Clone Name | basd3d02 |
---|---|
Clone Library Name | barley_pub |
>DR206_PEA (P13240) Disease resistance response protein 206| Length = 184 Score = 73.9 bits (180), Expect = 4e-13 Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 6/145 (4%) Frame = +2 Query: 86 FFLHDVV----SGSNPTAVQIIKGP--ASSSNAFPGMAFGDTTVIDDALTETSSPTSAPV 247 F+ HD++ + +N T+ I+ P S + P FG+ V DD +T + S +S V Sbjct: 36 FYFHDILYNGKNAANATSA-IVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQV 94 Query: 248 GRAQGFYMMSSQSGMVLMMCVNFLLTTGDYNGSTLAVIGRDDIMTTTRELSVVGGTGKFR 427 GRAQGFY+ +++ + F+L + + G T+ G D I+ TR++SV GGTG F Sbjct: 95 GRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQG-TITFAGADPIVAKTRDISVTGGTGDFF 153 Query: 428 MATGYVLWKTNSSKGADATIELDVY 502 M G T++ +G +A L VY Sbjct: 154 MHRGIATITTDAFEG-EAYFRLGVY 177
>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)| (P-Frk) Length = 375 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%) Frame = +1 Query: 34 PPLPPP-------AHHLRGGHASPLLPPRRGLREQPDGGADHQGP 147 PP PPP AHHL A P PP G P G P Sbjct: 282 PPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASP 326
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 31.2 bits (69), Expect = 2.8 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 24/174 (13%) Frame = +2 Query: 107 SGSNPTA---VQIIKGPASSSNAFPGMAFGDTTVIDDALTETSSPT---SAPVGRAQGFY 268 SG N T+ + P S+S+A+P + + LT + PT + G A G Sbjct: 623 SGFNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTSSIIPTETFGSTSGSATGTR 682 Query: 269 MM-SSQSGMVLMMCVNFLLTTGDYNGSTLAV--------IGRDDIMTTTRELSVVGGTGK 421 SS G V+ T G+T V +I+T+T E + GTG Sbjct: 683 PTGSSSQGSVVPTTSTGSSVTSTGTGTTTGVTEVTETSTFETTEIITSTIEPTTASGTGG 742 Query: 422 FRMATG-----YVLWKTNSSKGADATIELDVYTTALNGTTTIDANA----PVSP 556 V T +++G E +T+ + TTTI PV+P Sbjct: 743 GNPTAAPTNEPTVTTGTETTEGTATYTEPTTFTSTFSFTTTIIGGTTTIIPVNP 796
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 30.4 bits (67), Expect = 4.8 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Frame = +1 Query: 34 PPLPPPAHHLRGGHASPLLP---PRRGLREQPDGGADHQGPG 150 PP PPP HL H P LP PR R +P A PG Sbjct: 48 PPPPPPPPHLHAAHPGPALPEYFPRP--RREPGYQAPAAPPG 87
>LATS2_MOUSE (Q7TSJ6) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large| tumor suppressor homolog 2) (Serine/threonine-protein kinase kpm) (Kinase phosphorylated during mitosis protein) Length = 1042 Score = 30.0 bits (66), Expect = 6.3 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 Query: 4 LSYXGSSRRCPPLPPPAHHL 63 + Y GS RRCPP P P H L Sbjct: 461 VDYGGSERRCPPPPYPKHLL 480
>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific| (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein) Length = 1739 Score = 30.0 bits (66), Expect = 6.3 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Frame = +1 Query: 34 PPLPPPAHHLRGGHASPLL----PPRRGLREQPDGGADHQGPGLV 156 PPLPPPAH R P+L PP L P A + P L+ Sbjct: 1601 PPLPPPAHLGRSPAGPPVLHAPPPPNAALPPPPTLLASNPEPALL 1645
>FOXL2_HUMAN (P58012) Forkhead box protein L2| Length = 376 Score = 30.0 bits (66), Expect = 6.3 Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%) Frame = +1 Query: 34 PPLPPP---AHHLRGGHASPLLPPRRGLREQPDGGADHQGP 147 PP P P AHHL A P PP G P G P Sbjct: 287 PPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASP 327
>RAGE_HUMAN (Q15109) Advanced glycosylation end product-specific receptor| precursor (Receptor for advanced glycosylation end products) Length = 404 Score = 29.6 bits (65), Expect = 8.2 Identities = 12/46 (26%), Positives = 21/46 (45%) Frame = +2 Query: 341 GSTLAVIGRDDIMTTTRELSVVGGTGKFRMATGYVLWKTNSSKGAD 478 G T +G + T L ++GG G + G +LW+ +G + Sbjct: 327 GPTAGSVGGSGLGTLALALGILGGLGTAALLIGVILWQRRQRRGEE 372
>PER2_ARAHY (P22196) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2)| Length = 330 Score = 29.6 bits (65), Expect = 8.2 Identities = 18/70 (25%), Positives = 34/70 (48%) Frame = +2 Query: 134 IIKGPASSSNAFPGMAFGDTTVIDDALTETSSPTSAPVGRAQGFYMMSSQSGMVLMMCVN 313 +I GPA+ AF + +IDDA T+ + V A ++++ +VL ++ Sbjct: 84 LISGPATEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCAD-ILALAARDSVVLSGGLS 142 Query: 314 FLLTTGDYNG 343 + + TG +G Sbjct: 143 WQVPTGRRDG 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.140 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,104,974 Number of Sequences: 219361 Number of extensions: 918464 Number of successful extensions: 3119 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3102 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)