ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2o07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 753 0.0
2gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 642 0.0
3ref|XM_469800.1| Oryza sativa (japonica cultivar-group), mRNA 450 e-123
4dbj|AK101584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 450 e-123
5gb|BT017820.1| Zea mays clone EL01N0508A02.c mRNA sequence 295 1e-76
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 285 1e-73
7gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genom... 285 1e-73
8gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome... 285 1e-73
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 285 1e-73
10gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 248 2e-62
11gb|BC020144.1| Mus musculus desmoglein 2, mRNA (cDNA clone IMAGE... 44 0.61
12ref|NM_007883.1| Mus musculus desmoglein 2 (Dsg2), mRNA 44 0.61
13ref|NM_174656.2| Bos taurus solute carrier family 25 (mitochondr... 44 0.61
14gb|BC044848.1| Mus musculus desmoglein 2, mRNA (cDNA clone IMAGE... 44 0.61
15gb|AC132091.3| Mus musculus BAC clone RP24-465H15 from 18, compl... 44 0.61
16emb|X97773.1|BTMITRICP B.taurus mRNA for mitochondrial tricarbox... 44 0.61
17dbj|AB072269.1| Mus musculus mDSG2 mRNA for desmoglein 2, comple... 44 0.61
18gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
19emb|Z94044.2|HS154P24 Human DNA sequence from clone RP1-154P24 o... 42 2.4
20dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
21dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
22gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, comp... 42 2.4
23gb|AC012513.12| Homo sapiens BAC clone RP11-566E18 from 2, compl... 42 2.4
24gb|AC069155.6| Homo sapiens BAC clone RP11-737C8 from 2, complet... 42 2.4
25dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
26gb|AC008123.9|AC008123 Homo sapiens 2q35 BAC RPCI11-1064L18 (Ros... 42 2.4
27dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone... 42 2.4
28dbj|AP006180.2| Homo sapiens genomic DNA, chromosome 8p12, clone... 42 2.4
29gb|AY803117.1| Sus scrofa chromosome 17 clone pkmCon86, mRNA seq... 40 9.5
30gb|AY549596.1| Enterobacter sp. TERIPS12009 16S ribosomal RNA ge... 40 9.5
31gb|AC005817.8| Mus musculus strain 129/Sv clone ct7-581i11 map 1... 40 9.5
32gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome... 40 9.5
33gb|AC162922.4| Mus musculus BAC clone RP23-314M6 from chromosome... 40 9.5
34gb|AC003063.7| Mus musculus Chromosome 16 BAC Clone b40-o20 Synt... 40 9.5
35gb|AC129293.9| Mus musculus BAC clone RP24-535M14 from chromosom... 40 9.5
36gb|L76134.1|HUMCTPG Homo sapiens citrate transport protein gene,... 40 9.5
37gb|AC004463.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 79h1... 40 9.5
38gb|AC079043.27| Mus musculus strain C57BL/6J chromosome 16 clone... 40 9.5
39dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 9.5
40emb|X96924.1|HAMCTP H.sapiens gene encoding mitochondrial citrat... 40 9.5
41gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 9.5
42gb|L77569.1|HUMDGCRTEL Homo sapiens DiGeorge syndrome critical r... 40 9.5
43gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, compl... 40 9.5
44gb|AC087064.27| Mus musculus strain C57BL/6J chromosome 16 clone... 40 9.5
45gb|AC078895.34| Mus musculus strain C57BL/6J chromosome 16 clone... 40 9.5
46gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 9.5

>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score =  753 bits (380), Expect = 0.0
 Identities = 383/384 (99%)
 Strand = Plus / Plus

                                                                        
Query: 251  cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 2958

                                                                        
Query: 311  gctctacccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgag 370
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2959 gctctacccggtctctgtgatcaagacccggatgcaggttgcctcgggggaggccatgag 3018

                                                                        
Query: 371  gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3019 gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 3078

                                                                        
Query: 431  ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3079 ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 3138

                                                                        
Query: 491  gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtc 550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3139 gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtc 3198

                                                                        
Query: 551  gatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggc 610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3199 gatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggc 3258

                                    
Query: 611  cgtgtttgtgcccattgatgtggt 634
            ||||||||||||||||||||||||
Sbjct: 3259 cgtgtttgtgcccattgatgtggt 3282



 Score =  222 bits (112), Expect = 1e-54
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                        
Query: 139  ggccgccgcgccctcgcctccggggatcgcgggattgggcggccatggacacctctacta 198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2519 ggccgccgcgccctcgcctccggggatcgcgggattgggcggccatggacacctctacta 2578

                                                                
Query: 199  gggcggccaagatcccctccctcccccaacagacggagatcaactgggacaa 250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2579 gggcggccaagatcccctccctcccccaacagacggagatcaactgggacaa 2630



 Score =  208 bits (105), Expect = 2e-50
 Identities = 108/109 (99%)
 Strand = Plus / Plus

                                                                        
Query: 14   gccagaggaggcgaggaacacatggtctctttcctccccgctgaagagtagctgccaaga 73
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2388 gccagaggaggcgaggaacacatgctctctttcctccccgctgaagagtagctgccaaga 2447

                                                             
Query: 74   ccaccacggaagcggaggcgcaccacccaggcgggccattctcgccgag 122
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2448 ccaccacggaagcggaggcgcaccacccaggcgggccattctcgccgag 2496



 Score =  131 bits (66), Expect = 3e-27
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                        
Query: 632  ggttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtggaat 691
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 ggttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtggaat 3455

                  
Query: 692  cgatgt 697
            ||||||
Sbjct: 3456 cgatgt 3461



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>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score =  642 bits (324), Expect = 0.0
 Identities = 369/384 (96%)
 Strand = Plus / Plus

                                                                         
Query: 251   cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 310
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 30563 cctcgacatgaccaagctctatgtggtgggggccggcatgttcagctgcgtgaccgtggc 30622

                                                                         
Query: 311   gctctacccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgag 370
             |||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 30623 gctctacccggtgtccgtgatcaagacccggatgcaggtggcctccggggaggccatgag 30682

                                                                         
Query: 371   gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 430
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 30683 gaggaacgccctggccaccttcaagaacatcctcaaggtggatggggtgcctgggctcta 30742

                                                                         
Query: 431   ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 490
             ||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 30743 ccgggggtttgggaccgtcatcaccggggctatcccggctaggatcatctttctcacggc 30802

                                                                         
Query: 491   gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtc 550
             ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 30803 gcttgagaagacaaaggcgacttcgctcaagcttgtcgagccacttcagctgtcagagtc 30862

                                                                         
Query: 551   gatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggc 610
             |||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 30863 gatggaggctgcgcttgctaatggcctcggtggtttgacagcgtctctgtgctcgcaggc 30922

                                     
Query: 611   cgtgtttgtgcccattgatgtggt 634
             ||||||||||||||||||||||||
Sbjct: 30923 cgtgtttgtgcccattgatgtggt 30946



 Score =  188 bits (95), Expect = 2e-44
 Identities = 104/107 (97%)
 Strand = Plus / Plus

                                                                         
Query: 144   ccgcgccctcgcctccggggatcgcgggattgggcggccatggacacctctactagggcg 203
             |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 30185 ccgcgctctcgcctcccgggatcgcgggattgggcggcgatggacacctctactagggcg 30244

                                                            
Query: 204   gccaagatcccctccctcccccaacagacggagatcaactgggacaa 250
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30245 gccaagatcccctccctcccccaacagacggagatcaactgggacaa 30291



 Score =  107 bits (54), Expect = 5e-20
 Identities = 63/66 (95%)
 Strand = Plus / Plus

                                                                         
Query: 632   ggttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtggaat 691
             |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 31054 ggttagccagaaattgatggttcaaggatattctggtcatgtcagatataagggtggaat 31113

                   
Query: 692   cgatgt 697
              |||||
Sbjct: 31114 agatgt 31119



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                    
Query: 14    gccagaggaggcgaggaacacatggtctctttcctccccgctgaagagtagctgc 68
             |||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 30012 gccagaggaggcgaggaacacatgctctctttcctccgcgctgaagagtagctgc 30066



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>ref|XM_469800.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1681

 Score =  450 bits (227), Expect = e-123
 Identities = 422/487 (86%)
 Strand = Plus / Plus

                                                                       
Query: 203 ggccaagatcccctccctcccccaacagacggagatcaactgggacaacctcgacatgac 262
           |||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||| |||
Sbjct: 271 ggccaagatcccgtcccttcaccaccagacggagatcaactgggacaacctcgacaagac 330

                                                                       
Query: 263 caagctctatgtggttggggccggcatgttcagctgcgtgaccgtggcgctctacccggt 322
           ||||||||||||||| || ||||| ||||||||  |||||||||||||||| ||||||||
Sbjct: 331 caagctctatgtggtgggagccgggatgttcagtggcgtgaccgtggcgctgtacccggt 390

                                                                       
Query: 323 ctctgtgatcaagacccggatgcaggttgcctccggggaggccatgaggaggaacgccct 382
            || ||||| ||||||||||||||||| ||| | ||||| ||| |||||||||| |||  
Sbjct: 391 atcggtgataaagacccggatgcaggtagccactggggaagccgtgaggaggaatgccgc 450

                                                                       
Query: 383 ggccacctttaagaacatcctcaaggtggatggggtgcctgggctctaccgagggtttgg 442
           ||| || || | |||||| ||||||||||| || ||||| ||||| ||||||||||||||
Sbjct: 451 ggcaacattcaggaacattctcaaggtggacggagtgcccgggctgtaccgagggtttgg 510

                                                                       
Query: 443 gaccgtcatcactggggctatcccggctaggattatcttcctcacggcgctcgagaagac 502
           ||| || ||||| ||||| ||||| |||||||||||||| || || ||||| ||||  ||
Sbjct: 511 gacagttatcacaggggccatccctgctaggattatctttcttacagcgcttgagacaac 570

                                                                       
Query: 503 aaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtcgatggaggctgc 562
           ||||||| | ||||| |||||||| || ||  || ||||||| ||| || |  | || ||
Sbjct: 571 aaaggcggcctcgcttaagcttgttgaaccatttaagctgtcggagccggtacaagcagc 630

                                                                       
Query: 563 ccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggccgtgtttgtgcc 622
           | |||| ||||||||||| |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 631 ctttgccaatggccttggcggtttgtcggcatctctatgttcgcaggctgtgtttgtgcc 690

                                                                       
Query: 623 cattgatgtggttagtcagaaattgatggttcaaggatattctggtcatgttagatataa 682
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cattgatgtggttagccagaaattgatggttcaaggatattctggtcatgttagatataa 750

                  
Query: 683 gggtgga 689
           |||||||
Sbjct: 751 gggtgga 757



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>dbj|AK101584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050O16, full
           insert sequence
          Length = 1711

 Score =  450 bits (227), Expect = e-123
 Identities = 422/487 (86%)
 Strand = Plus / Plus

                                                                       
Query: 203 ggccaagatcccctccctcccccaacagacggagatcaactgggacaacctcgacatgac 262
           |||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||| |||
Sbjct: 330 ggccaagatcccgtcccttcaccaccagacggagatcaactgggacaacctcgacaagac 389

                                                                       
Query: 263 caagctctatgtggttggggccggcatgttcagctgcgtgaccgtggcgctctacccggt 322
           ||||||||||||||| || ||||| ||||||||  |||||||||||||||| ||||||||
Sbjct: 390 caagctctatgtggtgggagccgggatgttcagtggcgtgaccgtggcgctgtacccggt 449

                                                                       
Query: 323 ctctgtgatcaagacccggatgcaggttgcctccggggaggccatgaggaggaacgccct 382
            || ||||| ||||||||||||||||| ||| | ||||| ||| |||||||||| |||  
Sbjct: 450 atcggtgataaagacccggatgcaggtagccactggggaagccgtgaggaggaatgccgc 509

                                                                       
Query: 383 ggccacctttaagaacatcctcaaggtggatggggtgcctgggctctaccgagggtttgg 442
           ||| || || | |||||| ||||||||||| || ||||| ||||| ||||||||||||||
Sbjct: 510 ggcaacattcaggaacattctcaaggtggacggagtgcccgggctgtaccgagggtttgg 569

                                                                       
Query: 443 gaccgtcatcactggggctatcccggctaggattatcttcctcacggcgctcgagaagac 502
           ||| || ||||| ||||| ||||| |||||||||||||| || || ||||| ||||  ||
Sbjct: 570 gacagttatcacaggggccatccctgctaggattatctttcttacagcgcttgagacaac 629

                                                                       
Query: 503 aaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtcgatggaggctgc 562
           ||||||| | ||||| |||||||| || ||  || ||||||| ||| || |  | || ||
Sbjct: 630 aaaggcggcctcgcttaagcttgttgaaccatttaagctgtcggagccggtacaagcagc 689

                                                                       
Query: 563 ccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggccgtgtttgtgcc 622
           | |||| ||||||||||| |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 690 ctttgccaatggccttggcggtttgtcggcatctctatgttcgcaggctgtgtttgtgcc 749

                                                                       
Query: 623 cattgatgtggttagtcagaaattgatggttcaaggatattctggtcatgttagatataa 682
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 cattgatgtggttagccagaaattgatggttcaaggatattctggtcatgttagatataa 809

                  
Query: 683 gggtgga 689
           |||||||
Sbjct: 810 gggtgga 816



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>gb|BT017820.1| Zea mays clone EL01N0508A02.c mRNA sequence
          Length = 1459

 Score =  295 bits (149), Expect = 1e-76
 Identities = 411/495 (83%), Gaps = 5/495 (1%)
 Strand = Plus / Plus

                                                                       
Query: 196 ctagggcggccaagatcccctccctcccccaacagacggagatcaactgggacaacctcg 255
           ||||||| ||||||||||| || |||| |||   |||||||||||||||||| |||||||
Sbjct: 56  ctagggccgccaagatcccgtcgctccacca---gacggagatcaactgggataacctcg 112

                                                                       
Query: 256 acatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggcgctct 315
           ||| |||||||||||| ||||| || || |||||||||||| | || ||||||||||| |
Sbjct: 113 acaagaccaagctctacgtggtgggcgcaggcatgttcagcggggtcaccgtggcgctgt 172

                                                                       
Query: 316 acccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgaggagga 375
           |||| || || ||| ||||||||||||||||||||||||| ||||| |||||| ||||||
Sbjct: 173 accctgtatcggtggtcaagacccggatgcaggttgcctctggggatgccatggggagga 232

                                                                       
Query: 376 acgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctctaccgag 435
           |||| ||||| ||||| ||||||||||| |||||||| || ||||| ||||| ||||| |
Sbjct: 233 acgcgctggctaccttcaagaacatccttaaggtggacggcgtgccagggctgtaccggg 292

                                                                       
Query: 436 ggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggcgctcg 495
           |||||   || || || | ||||||| | ||  ||||||||||||||||||||||||| |
Sbjct: 293 ggtttcctactgttataattggggctgtaccaactaggattatcttcctcacggcgcttg 352

                                                                       
Query: 496 agaagacaaaggcgacttcgctcaagcttgtcgagcctcttc-agctgtcagagtcgatg 554
           |||  || || ||  | || ||||||||||| ||||| |||| ||||||||||| || ||
Sbjct: 353 agacaaccaaagcagcctctctcaagcttgttgagcc-cttcaagctgtcagagccggtg 411

                                                                       
Query: 555 gaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggccgtg 614
            |||| ||| |||| ||||||||||  ||| || |||| ||    |||||||||||  | 
Sbjct: 412 caggccgcctttgccaatggccttgccggtctgtcggcatccacatgttcgcaggctatt 471

                                                                       
Query: 615 tttgtgcccattgatgtggttagtcagaaattgatggttcaaggatattctggtcatgtt 674
           ||||| || ||||||||| | || |||||||||||||||||||| ||||||||| |||| 
Sbjct: 472 tttgtcccaattgatgtgatcagccagaaattgatggttcaagggtattctggtaatgtc 531

                          
Query: 675 agatataagggtgga 689
           ||||| || ||||||
Sbjct: 532 agatacaaaggtgga 546



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  285 bits (144), Expect = 1e-73
 Identities = 324/384 (84%)
 Strand = Plus / Plus

                                                                            
Query: 251      cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 310
                |||||||| |||||||||||||||||| || ||||| ||||||||  |||||||||||||
Sbjct: 30827071 cctcgacaagaccaagctctatgtggtgggagccgggatgttcagtggcgtgaccgtggc 30827130

                                                                            
Query: 311      gctctacccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgag 370
                ||| |||||||| || ||||| ||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 30827131 gctgtacccggtatcggtgataaagacccggatgcaggtagccactggggaagccgtgag 30827190

                                                                            
Query: 371      gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 430
                |||||| |||  ||| || || | |||||| ||||||||||| || ||||| ||||| ||
Sbjct: 30827191 gaggaatgccgcggcaacattcaggaacattctcaaggtggacggagtgcccgggctgta 30827250

                                                                            
Query: 431      ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 490
                ||||||||||||||| || ||||| ||||| ||||| |||||||||||||| || || ||
Sbjct: 30827251 ccgagggtttgggacagttatcacaggggccatccctgctaggattatctttcttacagc 30827310

                                                                            
Query: 491      gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtc 550
                ||| ||||  ||||||||| | ||||| |||||||| || ||  || ||||||| ||| |
Sbjct: 30827311 gcttgagacaacaaaggcggcctcgcttaagcttgttgaaccatttaagctgtcggagcc 30827370

                                                                            
Query: 551      gatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggc 610
                | |  | || ||| |||| ||||||||||| |||||| |||| ||||| |||||||||||
Sbjct: 30827371 ggtacaagcagcctttgccaatggccttggcggtttgtcggcatctctatgttcgcaggc 30827430

                                        
Query: 611      cgtgtttgtgcccattgatgtggt 634
                 |||||||||||||||||||||||
Sbjct: 30827431 tgtgtttgtgcccattgatgtggt 30827454



 Score =  107 bits (54), Expect = 5e-20
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                          
Query: 632      ggttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 689
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30827559 ggttagccagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 30827616



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 203      ggccaagatcccctccctcccccaacagacggagatcaactgggacaa 250
                |||||||||||| ||||| | ||| |||||||||||||||||||||||
Sbjct: 30826576 ggccaagatcccgtcccttcaccaccagacggagatcaactgggacaa 30826623



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>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete
              sequence
          Length = 122496

 Score =  285 bits (144), Expect = 1e-73
 Identities = 324/384 (84%)
 Strand = Plus / Minus

                                                                          
Query: 251    cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 310
              |||||||| |||||||||||||||||| || ||||| ||||||||  |||||||||||||
Sbjct: 116019 cctcgacaagaccaagctctatgtggtgggagccgggatgttcagtggcgtgaccgtggc 115960

                                                                          
Query: 311    gctctacccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgag 370
              ||| |||||||| || ||||| ||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 115959 gctgtacccggtatcggtgataaagacccggatgcaggtagccactggggaagccgtgag 115900

                                                                          
Query: 371    gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 430
              |||||| |||  ||| || || | |||||| ||||||||||| || ||||| ||||| ||
Sbjct: 115899 gaggaatgccgcggcaacattcaggaacattctcaaggtggacggagtgcccgggctgta 115840

                                                                          
Query: 431    ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 490
              ||||||||||||||| || ||||| ||||| ||||| |||||||||||||| || || ||
Sbjct: 115839 ccgagggtttgggacagttatcacaggggccatccctgctaggattatctttcttacagc 115780

                                                                          
Query: 491    gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtc 550
              ||| ||||  ||||||||| | ||||| |||||||| || ||  || ||||||| ||| |
Sbjct: 115779 gcttgagacaacaaaggcggcctcgcttaagcttgttgaaccatttaagctgtcggagcc 115720

                                                                          
Query: 551    gatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggc 610
              | |  | || ||| |||| ||||||||||| |||||| |||| ||||| |||||||||||
Sbjct: 115719 ggtacaagcagcctttgccaatggccttggcggtttgtcggcatctctatgttcgcaggc 115660

                                      
Query: 611    cgtgtttgtgcccattgatgtggt 634
               |||||||||||||||||||||||
Sbjct: 115659 tgtgtttgtgcccattgatgtggt 115636



 Score =  107 bits (54), Expect = 5e-20
 Identities = 57/58 (98%)
 Strand = Plus / Minus

                                                                        
Query: 632    ggttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 689
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115531 ggttagccagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 115474



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 203    ggccaagatcccctccctcccccaacagacggagatcaactgggacaa 250
              |||||||||||| ||||| | ||| |||||||||||||||||||||||
Sbjct: 116514 ggccaagatcccgtcccttcaccaccagacggagatcaactgggacaa 116467



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>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial
            sequence
          Length = 65547

 Score =  285 bits (144), Expect = 1e-73
 Identities = 324/384 (84%)
 Strand = Plus / Plus

                                                                        
Query: 251  cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 310
            |||||||| |||||||||||||||||| || ||||| ||||||||  |||||||||||||
Sbjct: 5060 cctcgacaagaccaagctctatgtggtgggagccgggatgttcagtggcgtgaccgtggc 5119

                                                                        
Query: 311  gctctacccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgag 370
            ||| |||||||| || ||||| ||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 5120 gctgtacccggtatcggtgataaagacccggatgcaggtagccactggggaagccgtgag 5179

                                                                        
Query: 371  gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 430
            |||||| |||  ||| || || | |||||| ||||||||||| || ||||| ||||| ||
Sbjct: 5180 gaggaatgccgcggcaacattcaggaacattctcaaggtggacggagtgcccgggctgta 5239

                                                                        
Query: 431  ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 490
            ||||||||||||||| || ||||| ||||| ||||| |||||||||||||| || || ||
Sbjct: 5240 ccgagggtttgggacagttatcacaggggccatccctgctaggattatctttcttacagc 5299

                                                                        
Query: 491  gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtc 550
            ||| ||||  ||||||||| | ||||| |||||||| || ||  || ||||||| ||| |
Sbjct: 5300 gcttgagacaacaaaggcggcctcgcttaagcttgttgaaccatttaagctgtcggagcc 5359

                                                                        
Query: 551  gatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggc 610
            | |  | || ||| |||| ||||||||||| |||||| |||| ||||| |||||||||||
Sbjct: 5360 ggtacaagcagcctttgccaatggccttggcggtttgtcggcatctctatgttcgcaggc 5419

                                    
Query: 611  cgtgtttgtgcccattgatgtggt 634
             |||||||||||||||||||||||
Sbjct: 5420 tgtgtttgtgcccattgatgtggt 5443



 Score =  107 bits (54), Expect = 5e-20
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                      
Query: 632  ggttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 689
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5548 ggttagccagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 5605



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                            
Query: 203  ggccaagatcccctccctcccccaacagacggagatcaactgggacaa 250
            |||||||||||| ||||| | ||| |||||||||||||||||||||||
Sbjct: 4565 ggccaagatcccgtcccttcaccaccagacggagatcaactgggacaa 4612



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  285 bits (144), Expect = 1e-73
 Identities = 324/384 (84%)
 Strand = Plus / Plus

                                                                            
Query: 251      cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 310
                |||||||| |||||||||||||||||| || ||||| ||||||||  |||||||||||||
Sbjct: 30917594 cctcgacaagaccaagctctatgtggtgggagccgggatgttcagtggcgtgaccgtggc 30917653

                                                                            
Query: 311      gctctacccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgag 370
                ||| |||||||| || ||||| ||||||||||||||||| ||| | ||||| ||| ||||
Sbjct: 30917654 gctgtacccggtatcggtgataaagacccggatgcaggtagccactggggaagccgtgag 30917713

                                                                            
Query: 371      gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 430
                |||||| |||  ||| || || | |||||| ||||||||||| || ||||| ||||| ||
Sbjct: 30917714 gaggaatgccgcggcaacattcaggaacattctcaaggtggacggagtgcccgggctgta 30917773

                                                                            
Query: 431      ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 490
                ||||||||||||||| || ||||| ||||| ||||| |||||||||||||| || || ||
Sbjct: 30917774 ccgagggtttgggacagttatcacaggggccatccctgctaggattatctttcttacagc 30917833

                                                                            
Query: 491      gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttcagctgtcagagtc 550
                ||| ||||  ||||||||| | ||||| |||||||| || ||  || ||||||| ||| |
Sbjct: 30917834 gcttgagacaacaaaggcggcctcgcttaagcttgttgaaccatttaagctgtcggagcc 30917893

                                                                            
Query: 551      gatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcaggc 610
                | |  | || ||| |||| ||||||||||| |||||| |||| ||||| |||||||||||
Sbjct: 30917894 ggtacaagcagcctttgccaatggccttggcggtttgtcggcatctctatgttcgcaggc 30917953

                                        
Query: 611      cgtgtttgtgcccattgatgtggt 634
                 |||||||||||||||||||||||
Sbjct: 30917954 tgtgtttgtgcccattgatgtggt 30917977



 Score =  107 bits (54), Expect = 5e-20
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                          
Query: 632      ggttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 689
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30918082 ggttagccagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 30918139



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 203      ggccaagatcccctccctcccccaacagacggagatcaactgggacaa 250
                |||||||||||| ||||| | ||| |||||||||||||||||||||||
Sbjct: 30917099 ggccaagatcccgtcccttcaccaccagacggagatcaactgggacaa 30917146



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>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score =  248 bits (125), Expect = 2e-62
 Identities = 322/385 (83%), Gaps = 2/385 (0%)
 Strand = Plus / Plus

                                                                        
Query: 251  cctcgacatgaccaagctctatgtggttggggccggcatgttcagctgcgtgaccgtggc 310
            |||||||| |||||||||||| ||||| || || |||||||||||| |||| ||||||||
Sbjct: 8339 cctcgacaagaccaagctctacgtggtgggcgcaggcatgttcagcggcgtcaccgtggc 8398

                                                                        
Query: 311  gctctacccggtctctgtgatcaagacccggatgcaggttgcctccggggaggccatgag 370
            ||| || || ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 8399 gctgtatcctgtctcggtggtcaagacccggatgcaggttgcctctggggacgccatgag 8458

                                                                        
Query: 371  gaggaacgccctggccacctttaagaacatcctcaaggtggatggggtgcctgggctcta 430
            ||||||||| ||||| ||||| ||||||||||||||| |||| || ||||| ||||| ||
Sbjct: 8459 gaggaacgcgctggctaccttcaagaacatcctcaagatggacggcgtgccagggctgta 8518

                                                                        
Query: 431  ccgagggtttgggaccgtcatcactggggctatcccggctaggattatcttcctcacggc 490
            ||| |||||||  ||||| |||| ||||||| | ||  ||||||| ||||||||||| ||
Sbjct: 8519 ccgggggtttgctaccgttatcattggggctgtaccaactaggatcatcttcctcacagc 8578

                                                                        
Query: 491  gctcgagaagacaaaggcgacttcgctcaagcttgtcgagcctcttc-agctgtcagagt 549
            ||| ||||  || || ||  | ||||| |||||||| ||||| |||| ||||||||||| 
Sbjct: 8579 gcttgagacaaccaaagcagcctcgcttaagcttgttgagcc-cttcaagctgtcagagc 8637

                                                                        
Query: 550  cgatggaggctgcccttgctaatggccttggtggtttgacggcgtctctgtgttcgcagg 609
            || ||  ||||||| |||| |||||||||| |||| || | ||||||   ||||||||||
Sbjct: 8638 cggtgcgggctgcctttgccaatggccttgctggtctgtcagcgtctacatgttcgcagg 8697

                                     
Query: 610  ccgtgtttgtgcccattgatgtggt 634
            |  | ||||| || |||||||||||
Sbjct: 8698 ctatttttgttccaattgatgtggt 8722



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 634  ttagtcagaaattgatggttcaaggatattctggtcatgttagatataagggtgga 689
            |||| |||||||||||||||||||||||||||||| |||  ||||| || ||||||
Sbjct: 8850 ttagccagaaattgatggttcaaggatattctggtaatgccagatacaaaggtgga 8905



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 48/55 (87%), Gaps = 3/55 (5%)
 Strand = Plus / Plus

                                                                   
Query: 196  ctagggcggccaagatcccctccctcccccaacagacggagatcaactgggacaa 250
            ||||||| ||||||||||| || |||| |||   |||||||||||||||||||||
Sbjct: 8007 ctagggccgccaagatcccgtcgctccacca---gacggagatcaactgggacaa 8058



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>gb|BC020144.1| Mus musculus desmoglein 2, mRNA (cDNA clone IMAGE:3993281),
           complete cds
          Length = 988

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 141 ccgccgcgccctcgcctccggg 162
           ||||||||||||||||||||||
Sbjct: 54  ccgccgcgccctcgcctccggg 33



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>ref|NM_007883.1| Mus musculus desmoglein 2 (Dsg2), mRNA
          Length = 4065

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 141 ccgccgcgccctcgcctccggg 162
           ||||||||||||||||||||||
Sbjct: 188 ccgccgcgccctcgcctccggg 167



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>ref|NM_174656.2| Bos taurus solute carrier family 25 (mitochondrial carrier; citrate
           transporter), member 1 (SLC25A1), mRNA
          Length = 1151

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 327 gtgatcaagacccggatgcagg 348
           ||||||||||||||||||||||
Sbjct: 734 gtgatcaagacccggatgcagg 755



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>gb|BC044848.1| Mus musculus desmoglein 2, mRNA (cDNA clone IMAGE:5355674),
           complete cds
          Length = 3611

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 141 ccgccgcgccctcgcctccggg 162
           ||||||||||||||||||||||
Sbjct: 121 ccgccgcgccctcgcctccggg 100



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>gb|AC132091.3| Mus musculus BAC clone RP24-465H15 from 18, complete sequence
          Length = 140256

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 141   ccgccgcgccctcgcctccggg 162
             ||||||||||||||||||||||
Sbjct: 34671 ccgccgcgccctcgcctccggg 34650



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>emb|X97773.1|BTMITRICP B.taurus mRNA for mitochondrial tricarboxylate carrier protein
          Length = 1151

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 327 gtgatcaagacccggatgcagg 348
           ||||||||||||||||||||||
Sbjct: 734 gtgatcaagacccggatgcagg 755



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>dbj|AB072269.1| Mus musculus mDSG2 mRNA for desmoglein 2, complete cds
          Length = 4065

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 141 ccgccgcgccctcgcctccggg 162
           ||||||||||||||||||||||
Sbjct: 188 ccgccgcgccctcgcctccggg 167



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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
              complete sequence
          Length = 156772

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    gccgccgcgccctcgcctccg 160
              |||||||||||||||||||||
Sbjct: 103434 gccgccgcgccctcgcctccg 103454



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>emb|Z94044.2|HS154P24 Human DNA sequence from clone RP1-154P24 on chromosome Xp11.1-11.23
             Contains the 5' end of the gene for upstream regulatory
             element binding protein 1 (UREB1) and three CpG islands,
             complete sequence
          Length = 110870

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 211   tcccctccctcccccaacaga 231
             |||||||||||||||||||||
Sbjct: 67075 tcccctccctcccccaacaga 67095



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 140      gccgccgcgccctcgcctccg 160
                |||||||||||||||||||||
Sbjct: 19756545 gccgccgcgccctcgcctccg 19756565



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 140     gccgccgcgccctcgcctccg 160
               |||||||||||||||||||||
Sbjct: 4216955 gccgccgcgccctcgcctccg 4216975



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>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence
          Length = 117100

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 207  aagatcccctccctcccccaa 227
            |||||||||||||||||||||
Sbjct: 9904 aagatcccctccctcccccaa 9884



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>gb|AC012513.12| Homo sapiens BAC clone RP11-566E18 from 2, complete sequence
          Length = 164935

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    tcccctccctcccccaacaga 231
              |||||||||||||||||||||
Sbjct: 156021 tcccctccctcccccaacaga 156001



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>gb|AC069155.6| Homo sapiens BAC clone RP11-737C8 from 2, complete sequence
          Length = 123153

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 211   tcccctccctcccccaacaga 231
             |||||||||||||||||||||
Sbjct: 62644 tcccctccctcccccaacaga 62624



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>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0048D08
          Length = 145772

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   gccgccgcgccctcgcctccg 160
             |||||||||||||||||||||
Sbjct: 88551 gccgccgcgccctcgcctccg 88571



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>gb|AC008123.9|AC008123 Homo sapiens 2q35 BAC RPCI11-1064L18 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 168601

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    tcccctccctcccccaacaga 231
              |||||||||||||||||||||
Sbjct: 142503 tcccctccctcccccaacaga 142483



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>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete
             sequence
          Length = 98657

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   aagatcccctccctcccccaa 227
             |||||||||||||||||||||
Sbjct: 62536 aagatcccctccctcccccaa 62556



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>dbj|AP006180.2| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1746H11, complete
            sequence
          Length = 26842

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 207  aagatcccctccctcccccaa 227
            |||||||||||||||||||||
Sbjct: 9638 aagatcccctccctcccccaa 9658



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>gb|AY803117.1| Sus scrofa chromosome 17 clone pkmCon86, mRNA sequence
          Length = 1437

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  attcggcacgagggccagag 20
          ||||||||||||||||||||
Sbjct: 6  attcggcacgagggccagag 25



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>gb|AY549596.1| Enterobacter sp. TERIPS12009 16S ribosomal RNA gene, partial
           sequence
          Length = 451

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  ttcctccccgctgaagagta 63
           ||||||||||||||||||||
Sbjct: 387 ttcctccccgctgaagagta 368



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>gb|AC005817.8| Mus musculus strain 129/Sv clone ct7-581i11 map 16, complete sequence
          Length = 188708

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 326   tgtgatcaagacccggatgcaggt 349
             ||||||||||||| ||||||||||
Sbjct: 25632 tgtgatcaagaccaggatgcaggt 25609



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>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence
          Length = 211181

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    tcccctccctcccccaacag 230
              ||||||||||||||||||||
Sbjct: 156933 tcccctccctcccccaacag 156914



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>gb|AC162922.4| Mus musculus BAC clone RP23-314M6 from chromosome 3, complete sequence
          Length = 245207

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     gggccagaggaggcgaggaacaca 35
              |||| |||||||||||||||||||
Sbjct: 147618 gggcaagaggaggcgaggaacaca 147595



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>gb|AC003063.7| Mus musculus Chromosome 16 BAC Clone b40-o20 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 128143

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 326   tgtgatcaagacccggatgcaggt 349
             ||||||||||||| ||||||||||
Sbjct: 94825 tgtgatcaagaccaggatgcaggt 94802



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>gb|AC129293.9| Mus musculus BAC clone RP24-535M14 from chromosome 3, complete
            sequence
          Length = 163981

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   gggccagaggaggcgaggaacaca 35
            |||| |||||||||||||||||||
Sbjct: 7438 gggcaagaggaggcgaggaacaca 7415



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>gb|L76134.1|HUMCTPG Homo sapiens citrate transport protein gene, complete cds; nuclear
            gene for mitochondrial product
          Length = 3501

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 326  tgtgatcaagacccggatgcaggt 349
            |||||| |||||||||||||||||
Sbjct: 2340 tgtgattaagacccggatgcaggt 2363



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>gb|AC004463.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 79h12 In DGCR Region,
             complete sequence
          Length = 38254

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 326   tgtgatcaagacccggatgcaggt 349
             |||||| |||||||||||||||||
Sbjct: 33613 tgtgattaagacccggatgcaggt 33590



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>gb|AC079043.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-397e16, complete
             sequence
          Length = 214471

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 326   tgtgatcaagacccggatgcaggt 349
             ||||||||||||| ||||||||||
Sbjct: 25654 tgtgatcaagaccaggatgcaggt 25631



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 88      gaggcgcaccacccaggcgggcca 111
               |||||||||| |||||||||||||
Sbjct: 2288827 gaggcgcaccgcccaggcgggcca 2288850



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>emb|X96924.1|HAMCTP H.sapiens gene encoding mitochondrial citrate transport protein
          Length = 2770

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 326  tgtgatcaagacccggatgcaggt 349
            |||||| |||||||||||||||||
Sbjct: 1743 tgtgattaagacccggatgcaggt 1766



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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     gctgcgtgaccgtggcgctc 314
               ||||||||||||||||||||
Sbjct: 2004277 gctgcgtgaccgtggcgctc 2004258



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>gb|L77569.1|HUMDGCRTEL Homo sapiens DiGeorge syndrome critical region, telomeric end
          Length = 47500

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 326  tgtgatcaagacccggatgcaggt 349
            |||||| |||||||||||||||||
Sbjct: 1162 tgtgattaagacccggatgcaggt 1139



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>gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, complete sequence
          Length = 221245

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   aagctctatgtggttggggc 283
             ||||||||||||||||||||
Sbjct: 58158 aagctctatgtggttggggc 58139



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>gb|AC087064.27| Mus musculus strain C57BL/6J chromosome 16 clone rp23-428i4, complete
              sequence
          Length = 211848

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 326    tgtgatcaagacccggatgcaggt 349
              ||||||||||||| ||||||||||
Sbjct: 209103 tgtgatcaagaccaggatgcaggt 209126



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>gb|AC078895.34| Mus musculus strain C57BL/6J chromosome 16 clone rp23-372h6, complete
             sequence
          Length = 211256

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 326   tgtgatcaagacccggatgcaggt 349
             ||||||||||||| ||||||||||
Sbjct: 60819 tgtgatcaagaccaggatgcaggt 60842



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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     accacggaagcggaggcgca 95
              ||||||||||||||||||||
Sbjct: 646227 accacggaagcggaggcgca 646246


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,809,824
Number of Sequences: 3902068
Number of extensions: 4809824
Number of successful extensions: 90526
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90157
Number of HSP's gapped (non-prelim): 359
length of query: 697
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 674
effective length of database: 17,143,297,704
effective search space: 11554582652496
effective search space used: 11554582652496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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