ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ310379.1|HVU310379 Hordeum vulgare mRNA for putative nucle... 789 0.0
2gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
3gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AK109325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
6ref|XM_475741.1| Oryza sativa (japonica cultivar-group), predic... 153 7e-34
7gb|AY112488.1| Zea mays CL43678_1 mRNA sequence 109 1e-20
8gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
9ref|XM_477770.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
11dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.49
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
15gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
16gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
17dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
18dbj|AK119700.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
19dbj|AK107900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
20dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
21emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 44 0.49
22ref|NM_001018111.1| Homo sapiens podocalyxin-like (PODXL), trans... 42 1.9
23ref|NM_005397.2| Homo sapiens podocalyxin-like (PODXL), transcri... 42 1.9
24emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes 42 1.9
25emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 42 1.9
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
27dbj|AK223573.1| Homo sapiens mRNA for podocalyxin-like precursor... 42 1.9
28gb|BC093730.1| Homo sapiens podocalyxin-like, mRNA (cDNA clone M... 42 1.9
29gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180... 42 1.9
30gb|BC042466.1| Homo sapiens, Similar to podocalyxin-like, clone ... 42 1.9
31emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27... 42 1.9
32gb|BC112035.1| Homo sapiens podocalyxin-like, transcript variant... 42 1.9
33gb|AY395058.1| Schistosoma mansoni ecdysone-induced protein E78 ... 42 1.9
34emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4,... 42 1.9
35gb|U97519.1|HSU97519 Homo sapiens podocalyxin-like protein mRNA,... 42 1.9
36ref|XM_550259.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.6
37ref|XM_469110.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.6
38ref|NM_183749.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
39gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E1... 40 7.6
40gb|AY022735.1| Oryza sativa microsatellite MRG5060 containing (C... 40 7.6
41gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
42gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J1... 40 7.6
43gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 7.6
44ref|XM_365538.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.6
45ref|XM_955849.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
46ref|XM_326877.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
47gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.6
48gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 7.6
49ref|XM_849855.1| PREDICTED: Canis familiaris similar to solute c... 40 7.6
50ref|XM_818417.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 h... 40 7.6
51emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch... 40 7.6
52gb|DQ145941.1| Homo sapiens globoside alpha-1,3-N-acetylgalactos... 40 7.6
53emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.6
54emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cos... 40 7.6
55emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in... 40 7.6
56gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.6
57gb|AE012064.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.6
58dbj|AK132685.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 7.6
59gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene c... 40 7.6
60gb|AF330255.1|AF330255 Hordeum vulgare possible membrane protein... 40 7.6
61dbj|AK020792.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 7.6
62dbj|AK078475.1| Mus musculus 12 days embryo female mullerian duc... 40 7.6
63dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
64dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
65dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
66dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
67dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
68gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.6
69dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.6
70gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genom... 40 7.6
71gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.6
72dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
73gb|AC145250.3| Macropus eugenii clone ME_KBa-232I1, complete seq... 40 7.6
74dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
75dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
76dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
77dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
78dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
79dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
80dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
81dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
82dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
83dbj|AK120658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
84dbj|AK072969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
85gb|AC151669.5| Mus musculus chromosome 5, clone RP23-44L13, comp... 40 7.6
86dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
87gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
88gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
89emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.6
90emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573... 40 7.6
91gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11... 40 7.6
92emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 7.6
93emb|AJ233625.1|OCU233625 Oryctolagus cuniculus endogenous retrov... 40 7.6
94gb|L23501.1|HUMKPRWI Homo sapiens Prader-Willi chromosome DNA fr... 40 7.6 
>emb|AJ310379.1|HVU310379 Hordeum vulgare mRNA for putative nuclear protein (s40 gene)
          Length = 417

 Score =  789 bits (398), Expect = 0.0
 Identities = 405/406 (99%), Gaps = 1/406 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggagctccaagaagccgacgtcctctggcc-cactacaactccgagcaccgccgcgacgg 59
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12  ggagctccaagaagccgacgtcctctggccacactacaactccgagcaccgccgcgacgg 71

                                                                       
Query: 60  cgacgacggcagcaacgtcgacggagacatcgccaaggtgtccccgccggagctgtctgc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  cgacgacggcagcaacgtcgacggagacatcgccaaggtgtccccgccggagctgtctgc 131

                                                                       
Query: 120 cccggtcctcgtgcctctccggaagcggcggtctcgatcctggacggcgtcgtccgacgg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cccggtcctcgtgcctctccggaagcggcggtctcgatcctggacggcgtcgtccgacgg 191

                                                                       
Query: 180 gagcggcagtggcaacgacgactgcagcgacggcgacgtccgatgtaccaacgacgcgaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gagcggcagtggcaacgacgactgcagcgacggcgacgtccgatgtaccaacgacgcgaa 251

                                                                       
Query: 240 gaggaacgtgccgccccacgtcctggccgagcgacggcggaggctcgccgggaggtcgac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaggaacgtgccgccccacgtcctggccgagcgacggcggaggctcgccgggaggtcgac 311

                                                                       
Query: 300 ggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccgcaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccgcaa 371

                                                         
Query: 360 tatcaggaacctcgtcctcaggatgaccggattcatcgagaagtga 405
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tatcaggaacctcgtcctcaggatgaccggattcatcgagaagtga 417
to top
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E05, complete sequence
          Length = 196284

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                         
Query: 297   gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 356
             ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 12897 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 12956

                                                               
Query: 357   caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 406
             |||  |||||||||||||||||  ||||||||||||||||||||| ||||
Sbjct: 12957 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 13006
to top
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
             complete sequence
          Length = 94399

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                         
Query: 297   gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 356
             ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 79189 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 79248

                                                               
Query: 357   caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 406
             |||  |||||||||||||||||  ||||||||||||||||||||| ||||
Sbjct: 79249 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 79298
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                            
Query: 297      gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 356
                ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 26161849 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 26161908

                                                                  
Query: 357      caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 406
                |||  |||||||||||||||||  ||||||||||||||||||||| ||||
Sbjct: 26161909 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 26161958



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 1        ggagctccaagaagccgacgtcctctggcc 30
                |||| |||||||||||||||||||||||||
Sbjct: 25548277 ggagttccaagaagccgacgtcctctggcc 25548306
to top
>dbj|AK109325.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H07, full
           insert sequence
          Length = 744

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                       
Query: 297 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 356
           ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 366 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 425

                                                             
Query: 357 caatatcaggaacctcgtcctcaggatgaccggattcatcgagaagtgaa 406
           |||  |||||||||||||||||  ||||||||||||||||||||| ||||
Sbjct: 426 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaaatgaa 475
to top
>ref|XM_475741.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 429

 Score =  153 bits (77), Expect = 7e-34
 Identities = 98/105 (93%)
 Strand = Plus / Plus

                                                                       
Query: 297 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 356
           ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gacggcggcgtactccatgtgcgccggcaaggggaggacgctcaaagggcgggacctccg 380

                                                        
Query: 357 caatatcaggaacctcgtcctcaggatgaccggattcatcgagaa 401
           |||  |||||||||||||||||  |||||||||||||||||||||
Sbjct: 381 caacgtcaggaacctcgtcctccagatgaccggattcatcgagaa 425
to top
>gb|AY112488.1| Zea mays CL43678_1 mRNA sequence
          Length = 595

 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                       
Query: 297 gacggcggcctactccatgtgcaccggcaaagggaggacgctcaaagggcgggacctccg 356
           |||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||
Sbjct: 350 gacggcggcctactccatgtgcgctggcaaggggaggacgctcaaagggcgcgacctccg 291

                                                      
Query: 357 caatatcaggaacctcgtcctcaggatgaccggattcatcgag 399
           | |  || || |||||||||||| |||||| || |||||||||
Sbjct: 290 cgacgtccgggacctcgtcctcaagatgacaggcttcatcgag 248
to top
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
             complete sequence
          Length = 169073

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 1     ggagctccaagaagccgacgtcctctggcc 30
             |||| |||||||||||||||||||||||||
Sbjct: 64684 ggagttccaagaagccgacgtcctctggcc 64713
to top
>ref|XM_477770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 474

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 187 agtggcaacgacgactgcagcgacggcgacg 217
           |||||| |||||||||| |||||||||||||
Sbjct: 80  agtggcgacgacgactggagcgacggcgacg 110
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 187      agtggcaacgacgactgcagcgacggcgacg 217
                |||||| |||||||||| |||||||||||||
Sbjct: 14042394 agtggcgacgacgactggagcgacggcgacg 14042424
to top
>dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1423_A11
          Length = 98377

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 187   agtggcaacgacgactgcagcgacggcgacg 217
             |||||| |||||||||| |||||||||||||
Sbjct: 18353 agtggcgacgacgactggagcgacggcgacg 18383
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 328    gggaggacgctcaaagggcgggacctccgc 357
              |||||||||||||| ||||| |||||||||
Sbjct: 760048 gggaggacgctcaaggggcgcgacctccgc 760077



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 194      acgacgactgcagcgacggcgacg 217
                |||||||||| |||||||||||||
Sbjct: 25509327 acgacgactggagcgacggcgacg 25509304
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 42       cgagcaccgccgcgacggcgacgacg 67
                ||||||||||||| ||||||||||||
Sbjct: 13229381 cgagcaccgccgccacggcgacgacg 13229356



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 194      acgacgactgcagcgacggcgacg 217
                |||||||||| |||||||||||||
Sbjct: 15954079 acgacgactggagcgacggcgacg 15954056



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      gcgacggcgacgacggcagc 72
               ||||||||||||||||||||
Sbjct: 8505822 gcgacggcgacgacggcagc 8505803
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 328    gggaggacgctcaaagggcgggacctccgc 357
              |||||||||||||| ||||| |||||||||
Sbjct: 760046 gggaggacgctcaaggggcgcgacctccgc 760075



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 194      acgacgactgcagcgacggcgacg 217
                |||||||||| |||||||||||||
Sbjct: 25600636 acgacgactggagcgacggcgacg 25600613
to top
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090O10, complete sequence
          Length = 162132

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 328   gggaggacgctcaaagggcgggacctccgc 357
             |||||||||||||| ||||| |||||||||
Sbjct: 55593 gggaggacgctcaaggggcgcgacctccgc 55622
to top
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16,
              complete sequence
          Length = 160053

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 328    gggaggacgctcaaagggcgggacctccgc 357
              |||||||||||||| ||||| |||||||||
Sbjct: 145929 gggaggacgctcaaggggcgcgacctccgc 145958
to top
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0012F14
          Length = 168629

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 42     cgagcaccgccgcgacggcgacgacg 67
              ||||||||||||| ||||||||||||
Sbjct: 146569 cgagcaccgccgccacggcgacgacg 146544
to top
>dbj|AK119700.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D07, full
           insert sequence
          Length = 777

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 328 gggaggacgctcaaagggcgggacctccgc 357
           |||||||||||||| ||||| |||||||||
Sbjct: 626 gggaggacgctcaaggggcgcgacctccgc 655
to top
>dbj|AK107900.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F07, full
           insert sequence
          Length = 804

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 328 gggaggacgctcaaagggcgggacctccgc 357
           |||||||||||||| ||||| |||||||||
Sbjct: 626 gggaggacgctcaaggggcgcgacctccgc 655
to top
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full
           insert sequence
          Length = 1439

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 42  cgagcaccgccgcgacggcgacgacg 67
           ||||||||||||| ||||||||||||
Sbjct: 400 cgagcaccgccgccacggcgacgacg 375
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 51      ccgcgacggcgacgacggcagcaacg 76
               ||||||||||||||||| ||||||||
Sbjct: 1133198 ccgcgacggcgacgacgacagcaacg 1133223
to top
>ref|NM_001018111.1| Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA
          Length = 5999

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  gcgacggcgacgacggcagca 73
           |||||||||||||||||||||
Sbjct: 326 gcgacggcgacgacggcagca 306
to top
>ref|NM_005397.2| Homo sapiens podocalyxin-like (PODXL), transcript variant 2, mRNA
          Length = 5903

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  gcgacggcgacgacggcagca 73
           |||||||||||||||||||||
Sbjct: 326 gcgacggcgacgacggcagca 306
to top
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes
          Length = 37000

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 292   aggtcgacggcggcctactccatgt 316
             |||||||||||||||| ||||||||
Sbjct: 17529 aggtcgacggcggccttctccatgt 17553
to top
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 292   aggtcgacggcggcctactccatgt 316
             |||||||||||||||| ||||||||
Sbjct: 48329 aggtcgacggcggccttctccatgt 48353
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 190      ggcaacgacgactgcagcgacggcg 214
                |||||||||||||| ||||||||||
Sbjct: 11615976 ggcaacgacgactggagcgacggcg 11615952
to top
>dbj|AK223573.1| Homo sapiens mRNA for podocalyxin-like precursor variant, clone:
           FCC129D02
          Length = 2056

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  gcgacggcgacgacggcagca 73
           |||||||||||||||||||||
Sbjct: 326 gcgacggcgacgacggcagca 306
to top
>gb|BC093730.1| Homo sapiens podocalyxin-like, mRNA (cDNA clone MGC:120765
          IMAGE:7939575), complete cds
          Length = 1672

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 53 gcgacggcgacgacggcagca 73
          |||||||||||||||||||||
Sbjct: 96 gcgacggcgacgacggcagca 76
to top
>gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180C16, complete sequence
          Length = 162694

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    gcgacggcgacgacggcagca 73
             |||||||||||||||||||||
Sbjct: 65745 gcgacggcgacgacggcagca 65765
to top
>gb|BC042466.1| Homo sapiens, Similar to podocalyxin-like, clone IMAGE:5172924,
           mRNA
          Length = 6199

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  gcgacggcgacgacggcagca 73
           |||||||||||||||||||||
Sbjct: 280 gcgacggcgacgacggcagca 260
to top
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31]
          Length = 10500

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 292  aggtcgacggcggcctactccatgt 316
            |||||||||||||||| ||||||||
Sbjct: 3253 aggtcgacggcggccttctccatgt 3277
to top
>gb|BC112035.1| Homo sapiens podocalyxin-like, transcript variant 2, mRNA (cDNA
           clone MGC:138240 IMAGE:8327503), complete cds
          Length = 1684

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  gcgacggcgacgacggcagca 73
           |||||||||||||||||||||
Sbjct: 108 gcgacggcgacgacggcagca 88
to top
>gb|AY395058.1| Schistosoma mansoni ecdysone-induced protein E78 (E78) mRNA, complete
            cds
          Length = 1864

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 178  gggagcggcagtggcaacgac 198
            |||||||||||||||||||||
Sbjct: 1365 gggagcggcagtggcaacgac 1385
to top
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
             complete sequence
          Length = 164911

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 190   ggcaacgacgactgcagcgacggcg 214
             |||||||||||||| ||||||||||
Sbjct: 98986 ggcaacgacgactggagcgacggcg 98962
to top
>gb|U97519.1|HSU97519 Homo sapiens podocalyxin-like protein mRNA, complete cds
          Length = 5869

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 53  gcgacggcgacgacggcagca 73
           |||||||||||||||||||||
Sbjct: 326 gcgacggcgacgacggcagca 306
to top
>ref|XM_550259.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1929

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  ccgccgcgacggcgacgacg 67
           ||||||||||||||||||||
Sbjct: 99  ccgccgcgacggcgacgacg 118
to top
>ref|XM_469110.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 357

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 acgacgactgcagcgacggcgacg 217
           |||||||||| |||||||||||||
Sbjct: 284 acgacgactggagcgacggcgacg 307
to top
>ref|NM_183749.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 648

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 190 ggcaacgacgactgcagcgacggcgacg 217
           |||||||||||| | |||||||||||||
Sbjct: 525 ggcaacgacgaccggagcgacggcgacg 552
to top
>gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E13, complete sequence
          Length = 147087

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    aacgacgcgaagaggaacgt 248
              ||||||||||||||||||||
Sbjct: 125395 aacgacgcgaagaggaacgt 125414
to top
>gb|AY022735.1| Oryza sativa microsatellite MRG5060 containing (CCT)X8, genomic
          sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 48 ccgccgcgacggcgacgacg 67
          ||||||||||||||||||||
Sbjct: 3  ccgccgcgacggcgacgacg 22
to top
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0030I09 map C83B, complete sequence
          Length = 123477

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 328   gggaggacgctcaaagggcgggacctcc 355
             |||||||||||||| ||||| |||||||
Sbjct: 99265 gggaggacgctcaaggggcgcgacctcc 99238
to top
>gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J15, complete sequence
          Length = 164873

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    aacgacgcgaagaggaacgt 248
              ||||||||||||||||||||
Sbjct: 128046 aacgacgcgaagaggaacgt 128027
to top
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     aacgacgcgaagaggaacgt 248
               ||||||||||||||||||||
Sbjct: 1743144 aacgacgcgaagaggaacgt 1743163
to top
>ref|XM_365538.1| Magnaporthe grisea 70-15 hypothetical protein (MG02240.4) partial
           mRNA
          Length = 3444

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 atgtaccaacgacgcgaaga 241
           ||||||||||||||||||||
Sbjct: 970 atgtaccaacgacgcgaaga 989
to top
>ref|XM_955849.1| Neurospora crassa OR74A hypothetical protein (NCU01385.1) partial
           mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 ctgtctgccccggtcctcgt 131
           ||||||||||||||||||||
Sbjct: 299 ctgtctgccccggtcctcgt 280
to top
>ref|XM_326877.1| Neurospora crassa OR74A hypothetical protein (NCU01385.1) partial
           mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 ctgtctgccccggtcctcgt 131
           ||||||||||||||||||||
Sbjct: 299 ctgtctgccccggtcctcgt 280
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    caccgccgcgacggcgacga 65
             ||||||||||||||||||||
Sbjct: 52168 caccgccgcgacggcgacga 52187
to top
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 504    gcagaggtgaagaaagacaa 523
              ||||||||||||||||||||
Sbjct: 463339 gcagaggtgaagaaagacaa 463320
to top
>ref|XM_849855.1| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc
            transporter), member 3 isoform a (LOC612127), mRNA
          Length = 1129

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  cgaagaggaacgtgccgccc 255
            ||||||||||||||||||||
Sbjct: 1010 cgaagaggaacgtgccgccc 991
to top
>ref|XM_818417.1| Trypanosoma brucei TREU927 clone RPCI93-11J15 hypothetical protein
           (Tb927.8.5940) partial mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 aacgacgcgaagaggaacgt 248
           ||||||||||||||||||||
Sbjct: 716 aacgacgcgaagaggaacgt 735
to top
>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
              Contains the GTF3C5 gene for general transcription factor
              IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
              lipase (bile salt-stimulated lipase), the CELP gene for
              carboxyl ester lipase pseudogene, the RALGDS gene for ral
              guanine nucleotide dissociation stimulator, the gene for
              Forssman glycolipid synthetase (FS), three novel genes and
              six CpG islands, complete sequence
          Length = 152863

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 508    aggtgaagaaagacaagaga 527
              ||||||||||||||||||||
Sbjct: 144033 aggtgaagaaagacaagaga 144052
to top
>gb|DQ145941.1| Homo sapiens globoside alpha-1,3-N-acetylgalactosaminyltransferase
           1 (GBGT1) gene, complete cds
          Length = 14627

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 aggtgaagaaagacaagaga 527
           ||||||||||||||||||||
Sbjct: 477 aggtgaagaaagacaagaga 458
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 194    acgacgactgcagcgacggcgacg 217
              |||||||| |||||||||||||||
Sbjct: 150454 acgacgacggcagcgacggcgacg 150477
to top
>emb|AL451020.1|NC15E11 Neurospora crassa DNA linkage group V Cosmid contig 15E11
          Length = 79133

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   ctgtctgccccggtcctcgt 131
             ||||||||||||||||||||
Sbjct: 16717 ctgtctgccccggtcctcgt 16736
to top
>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2,
             complete sequence
          Length = 200950

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   ggtgagagcagaggtgaaga 516
             ||||||||||||||||||||
Sbjct: 51771 ggtgagagcagaggtgaaga 51790
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     gatcctggacggcgtcgtcc 174
               ||||||||||||||||||||
Sbjct: 4359611 gatcctggacggcgtcgtcc 4359630
to top
>gb|AE012064.1| Xanthomonas axonopodis pv. citri str. 306,  section 442 of 469 of the
            complete genome
          Length = 10412

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   cggcgacgacggcagcaacg 76
            ||||||||||||||||||||
Sbjct: 4237 cggcgacgacggcagcaacg 4256
to top
>dbj|AK132685.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921526M11 product:G protein-coupled
           receptor kinase 2, groucho gene related (Drosophila),
           full insert sequence
          Length = 2410

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  gcgacggcgacgacggcagc 72
           ||||||||||||||||||||
Sbjct: 320 gcgacggcgacgacggcagc 339
to top
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete
            sequence
          Length = 20300

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   cgccgcgacggcgacgacgg 68
            ||||||||||||||||||||
Sbjct: 8102 cgccgcgacggcgacgacgg 8121
to top
>gb|AF330255.1|AF330255 Hordeum vulgare possible membrane protein LEM1 (Lem1) gene, complete
            cds
          Length = 2772

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 45   gcaccgccgcgacggcgacgacggcagc 72
            |||||| ||||||| |||||||||||||
Sbjct: 1297 gcaccggcgcgacgacgacgacggcagc 1324
to top
>dbj|AK020792.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830025H08 product:G
           protein-coupled receptor kinase 2, groucho gene related
           (Drosophila), full insert sequence
          Length = 1226

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  gcgacggcgacgacggcagc 72
           ||||||||||||||||||||
Sbjct: 320 gcgacggcgacgacggcagc 339
to top
>dbj|AK078475.1| Mus musculus 12 days embryo female mullerian duct includes
           surrounding region cDNA, RIKEN full-length enriched
           library, clone:6820406D08 product:G protein-coupled
           receptor kinase 2, groucho gene related (Drosophila),
           full insert sequence
          Length = 3106

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  gcgacggcgacgacggcagc 72
           ||||||||||||||||||||
Sbjct: 191 gcgacggcgacgacggcagc 210
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      actgcagcgacggcgacgtc 219
                ||||||||||||||||||||
Sbjct: 24675425 actgcagcgacggcgacgtc 24675444



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 194     acgacgactgcagcgacggcgacg 217
               |||||||||| |||||||||||||
Sbjct: 6403092 acgacgactggagcgacggcgacg 6403069
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 328     gggaggacgctcaaagggcgggacctcc 355
               |||||||||||||| ||||| |||||||
Sbjct: 2523139 gggaggacgctcaaggggcgcgacctcc 2523166
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 48       ccgccgcgacggcgacgacg 67
                ||||||||||||||||||||
Sbjct: 21350729 ccgccgcgacggcgacgacg 21350748



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 48       ccgccgcgacggcgacgacg 67
                ||||||||||||||||||||
Sbjct: 18867171 ccgccgcgacggcgacgacg 18867152
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 67      ggcagcaacgtcgacggaga 86
               ||||||||||||||||||||
Sbjct: 2800825 ggcagcaacgtcgacggaga 2800844
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 190      ggcaacgacgactgcagcgacggcgacg 217
                |||||||||||| | |||||||||||||
Sbjct: 13144781 ggcaacgacgaccggagcgacggcgacg 13144754



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 190      ggcaacgacgactgcagcgacggcgacg 217
                |||||||||||| | |||||||||||||
Sbjct: 12034363 ggcaacgacgaccggagcgacggcgacg 12034390



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 48      ccgccgcgacggcgacgacg 67
               ||||||||||||||||||||
Sbjct: 3500191 ccgccgcgacggcgacgacg 3500210
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 42      cgagcaccgccgcgacggcg 61
               ||||||||||||||||||||
Sbjct: 3170983 cgagcaccgccgcgacggcg 3171002
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 249     gccgccccacgtcctggccg 268
               ||||||||||||||||||||
Sbjct: 8457494 gccgccccacgtcctggccg 8457475
to top
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete
             sequence
          Length = 117046

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 194   acgacgactgcagcgacggcgacg 217
             |||||||||| |||||||||||||
Sbjct: 25525 acgacgactggagcgacggcgacg 25548
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 48      ccgccgcgacggcgacgacg 67
               ||||||||||||||||||||
Sbjct: 2329422 ccgccgcgacggcgacgacg 2329441
to top
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0038K02
          Length = 118635

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    ccgccgcgacggcgacgacg 67
             ||||||||||||||||||||
Sbjct: 83108 ccgccgcgacggcgacgacg 83127
to top
>gb|AC145250.3| Macropus eugenii clone ME_KBa-232I1, complete sequence
          Length = 126347

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   gcagaggtgaagaaagacaa 523
             ||||||||||||||||||||
Sbjct: 13296 gcagaggtgaagaaagacaa 13277
to top
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1276_B06
          Length = 175174

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    ccgccgcgacggcgacgacg 67
             ||||||||||||||||||||
Sbjct: 68259 ccgccgcgacggcgacgacg 68278
to top
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0092H22
          Length = 165194

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gcgacggcgacgacggcagc 72
              ||||||||||||||||||||
Sbjct: 120523 gcgacggcgacgacggcagc 120504
to top
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1158F07
          Length = 139491

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 190    ggcaacgacgactgcagcgacggcgacg 217
              |||||||||||| | |||||||||||||
Sbjct: 120502 ggcaacgacgaccggagcgacggcgacg 120475
to top
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0487E11
          Length = 151303

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 190   ggcaacgacgactgcagcgacggcgacg 217
             |||||||||||| | |||||||||||||
Sbjct: 17082 ggcaacgacgaccggagcgacggcgacg 17055
to top
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1153F04
          Length = 158174

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 190  ggcaacgacgactgcagcgacggcgacg 217
            |||||||||||| | |||||||||||||
Sbjct: 1303 ggcaacgacgaccggagcgacggcgacg 1330
to top
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   acgacgactgcagcgacggcgacg 217
             |||||||||| |||||||||||||
Sbjct: 87528 acgacgactggagcgacggcgacg 87505
to top
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0028G04
          Length = 159761

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 190   ggcaacgacgactgcagcgacggcgacg 217
             |||||||||||| | |||||||||||||
Sbjct: 80027 ggcaacgacgaccggagcgacggcgacg 80054
to top
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 194    acgacgactgcagcgacggcgacg 217
              |||||||||| |||||||||||||
Sbjct: 167082 acgacgactggagcgacggcgacg 167059
to top
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0015A04
          Length = 152058

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    ggcagcaacgtcgacggaga 86
             ||||||||||||||||||||
Sbjct: 63974 ggcagcaacgtcgacggaga 63993
to top
>dbj|AK120658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E21, full
           insert sequence
          Length = 1929

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  ccgccgcgacggcgacgacg 67
           ||||||||||||||||||||
Sbjct: 99  ccgccgcgacggcgacgacg 118
to top
>dbj|AK072969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D16, full
           insert sequence
          Length = 964

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 328 gggaggacgctcaaagggcgggacctcc 355
           |||||||||||||| ||||| |||||||
Sbjct: 552 gggaggacgctcaaggggcgcgacctcc 579
to top
>gb|AC151669.5| Mus musculus chromosome 5, clone RP23-44L13, complete sequence
          Length = 254022

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gcgacggcgacgacggcagc 72
              ||||||||||||||||||||
Sbjct: 151985 gcgacggcgacgacggcagc 151966
to top
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0028E10
          Length = 140791

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    ccgccgcgacggcgacgacg 67
             ||||||||||||||||||||
Sbjct: 86951 ccgccgcgacggcgacgacg 86970
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 328     gggaggacgctcaaagggcgggacctcc 355
               |||||||||||||| ||||| |||||||
Sbjct: 2532170 gggaggacgctcaaggggcgcgacctcc 2532197
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      actgcagcgacggcgacgtc 219
                ||||||||||||||||||||
Sbjct: 24603631 actgcagcgacggcgacgtc 24603650



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 194     acgacgactgcagcgacggcgacg 217
               |||||||||| |||||||||||||
Sbjct: 6402967 acgacgactggagcgacggcgacg 6402944
to top
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109555

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   acgacgactgcagcgacggcgacg 217
             |||||||||| |||||||||||||
Sbjct: 64640 acgacgactggagcgacggcgacg 64617
to top
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 143895

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    actgcagcgacggcgacgtc 219
              ||||||||||||||||||||
Sbjct: 120291 actgcagcgacggcgacgtc 120310
to top
>gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11, complete sequence
          Length = 46305

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 508   aggtgaagaaagacaagaga 527
             ||||||||||||||||||||
Sbjct: 19955 aggtgaagaaagacaagaga 19936
to top
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 177     cgggagcggcagtggcaacgacga 200
               ||||||||||||||||| ||||||
Sbjct: 2945470 cgggagcggcagtggcagcgacga 2945493
to top
>emb|AJ233625.1|OCU233625 Oryctolagus cuniculus endogenous retroviral sequence ERV-L pol
           gene, clone ERV-L Rabbit1
          Length = 303

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 454 atggatgtgtgtgaaagcttgtgg 477
           ||||||| ||||||||||||||||
Sbjct: 294 atggatgagtgtgaaagcttgtgg 271
to top
>gb|L23501.1|HUMKPRWI Homo sapiens Prader-Willi chromosome DNA fragment
          Length = 2965

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 259  gtcctggccgagcgacggcggagg 282
            |||||||| |||||||||||||||
Sbjct: 2598 gtcctggctgagcgacggcggagg 2621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,349,932
Number of Sequences: 3902068
Number of extensions: 3349932
Number of successful extensions: 74100
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71654
Number of HSP's gapped (non-prelim): 2445
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top