Clone Name | basd2o08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KPRS4_ORYSA (Q6ZFT5) Ribose-phosphate pyrophosphokinase 4 (EC 2.... | 30 | 7.0 |
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>KPRS4_ORYSA (Q6ZFT5) Ribose-phosphate pyrophosphokinase 4 (EC 2.7.6.1)| (Phosphoribosyl pyrophosphate synthetase 4) Length = 325 Score = 29.6 bits (65), Expect = 7.0 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +1 Query: 301 KRLSAAP*MAKVQ*PKASLAYALTPSSMGHVESRVNQQGPPCKAKYSWVTDSESSTVRER 480 +++ AA AKV A + +A+ P + N G K Y W+TDS TV+ Sbjct: 248 QKVLAAHGAAKVS---AYVTHAVFPKQSYERFTHTNSAGSADKFAYFWITDSCPQTVKAI 304 Query: 481 *KEPP 495 ++PP Sbjct: 305 NQQPP 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,356,558 Number of Sequences: 219361 Number of extensions: 1630486 Number of successful extensions: 3392 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 3302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3392 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)