ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3c22 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 115 bits (287), Expect = 1e-25 Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 5/176 (2%) Frame = +3 Query: 30 RXLLQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSH 209 + LL AQ +L+H F ++KSMAL +A LRI DAIHL GGAA+LS + + ++P+++S Sbjct: 11 QSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRVSS 70 Query: 210 LRWLMRVLTTSGVFSADVNASG-----DTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLF 374 LR LMRVLTT+ VF G + Y LT VSRLL+G+ S + +P+ + Sbjct: 71 LRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGS---QSSQLAQTPLAAMV 127 Query: 375 VNPVPITALFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMAA 542 ++P ++ + WF E +F+ HG WE+ DA D L N G+A+ Sbjct: 128 LDPTIVSPFSELGAWFQHE--LPDPCIFKHTHGRGIWELTKDDATFDALVNDGLAS 181
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 86.3 bits (212), Expect = 5e-17 Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 1/169 (0%) Frame = +3 Query: 36 LLQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSHLR 215 LLQAQ +++H + + SM+L A L IPD +H G TLS L I K + Sbjct: 15 LLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCFQ 74 Query: 216 WLMRVLTTSGVFSADVNASG-DTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPI 392 LMR L S F + N++ + Y LT S LL+ ++P+V + ++P Sbjct: 75 RLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLL-----KEAPLTVTPLVQVVLDPTFT 129 Query: 393 TALFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMA 539 + EWFT EK ++ FE A+GCT WE +A + R F+ M+ Sbjct: 130 NPWHHMSEWFTHEK---HATQFEAANGCTFWEKLANEPSKGRFFDEAMS 175
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 80.5 bits (197), Expect = 3e-15 Identities = 53/168 (31%), Positives = 80/168 (47%) Frame = +3 Query: 36 LLQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSHLR 215 LLQAQ +++H + + SM+L A L IPD +H TLS L I K + Sbjct: 15 LLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSFQ 74 Query: 216 WLMRVLTTSGVFSADVNASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPIT 395 LMR L S F + + + + Y LT SRLL+ + ++P+V + ++P Sbjct: 75 RLMRALVNSNFFIEENSNNQEVCYWLTPASRLLLKGAPLT-----VAPLVQVVLDPTFTN 129 Query: 396 ALFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMA 539 + EWF E ++ FE A+GCT WE +A R F+ M+ Sbjct: 130 PWHYMSEWFKHEN---HATQFEAANGCTFWEKLANKPSMGRFFDEAMS 174
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 71.6 bits (174), Expect = 1e-12 Identities = 50/169 (29%), Positives = 84/169 (49%) Frame = +3 Query: 36 LLQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSHLR 215 + +AQ LY H + ++ SM+L A + IP+ IH G +LS+L + + +K+ ++R Sbjct: 13 IFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGNVR 72 Query: 216 WLMRVLTTSGVFSADVNASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPIT 395 LMR L +G F ++ + +Y LT S LLV L+PMV ++P Sbjct: 73 RLMRYLAHNGFF--EIITKEEESYALTVASELLVRGSDLC-----LAPMVECVLDPTLSG 125 Query: 396 ALFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMAA 542 + +++W +E T LF V G W+ + K+ + FN MA+ Sbjct: 126 SYHELKKWIYEEDLT----LFGVTLGSGFWDFLDKNPEYNTSFNDAMAS 170
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 69.7 bits (169), Expect = 5e-12 Identities = 49/169 (28%), Positives = 84/169 (49%) Frame = +3 Query: 36 LLQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSHLR 215 + +AQ LY H + ++ SM+L A ++ IP+ I G +LS+L + + +K+ ++R Sbjct: 13 IFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVR 72 Query: 216 WLMRVLTTSGVFSADVNASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPIT 395 LMR L +G F ++ + +Y LT S LLV L+PMV ++P Sbjct: 73 RLMRYLAHNGFF--EIITKEEESYALTVASELLVRGSDLC-----LAPMVECVLDPTLSG 125 Query: 396 ALFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMAA 542 + +++W +E T LF V G W+ + K+ + FN MA+ Sbjct: 126 SYHELKKWIYEEDLT----LFGVTLGSGFWDFLDKNPEYNTSFNDAMAS 170
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 69.7 bits (169), Expect = 5e-12 Identities = 49/169 (28%), Positives = 84/169 (49%) Frame = +3 Query: 36 LLQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSHLR 215 + +AQ LY H + ++ SM+L A ++ IP+ I G +LS+L + + +K+ ++R Sbjct: 13 IFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVR 72 Query: 216 WLMRVLTTSGVFSADVNASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPIT 395 LMR L +G F ++ + +Y LT S LLV L+PMV ++P Sbjct: 73 RLMRYLAHNGFF--EIITKEEESYALTVASELLVRGSDLC-----LAPMVECVLDPTLSG 125 Query: 396 ALFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMAA 542 + +++W +E T LF V G W+ + K+ + FN MA+ Sbjct: 126 SYHELKKWIYEEDLT----LFGVTLGSGFWDFLDKNPEYNTSFNDAMAS 170
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 50.4 bits (119), Expect = 3e-06 Identities = 39/167 (23%), Positives = 71/167 (42%) Frame = +3 Query: 39 LQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSHLRW 218 ++AQ ++ + + S+ L A +L I D I L+DLA+ + +L Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 219 LMRVLTTSGVFSADVNASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPITA 398 ++R L + + + G Y L ++ LL + + + PM+ +T Sbjct: 72 ILRYLVKMEILRVEKSDDGQKKYALEPIATLL-----SRNAKRSMVPMILGMTQKDFMTP 126 Query: 399 LFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMA 539 S+++ +D + + FE A G T WE + +LFN GMA Sbjct: 127 WHSMKDGLSD-----NGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMA 168
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 47.4 bits (111), Expect = 3e-05 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 4/160 (2%) Frame = +3 Query: 39 LQAQFDLYHHCFVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKLSHLRW 218 ++AQ ++ H F + +++ L + L IPD IH G TLS L + T + Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIH-NNGPVTLSQLVTHLPLKSTSIDRFHH 71 Query: 219 LMRVLTTSGVFSADVN-ASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPIT 395 MR L +F+ + + + Y+LT S+LLV + L+P V L +P + Sbjct: 72 FMRYLVHMQLFTISTDQITKEDKYELTPASKLLV-----HGHQKSLAPYVMLQTHPEEFS 126 Query: 396 ALFSIREWFTDEK---STASSSLFEVAHGCTRWEMIAKDA 506 + +K + +S++E G I DA Sbjct: 127 VWSHVINVLDGKKPYWESNDTSMYEKTEGDPEINEILNDA 166
>CHOMT_MEDSA (P93324) Isoliquiritigenin 2'-O-methyltransferase (EC 2.1.1.-)| (Chalcone O-methyltransferase) (ChOMT) Length = 372 Score = 32.0 bits (71), Expect = 1.1 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 4/110 (3%) Frame = +3 Query: 219 LMRVLTTSGVFSADV----NASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPV 386 ++R+L + V ++ + + Y L+ V + LV + SR + L+ P Sbjct: 88 MLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVP---DESRGY-LASFTTFLCYPA 143 Query: 387 PITALFSIREWFTDEKSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGM 536 + + +E DE LF+ HG T++E + KD +++FN M Sbjct: 144 LLQVWMNFKEAVVDE----DIDLFKNVHGVTKYEFMGKDKKMNQIFNKSM 189
>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid X| receptor-interacting protein 13) (RIP13) Length = 2453 Score = 30.4 bits (67), Expect = 3.3 Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 2/131 (1%) Frame = -2 Query: 518 AVVTGVLCYHLPSCTAVRHLKERR*-GGALFVGEPLAYAEESSDGDRVDKQAHHRREVMA 342 A + G++C LP + LKER G++ G P A AE DG + KQ + Sbjct: 1278 APLEGLICRALPRGSPHSDLKERTVLSGSIMQGTPRATAESFEDGLKYPKQIKRESPPIR 1337 Query: 341 A*ALAASTHEEARDPGELVCCVATSV-DIGGEDTRGGEHAHEPPEVGELRRVDPCIGGKI 165 A A T + D + + S+ +I +D E + + PEV + R P I G I Sbjct: 1338 A-FEGAITKGKPYDGITTIKEMGRSIHEIPRQDILTQE-SRKTPEVVQSTR--PIIEGSI 1393 Query: 164 RQGGSTPPEVD 132 QG TP + D Sbjct: 1394 SQG--TPIKFD 1402
>MIA40_ASHGO (Q757A5) Intermembrane space import and assembly protein 40,| mitochondrial precursor (Mitochondrial import inner membrane translocase TIM40) Length = 266 Score = 30.0 bits (66), Expect = 4.4 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Frame = -2 Query: 425 GEPLAYAEESSD-----GDRVDKQAHHRREVMAA*ALAASTHEEARDPGELVCCVATSVD 261 GE AY EES ++ A E A A A T E+A + + A Sbjct: 105 GEEEAYGEESGAVNEEAAGEPEEAAAEVGETQAEQAPAVET-EQAAEAEQAAEAAAEDKA 163 Query: 260 IGGEDTRGGEHAHEPPEVGELRRVDPCIGG 171 GE +G + A+ P + GE+ PC+GG Sbjct: 164 SAGEAAQGQQGAYNP-DTGEINWDCPCLGG 192
>PPS3_BACSU (P39847) Peptide synthetase 3| Length = 2555 Score = 30.0 bits (66), Expect = 4.4 Identities = 23/82 (28%), Positives = 31/82 (37%) Frame = +3 Query: 153 ATLSDLAADTGIYPTKLSHLRWLMRVLTTSGVFSADVNASGDTTYKLTRVSRLLVGAGGE 332 A L +AA +G + W G+ VN S D + G Sbjct: 238 AELQKIAAASGATLNTVFQALW--------GIMLQKVNRSSDAVFGSV--------ISGR 281 Query: 333 SSRRHDLSPMVGLFVNPVPITA 398 S D+ MVGLF+N +PI A Sbjct: 282 PSELKDVENMVGLFINTIPIRA 303
>AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)| (AKAP 95) Length = 698 Score = 29.6 bits (65), Expect = 5.7 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 10/59 (16%) Frame = -2 Query: 275 ATSVDIGGEDTRGGEHAHEPPEV----------GELRRVDPCIGGKIRQGGSTPPEVDG 129 A +I G+DT GGE P EV +R VD G +G TPPE G Sbjct: 551 AVDPEIEGDDTLGGEKEETPEEVAAEVLAEVITAAVRAVDG-EGAPAPEGSDTPPEGQG 608
>CH10_PROMA (Q7TV92) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 103 Score = 29.3 bits (64), Expect = 7.5 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = -2 Query: 347 MAA*ALAASTHEEARDPGELVCCVATSVDIGGEDTRGG----EHAHEPPEVGELRRVDPC 180 MAA +L+ ST + D V V E T GG + A E P+VGE+ +V P Sbjct: 1 MAAVSLSVSTVKPLGDR------VFIKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGP- 53 Query: 179 IGGKIRQGGSTPPEVDGVGN 120 G + G PEV GVG+ Sbjct: 54 -GKRNDDGSRQAPEV-GVGD 71
>DHPS_HAEIN (P43776) Dihydropteroate synthase (EC 2.5.1.15) (DHPS)| (Dihydropteroate pyrophosphorylase) Length = 275 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = -2 Query: 275 ATSVDIGGEDTRGGEHAHEPPEVGELRRVDPCI 177 AT +DIGGE TR +A E E EL RV P + Sbjct: 52 ATIIDIGGESTR--PNADEVSEQEELHRVVPVV 82
>ZMS1_YEAST (P46974) Zinc finger protein ZMS1| Length = 1380 Score = 29.3 bits (64), Expect = 7.5 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 3/101 (2%) Frame = -3 Query: 376 TNKPTIGERSWRRELSPPAPTRRRETRVSLYVVSPLALTSAEKTPEVVSTRMSHRRWESF 197 T K G+ S EL + V L V +P+ EKTP + + R ++ Sbjct: 255 TPKNLAGKTS--EELKEAVVALAKSNNVELPVSAPVMNDKREKTPPSKAGSLGFREFKFS 312 Query: 196 VG*IPVSAARSDKV---AAPPLRWMASGMRRSVAAPSAMDF 83 +PV +A SD V A P + S +A SAM + Sbjct: 313 TKGVPVHSASSDAVIDRANTPSSMHKTKRHASFSASSAMTY 353
>MURA1_BACLD (Q65DX8) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC| 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) Length = 436 Score = 28.9 bits (63), Expect = 9.7 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -2 Query: 251 EDTRGGEHAHEPPEVGELRRVDPCIGGKIRQGGSTPPEVDGV 126 E T E+A + PE+ +L +GGKIR G+ +++GV Sbjct: 179 EGTTTLENAAKEPEIVDLANYINAMGGKIRGAGTGTIKIEGV 220
>ISW1_CAEEL (P41877) Chromatin remodelling complex ATPase chain isw-1 (EC| 3.6.1.-) Length = 1009 Score = 28.9 bits (63), Expect = 9.7 Identities = 18/92 (19%), Positives = 41/92 (44%) Frame = +3 Query: 195 TKLSHLRWLMRVLTTSGVFSADVNASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLF 374 T+L L W ++ + + + +T +L +RLL+ + H+L ++ F Sbjct: 247 TQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLN-F 305 Query: 375 VNPVPITALFSIREWFTDEKSTASSSLFEVAH 470 + P T+ WF+++ + ++ L + H Sbjct: 306 LLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLH 337
>DPOL_WHV2 (P06275) P protein [Includes: DNA-directed DNA polymerase (EC| 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 883 Score = 28.9 bits (63), Expect = 9.7 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Frame = +3 Query: 60 YHHC--FVYVKSMALGAATDLRIPDAIHLRGGAATLSDLAADTGIYPTKL--SHLRWLMR 227 + HC F Y+ + LGA T + AI+ + L DL + TK +HL ++ Sbjct: 579 FPHCVVFAYMDDLVLGARTSEHLT-AIYSHICSVFL-DLGIHLNVNKTKWWGNHLHFMGY 636 Query: 228 VLTTSGVFSADVNASGDTTYKLT 296 V+T+SGV D + + Y L+ Sbjct: 637 VITSSGVLPQDKHVKKISRYLLS 659
>IMT1_MESCR (P45986) Inositol 4-methyltransferase (EC 2.1.1.129)| Length = 365 Score = 28.9 bits (63), Expect = 9.7 Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 6/156 (3%) Frame = +3 Query: 90 MALGAATDLRIPDAIHLRGGAA--TLSDLAADTGIY-PTKLSHLRWLMRVLTTSGVFSAD 260 M L +A +L+I D G + S++A+ G P L ++R+L + V + Sbjct: 36 MILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCK 95 Query: 261 VN---ASGDTTYKLTRVSRLLVGAGGESSRRHDLSPMVGLFVNPVPITALFSIREWFTDE 431 + Y + L G+ S L P++ L + V + + F + ++ + Sbjct: 96 LQKGEGGSQRVYGPAPLCNYLASNDGQGS----LGPLLVLHHDKVMMESWFHLNDYILE- 150 Query: 432 KSTASSSLFEVAHGCTRWEMIAKDAGDDRLFNAGMA 539 F+ AHG +++ D + +FN GMA Sbjct: 151 ----GGVPFKRAHGMIQFDYTGTDERFNHVFNQGMA 182 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,030,320 Number of Sequences: 219361 Number of extensions: 1847876 Number of successful extensions: 6345 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 5858 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6327 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
