 59 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 118 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 119 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 67.9 bits (34), Expect = 4e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 607 ||||||||||||||| | ||||| ||||||| | || ||||||||||| ||||||| Sbjct: 653 agcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaaccc-gggtgat 711 Query: 608 ctatccatgaccaggatgaagcttgg 633 ||| |||||||||||||||||||||| Sbjct: 712 ctaaccatgaccaggatgaagcttgg 737
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 396 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 397 cccagtgggtagtgaaatagaacgtgaaaccgt 429 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 137 bits (69), Expect = 5e-29 Identities = 149/170 (87%), Gaps = 8/170 (4%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 525 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaa-gg 687 Query: 526 aacggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgc 583 | ||| | |||| |||| ||||||||| |||||||||||||||||| |||||| Sbjct: 688 a---gaatcatccgg-agccagagcgaaagcaagtcttaatagggcgattttgtcacttt 743 Query: 584 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 744 ttatggacccgaaccc-gggtgatctaaccatgaccaggatgaagcttgg 792 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 1e-42 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 396 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 397 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 453 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 454 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 507 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 131 ggcgagcgaaatgggagcagcctaaac 157 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 78/88 (88%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaaccctgggtg 605 ||||||||||||||| ||||||||| | ||||| | |||||||||||||||| ||| || Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacc-tggatg 701 Query: 606 atctatccatgaccaggatgaagcttgg 633 ||||| ||||| |||||||||||||||| Sbjct: 702 atctaaccatggccaggatgaagcttgg 729
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgt 429 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 5 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 64 |||||||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||| Sbjct: 95 agattcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagac 154 Query: 65 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 124 |||| |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| | Sbjct: 155 aacccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattccctt 214 Query: 125 agtagcggcgagcgaaatgggagcagcctaaaccg 159 ||||| ||||||||||| |||| ||| |||||||| Sbjct: 215 agtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 465 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 7e-19 Identities = 77/84 (91%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 607 ||||||||| ||||| ||||||||| |||| |||||||||||||||||||| ||||||| Sbjct: 633 agcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaaccc-gggtgat 691 Query: 608 ctatccatgaccaggatgaagctt 631 ||| |||||||||||||||||||| Sbjct: 692 ctaaccatgaccaggatgaagctt 715
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 398 ccagtgggtagtgaaatagaacgtgaaacc 427 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/87 (90%), Gaps = 4/87 (4%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 717 Query: 605 gatctatccatgaccaggatgaagctt 631 ||||||| |||||||||| |||||||| Sbjct: 718 gatctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 133 cgagcgaaatgggagcagcctaaacc 158 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 398 ccagtgggtagtgaaatagaacgtgaaacc 427 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 133 cgagcgaaatgggagcagcctaaacc 158 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 43/45 (95%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 589 gacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 633 ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 547 gacccgaaccc-gggtgatctaaccatgaccaggatgaagcttgg 590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgact 501 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 398 ccagtgggtagtgaaatagaacgtgaaacc 427 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/87 (90%), Gaps = 4/87 (4%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 604 ||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 717 Query: 605 gatctatccatgaccaggatgaagctt 631 ||||||| |||||||||| |||||||| Sbjct: 718 gatctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 466 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 524 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 73 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 132 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 133 cgagcgaaatgggagcagcctaaacc 158 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 456 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 457 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 516 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 517 ggttaa 522 |||||| Sbjct: 731 ggttaa 736 Score = 105 bits (53), Expect = 2e-19 Identities = 132/157 (84%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 2 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 61 ||||||||||| |||||| |||||||||| ||| ||| ||||| ||| ||| |||| Sbjct: 205 cggagattcccgaatagggcaaccttttatactacctattgaattcatagataggaaaga 264 Query: 62 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 121 ||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 265 gacaacccagtgaag-gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcc 323 Query: 122 cgtagtagcggcgagcgaaatgggagcagcctaaacc 158 | ||||||||||||||||||| | ||||||||||| Sbjct: 324 cttagtagcggcgagcgaaatcccaacagcctaaacc 360 Score = 61.9 bits (31), Expect = 2e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 575 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 633 ||||||| ||||| |||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 786 tgtcacttcttatccacccgaaccc-gggtgatctaaccatggccaggatgaagcttgg 843
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 281 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 340 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 341 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 400 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 401 gtgggtagtgaaatagaacgtgaaaccgt 429 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 83.8 bits (42), Expect = 7e-13 Identities = 76/86 (88%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 548 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 607 |||||||||||||| |||||||||||| ||||| || | ||||||||||| ||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaaccc-gggtgat 320 Query: 608 ctatccatgaccaggatgaagcttgg 633 ||| ||||| |||||||||||||||| Sbjct: 321 ctaaccatgtccaggatgaagcttgg 346 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 465 tctgaccgcgtgcctgttgaagaatgagccggcga 499 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 398 ccagt-gggtagtgaaatagaacgtgaaaccgt 429 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 58 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 118 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 159 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 113 bits (57), Expect = 7e-22 Identities = 139/165 (84%), Gaps = 6/165 (3%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 526 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 527 acggaacccaccgggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 586 | | || |||||| ||||||||| |||||||||||||| |||||| ||| Sbjct: 774 aaaaatcc-----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactcttta 828 Query: 587 tggacccgaaccctgggtgatctatccatgaccaggatgaagctt 631 ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 829 tggacccgaaccc-gggtgatctaaccatgaccaggatgaagctt 872
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 532 -gggtgatctaaccatggccaggatgaagcttgg 564 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 131 ggcgagcgaaatgggagcagcctaaacc 158 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 507 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 532 -gggtgatctaaccatggccaggatgaagcttgg 564 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 131 ggcgagcgaaatgggagcagcctaaacc 158 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 507 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 5e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 74 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 133 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 134 gagcgaaatgggagcagcctaaacc 158 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 5e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 131 ggcgagcgaaatgggagcagcctaaacc 158 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 532 -gggtgatctaaccatggccaggatgaagcttgg 564 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 131 ggcgagcgaaatgggagcagcctaaacc 158 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 507 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 5e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 131 ggcgagcgaaatgggagcagcctaaacc 158 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 5e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 131 ggcgagcgaaatgggagcagcctaaacc 158 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 278 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 337 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 338 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 397 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 398 ccagtgggtagtgaaatagaacgtgaaaccgtg 430 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 107 bits (54), Expect = 5e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 540 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 599 |||||| |||||||||||||||| ||||||||| |||||| || |||| ||||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 600 tgggtgatctatccatgaccaggatgaagcttgg 633 |||||||||| ||||| |||||||||||||||| Sbjct: 545 -gggtgatctaaccatggccaggatgaagcttgg 577 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 71 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 131 ggcgagcgaaatgggagcagcctaaacc 158 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 467 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 514 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,312,218 Number of Sequences: 3902068 Number of extensions: 4312218 Number of successful extensions: 128423 Number of sequences better than 10.0: 26596 Number of HSP's better than 10.0 without gapping: 26425 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 80800 Number of HSP's gapped (non-prelim): 45173 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
