ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DR206_PEA (P13240) Disease resistance response protein 206 74 4e-13
2FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead... 32 1.7
3YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P... 31 2.8
4HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4) 30 4.8
5LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2... 30 6.3
6DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysi... 30 6.3
7FOXL2_HUMAN (P58012) Forkhead box protein L2 30 6.3
8RAGE_HUMAN (Q15109) Advanced glycosylation end product-specific ... 30 8.2
9PER2_ARAHY (P22196) Cationic peroxidase 2 precursor (EC 1.11.1.7... 30 8.2

>DR206_PEA (P13240) Disease resistance response protein 206|
          Length = 184

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
 Frame = +2

Query: 86  FFLHDVV----SGSNPTAVQIIKGP--ASSSNAFPGMAFGDTTVIDDALTETSSPTSAPV 247
           F+ HD++    + +N T+  I+  P   S +   P   FG+  V DD +T + S +S  V
Sbjct: 36  FYFHDILYNGKNAANATSA-IVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQV 94

Query: 248 GRAQGFYMMSSQSGMVLMMCVNFLLTTGDYNGSTLAVIGRDDIMTTTRELSVVGGTGKFR 427
           GRAQGFY+  +++     +   F+L +  + G T+   G D I+  TR++SV GGTG F 
Sbjct: 95  GRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQG-TITFAGADPIVAKTRDISVTGGTGDFF 153

Query: 428 MATGYVLWKTNSSKGADATIELDVY 502
           M  G     T++ +G +A   L VY
Sbjct: 154 MHRGIATITTDAFEG-EAYFRLGVY 177



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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
 Frame = +1

Query: 34  PPLPPP-------AHHLRGGHASPLLPPRRGLREQPDGGADHQGP 147
           PP PPP       AHHL    A P  PP  G    P G      P
Sbjct: 282 PPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASP 326



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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
            precursor
          Length = 943

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 24/174 (13%)
 Frame = +2

Query: 107  SGSNPTA---VQIIKGPASSSNAFPGMAFGDTTVIDDALTETSSPT---SAPVGRAQGFY 268
            SG N T+      +  P S+S+A+P       + +   LT +  PT    +  G A G  
Sbjct: 623  SGFNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTSSIIPTETFGSTSGSATGTR 682

Query: 269  MM-SSQSGMVLMMCVNFLLTTGDYNGSTLAV--------IGRDDIMTTTRELSVVGGTGK 421
               SS  G V+         T    G+T  V            +I+T+T E +   GTG 
Sbjct: 683  PTGSSSQGSVVPTTSTGSSVTSTGTGTTTGVTEVTETSTFETTEIITSTIEPTTASGTGG 742

Query: 422  FRMATG-----YVLWKTNSSKGADATIELDVYTTALNGTTTIDANA----PVSP 556
                        V   T +++G     E   +T+  + TTTI        PV+P
Sbjct: 743  GNPTAAPTNEPTVTTGTETTEGTATYTEPTTFTSTFSFTTTIIGGTTTIIPVNP 796



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>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)|
          Length = 309

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +1

Query: 34  PPLPPPAHHLRGGHASPLLP---PRRGLREQPDGGADHQGPG 150
           PP PPP  HL   H  P LP   PR   R +P   A    PG
Sbjct: 48  PPPPPPPPHLHAAHPGPALPEYFPRP--RREPGYQAPAAPPG 87



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>LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein)
          Length = 1042

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 4   LSYXGSSRRCPPLPPPAHHL 63
           + Y GS RRCPP P P H L
Sbjct: 461 VDYGGSERRCPPPPYPKHLL 480



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>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (DOT1-like protein)
          Length = 1739

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = +1

Query: 34   PPLPPPAHHLRGGHASPLL----PPRRGLREQPDGGADHQGPGLV 156
            PPLPPPAH  R     P+L    PP   L   P   A +  P L+
Sbjct: 1601 PPLPPPAHLGRSPAGPPVLHAPPPPNAALPPPPTLLASNPEPALL 1645



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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
 Frame = +1

Query: 34  PPLPPP---AHHLRGGHASPLLPPRRGLREQPDGGADHQGP 147
           PP P P   AHHL    A P  PP  G    P G      P
Sbjct: 287 PPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASP 327



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>RAGE_HUMAN (Q15109) Advanced glycosylation end product-specific receptor|
           precursor (Receptor for advanced glycosylation end
           products)
          Length = 404

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 341 GSTLAVIGRDDIMTTTRELSVVGGTGKFRMATGYVLWKTNSSKGAD 478
           G T   +G   + T    L ++GG G   +  G +LW+    +G +
Sbjct: 327 GPTAGSVGGSGLGTLALALGILGGLGTAALLIGVILWQRRQRRGEE 372



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>PER2_ARAHY (P22196) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2)|
          Length = 330

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +2

Query: 134 IIKGPASSSNAFPGMAFGDTTVIDDALTETSSPTSAPVGRAQGFYMMSSQSGMVLMMCVN 313
           +I GPA+   AF  +      +IDDA T+  +     V  A     ++++  +VL   ++
Sbjct: 84  LISGPATEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCAD-ILALAARDSVVLSGGLS 142

Query: 314 FLLTTGDYNG 343
           + + TG  +G
Sbjct: 143 WQVPTGRRDG 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.140    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,104,974
Number of Sequences: 219361
Number of extensions: 918464
Number of successful extensions: 3119
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3102
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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