ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3c18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
2dbj|AK101295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
3dbj|AK099037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
4dbj|AK072237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
5dbj|AK068584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 129 1e-26
7emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005... 129 1e-26
8gb|AY110496.1| Zea mays CL30719_1 mRNA sequence 60 9e-06
9gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, comple... 44 0.56
10gb|AC115110.3| Homo sapiens BAC clone RP11-192P23 from 4, comple... 42 2.2
11gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, compl... 42 2.2
12gb|BC047577.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypepti... 42 2.2
13gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell ... 42 2.2
14dbj|AK056726.1| Homo sapiens cDNA FLJ32164 fis, clone PLACE60003... 42 2.2
15gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell ... 42 2.2
16gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 o... 42 2.2
17emb|AL050232.2|DMBH48F19 Drosophila melanogaster BAC clone BACH4... 42 2.2
18gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 8.8
19gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, comp... 40 8.8
20ref|XM_822085.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.8
21gb|AC015751.10| Homo sapiens chromosome 17, clone RP11-1J8, comp... 40 8.8
22emb|AL732369.6| Human DNA sequence from clone RP13-107M13 on chr... 40 8.8
23emb|AL645944.11| Human DNA sequence from clone RP11-179G8 on chr... 40 8.8
24emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chr... 40 8.8
25gb|AC027233.7| Homo sapiens chromosome 17, clone RP11-205P19, co... 40 8.8
26gb|AC092632.2| Homo sapiens BAC clone RP11-337B18 from 2, comple... 40 8.8 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Minus

                                                                           
Query: 431     gaattccgcaggcttatggctgatcgtcatgctttagctgaggaacgaatggagttgcac 490
               |||||| | ||||||||||| ||||  | |||| | ||||| |||||  |||  || |||
Sbjct: 4757470 gaattcaggaggcttatggcagatcaccgtgctcttgctgaagaacgtttggccttacac 4757411

                                                                           
Query: 491     agggagttgcaagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagatt 550
                |||| || ||||||||||| || |||||||||||| |||||  |||||| ||||| || 
Sbjct: 4757410 cgggaattacaagctggaaaagatgaggtccgtcacttgaacacgatcattgcagacatc 4757351

                                                                           
Query: 551     aatgtcaagaaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagct 610
               | || |||||||||| |||||||| | ||||| |||||||| || ||||| |||||||||
Sbjct: 4757350 agtgccaagaaggaaacttatatcggtgagcttgttgacaaaaggaggaaacttgaagct 4757291

                                                
Query: 611     gaacttagatcaaatgagcctttgagagatgag 643
               ||||||||| |||||||| |||| |||||||||
Sbjct: 4757290 gaacttagagcaaatgagtctttaagagatgag 4757258



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 245     atccgtgtggttgatgatcgtaggggccatcatgagatccgtgtagt 291
               |||||||| |||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 4757659 atccgtgtagttgatgaacgtaggggctatcctgacatccgtgtagt 4757613



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                       
Query: 143     atcatgtcaggaagagatcgcctgccgcgccgttttgtcgaagatggaaggggcta 198
               |||||||||||||||||||| ||||| || || ||| | || ||||| ||||||||
Sbjct: 4757722 atcatgtcaggaagagatcgtctgccacgtcgctttatagaggatggcaggggcta 4757667
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>dbj|AK101295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033H14, full
           insert sequence
          Length = 1590

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Plus

                                                                       
Query: 431 gaattccgcaggcttatggctgatcgtcatgctttagctgaggaacgaatggagttgcac 490
           |||||| | ||||||||||| ||||  | |||| | ||||| |||||  |||  || |||
Sbjct: 380 gaattcaggaggcttatggcagatcaccgtgctcttgctgaagaacgtttggccttacac 439

                                                                       
Query: 491 agggagttgcaagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagatt 550
            |||| || ||||||||||| || |||||||||||| |||||  |||||| ||||| || 
Sbjct: 440 cgggaattacaagctggaaaagatgaggtccgtcacttgaacacgatcattgcagacatc 499

                                                                       
Query: 551 aatgtcaagaaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagct 610
           | || |||||||||| |||||||| | ||||| |||||||| || ||||| |||||||||
Sbjct: 500 agtgccaagaaggaaacttatatcggtgagcttgttgacaaaaggaggaaacttgaagct 559

                                            
Query: 611 gaacttagatcaaatgagcctttgagagatgag 643
           ||||||||| |||||||| |||| |||||||||
Sbjct: 560 gaacttagagcaaatgagtctttaagagatgag 592



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 245 atccgtgtggttgatgatcgtaggggccatcatgagatccgtgtagt 291
           |||||||| |||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 191 atccgtgtagttgatgaacgtaggggctatcctgacatccgtgtagt 237



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 143 atcatgtcaggaagagatcgcctgccgcgccgttttgtcgaagatggaaggggcta 198
           |||||||||||||||||||| ||||| || || ||| | || ||||| ||||||||
Sbjct: 128 atcatgtcaggaagagatcgtctgccacgtcgctttatagaggatggcaggggcta 183
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>dbj|AK099037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132N07, full
           insert sequence
          Length = 4390

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Plus

                                                                       
Query: 431 gaattccgcaggcttatggctgatcgtcatgctttagctgaggaacgaatggagttgcac 490
           |||||| | ||||||||||| ||||  | |||| | ||||| |||||  |||  || |||
Sbjct: 468 gaattcaggaggcttatggcagatcaccgtgctcttgctgaagaacgtttggccttacac 527

                                                                       
Query: 491 agggagttgcaagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagatt 550
            |||| || ||||||||||| || |||||||||||| |||||  |||||| ||||| || 
Sbjct: 528 cgggaattacaagctggaaaagatgaggtccgtcacttgaacacgatcattgcagacatc 587

                                                                       
Query: 551 aatgtcaagaaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagct 610
           | || |||||||||| |||||||| | ||||| |||||||| || ||||| |||||||||
Sbjct: 588 agtgccaagaaggaaacttatatcggtgagcttgttgacaaaaggaggaaacttgaagct 647

                                            
Query: 611 gaacttagatcaaatgagcctttgagagatgag 643
           ||||||||| |||||||| |||| |||||||||
Sbjct: 648 gaacttagagcaaatgagtctttaagagatgag 680



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 245 atccgtgtggttgatgatcgtaggggccatcatgagatccgtgtagt 291
           |||||||| |||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 279 atccgtgtagttgatgaacgtaggggctatcctgacatccgtgtagt 325



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 143 atcatgtcaggaagagatcgcctgccgcgccgttttgtcgaagatggaaggggcta 198
           |||||||||||||||||||| ||||| || || ||| | || ||||| ||||||||
Sbjct: 216 atcatgtcaggaagagatcgtctgccacgtcgctttatagaggatggcaggggcta 271
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>dbj|AK072237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002H11, full
           insert sequence
          Length = 1472

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Plus

                                                                       
Query: 431 gaattccgcaggcttatggctgatcgtcatgctttagctgaggaacgaatggagttgcac 490
           |||||| | ||||||||||| ||||  | |||| | ||||| |||||  |||  || |||
Sbjct: 467 gaattcaggaggcttatggcagatcaccgtgctcttgctgaagaacgtttggccttacac 526

                                                                       
Query: 491 agggagttgcaagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagatt 550
            |||| || ||||||||||| || |||||||||||| |||||  |||||| ||||| || 
Sbjct: 527 cgggaattacaagctggaaaagatgaggtccgtcacttgaacacgatcattgcagacatc 586

                                                                       
Query: 551 aatgtcaagaaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagct 610
           | || |||||||||| |||||||| | ||||| |||||||| || ||||| |||||||||
Sbjct: 587 agtgccaagaaggaaacttatatcggtgagcttgttgacaaaaggaggaaacttgaagct 646

                                            
Query: 611 gaacttagatcaaatgagcctttgagagatgag 643
           ||||||||| |||||||| |||| |||||||||
Sbjct: 647 gaacttagagcaaatgagtctttaagagatgag 679



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 245 atccgtgtggttgatgatcgtaggggccatcatgagatccgtgtagt 291
           |||||||| |||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 278 atccgtgtagttgatgaacgtaggggctatcctgacatccgtgtagt 324



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 143 atcatgtcaggaagagatcgcctgccgcgccgttttgtcgaagatggaaggggcta 198
           |||||||||||||||||||| ||||| || || ||| | || ||||| ||||||||
Sbjct: 215 atcatgtcaggaagagatcgtctgccacgtcgctttatagaggatggcaggggcta 270
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>dbj|AK068584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157P20, full
           insert sequence
          Length = 1664

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Plus

                                                                       
Query: 431 gaattccgcaggcttatggctgatcgtcatgctttagctgaggaacgaatggagttgcac 490
           |||||| | ||||||||||| ||||  | |||| | ||||| |||||  |||  || |||
Sbjct: 514 gaattcaggaggcttatggcagatcaccgtgctcttgctgaagaacgtttggccttacac 573

                                                                       
Query: 491 agggagttgcaagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagatt 550
            |||| || ||||||||||| || |||||||||||| |||||  |||||| ||||| || 
Sbjct: 574 cgggaattacaagctggaaaagatgaggtccgtcacttgaacacgatcattgcagacatc 633

                                                                       
Query: 551 aatgtcaagaaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagct 610
           | || |||||||||| |||||||| | ||||| |||||||| || ||||| |||||||||
Sbjct: 634 agtgccaagaaggaaacttatatcggtgagcttgttgacaaaaggaggaaacttgaagct 693

                                            
Query: 611 gaacttagatcaaatgagcctttgagagatgag 643
           ||||||||| |||||||| |||| |||||||||
Sbjct: 694 gaacttagagcaaatgagtctttaagagatgag 726



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 245 atccgtgtggttgatgatcgtaggggccatcatgagatccgtgtagt 291
           |||||||| |||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 325 atccgtgtagttgatgaacgtaggggctatcctgacatccgtgtagt 371



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 143 atcatgtcaggaagagatcgcctgccgcgccgttttgtcgaagatggaaggggcta 198
           |||||||||||||||||||| ||||| || || ||| | || ||||| ||||||||
Sbjct: 262 atcatgtcaggaagagatcgtctgccacgtcgctttatagaggatggcaggggcta 317
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Minus

                                                                           
Query: 431     gaattccgcaggcttatggctgatcgtcatgctttagctgaggaacgaatggagttgcac 490
               |||||| | ||||||||||| ||||  | |||| | ||||| |||||  |||  || |||
Sbjct: 4757451 gaattcaggaggcttatggcagatcaccgtgctcttgctgaagaacgtttggccttacac 4757392

                                                                           
Query: 491     agggagttgcaagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagatt 550
                |||| || ||||||||||| || |||||||||||| |||||  |||||| ||||| || 
Sbjct: 4757391 cgggaattacaagctggaaaagatgaggtccgtcacttgaacacgatcattgcagacatc 4757332

                                                                           
Query: 551     aatgtcaagaaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagct 610
               | || |||||||||| |||||||| | ||||| |||||||| || ||||| |||||||||
Sbjct: 4757331 agtgccaagaaggaaacttatatcggtgagcttgttgacaaaaggaggaaacttgaagct 4757272

                                                
Query: 611     gaacttagatcaaatgagcctttgagagatgag 643
               ||||||||| |||||||| |||| |||||||||
Sbjct: 4757271 gaacttagagcaaatgagtctttaagagatgag 4757239



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 245     atccgtgtggttgatgatcgtaggggccatcatgagatccgtgtagt 291
               |||||||| |||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 4757640 atccgtgtagttgatgaacgtaggggctatcctgacatccgtgtagt 4757594



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                       
Query: 143     atcatgtcaggaagagatcgcctgccgcgccgttttgtcgaagatggaaggggcta 198
               |||||||||||||||||||| ||||| || || ||| | || ||||| ||||||||
Sbjct: 4757703 atcatgtcaggaagagatcgtctgccacgtcgctttatagaggatggcaggggcta 4757648
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>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161762

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/213 (82%)
 Strand = Plus / Plus

                                                                         
Query: 431   gaattccgcaggcttatggctgatcgtcatgctttagctgaggaacgaatggagttgcac 490
             |||||| | ||||||||||| ||||  | |||| | ||||| |||||  |||  || |||
Sbjct: 89661 gaattcaggaggcttatggcagatcaccgtgctcttgctgaagaacgtttggccttacac 89720

                                                                         
Query: 491   agggagttgcaagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagatt 550
              |||| || ||||||||||| || |||||||||||| |||||  |||||| ||||| || 
Sbjct: 89721 cgggaattacaagctggaaaagatgaggtccgtcacttgaacacgatcattgcagacatc 89780

                                                                         
Query: 551   aatgtcaagaaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagct 610
             | || |||||||||| |||||||| | ||||| |||||||| || ||||| |||||||||
Sbjct: 89781 agtgccaagaaggaaacttatatcggtgagcttgttgacaaaaggaggaaacttgaagct 89840

                                              
Query: 611   gaacttagatcaaatgagcctttgagagatgag 643
             ||||||||| |||||||| |||| |||||||||
Sbjct: 89841 gaacttagagcaaatgagtctttaagagatgag 89873



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 245   atccgtgtggttgatgatcgtaggggccatcatgagatccgtgtagt 291
             |||||||| |||||||| ||||||||| ||| ||| |||||||||||
Sbjct: 89472 atccgtgtagttgatgaacgtaggggctatcctgacatccgtgtagt 89518



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 143   atcatgtcaggaagagatcgcctgccgcgccgttttgtcgaagatggaaggggcta 198
             |||||||||||||||||||| ||||| || || ||| | || ||||| ||||||||
Sbjct: 89409 atcatgtcaggaagagatcgtctgccacgtcgctttatagaggatggcaggggcta 89464
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>gb|AY110496.1| Zea mays CL30719_1 mRNA sequence
          Length = 1192

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 105/130 (80%)
 Strand = Plus / Plus

                                                                       
Query: 500 caagctggaaaggaggaggtccgtcacctgaacttgatcatcgcagagattaatgtcaag 559
           ||||||||||| || |||||||| ||| ||||  ||||||| || || |||||     ||
Sbjct: 375 caagctggaaaagatgaggtccgccacttgaatgtgatcattgctgacattaacactgag 434

                                                                       
Query: 560 aaggaagcttatatcagcgagctcgttgacaagagaaggaagcttgaagctgaacttaga 619
           || ||||||||||||||  ||||  | |||| ||| ||||||||||||||||||||| ||
Sbjct: 435 aaagaagcttatatcagtaagcttatggacacgaggaggaagcttgaagctgaacttgga 494

                     
Query: 620 tcaaatgagc 629
            ||| |||||
Sbjct: 495 gcaagtgagc 504
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>gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, complete sequence
          Length = 186601

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 138   gcatcatcatgtcaggaagaga 159
             ||||||||||||||||||||||
Sbjct: 68774 gcatcatcatgtcaggaagaga 68753
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>gb|AC115110.3| Homo sapiens BAC clone RP11-192P23 from 4, complete sequence
          Length = 171128

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   ttctgaaggccatcaggatac 134
             |||||||||||||||||||||
Sbjct: 69022 ttctgaaggccatcaggatac 69042
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>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence
          Length = 179947

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 616    tagatcaaatgagcctttgag 636
              |||||||||||||||||||||
Sbjct: 124583 tagatcaaatgagcctttgag 124563
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>gb|BC047577.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15, mRNA (cDNA
            clone IMAGE:4814516), complete cds
          Length = 3041

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  ttctgaaggccatcaggatac 134
            |||||||||||||||||||||
Sbjct: 1719 ttctgaaggccatcaggatac 1699
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>gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 182490

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 264  gtaggggccatcatgagatcc 284
            |||||||||||||||||||||
Sbjct: 2918 gtaggggccatcatgagatcc 2938
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>dbj|AK056726.1| Homo sapiens cDNA FLJ32164 fis, clone PLACE6000379, highly similar
           to PUTATIVE PRE-MRNA SPLICING FACTOR RNA HELICASE
          Length = 2015

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 114 ttctgaaggccatcaggatac 134
           |||||||||||||||||||||
Sbjct: 704 ttctgaaggccatcaggatac 684
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>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 161668

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    gtaggggccatcatgagatcc 284
              |||||||||||||||||||||
Sbjct: 157556 gtaggggccatcatgagatcc 157576
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>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
              sequence
          Length = 315092

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    gtaggggccatcatgagatcc 284
              |||||||||||||||||||||
Sbjct: 140923 gtaggggccatcatgagatcc 140943
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>emb|AL050232.2|DMBH48F19 Drosophila melanogaster BAC clone BACH48F19
          Length = 11468

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 264  gtaggggccatcatgagatcc 284
            |||||||||||||||||||||
Sbjct: 2824 gtaggggccatcatgagatcc 2844
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 152     ggaagagatcgcctgccgcg 171
               ||||||||||||||||||||
Sbjct: 2417907 ggaagagatcgcctgccgcg 2417888
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>gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, complete sequence
          Length = 157064

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   ttaatgtcaagaaggaagct 568
             ||||||||||||||||||||
Sbjct: 90572 ttaatgtcaagaaggaagct 90553
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>ref|XM_822085.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.211.0370)
           partial mRNA
          Length = 813

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  gttcccattccacctcgtca 70
           ||||||||||||||||||||
Sbjct: 145 gttcccattccacctcgtca 164
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>gb|AC015751.10| Homo sapiens chromosome 17, clone RP11-1J8, complete sequence
          Length = 104948

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 595   aaggaagcttgaagctgaac 614
             ||||||||||||||||||||
Sbjct: 17104 aaggaagcttgaagctgaac 17085
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>emb|AL732369.6| Human DNA sequence from clone RP13-107M13 on chromosome X Contains
            part of a novel gene and a CpG island, complete sequence
          Length = 44438

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 546  agattaatgtcaagaaggaa 565
            ||||||||||||||||||||
Sbjct: 3504 agattaatgtcaagaaggaa 3485
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>emb|AL645944.11| Human DNA sequence from clone RP11-179G8 on chromosome 1, complete
             sequence
          Length = 191247

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   gtttctgaaggccatcagga 131
             ||||||||||||||||||||
Sbjct: 13325 gtttctgaaggccatcagga 13344
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>emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chromosome 1p34.3-36.11,
             complete sequence
          Length = 80387

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   gtttctgaaggccatcagga 131
             ||||||||||||||||||||
Sbjct: 71662 gtttctgaaggccatcagga 71681
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>gb|AC027233.7| Homo sapiens chromosome 17, clone RP11-205P19, complete sequence
          Length = 174937

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   aaggaagcttgaagctgaac 614
             ||||||||||||||||||||
Sbjct: 50442 aaggaagcttgaagctgaac 50461
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>gb|AC092632.2| Homo sapiens BAC clone RP11-337B18 from 2, complete sequence
          Length = 199385

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   gaaggaagcttgaagctgaa 613
             ||||||||||||||||||||
Sbjct: 66273 gaaggaagcttgaagctgaa 66254


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,300,791
Number of Sequences: 3902068
Number of extensions: 4300791
Number of successful extensions: 71099
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71000
Number of HSP's gapped (non-prelim): 98
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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