>MRTFA_XENLA (Q8AYC2) Myocardin-related transcription factor A (MRTF-A)|
           (xMRTF-A)
          Length = 936

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 18/48 (37%), Positives = 32/48 (66%)
 Frame = -1

Query: 581 LVQGSILNNLGCQNVEPLLQIHADQRWHLRKQALCSESQQVVHHYLPS 438
           LV G++L+ L   N++P+L ++  Q+WH   +AL S  +Q+VH+  P+
Sbjct: 668 LVPGTVLS-LSSSNLQPMLNMNGFQKWH--GEALDSLQKQLVHNESPA 712

>DPEP3_MOUSE (Q9DA79) Dipeptidase 3 precursor (EC 3.4.13.19) (Membrane-bound|
           dipeptidase 3) (MBD-3)
          Length = 493

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +2

Query: 374 IPSNSMSTTYEFVQPVEMPTSSWASNGAPLVGSPNTMPAFSGAISDPRV---SAAMVPHF 544
           +PS  ++ T     P   PT+  ASN     G PN   A SG  SDPR+   + A++  F
Sbjct: 30  VPSLWVTCTLTTPSPSSAPTTPEASNATTAPGIPND-TATSGVTSDPRLREQALALMRDF 88

Query: 545 GSPD-YSKLILEQEKLLMMGLNNVHL 619
              D ++ L L   +L    L +V+L
Sbjct: 89  PLVDGHNDLPLLLRELFQNQLQDVNL 114

>PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP) (Chondroitin sulfate
            proteoglycan core protein 1) [Contains: Aggrecan core
            protein 2]
          Length = 2415

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 350  GFNGRQEAIPSNSMSTTYEFVQPVEMPTSSWASNGAP-LVGSPNTMPAFSGAIS 508
            G +  Q  +   +    Y   QP  +   S  ++G P L G P+ +P FSGA S
Sbjct: 1642 GLSSGQPGVSGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGFSGATS 1695

>NOL6_MOUSE (Q8R5K4) Nucleolar protein 6 (Nucleolar RNA-associated protein)|
           (Nrap)
          Length = 1141

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = +2

Query: 89  LGAMQSGVQLCSEGEDDE--EIVFKPTVSEKLP---KVRTELPVNGYIQPVQMS 235
           +G   +G Q     ED E  E+ F+    EK P   + RTE P  G +QPV +S
Sbjct: 1   MGPAPAGEQHRRATEDPEVMELAFEGMDKEKAPSRKRARTEPPAEGLLQPVNLS 54

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -3

Query: 210 PLTGSSVRTFGSFSDTVGLKTISSSSSPSEHNCTPDCIAPRLVATASNLLPISCASSTTF 31
           PLT ++  T  S S T      SS    S  + TP   A    AT+++  P+S  +STT 
Sbjct: 390 PLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTA 449

Query: 30  GSGA 19
            S +
Sbjct: 450 TSAS 453

>VACA_HELPJ (Q9ZKW5) Vacuolating cytotoxin precursor|
          Length = 1288

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
 Frame = +2

Query: 359  GRQEAIPSNSMSTTYEFVQPVEMPTSSWAS--NGAPLVGSPNTMPAFSGAISDPRVSA-- 526
            G++ A   ++    Y+F    E PT+ WA+   GA L    N     + A  D  ++   
Sbjct: 996  GQEFASLESAAEVLYQFAPKYEKPTNVWANAIGGASLNSGSNASLYGTSAGVDAFLNGNV 1055

Query: 527  -AMVPHFGSPDYSKLILEQEKLLMMGLNNVH 616
             A+V  FGS  YS     Q   L  G NN +
Sbjct: 1056 EAIVGGFGSYGYSS-FSNQANSLNSGANNAN 1085

>SYFB_ARATH (Q9SGE9) Probable phenylalanyl-tRNA synthetase beta chain (EC|
           6.1.1.20) (Phenylalanine--tRNA ligase beta chain)
           (PheRS)
          Length = 598

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 41  ELAHEIGNKFDAVATNLGAMQSGVQLCSEGEDDEEIVFKPTVSEKLP 181
           EL    G + D V T    ++    +  E +DDEEI++K  +    P
Sbjct: 26  ELCFSFGIELDDVTTEKAIIRKEKHIDEEADDDEEIIYKIEIPANRP 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,598,048
Number of Sequences: 219361
Number of extensions: 2104492
Number of successful extensions: 6452
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6439
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)