ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3c04 |
|---|---|
| Clone Library Name | barley_pub |
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 304 bits (779), Expect = 1e-82 Identities = 151/151 (100%), Positives = 151/151 (100%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG Sbjct: 1 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 60 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE Sbjct: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 120 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 151
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 298 bits (762), Expect = 9e-81 Identities = 147/151 (97%), Positives = 150/151 (99%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAGMAPEGSQFDAK+YDSKMQELL+QGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 60 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VECQALVLAPTRE Sbjct: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRE 120 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 151
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 274 bits (701), Expect = 1e-73 Identities = 138/151 (91%), Positives = 143/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG+APEGSQFDA+ YD+KM ELL E +EFFTSYDEV+ESFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQQEFFTSYDEVYESFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF413_TOBAC (Q40466) Eukaryotic initiation factor 4A-13 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-13) (eIF-4A-13) (Fragment) Length = 355 Score = 274 bits (700), Expect = 1e-73 Identities = 137/151 (90%), Positives = 143/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 274 bits (700), Expect = 1e-73 Identities = 138/151 (91%), Positives = 142/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG+APEGSQFD K YD KMQE+L TE+FFTSYD+V ESFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDDKQYDKKMQEIL----TEDFFTSYDDVCESFDSMGLQENLLRGIYAYG 56 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE Sbjct: 57 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 116 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 117 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 147
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 274 bits (700), Expect = 1e-73 Identities = 137/151 (90%), Positives = 143/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF414_TOBAC (Q40467) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) Length = 413 Score = 274 bits (700), Expect = 1e-73 Identities = 137/151 (90%), Positives = 143/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 274 bits (700), Expect = 1e-73 Identities = 137/151 (90%), Positives = 143/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG+APEGSQFDA+ YD+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGLAPEGSQFDARQYDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF4A2_NICPL (P41379) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 413 Score = 271 bits (693), Expect = 1e-72 Identities = 136/151 (90%), Positives = 142/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG APEGSQFDA+ +D+KM ELL E EEFFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGSQFDARQFDAKMTELLGT-EQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 267 bits (682), Expect = 2e-71 Identities = 134/151 (88%), Positives = 142/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG APEGSQFDA+ YDSKM ELL+ E ++FFTSYDEV+ SFD MGL+ENLLRGIYAYG Sbjct: 1 MAGAAPEGSQFDARQYDSKMTELLN-AEGQDFFTSYDEVYHSFDAMGLKENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY L++CQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELLDCQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 267 bits (682), Expect = 2e-71 Identities = 132/151 (87%), Positives = 144/151 (95%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MA +AP+G+QFDA+ YDSKM +LL+ + ++FFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MARLAPDGAQFDARQYDSKMNDLLA-ADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 150
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 264 bits (674), Expect = 2e-70 Identities = 130/151 (86%), Positives = 143/151 (94%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG APEG+QFDA+ +D K+ E+L +G+ +EFFTSYD+VHESFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL-EGQ-DEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L++CQALVLAPTRE Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 149
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 261 bits (667), Expect = 1e-69 Identities = 132/151 (87%), Positives = 141/151 (93%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG APEGSQFDA+ +D+KM ELLS + ++FFTSYDEV++SFD MGLQENLLRGIYAYG Sbjct: 1 MAGAAPEGSQFDARQFDTKMNELLS-ADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYG 59 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL Y L+ECQALVLAPTRE Sbjct: 60 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLECQALVLAPTRE 119 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDYLGVKV ACVGGTSVRE Sbjct: 120 LAQQIEKVMRALGDYLGVKVTACVGGTSVRE 150
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 260 bits (664), Expect = 2e-69 Identities = 128/151 (84%), Positives = 138/151 (91%) Frame = +1 Query: 118 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 MAG APEG+QFD + +D ++ E+L +EFFTSYDEVHESFD MGLQENLLRGIYAYG Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVLDG--QDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 58 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L++CQALVLAPTRE Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 118 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQIEKVMRALGDY GVKVHACVGGTSVRE Sbjct: 119 LAQQIEKVMRALGDYQGVKVHACVGGTSVRE 149
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 167 bits (424), Expect = 1e-41 Identities = 86/139 (61%), Positives = 107/139 (76%) Frame = +1 Query: 151 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 330 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 331 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 510 I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 511 LGDYLGVKVHACVGGTSVR 567 LGDY+G HAC+GGT+VR Sbjct: 123 LGDYMGASCHACIGGTNVR 141
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 167 bits (424), Expect = 1e-41 Identities = 86/139 (61%), Positives = 107/139 (76%) Frame = +1 Query: 151 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 330 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 331 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 510 I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 511 LGDYLGVKVHACVGGTSVR 567 LGDY+G HAC+GGT+VR Sbjct: 123 LGDYMGASCHACIGGTNVR 141
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 167 bits (424), Expect = 1e-41 Identities = 86/139 (61%), Positives = 107/139 (76%) Frame = +1 Query: 151 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 330 D+++ D+ + +G E ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 331 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 510 I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 511 LGDYLGVKVHACVGGTSVR 567 LGDY+G HAC+GGT+VR Sbjct: 123 LGDYMGASCHACIGGTNVR 141
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 167 bits (422), Expect = 3e-41 Identities = 82/117 (70%), Positives = 98/117 (83%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 27 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 86 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR Sbjct: 87 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVR 143
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 167 bits (422), Expect = 3e-41 Identities = 82/117 (70%), Positives = 98/117 (83%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 85 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR Sbjct: 86 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVR 142
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 167 bits (422), Expect = 3e-41 Identities = 82/117 (70%), Positives = 98/117 (83%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 85 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR Sbjct: 86 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVR 142
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 167 bits (422), Expect = 3e-41 Identities = 82/117 (70%), Positives = 98/117 (83%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++++E+ ++FDDM L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 85 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR Sbjct: 86 TFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVR 142
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 166 bits (421), Expect = 3e-41 Identities = 82/117 (70%), Positives = 97/117 (82%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++++E+ +SFDDM L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 17 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTA 76 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 TF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR Sbjct: 77 TFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVR 133
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 165 bits (417), Expect = 1e-40 Identities = 79/118 (66%), Positives = 98/118 (83%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 +++ EV+++FDDM L+E LLRGIY YGFEKPSAIQQR I+P +G DVI QAQSGTGKTA Sbjct: 23 STWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTA 82 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 TF ILQQ+D + ECQAL+LAPTRELA QI++V+ ALG+Y+ V HAC+GGT+VRE Sbjct: 83 TFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVRE 140
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 164 bits (415), Expect = 2e-40 Identities = 78/118 (66%), Positives = 98/118 (83%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++YDE +SFD+M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 45 SNYDETVDSFDEMNLKPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTA 104 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 TF +LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+ Sbjct: 105 TFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRD 162
>IF4A_ASPFU (Q4WX43) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 406 Score = 163 bits (412), Expect = 4e-40 Identities = 81/135 (60%), Positives = 105/135 (77%) Frame = +1 Query: 166 DSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC 345 + K E + +G+ E ++YDE+ +SFD M L+ LLRG+YAYGFE+PSAIQQR I+P Sbjct: 4 NDKGLEEIPEGQIE---SNYDEITDSFDAMDLKPELLRGVYAYGFERPSAIQQRAILPII 60 Query: 346 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL 525 KG DVI QAQSGTGKTATF LQ+LD + CQAL+LAPTRELAQQI+KV+ A+GD++ Sbjct: 61 KGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM 120 Query: 526 GVKVHACVGGTSVRE 570 ++ HAC+GGT+VRE Sbjct: 121 NIECHACIGGTNVRE 135
>IF4A_ASPOR (Q2UPY3) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 162 bits (411), Expect = 5e-40 Identities = 82/137 (59%), Positives = 102/137 (74%) Frame = +1 Query: 160 NYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVP 339 N S++ L T + T+YDE+ +SFD M L+ LLRG+YAYGFE+PSAIQQR I P Sbjct: 24 NVGSRLTRLFQS--TGQIETNYDEITDSFDAMELKPELLRGVYAYGFERPSAIQQRAIKP 81 Query: 340 FCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD 519 KG DVI QAQSGTGKTATF LQ+LD + CQAL+LAPTRELAQQI+KV+ A+GD Sbjct: 82 IIKGSDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGD 141 Query: 520 YLGVKVHACVGGTSVRE 570 ++ + HAC+GGT+VRE Sbjct: 142 FMNITCHACIGGTAVRE 158
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 162 bits (410), Expect = 6e-40 Identities = 84/139 (60%), Positives = 105/139 (75%) Frame = +1 Query: 151 DAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 330 D+++ D+ + +G E ++++E+ +S DDM L E+LLRGIYAYGFEKPSAIQQR Sbjct: 6 DSRSRDNGPDGMEPEGVIE---SNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRA 62 Query: 331 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 510 I+ KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ A Sbjct: 63 ILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query: 511 LGDYLGVKVHACVGGTSVR 567 LGDY+G HAC+GGT+VR Sbjct: 123 LGDYMGASCHACIGGTNVR 141
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 162 bits (409), Expect = 8e-40 Identities = 80/129 (62%), Positives = 100/129 (77%) Frame = +1 Query: 184 LLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVI 363 ++ Q E T+YDEV ++FDDM L+ LLRGIYAYGFE+PSAIQQR I+P DV+ Sbjct: 1 MVDQLEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVL 60 Query: 364 QQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 543 QAQSGTGKTATF +LQ++D L +CQAL+LAPTRELAQQI+KV+ ALGD + V+ HA Sbjct: 61 AQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHA 120 Query: 544 CVGGTSVRE 570 C+GGT VR+ Sbjct: 121 CIGGTLVRD 129
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 161 bits (407), Expect = 1e-39 Identities = 81/131 (61%), Positives = 98/131 (74%) Frame = +1 Query: 178 QELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 357 +E + T E ++YDE+ E F+ + L+ +LLRGI+AYGFEKPSAIQQRGI P G D Sbjct: 11 EENVQVASTGEIESNYDEIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYD 70 Query: 358 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKV 537 I QAQSGTGKTATF LQ++DY L CQ L+LAPTRELAQQI+KV ALGDY ++ Sbjct: 71 TIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRC 130 Query: 538 HACVGGTSVRE 570 HACVGGTSVR+ Sbjct: 131 HACVGGTSVRD 141
>IF4A_EMENI (Q5B948) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 160 bits (404), Expect = 3e-39 Identities = 75/118 (63%), Positives = 97/118 (82%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++YDE+ +SFD M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTA Sbjct: 41 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTA 100 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 TF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+ Sbjct: 101 TFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRD 158
>IF4A_USTMA (Q4P331) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 411 Score = 159 bits (402), Expect = 5e-39 Identities = 85/156 (54%), Positives = 111/156 (71%) Frame = +1 Query: 103 PDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRG 282 P+ ++ A AP G + N ++ GE E ++++ V ++FD+M L+E LLRG Sbjct: 4 PEDTSAAAAAPAGEAGNNLN--------IADGEIE---SNWETVIDNFDNMELKEELLRG 52 Query: 283 IYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVL 462 +YAYGFE+PSAIQ R IVP KG DVI QAQSGTGKTATF ILQ++D + QAL+L Sbjct: 53 VYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALIL 112 Query: 463 APTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 APTRELAQQI+KV+ ALGDY+ + HAC+GGT+VRE Sbjct: 113 APTRELAQQIQKVVIALGDYMKIDCHACIGGTNVRE 148
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 157 bits (398), Expect = 2e-38 Identities = 80/117 (68%), Positives = 94/117 (80%) Frame = +1 Query: 220 SYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 399 +YD+V ESFDDM L+E LLRGIY +GFEKPSAIQ+R IVP G DVI QAQSGTGKTAT Sbjct: 23 NYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTAT 82 Query: 400 FCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 F ILQ++D+ QALV+APTRELAQQI+KVM ALG+YL V + C+GGTSVR+ Sbjct: 83 FSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
>IF4A_CRYNE (Q5KN60) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 401 Score = 157 bits (396), Expect = 3e-38 Identities = 80/118 (67%), Positives = 96/118 (81%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 ++++EV ++FDDM L+ LLRGIYAYGFE+PSAIQQR I+P G D I QAQSGTGKTA Sbjct: 21 SNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTA 80 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 TF ILQ++D + + QALVLAPTRELAQQI+KV+ ALGDYL V HACVGGT+VRE Sbjct: 81 TFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVRE 138
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 156 bits (394), Expect = 4e-38 Identities = 76/132 (57%), Positives = 100/132 (75%) Frame = +1 Query: 175 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 354 M + L+ ++ + T+YDEV SFDD+GL++ LLRGIY YGFE PS+IQQR I+P KG Sbjct: 1 MADGLTDIDSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGN 60 Query: 355 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 534 DV+ QAQSGTGKTATF LQ +D + + QAL++APTRELA QI+KV+ A G+Y+ ++ Sbjct: 61 DVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIE 120 Query: 535 VHACVGGTSVRE 570 HAC+GGTSV E Sbjct: 121 CHACIGGTSVAE 132
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 152 bits (385), Expect = 5e-37 Identities = 81/130 (62%), Positives = 99/130 (76%), Gaps = 2/130 (1%) Frame = +1 Query: 187 LSQGETEEFFTSYDEVH--ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 360 ++ G+++ F S + V +FD MGL+E+LLRGIYAY FEKPSAIQQR I+P +G DV Sbjct: 5 INAGDSKLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDV 64 Query: 361 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 540 I QAQSGTGKTATF +LQ +D L E QALVL+PTRELA QI+ V+ ALGDYL V+ H Sbjct: 65 IAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCH 124 Query: 541 ACVGGTSVRE 570 AC+GGTSV E Sbjct: 125 ACIGGTSVGE 134
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 152 bits (385), Expect = 5e-37 Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 1/125 (0%) Frame = +1 Query: 199 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 375 E EF TS + VH +F+ M L+ENLLRGIYAYG+E PSA+Q R IV CKG D I QAQ Sbjct: 13 ERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQ 72 Query: 376 SGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 SGTGKTATF +LQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GG Sbjct: 73 SGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGG 132 Query: 556 TSVRE 570 T+V E Sbjct: 133 TNVGE 137
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 150 bits (380), Expect = 2e-36 Identities = 80/122 (65%), Positives = 95/122 (77%), Gaps = 1/122 (0%) Frame = +1 Query: 208 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 384 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86 Query: 385 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V Sbjct: 87 GKTATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146 Query: 565 RE 570 E Sbjct: 147 GE 148
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 150 bits (380), Expect = 2e-36 Identities = 80/122 (65%), Positives = 95/122 (77%), Gaps = 1/122 (0%) Frame = +1 Query: 208 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 384 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86 Query: 385 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146 Query: 565 RE 570 E Sbjct: 147 GE 148
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 150 bits (378), Expect = 3e-36 Identities = 77/122 (63%), Positives = 94/122 (77%), Gaps = 1/122 (0%) Frame = +1 Query: 208 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 384 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQSGT Sbjct: 13 EFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGT 72 Query: 385 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 GKTATF GILQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ Sbjct: 73 GKTATFSIGILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNI 132 Query: 565 RE 570 E Sbjct: 133 GE 134
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 149 bits (377), Expect = 4e-36 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%) Frame = +1 Query: 199 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 375 E +F TS + VH +F+ M L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQ Sbjct: 12 EKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQ 71 Query: 376 SGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 SGTGKTATF +LQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GG Sbjct: 72 SGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGG 131 Query: 556 TSVRE 570 T+V E Sbjct: 132 TNVGE 136
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 149 bits (375), Expect = 7e-36 Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 1/123 (0%) Frame = +1 Query: 199 ETEEFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 375 E E TS D SF++M L+E+LLRGIYAYG+E PSA+Q R I+ CKG DVI QAQ Sbjct: 7 ENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQ 66 Query: 376 SGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 SGTGKTATF GILQ +D + + QAL+L+PTRELA QI+ V+ ALGD++ V+ HAC+GG Sbjct: 67 SGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGG 126 Query: 556 TSV 564 TSV Sbjct: 127 TSV 129
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 147 bits (371), Expect = 2e-35 Identities = 78/122 (63%), Positives = 93/122 (76%), Gaps = 1/122 (0%) Frame = +1 Query: 208 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 384 EF TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86 Query: 385 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 GKTATF +LQ LD + E QAL+LAP RELA QI+K + LGDY+ V+ HAC+GGT+V Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNV 146 Query: 565 RE 570 E Sbjct: 147 GE 148
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 147 bits (371), Expect = 2e-35 Identities = 76/122 (62%), Positives = 93/122 (76%), Gaps = 1/122 (0%) Frame = +1 Query: 208 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 384 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQSGT Sbjct: 13 EFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGT 72 Query: 385 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 GKTATF ILQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ Sbjct: 73 GKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNI 132 Query: 565 RE 570 E Sbjct: 133 GE 134
>IF4A_CANGA (Q6FQQ6) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 146 bits (369), Expect = 4e-35 Identities = 73/128 (57%), Positives = 94/128 (73%) Frame = +1 Query: 187 LSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQ 366 ++Q + + T+YD+V FDDM L E LLRG++ YGF KPSAIQQR I+P +G DV+ Sbjct: 6 MTQLDESQIETNYDKVVYEFDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLA 65 Query: 367 QAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC 546 QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ ALG ++ +KVHAC Sbjct: 66 QAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHAC 125 Query: 547 VGGTSVRE 570 +GGTS E Sbjct: 126 IGGTSFVE 133
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 146 bits (369), Expect = 4e-35 Identities = 74/113 (65%), Positives = 88/113 (77%) Frame = +1 Query: 232 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 411 V +F+ + L+E+LLRGIYAY FEKPSAIQQR I+P +G DVI QAQSGTGKTATF Sbjct: 21 VAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSIS 80 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +LQ +D L E QALVL+PTRELA QI+ V+ ALGDY+ V HAC+GGTSV E Sbjct: 81 MLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVSCHACIGGTSVGE 133
>IF4A_YEAST (P10081) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1/2) (Stimulator factor I 37 kDa component) (p37) Length = 394 Score = 145 bits (367), Expect = 6e-35 Identities = 73/124 (58%), Positives = 92/124 (74%) Frame = +1 Query: 199 ETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQS 378 E + T+YD+V FDDM L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQS Sbjct: 8 EESQIQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQS 67 Query: 379 GTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 558 GTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGT Sbjct: 68 GTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGT 127 Query: 559 SVRE 570 S E Sbjct: 128 SFVE 131
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 145 bits (366), Expect = 8e-35 Identities = 75/122 (61%), Positives = 92/122 (75%), Gaps = 1/122 (0%) Frame = +1 Query: 208 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 384 EF TS + V +F+DM L+E+LLRGIYAYG+E PSA+Q R IV CKG D I QAQSGT Sbjct: 14 EFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGT 73 Query: 385 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 GKTATF LQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT++ Sbjct: 74 GKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNI 133 Query: 565 RE 570 E Sbjct: 134 GE 135
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 145 bits (365), Expect = 1e-34 Identities = 73/132 (55%), Positives = 94/132 (71%) Frame = +1 Query: 175 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 354 M + ++ E E T+YD++ FD++ L+E LLRGIY YGF PSAIQQR I+P +G Sbjct: 1 MSDSITNPENSEIQTNYDKIVHKFDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGH 60 Query: 355 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 534 DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ VK Sbjct: 61 DVLAQAQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQIQKVVMALALHMDVK 120 Query: 535 VHACVGGTSVRE 570 VHAC+GGT RE Sbjct: 121 VHACIGGTDPRE 132
>IF4A_KLULA (Q6CXT4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 141 bits (356), Expect = 1e-33 Identities = 71/132 (53%), Positives = 96/132 (72%) Frame = +1 Query: 175 MQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 354 M + ++ + + ++YD+V SFDD+ L+E LLRGI+ YGF +PSAIQQR I+P +G Sbjct: 1 MSDGITDIDENQIQSTYDKVVYSFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGK 60 Query: 355 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 534 DV+ QAQSGTGKT TF LQ +D + Q L+LAPTRELA QI+KV+ AL ++ VK Sbjct: 61 DVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVK 120 Query: 535 VHACVGGTSVRE 570 VHAC+GGTS++E Sbjct: 121 VHACIGGTSLQE 132
>FAL1_DEBHA (Q6BT27) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 140 bits (352), Expect = 3e-33 Identities = 67/114 (58%), Positives = 85/114 (74%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 +VH +F+ M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF Sbjct: 23 KVHATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSI 82 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 G+L+ +D +CQAL+L+PTRELAQQI+ V++ LGDY+ V HAC+GGT V E Sbjct: 83 GMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHACIGGTHVGE 136
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 138 bits (347), Expect = 1e-32 Identities = 66/114 (57%), Positives = 85/114 (74%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 +VH +F+ M L+ +LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF Sbjct: 23 KVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSI 82 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 G+L+ +D ECQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GG +V E Sbjct: 83 GMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGE 136
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 137 bits (345), Expect = 2e-32 Identities = 67/118 (56%), Positives = 88/118 (74%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 T+YD V +FDD+ L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTA Sbjct: 16 TNYDNVVYTFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 TF LQ++D QAL+LAPTRELA QI+ V+ +G YL V VHA +GGTS+++ Sbjct: 76 TFTISALQRIDENEKSTQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKD 133
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 137 bits (345), Expect = 2e-32 Identities = 72/120 (60%), Positives = 89/120 (74%), Gaps = 1/120 (0%) Frame = +1 Query: 208 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 384 EF TS D +V +F+ M L+++LLRGIYAYGFE PSAIQ R I KG D I QAQSGT Sbjct: 13 EFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGT 72 Query: 385 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 GKTATF +L+ +D E QA+VL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGTS+ Sbjct: 73 GKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSL 132
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 134 bits (338), Expect = 1e-31 Identities = 65/110 (59%), Positives = 83/110 (75%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF +MG++++LLRG+Y YGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q Sbjct: 19 SFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQ 78 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +D E QAL+L+PTRELA Q EKV+ A+GDY+ V+ HAC+GG SV E Sbjct: 79 IVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGE 128
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 134 bits (337), Expect = 2e-31 Identities = 67/118 (56%), Positives = 87/118 (73%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 T+YD V FDD+ L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTA Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 TF LQ+++ QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ + Sbjct: 76 TFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSD 133
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 132 bits (333), Expect = 5e-31 Identities = 68/113 (60%), Positives = 82/113 (72%) Frame = +1 Query: 232 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 411 V +F+ M LQENLLRGIY YGFE PSAIQ R I +G DVI QAQSGTGKTATF G Sbjct: 21 VSPTFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIG 80 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +LQ +D + QALVL+PTRELA QI +V+R LGDY+ V AC GG ++++ Sbjct: 81 MLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQ 133
>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 128 bits (321), Expect = 1e-29 Identities = 65/114 (57%), Positives = 82/114 (71%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 ++ +F+ M L+E LLRGIY+YGFE PSAIQ R I G DVI QAQSGTGKTATF Sbjct: 20 KISATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTI 79 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 G+LQ +D + QALVL+PTRELA QI KV+ LGDY+ VK +A GG ++++ Sbjct: 80 GMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKD 133
>FAL1_KLULA (Q6CX73) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 128 bits (321), Expect = 1e-29 Identities = 66/114 (57%), Positives = 80/114 (70%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 +V +F+ M L+ +LLRGIY YGFE PS+IQ R I G DVI QAQSGTGKTATF Sbjct: 20 KVSATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTI 79 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 G+LQ +D E QALVL+PTRELA Q E V+ LGDYL V HAC GG ++++ Sbjct: 80 GLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQ 133
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 125 bits (313), Expect = 1e-28 Identities = 65/113 (57%), Positives = 81/113 (71%), Gaps = 3/113 (2%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SFDDM L +NLLRGIY+YGFEKPS+IQQR I PF +G D+I QAQSGTGKT F G+LQ Sbjct: 27 SFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGLLQ 86 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHAC---VGGTSVRE 570 +LD+ Q LVL+PTRELA Q +V+ +G++L C VGGT V++ Sbjct: 87 RLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQD 139
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 124 bits (312), Expect = 1e-28 Identities = 61/114 (53%), Positives = 82/114 (71%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 +V +F+ M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTI 79 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 G+LQ +D + QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++ Sbjct: 80 GLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKD 133
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 98.2 bits (243), Expect = 1e-20 Identities = 51/111 (45%), Positives = 72/111 (64%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 +SF+D L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F L Sbjct: 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCL 89 Query: 418 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 Q + L + QAL+L PTRELA Q +V+R LG ++G + GGTS+R+ Sbjct: 90 QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRD 140
>DHH1_YARLI (Q6C0X2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 522 Score = 96.7 bits (239), Expect = 4e-20 Identities = 49/109 (44%), Positives = 71/109 (65%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D L+ LL GI+ GFE PS IQ+ I G D++ +A++GTGKTA F LQQ Sbjct: 30 FEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPALQQ 89 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ + + QAL++ PTRELA Q +V + LG +LG+KV GGT++R+ Sbjct: 90 VNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLGIKVMVTTGGTNLRD 138
>DHH1_KLULA (Q6CSZ7) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 514 Score = 95.1 bits (235), Expect = 1e-19 Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 4/148 (2%) Frame = +1 Query: 139 GSQFDAKNYDSKMQELLSQGETEEFFTSYDEV----HESFDDMGLQENLLRGIYAYGFEK 306 GS N D K Q + + +T D+V SF+D L+ LL GI+ GFEK Sbjct: 2 GSDTSESNNDWKTQLNIPKKDTRP---QTDDVLNTKGRSFEDFYLKRELLMGIFEAGFEK 58 Query: 307 PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQ 486 PS IQ+ I G D++ +A++GTGKTA F L+++ L + QAL++ PTRELA Sbjct: 59 PSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELAL 118 Query: 487 QIEKVMRALGDYLGVKVHACVGGTSVRE 570 Q +V+R LG + G+ GGT++R+ Sbjct: 119 QTSQVVRTLGKHCGISCMVTTGGTNLRD 146
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 94.7 bits (234), Expect = 2e-19 Identities = 49/110 (44%), Positives = 70/110 (63%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF+D L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+ Sbjct: 32 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 91 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ L + QAL++ PTRELA Q +V+R LG + GV GGT++R+ Sbjct: 92 KIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVSCMVTTGGTNLRD 141
>DHH1_GIBZE (Q4HW67) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 486 Score = 94.7 bits (234), Expect = 2e-19 Identities = 46/109 (42%), Positives = 70/109 (64%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F++ L+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLER 103 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT +R+ Sbjct: 104 INPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRD 152
>DHH1_CRYNV (Q58Z64) ATP-dependent RNA helicase VAD1 (EC 3.6.1.-) (Virulence| associated DEAD box protein 1) Length = 616 Score = 93.2 bits (230), Expect = 5e-19 Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D GL+ LL GIY GFE+PS IQ++ I G D++ +A++GTGKTA+F L + Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 ++ L QAL+L PTRELA Q +V + LG ++ ++V GGT++R+ Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRD 147
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 93.2 bits (230), Expect = 5e-19 Identities = 47/110 (42%), Positives = 70/110 (63%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F+D L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+ Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ L + QAL++ PTRELA Q +V+R LG + G+ GGT++R+ Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRD 156
>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 625 Score = 93.2 bits (230), Expect = 5e-19 Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D GL+ LL GIY GFE+PS IQ++ I G D++ +A++GTGKTA+F L + Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 ++ L QAL+L PTRELA Q +V + LG ++ ++V GGT++R+ Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRD 147
>DHH1_SCHPO (Q09181) Putative ATP-dependent RNA helicase ste13 (EC 3.6.1.-)| Length = 485 Score = 92.4 bits (228), Expect = 8e-19 Identities = 47/109 (43%), Positives = 69/109 (63%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D L+ LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +D + Q L+L PTRELA Q +V + LG ++ VKV GGT++R+ Sbjct: 106 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRD 154
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 91.7 bits (226), Expect = 1e-18 Identities = 56/147 (38%), Positives = 80/147 (54%) Frame = +1 Query: 130 APEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKP 309 A E S D + S ++ S + EE +E+ ESF ++ L L+ + KP Sbjct: 35 ANEPSPSDEDSAQSNSKDSNSNEQPEES----EEIFESFTELDLVPELIEACKNLNYNKP 90 Query: 310 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQ 489 + IQ + I P KG D+I AQ+G+GKTA F IL QL + A +LAPTRELAQQ Sbjct: 91 TPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQLWHDQQPYYACILAPTRELAQQ 150 Query: 490 IEKVMRALGDYLGVKVHACVGGTSVRE 570 I++ +LG +GV+ VGG S+ + Sbjct: 151 IKETFDSLGSLMGVRSTCIVGGMSMMD 177
>DHH1_ASPFU (Q4WWD3) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 507 Score = 90.5 bits (223), Expect = 3e-18 Identities = 45/109 (41%), Positives = 68/109 (62%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ + QAL+L PTRELA Q +V + LG +LG+ V GGT + + Sbjct: 109 INPKSTKTQALILVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLMD 157
>DHH1_ASPOR (Q2U5A2) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 511 Score = 89.7 bits (221), Expect = 5e-18 Identities = 45/109 (41%), Positives = 67/109 (61%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++ Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ + QAL+L PTRELA Q V + LG +LG+ V GGT + + Sbjct: 109 INPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMD 157
>DBP5_USTMA (Q4P7Z8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 456 Score = 89.4 bits (220), Expect = 7e-18 Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 2/106 (1%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+ +GL ENLL+GIYA ++KPS IQ++ + + ++I Q+QSGTGKTA F Sbjct: 64 KSFEALGLHENLLKGIYAMKYQKPSKIQEKALPLLLQNPPKNMIGQSQSGTGKTAAFILT 123 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 549 +L ++DY L + QA+ LAP+RELA+QI V R + + V C+ Sbjct: 124 MLSRIDYDLQKPQAIALAPSRELARQIMDVARTMSKFTNVTTCLCL 169
>DHH1_NEUCR (Q7S5D9) ATP-dependent RNA helicase dhh-1 (EC 3.6.1.-)| Length = 569 Score = 89.0 bits (219), Expect = 9e-18 Identities = 45/109 (41%), Positives = 67/109 (61%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 ++D +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L + Sbjct: 47 WEDFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNK 106 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT +R+ Sbjct: 107 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRD 155
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 88.2 bits (217), Expect = 1e-17 Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 2/151 (1%) Frame = +1 Query: 124 GMAPEGSQFDAKNYDSKMQELLSQG--ETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 297 G + S+ DA K+ + S+ T+ T+ DE ESF ++ L L++ Sbjct: 41 GGSESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLN 100 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 + KP+ IQ + I P +G D+I AQ+G+GKTA F IL +L + A +LAPTRE Sbjct: 101 YSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRE 160 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LAQQI++ +LG +GV+ VGG ++ + Sbjct: 161 LAQQIKETFDSLGSLMGVRSTCIVGGMNMMD 191
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 85.9 bits (211), Expect = 7e-17 Identities = 44/110 (40%), Positives = 68/110 (61%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F+D L+ LL GI+ GFE+PS IQ+ I D++ +A++GTGKTA F L+ Sbjct: 30 TFEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLE 89 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + + QAL++ PTRELA Q +V+R LG + G+ GGT++R+ Sbjct: 90 IVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRD 139
>ME31_DROME (P23128) Putative ATP-dependent RNA helicase me31b (EC 3.6.1.-)| (Maternal expression at 31B) Length = 459 Score = 85.1 bits (209), Expect = 1e-16 Identities = 43/109 (39%), Positives = 67/109 (61%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F++ L+ LL GI+ G+E+PS IQ+ I G DV+ +A++GTGKT +C +L+Q Sbjct: 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 119 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +D QALV+ PTRELA Q ++ L +L ++V GGT +++ Sbjct: 120 IDPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKD 168
>DDX6_XENLA (P54824) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Xp54) Length = 481 Score = 83.6 bits (205), Expect = 4e-16 Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT + +L++ Sbjct: 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKTGAYLIPLLER 156 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 LD QA+V+ PTRELA Q+ ++ + ++ G KV A GGT++R+ Sbjct: 157 LDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRD 206
>DDX6_MOUSE (P54823) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) Length = 483 Score = 83.6 bits (205), Expect = 4e-16 Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++ Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 LD QA+V+ PTRELA Q+ ++ + ++ G KV A GGT++R+ Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRD 207
>DDX6_HUMAN (P26196) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK) Length = 483 Score = 83.6 bits (205), Expect = 4e-16 Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+D L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++ Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 LD QA+V+ PTRELA Q+ ++ + ++ G KV A GGT++R+ Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRD 207
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 82.8 bits (203), Expect = 6e-16 Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Frame = +1 Query: 193 QGETEEFFTSYDEV-HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQ 369 Q + E+ +EV ESF + L L++ F KP+ IQ R I P G DVI Sbjct: 57 QAKDEKVEEPEEEVTFESFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGL 116 Query: 370 AQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 549 AQ+G+GKTA F IL +L A VLAPTRELAQQI++ +LG +GV+ V Sbjct: 117 AQTGSGKTAAFAIPILNKLWEDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIV 176 Query: 550 GGTSVRE 570 GG ++ + Sbjct: 177 GGMNMMD 183
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 82.4 bits (202), Expect = 8e-16 Identities = 48/107 (44%), Positives = 64/107 (59%) Frame = +1 Query: 235 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 414 +++F D+G+ L R + GF+KPS IQ I +G D+I AQ+G+GKTA F I Sbjct: 37 NKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPI 96 Query: 415 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 LQ L ALVLAPTRELA QI + + +LG +GV+ VGG Sbjct: 97 LQTLWENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGG 143
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 81.6 bits (200), Expect = 1e-15 Identities = 45/115 (39%), Positives = 66/115 (57%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 +E SF ++ L L+ F KP+ IQ + I P +G D+I AQ+G+GKTA F Sbjct: 62 EEGFSSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFA 121 Query: 406 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 IL +L + A +LAPTRELAQQI++ +LG +GV+ VGG ++ + Sbjct: 122 IPILNRLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMD 176
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 1e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 1e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 1e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 81.6 bits (200), Expect = 1e-15 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 61 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 +LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 111
>DBP5_EMENI (Q5AVM1) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 477 Score = 80.9 bits (198), Expect = 2e-15 Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 7/103 (6%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCS 408 ++F+D+GL +L+G+ A F KPS IQ+R + P G +++ Q+QSGTGKTA F Sbjct: 69 KNFEDLGLDPRILQGLSAMNFRKPSKIQERAL-PLLMGNPPKNLVGQSQSGTGKTAAFVL 127 Query: 409 GILQQLDYGLVEC----QALVLAPTRELAQQIEKVMRALGDYL 525 IL +LD + QAL+LAPTRELA+QI V++ +G +L Sbjct: 128 NILSRLDLSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFL 170
>DDX39_HUMAN (O00148) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase URH49) Length = 427 Score = 80.5 bits (197), Expect = 3e-15 Identities = 57/155 (36%), Positives = 78/155 (50%), Gaps = 7/155 (4%) Frame = +1 Query: 127 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 288 MA + + D +YD + + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 289 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 468 GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++ + LV+ Sbjct: 61 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH 120 Query: 469 TRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 TRELA QI K Y+ VKV GG S+++ Sbjct: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKK 155
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 80.5 bits (197), Expect = 3e-15 Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 2/109 (1%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF ++ L E+L++GI A GF+KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 148 QSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLN 207 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 558 +L ++D + QA+ +AP+RELA+QI++V+ +G + V + G+ Sbjct: 208 MLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGS 256
>DDX20_HUMAN (Q9UHI6) Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-)| (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) Length = 824 Score = 80.5 bits (197), Expect = 3e-15 Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+ + L +L G+ A GFE+PS +Q + I GLD+I QA+SGTGKT F + L Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 L + Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + + Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 173
>DBP5_ASPOR (Q2U8K6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 487 Score = 80.1 bits (196), Expect = 4e-15 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 7/111 (6%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+D+GL +L+G+ A F KPS IQ+R + +++ Q+QSGTGKTA F Sbjct: 78 KSFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLN 137 Query: 412 ILQQLDYGLVEC----QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 549 L +LD + QAL+LAPTRELA+QI V++ +G +L G+ V V Sbjct: 138 ALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAV 188
>DBP5_CANGA (Q6FKN8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 504 Score = 80.1 bits (196), Expect = 4e-15 Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 2/106 (1%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SFD++GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F Sbjct: 114 KSFDELGLSPELLKGIYAMKFQKPSKIQERALPLLLSNPPRNMIAQSQSGTGKTAAFSLT 173 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 549 +L ++D QA+ LAP+RELA+Q +V++ +G Y + V Sbjct: 174 MLSRVDETQNVPQAICLAPSRELARQTLEVIQEMGKYTKITTQLIV 219
>DBP5_GIBZE (Q4HY71) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 80.1 bits (196), Expect = 4e-15 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 11/175 (6%) Frame = +1 Query: 76 PSGDPRHLLPDASAMAGMAPE------GSQFDAKNYDSKMQ-ELLSQGETEEFFTSYDEV 234 P+ P P AS G A GS +D ++ L E F ++ Sbjct: 19 PAETPAETAPAASGELGQADGNIEDLGGSGLQEPEWDVEVSLSELQNNEATPFHSA---- 74 Query: 235 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCS 408 ++ D+GL+E+LL+G+ + F KPS +Q + + +++ Q+QSGTGKTA F + Sbjct: 75 -TTWQDLGLREDLLKGLLSLNFLKPSKVQGKSLPLMLSDPPRNMLAQSQSGTGKTAAFVT 133 Query: 409 GILQQLDYGLVEC-QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVR 567 IL ++D+ + QAL LAP+RELA+QIE V+ A+G ++ KV A + G R Sbjct: 134 AILSRVDFSKPDQPQALALAPSRELARQIEGVINAIGRFVENKKVAAAIPGVLPR 188
>SUB2_YARLI (Q6CH89) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 441 Score = 79.7 bits (195), Expect = 5e-15 Identities = 65/184 (35%), Positives = 83/184 (45%), Gaps = 2/184 (1%) Frame = +1 Query: 25 SHAAESEXLISDSPQRDPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGET 204 SH E E L D S LP + +G N D+K + + E Sbjct: 2 SHEGEEELL-------DYSDSEEIALPSTTVESG----------SNGDAKAETTTVKEEN 44 Query: 205 EEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 381 E SY +H + F D L+ LLR I GFE PS +QQ I G DV+ QA++G Sbjct: 45 TEQKGSYVGIHSTGFRDFLLKPELLRAIVDCGFEHPSEVQQVCIPQSILGTDVLCQAKAG 104 Query: 382 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 558 GKTA F LQQL+ EC +VL TRELA QI YL VK GG+ Sbjct: 105 VGKTAVFVLSTLQQLEPVPGECSVVVLCHTRELAYQIMNEYARFSKYLPDVKTAVFYGGS 164 Query: 559 SVRE 570 +++ Sbjct: 165 PIQK 168
>DBP5_SCHPO (Q09747) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 503 Score = 79.7 bits (195), Expect = 5e-15 Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 2/101 (1%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+++ L+ LL+GIY+ F+KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 114 KSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALT 173 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 534 +L ++D + + QA+ LAP+RELA+QI V+ +G Y VK Sbjct: 174 MLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVK 214
>DDX20_MOUSE (Q9JJY4) Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.-)| (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) (Regulator of steroidogenic factor 1) (ROSF-1) Length = 825 Score = 79.7 bits (195), Expect = 5e-15 Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+ + L +L G+ A GFE+PS +Q + I GLD+I QA+SGTGKT F + L Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 L Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + + Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 174
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 79.3 bits (194), Expect = 7e-15 Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 6/114 (5%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SFD +GL ++LR + G+ +P+ IQQ+ I +G D++ AQ+GTGKTA F +LQ Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 Query: 421 QL------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 L G +AL+L PTRELA QI + +R YL ++ GG S+ Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 79.3 bits (194), Expect = 7e-15 Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 4/159 (2%) Frame = +1 Query: 106 DASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHE----SFDDMGLQENL 273 DA A+A E + +A ++ + + E F T D E SF+++ L L Sbjct: 21 DARALA----EKIKKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFKSFNELKLIPEL 76 Query: 274 LRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQA 453 L I F KP+ IQ I +G D+I AQ+G+GKTA F ILQ L Sbjct: 77 LEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALWEAQAAYYG 136 Query: 454 LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LVLAPTRELA QI++ ALG +G++ VGG + + Sbjct: 137 LVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMD 175
>DBP5_NEUCR (Q8X0X2) ATP-dependent RNA helicase dbp-5 (EC 3.6.1.-)| Length = 483 Score = 79.3 bits (194), Expect = 7e-15 Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 5/189 (2%) Frame = +1 Query: 19 LRSHAAESEXLISDSPQRDPSGDPRHLLPDASAMAGMAPEGSQFDAKN-YDSKMQELLSQ 195 L S + + + +P+ P P P A E KN Y+ +++ Q Sbjct: 4 LASRITKPDEAPAAAPEAAPVSAPASEEPKAPENETSIEESQSNLVKNEYEVEIKLSDLQ 63 Query: 196 GETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQ 369 +TE S SFD++GL E + RG+ A F+KPS +Q++ + ++I Q Sbjct: 64 NDTESPLYSVS----SFDELGLPEAVNRGLLAINFKKPSKVQEKCLPLMLSDPPRNMIAQ 119 Query: 370 AQSGTGKTATFCSGILQQLDYGLV-ECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHA 543 +QSGTGKTA F +L ++D + QAL+LAP+RELA+QI+ V++ +G + + V A Sbjct: 120 SQSGTGKTAAFVLTVLSRIDLSKPHQPQALLLAPSRELARQIQTVVQTIGQFCENLIVEA 179 Query: 544 CVGGTSVRE 570 + G RE Sbjct: 180 AIPGAISRE 188
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 78.6 bits (192), Expect = 1e-14 Identities = 47/110 (42%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 E +F D+GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F Sbjct: 2 EFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSL 61 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 +L +D L Q LVLAPTRELA Q+ + M ++ GV V A GG Sbjct: 62 PLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGG 111
>UAP56_RAT (Q63413) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UAP56_PONPY (Q5RE47) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UAP56_PIG (Q29024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UAP56_PANTR (P60024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UAP56_MOUSE (Q9Z1N5) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (HLA-B-associated transcript 1) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UAP56_MACMU (Q5TM17) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UAP56_HUMAN (Q13838) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (HLA-B-associated transcript-1) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UAP56_CANFA (Q5WR10) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 78.6 bits (192), Expect = 1e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 78.6 bits (192), Expect = 1e-14 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 14/161 (8%) Frame = +1 Query: 130 APEGSQFDAKNYDSKMQELLSQGETEEFFTSY----------DEVHESFDDMGLQENLLR 279 A E + D + + +E + EE Y + VH +F+ + L +L+ Sbjct: 173 AEEAVELDGVEFGDEQEEAREEDTAEEMAQFYAPSNEGEEAKNVVHSTFNSLSLSRPVLK 232 Query: 280 GIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQ 450 G+ A G+ KPS IQ I G DVI A +G+GKTA F I+++L Y + + Sbjct: 233 GLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTR 292 Query: 451 ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 LVL PTRELA Q+ V + LG ++ G+ VGG ++R+ Sbjct: 293 VLVLTPTRELAIQVADVGKKLGKFVSGLTFGLAVGGLNLRQ 333
>DDX39_RAT (Q5U216) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase, DECD variant of DEAD box family) Length = 427 Score = 78.6 bits (192), Expect = 1e-14 Identities = 56/155 (36%), Positives = 78/155 (50%), Gaps = 7/155 (4%) Frame = +1 Query: 127 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 288 MA + + + +YD + + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENELLDYDEDEEPQVPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 289 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 468 GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++ + LV+ Sbjct: 61 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCH 120 Query: 469 TRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 TRELA QI K Y+ VKV GG S+++ Sbjct: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKK 155
>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 469 Score = 78.2 bits (191), Expect = 2e-14 Identities = 40/97 (41%), Positives = 66/97 (68%), Gaps = 2/97 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSG 411 +SF+++GL E LL+G+YA F+KPS IQ++ + + ++I Q+QSGTGKTA F Sbjct: 79 KSFEELGLSEELLKGLYAMKFQKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSLT 138 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L ++D + QA+ L+P RELA+Q +V++ +G + Sbjct: 139 MLTRVDPNVNSTQAICLSPARELARQTLEVIQEMGKF 175
>DDX39_MOUSE (Q8VDW0) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) Length = 427 Score = 78.2 bits (191), Expect = 2e-14 Identities = 56/155 (36%), Positives = 77/155 (49%), Gaps = 7/155 (4%) Frame = +1 Query: 127 MAPEGSQFDAKNYDSKMQELLSQGET-----EEFFTSYDEVHES-FDDMGLQENLLRGIY 288 MA + + + +YD + Q T ++ SY +H S F D L+ LLR I Sbjct: 1 MAEQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV 60 Query: 289 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 468 GFE PS +Q I G+DV+ QA+SG GKTA F LQQ++ + LV+ Sbjct: 61 DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCH 120 Query: 469 TRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 TRELA QI K Y+ VKV GG S+++ Sbjct: 121 TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKK 155
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 77.8 bits (190), Expect = 2e-14 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%) Frame = +1 Query: 160 NYDSKMQELLSQGET-EEFFTSYDEVH--ESFDDMGLQENLLRGIYAYGFEKPSAIQQRG 330 N DS+ + + S+G +E TS +E +SF ++G+ + L G++ P+ IQ + Sbjct: 17 NSDSEAESVSSRGSAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQA 76 Query: 331 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 510 I +G DVI A++G+GKTA F +LQ L LVLAPTRELA QI + Sbjct: 77 IPLALEGRDVIGLAETGSGKTAAFALPMLQALMEAPQTLFGLVLAPTRELAYQISQAFET 136 Query: 511 LGDYLGVKVHACVGG 555 LG +GV+ VGG Sbjct: 137 LGSTIGVRCAVIVGG 151
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 77.8 bits (190), Expect = 2e-14 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%) Frame = +1 Query: 169 SKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK 348 +K ++G+ E+ + H SF M L +L+G+ GFE P+ IQ + I Sbjct: 238 AKKNAFFAEGDKEKSMMT--TTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALL 295 Query: 349 GLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTRELAQQIEKVMRALGD 519 G D++ A +G+GKTA F IL++L Y + + L+L PTRELA Q V + Sbjct: 296 GKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIAS 355 Query: 520 YLGVKVHACVGGTSVR 567 + + V C+GG S++ Sbjct: 356 FTDIMVCLCIGGLSLK 371
>UAP56_CHICK (Q5ZHZ0) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 77.8 bits (190), Expect = 2e-14 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H S F D L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA Sbjct: 38 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 97 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ + LV+ TRELA QI K Y+ VKV GG +V++ Sbjct: 98 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKK 156
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 77.4 bits (189), Expect = 3e-14 Identities = 46/109 (42%), Positives = 66/109 (60%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+++ L +LL I GF + S IQ++ I +G DVI QAQ+GTGKTA F L++ Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + QALV+APTRELA Q ++ + G GVKV + GG+S+ + Sbjct: 63 IRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEK 111
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 77.4 bits (189), Expect = 3e-14 Identities = 46/109 (42%), Positives = 66/109 (60%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+++ L +LL I GF + S IQ++ I +G DVI QAQ+GTGKTA F L++ Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + QALV+APTRELA Q ++ + G GVKV + GG+S+ + Sbjct: 63 IRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEK 111
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 77.4 bits (189), Expect = 3e-14 Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 2/110 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL--DVIQQAQSGTGKTATFCSGIL 417 F+D+GL ENLL+G+YA F KPS IQ++ + ++I Q+QSGTGKT F +L Sbjct: 101 FEDLGLDENLLKGLYAMKFNKPSKIQEKALPLLLSDPPHNMIGQSQSGTGKTGAFSLTML 160 Query: 418 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 ++D L Q + LAP+RELA+Q V+ + + + H V ++ R Sbjct: 161 SRVDPNLKAVQCICLAPSRELARQTLDVVDEMKKFTDITTHLIVPESTER 210
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 76.6 bits (187), Expect = 4e-14 Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 15/158 (9%) Frame = +1 Query: 136 EGSQFDAKNYDSKMQELL----SQGETEE------FFTSYD-----EVHESFDDMGLQEN 270 E S ++++ D+ QE+L S E EE +TS + E ++F D+G+ ++ Sbjct: 15 EESGSESEDNDAIAQEILDTTKSDNEEEEPKKSSKNYTSVEVDESEEQTKTFKDLGVIDS 74 Query: 271 LLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ 450 + F KP+ IQ + I +G D+I AQ+G+GKTA F +LQ L Sbjct: 75 ICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQSLYENPQPLY 134 Query: 451 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 +VLAPTRELA QI + ALG +G++ VGG ++ Sbjct: 135 CVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNM 172
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 76.6 bits (187), Expect = 4e-14 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 3/156 (1%) Frame = +1 Query: 109 ASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIY 288 +SA + + K+ K ++ G E + YDE + SF DM L LL+ I Sbjct: 176 SSADENILTKADTLKVKDRKKKKKKGQEAGGFFEDASQYDE-NLSFQDMNLSRPLLKAIT 234 Query: 289 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVEC---QALV 459 A GF++P+ IQ+ I G D+ A +GTGKTA F +L++L Y + + LV Sbjct: 235 AMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLV 294 Query: 460 LAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 L PTREL Q+ V R L + + VGG V+ Sbjct: 295 LVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVK 330
>UAP56_CAEEL (Q18212) Spliceosome RNA helicase BAT1 homolog (EC 3.6.1.-) (DEAD| box protein UAP56) Length = 425 Score = 76.3 bits (186), Expect = 6e-14 Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 8/145 (5%) Frame = +1 Query: 160 NYDSKMQELLSQ------GETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAI 318 +Y+ + +E+ + G+ + +Y +H S F D L+ +LR I GFE PS + Sbjct: 8 DYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEV 67 Query: 319 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEK 498 Q I G+DV+ QA+SG GKTA F LQQL+ E + + TRELA QI K Sbjct: 68 QHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127 Query: 499 VMRALGDYL-GVKVHACVGGTSVRE 570 YL GVKV GG ++++ Sbjct: 128 EYERFSKYLPGVKVAVFFGGMAIKK 152
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 75.9 bits (185), Expect = 8e-14 Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 20/169 (11%) Frame = +1 Query: 121 AGMAPEGSQFDAKNYDSKMQELLSQGETEE---------------FFTSYDEVHES--FD 249 AG E S+ D Y S+ +E+L++ +T + FF E +S F Sbjct: 131 AGSKDEDSETD---YSSEDEEILTKADTLKVKEKKKKKKGQAAGGFFEDASEYDKSLSFQ 187 Query: 250 DMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD 429 DM L LL+ I A GF++P+ IQ+ I G D+ A +GTGKTA F +L++L Sbjct: 188 DMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLI 247 Query: 430 Y---GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 Y + LVL PTREL Q+ V + L + + VGG V+ Sbjct: 248 YKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVK 296
>DBP5_YEAST (P20449) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-) (DEAD box| protein 5) (Helicase CA5/6) (Ribonucleic acid trafficking protein 8) Length = 482 Score = 75.9 bits (185), Expect = 8e-14 Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SFD++GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L +++ QA+ LAP+RELA+Q +V++ +G + Sbjct: 152 MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKF 188
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 75.9 bits (185), Expect = 8e-14 Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F MGL + LLR I+ GF+ P+ IQ++ I +G DV+ A++G+GKTA F +++ Sbjct: 70 NFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIE 129 Query: 421 QLDYGLV--ECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L L +AL+L+P RELA Q KV++ ++ A VGG S+ E Sbjct: 130 HLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEE 181
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 75.5 bits (184), Expect = 1e-13 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 1/106 (0%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F+D+GL E +L+ + GFE PS IQQ I G DV+ AQ+G+GKTA F +L Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 Q+D Q LV+APTRELA Q+ Y G ++ GG Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGG 111
>DBP5_CANAL (Q5AJD0) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 540 Score = 75.5 bits (184), Expect = 1e-13 Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 2/106 (1%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+++GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 150 KSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLT 209 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 549 +L ++D + Q L L+PTRELA+Q +V+ +G + + V Sbjct: 210 MLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVV 255
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 74.7 bits (182), Expect = 2e-13 Identities = 46/137 (33%), Positives = 72/137 (52%) Frame = +1 Query: 145 QFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQ 324 + + N S+ + G+++ +E ++F ++G+ + L GF+ P+ IQQ Sbjct: 20 KIETSNSSSEKSSENNNGDSQN-----NEAPKTFKELGVIDELCEACEKLGFKTPTPIQQ 74 Query: 325 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVM 504 I DVI AQ+G+GKTA F ++Q+L A+VLAPTRELA QI + Sbjct: 75 EAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQF 134 Query: 505 RALGDYLGVKVHACVGG 555 A+G +GV+ VGG Sbjct: 135 EAIGGSIGVRSVVIVGG 151
>SUB2_ASPFU (Q4WCW2) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 448 Score = 74.7 bits (182), Expect = 2e-13 Identities = 58/156 (37%), Positives = 75/156 (48%), Gaps = 2/156 (1%) Frame = +1 Query: 109 ASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHES-FDDMGLQENLLRGI 285 A+ A A G+Q K +L G + SY +H + F D L+ LLR I Sbjct: 21 AATTAAPAANGAQ-------DKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAI 73 Query: 286 YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLA 465 GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ EC LV+ Sbjct: 74 TDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMC 133 Query: 466 PTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 TRELA QI+ YL VK GGT +++ Sbjct: 134 HTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQK 169
>DBP5_ASPFU (Q4WIN6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 511 Score = 74.7 bits (182), Expect = 2e-13 Identities = 43/111 (38%), Positives = 69/111 (62%), Gaps = 7/111 (6%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 ++F+D+GL +L+G+ + F KPS IQ+R + +++ Q+QSGTGKTA F Sbjct: 99 KNFEDLGLDPRILKGLSSMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLN 158 Query: 412 ILQQLDYGLVEC----QALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 549 L ++D + QAL+LAPTRELA+QI V++ +G ++ G+ + A V Sbjct: 159 ALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAV 209
>SUB2_ASPOR (Q2U6P7) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 441 Score = 74.3 bits (181), Expect = 2e-13 Identities = 59/159 (37%), Positives = 76/159 (47%), Gaps = 2/159 (1%) Frame = +1 Query: 100 LPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHES-FDDMGLQENLL 276 L A A A + DA +K +L G + SY +H + F D L+ LL Sbjct: 15 LQTTDAAATTAAPAANGDA----AKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELL 70 Query: 277 RGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQAL 456 R I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ EC L Sbjct: 71 RAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVL 130 Query: 457 VLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 V+ TRELA QI+ YL VK GGT +++ Sbjct: 131 VMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQK 169
>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 771 Score = 74.3 bits (181), Expect = 2e-13 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 5/176 (2%) Frame = +1 Query: 58 DSPQRDPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLS-QGETEEFFTSYDEV 234 D +++P D + D M P Q D K + +++ + EE T+ ++ Sbjct: 200 DQDEQEPEDDDEGVEAD---MDEEYPGSDQEDEKPVEDTAEDMAEFYADEEEATTAKKQL 256 Query: 235 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 414 H +F + L +L+G+ G+ KPS IQ I G D++ A +G+GKTA + I Sbjct: 257 HTTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPI 316 Query: 415 LQQLDY---GLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 +++L Y + + +VLAPTRELA Q+ V + +G ++ + VGG ++R+ Sbjct: 317 IERLLYKPAKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQ 372
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 73.9 bits (180), Expect = 3e-13 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 3/149 (2%) Frame = +1 Query: 118 MAGMAPE-GSQFDAKNYDSKMQELLSQGETEEFFTSYDE--VHESFDDMGLQENLLRGIY 288 +A APE GS ++ + + + ET++ T+ + +SF D+G+ + L Sbjct: 9 IAHEAPEHGSDTESTSSHKSVAQQDDPLETQDEATATESRPAPKSFKDLGIIDQLCEACE 68 Query: 289 AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAP 468 G++ P+ IQ I +G D+I A++G+GKTA F ILQ L L+LAP Sbjct: 69 TMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMENPQSFFGLILAP 128 Query: 469 TRELAQQIEKVMRALGDYLGVKVHACVGG 555 TRELA QI K +LG + V+ VGG Sbjct: 129 TRELAFQISKSFESLGSTINVRCAVIVGG 157
>SUB2_DEBHA (Q6BME5) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 435 Score = 73.9 bits (180), Expect = 3e-13 Identities = 65/182 (35%), Positives = 80/182 (43%), Gaps = 2/182 (1%) Frame = +1 Query: 25 SHAAESEXLISDSPQRDPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGET 204 SH + E L D S +P +A + A EG+ + K D K Sbjct: 2 SHEGQEELL-------DYSDSEEIAVPTTTAPSAAAGEGA--NDKEADKK---------- 42 Query: 205 EEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 381 SY +H + F D L+ LLR I GFE PS +QQ I G DV+ QA+SG Sbjct: 43 ----GSYVGIHATGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSG 98 Query: 382 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 558 GKTA F LQQLD E LV+ TRELA QI Y+ VK GGT Sbjct: 99 LGKTAVFVLSTLQQLDPVPGEISTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGT 158 Query: 559 SV 564 + Sbjct: 159 PI 160
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 73.9 bits (180), Expect = 3e-13 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F D+ + +LR I G+E P+AIQ I G DV+ AQ+GTGKTA F +L Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTS 561 ++D QALVL PTRELA Q+ + G YL + V GG+S Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSS 121
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 73.6 bits (179), Expect = 4e-13 Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 11/151 (7%) Frame = +1 Query: 151 DAKNYDSKMQELLSQGETEEFFT-------SYDEVHESFDDMGLQENLLRGIYAYGFEKP 309 DA + + K++E ++ E + F+ + EVH++F+D+ L +++G+ G+ KP Sbjct: 171 DAGDAEEKVEEDTAE-EMQAFYAPESESENAKKEVHKTFNDLALSRPVMKGLSNLGYVKP 229 Query: 310 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTREL 480 S IQ I G D+I A +G+GKTA F I+++L Y + + +VL PTREL Sbjct: 230 SPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKVASTRVIVLTPTREL 289 Query: 481 AQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 A Q+ V + +G ++ + VGG ++R+ Sbjct: 290 AIQVADVGKKIGQFVSNLTFGLAVGGLNLRQ 320
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 73.6 bits (179), Expect = 4e-13 Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 4/148 (2%) Frame = +1 Query: 136 EGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSA 315 +G D D+ + EE + VH++F + L +++GI A G++ P+ Sbjct: 218 KGPAIDEGPQDTAEEMAAFYAPEEENNDKTESVHKTFQTLNLSRPVMKGISALGYQAPTP 277 Query: 316 IQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTRELAQ 486 IQ R I G D++ A +G+GKTA + +L++L Y + + +VL PTREL+ Sbjct: 278 IQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVAATKVVVLTPTRELSI 337 Query: 487 QIEKVMRALGDYL-GVKVHACVGGTSVR 567 Q+ V + L Y+ GV+ VGG ++R Sbjct: 338 QVADVGKKLAQYVSGVRFGLAVGGLNLR 365
>SUB2_EMENI (Q5ASK8) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 451 Score = 73.6 bits (179), Expect = 4e-13 Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 2/132 (1%) Frame = +1 Query: 181 ELLSQGETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 357 EL G + SY +H + F D L+ LLR I GFE PS +QQ I +D Sbjct: 39 ELTVTGGRADKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVD 98 Query: 358 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVK 534 V+ QA+SG GKTA F L QL+ EC LV+ TRELA QI+ YL VK Sbjct: 99 VLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVK 158 Query: 535 VHACVGGTSVRE 570 GGT +++ Sbjct: 159 TAVFYGGTPIQK 170
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 73.6 bits (179), Expect = 4e-13 Identities = 50/156 (32%), Positives = 76/156 (48%) Frame = +1 Query: 88 PRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQE 267 PR+ P A A D ++ + L + EE T+ D ++F D+G+ + Sbjct: 14 PRNTKPVAQEKPARAEPKPSSDEESEEESAT--LEEPSAEE--TAVDAPKKTFKDLGVND 69 Query: 268 NLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVEC 447 L ++ P+ IQ++ I +G D+I A++G+GKTA F +LQ L Sbjct: 70 ALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAFALPVLQALLDKPQPL 129 Query: 448 QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 LVLAPTRELA QI + ALG + ++ VGG Sbjct: 130 FGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGG 165
>DBP5_ASHGO (Q75C39) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 467 Score = 73.2 bits (178), Expect = 5e-13 Identities = 40/97 (41%), Positives = 66/97 (68%), Gaps = 2/97 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGI--VPFCKGLDVIQQAQSGTGKTATFCSG 411 +SF+++GL LL+G+YA F+KPS IQ+R + + + ++I Q+QSGTGKTA F Sbjct: 79 KSFEELGLAPELLKGLYAMKFQKPSKIQERALPLLLYNPPRNMIAQSQSGTGKTAAFSLT 138 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L ++D + QA+ LAP+R LA+Q +V++ +G + Sbjct: 139 MLSRVDVAVPATQAICLAPSR-LARQTLEVIQEMGKF 174
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 73.2 bits (178), Expect = 5e-13 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 14/159 (8%) Frame = +1 Query: 136 EGSQFD---AKNYDSKMQELLSQGETEEFFTSYDE-------VHESFDDMGLQENLLRGI 285 E SQ D K+ D ++E + E EF+ +E VH++F+ + L +L+G+ Sbjct: 190 EMSQADLGKGKDEDEDIEEDTKE-EMAEFYAPEEESADAKKIVHKTFNSLSLSRPVLKGL 248 Query: 286 YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVECQAL 456 + G+ PS IQ I G D+I A +G+GKTA F I+++L Y + + + Sbjct: 249 GSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAHIASTRVV 308 Query: 457 VLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 VL PTRELA Q+ V + +G ++ G+ VGG ++R+ Sbjct: 309 VLTPTRELAIQVADVGKNIGKFVNGLTFGLAVGGLNLRQ 347
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 73.2 bits (178), Expect = 5e-13 Identities = 44/106 (41%), Positives = 59/106 (55%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 +SF ++GL E L + G++ P+AIQ I +G D+I A++G+GKTA F IL Sbjct: 52 KSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL 111 Query: 418 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 Q L LVLAPTRELA QI + LG + V+ VGG Sbjct: 112 QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGG 157
>SUB2_ASHGO (Q759L6) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 438 Score = 72.8 bits (177), Expect = 6e-13 Identities = 50/119 (42%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H + F D L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 47 SYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTA 106 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQLD E +VL RELA QI Y+ VK GGT R+ Sbjct: 107 VFVLSTLQQLDPVPGEVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTDTRK 165
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 72.8 bits (177), Expect = 6e-13 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 10/164 (6%) Frame = +1 Query: 106 DASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVH-------ESFDDMGLQ 264 D+ A P+ DA + + +E + + + FF +E + SF M L Sbjct: 208 DSVATPTNHPDDDASDASDDEEDAEE---EAKRKAFFAPEEENNPDKKATASSFQTMSLS 264 Query: 265 ENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---G 435 ++RG+ + GF KP+ IQ + I G DV+ A++G+GKT F IL++L Y Sbjct: 265 RPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPKK 324 Query: 436 LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 + + +VL PTRELA Q V L + +K VGG S++ Sbjct: 325 IPTTRVVVLLPTRELAIQCHAVATKLAAFTDIKFTLAVGGLSLK 368
>SUB2_SCHPO (O13792) ATP-dependent RNA helicase uap56 (EC 3.6.1.-)| Length = 434 Score = 72.4 bits (176), Expect = 8e-13 Identities = 51/127 (40%), Positives = 66/127 (51%), Gaps = 2/127 (1%) Frame = +1 Query: 196 GETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 372 GE + SY +H + F D L+ LLR I GFE PS +QQ I G DV+ QA Sbjct: 36 GEKSDKKGSYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQA 95 Query: 373 QSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 549 +SG GKTA F LQQ++ E LVL TRELA QI+ YL V+ Sbjct: 96 KSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFY 155 Query: 550 GGTSVRE 570 GG ++++ Sbjct: 156 GGINIKQ 162
>SUB2_KLULA (Q6CM95) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 437 Score = 72.4 bits (176), Expect = 8e-13 Identities = 51/128 (39%), Positives = 62/128 (48%), Gaps = 2/128 (1%) Frame = +1 Query: 190 SQGETEEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQ 366 SQ + + SY +H + F D L+ L R I GFE PS +QQ I G DV+ Sbjct: 36 SQAKDSDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLC 95 Query: 367 QAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHA 543 QA+SG GKTA F LQQLD E +VL RELA QI Y+ VK Sbjct: 96 QAKSGLGKTAVFVLSTLQQLDPVQGEVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAV 155 Query: 544 CVGGTSVR 567 GGT + Sbjct: 156 FYGGTEYK 163
>UAP56_DROME (Q27268) ATP-dependent RNA helicase WM6 (EC 3.6.1.-) (DEAD box| protein UAP56) (HEL/UAP56) Length = 424 Score = 72.4 bits (176), Expect = 8e-13 Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 3/120 (2%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 +Y +H S F D L+ +LR I GFE PS +Q I G+D++ QA+SG GKTA Sbjct: 34 TYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 93 Query: 397 TFCSGILQQLD-YGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 F LQQL+ C LV+ TRELA QI K Y+ VKV GG ++++ Sbjct: 94 VFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQK 153
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 72.0 bits (175), Expect = 1e-12 Identities = 44/104 (42%), Positives = 58/104 (55%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F D+G+ ++ GF+ P+ IQ + I + DVI AQ+G+GKTA F ILQ Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 L A VLAPTRELA QI + + ALG +GV+ VGG Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGG 209
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 71.6 bits (174), Expect = 1e-12 Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 14/193 (7%) Frame = +1 Query: 34 AESEXLISDSPQRDPSGDPRHLLPDASAMAGMAPE--GSQFDAKNYDSKMQELLSQGETE 207 +E E SDS D D D+ A P+ S D + +S++ + + + + Sbjct: 224 SEDEHAGSDSEDSDDDDDDAASDNDSVATPVQHPDDVASDNDGSDIESEV-DAEEEAKRK 282 Query: 208 EFFTSYDEVHE---------SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 360 FF ++ E SF + L +LRG+ A F P+ IQ++ I G D+ Sbjct: 283 AFFAPEEQTSEQSAAELSKKSFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDI 342 Query: 361 IQQAQSGTGKTATFCSGILQQLDY---GLVECQALVLAPTRELAQQIEKVMRALGDYLGV 531 + A +G+GKTA F IL++L + + + +L PTRELA Q V L Y + Sbjct: 343 VGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDI 402 Query: 532 KVHACVGGTSVRE 570 VGG S+RE Sbjct: 403 TFCQLVGGFSLRE 415
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 71.6 bits (174), Expect = 1e-12 Identities = 41/110 (37%), Positives = 62/110 (56%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 + V ++F D+G+ + L G++ P+ IQ++ I + D+I A++G+GKTA F Sbjct: 86 ETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFA 145 Query: 406 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 ILQ L ALVLAPTRELA QI + ALG + ++ +GG Sbjct: 146 LPILQALLDKPAPLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGG 195
>DBP5_DEBHA (Q6BRE4) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 493 Score = 71.2 bits (173), Expect = 2e-12 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+++GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F Sbjct: 103 KSFEELGLSSELLKGLYAMKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLT 162 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L ++D Q + LAP RELA+Q +V+ + + Sbjct: 163 MLSRVDESDPNTQCICLAPARELARQTLEVITTMSKF 199
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 71.2 bits (173), Expect = 2e-12 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F MGL + +GI G++ P+ IQ++ I G DV+ A++G+GKTA F + ++ Sbjct: 97 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 156 Query: 424 LDYGLVE--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L + +AL+L+PTRELA Q K + LG + G+K +GG + + Sbjct: 157 LKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMED 207
>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 437 Score = 71.2 bits (173), Expect = 2e-12 Identities = 41/109 (37%), Positives = 58/109 (53%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 ++F +GL + L+ + A P+AIQ I KG D I A++G+GKT F +L Sbjct: 9 QNFRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPML 68 Query: 418 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 Q +VL PTRELA QI + ALG Y+ ++V VGG S+ Sbjct: 69 TQWSEDPTGMFGIVLTPTRELAMQIAEQFTALGSYMNIRVALVVGGESI 117
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 70.9 bits (172), Expect = 2e-12 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 3/169 (1%) Frame = +1 Query: 73 DPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDD 252 D P H D +A + S+ DA+ + + EE T+ + SF D Sbjct: 259 DSVATPVHHPDDEAASDEESEAESEVDAEEAEKRKAFFAP----EEKSTAVSTFNRSFQD 314 Query: 253 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 432 L +LRG+ + F P+ IQQ+ I G D++ A +G+GKTA F IL++L + Sbjct: 315 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLF 374 Query: 433 ---GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + +L PTRELA Q V L + + VGG S+RE Sbjct: 375 RPRKVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQLVGGFSLRE 423
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 70.5 bits (171), Expect = 3e-12 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F MGL + +GI G++ P+ IQ++ I G DV+ A++G+GKTA F + ++ Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157 Query: 424 LDYGLVE--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L + +AL+L+PTRELA Q K + LG + G+K +GG + + Sbjct: 158 LKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMED 208
>SUB2_YEAST (Q07478) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-) (Suppressor| of BRR1 protein 2) Length = 446 Score = 70.5 bits (171), Expect = 3e-12 Identities = 60/182 (32%), Positives = 78/182 (42%), Gaps = 2/182 (1%) Frame = +1 Query: 25 SHAAESEXLISDSPQRDPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGET 204 SH E + L + S + + + DAS A G+ A D+ + Sbjct: 2 SHEGEEDLL-------EYSDNEQEIQIDASKAAEAGETGAATSATEGDNNNNTAAGDKKG 54 Query: 205 EEFFTSYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 381 SY +H + F D L+ L R I GFE PS +QQ I G DV+ QA+SG Sbjct: 55 -----SYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSG 109 Query: 382 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 558 GKTA F LQQLD E +V+ RELA QI Y+ VK GGT Sbjct: 110 LGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGT 169 Query: 559 SV 564 + Sbjct: 170 PI 171
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 70.5 bits (171), Expect = 3e-12 Identities = 41/91 (45%), Positives = 53/91 (58%) Frame = +1 Query: 298 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 477 F KP+ IQ I +G D+I AQ+G+GKTA F ILQ L + ALVLAPTRE Sbjct: 3 FTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPYFALVLAPTRE 62 Query: 478 LAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 LA QI+ ALG +G++ VGG + + Sbjct: 63 LAFQIKDTFDALGSSMGLRSSCIVGGMDMMD 93
>DBP10_NEUCR (Q7S9J4) ATP-dependent RNA helicase dbp-10 (EC 3.6.1.-)| Length = 934 Score = 70.5 bits (171), Expect = 3e-12 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F MGL +LLR I GF P+ IQ++ I + DV+ A++G+GKTA F ++++ Sbjct: 101 FQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIER 160 Query: 424 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L V +AL+++P+RELA Q KV++ LG +K VGG S+ E Sbjct: 161 LKGHSPRVGSRALIMSPSRELALQTLKVVKELGRGTDLKTVLLVGGDSLEE 211
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 70.5 bits (171), Expect = 3e-12 Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F MGL +LL+ I GF P+ IQ++ I G DV+ A++G+GKTA F ++++ Sbjct: 91 FQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEK 150 Query: 424 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L V + L+L+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 151 LKSHSTKVGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEE 201
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 70.5 bits (171), Expect = 3e-12 Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 7/115 (6%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF M L LLR + + F P+ IQ R I G D++ A +G+GKTA F IL+ Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282 Query: 421 QLDY-----GLVECQALVLAPTRELAQQIEKVMRALGDY--LGVKVHACVGGTSV 564 +L Y G C+ LVL PTRELA Q E V +AL + L V+ VGG S+ Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSL 337
>DBP10_EMENI (Q5BFU7) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 936 Score = 70.1 bits (170), Expect = 4e-12 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F MGL NLL+ I GF P+ IQ++ I + DV+ A++G+GKTA F ++++ Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152 Query: 424 LDYGLVE--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L + + L+L+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 153 LKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEE 203
>DDX25_MOUSE (Q9QY15) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 484 Score = 70.1 bits (170), Expect = 4e-12 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 ++F+++ L+E LL+GIYA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 98 KTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLA 157 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSV 564 +L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + Sbjct: 158 MLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRI 209
>SUB2_CRYNE (Q5KNA3) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 442 Score = 70.1 bits (170), Expect = 4e-12 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 2/117 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H + F D L+ LLR I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 52 SYVGIHSTGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTA 111 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSV 564 F LQQ++ E ++L TRELA QI+ ++ V+ GGT + Sbjct: 112 VFVLAALQQIEPVDGEVSIIILCHTRELAYQIKNEFTRFSKFMTNVRTGVFYGGTPI 168
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 70.1 bits (170), Expect = 4e-12 Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Frame = +1 Query: 232 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 411 + +F +GL +++ + G+ KPS IQ I +G DV+ AQ+G+GKTA F Sbjct: 4 IESTFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLP 63 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGG 555 +L L+ L Q LVLAPTRELA Q+ + Y +G+ V GG Sbjct: 64 LLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGG 112
>DDX25_RAT (Q9QY16) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 70.1 bits (170), Expect = 4e-12 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 ++F+++ L+E LL+GIYA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLA 156 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSV 564 +L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + Sbjct: 157 MLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRI 208
>DDX25_HUMAN (Q9UHL0) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 70.1 bits (170), Expect = 4e-12 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 ++F+++ L+E LL+GIYA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLA 156 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSV 564 +L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + Sbjct: 157 MLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRI 208
>DBP10_ASPFU (Q8NJM2) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 869 Score = 69.7 bits (169), Expect = 5e-12 Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F MGL NLL+ I GF P+ IQ++ I DV+ A++G+GKTA F ++++ Sbjct: 72 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 131 Query: 424 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L V + LVL+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 132 LKSHSTKVGARGLVLSPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEE 182
>DD19B_HUMAN (Q9UMR2) ATP-dependent RNA helicase DDX19B (EC 3.6.1.-) (DEAD box| protein 19B) (DEAD box RNA helicase DEAD5) Length = 479 Score = 69.7 bits (169), Expect = 5e-12 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+++ L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 92 KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLA 151 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L Q++ Q L L+PT ELA Q KV+ +G + Sbjct: 152 MLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKF 188
>SUB2_CANGA (Q6FL17) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 439 Score = 69.3 bits (168), Expect = 7e-12 Identities = 47/117 (40%), Positives = 58/117 (49%), Gaps = 2/117 (1%) Frame = +1 Query: 220 SYDEVHES-FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 SY +H + F D L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA Sbjct: 48 SYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTA 107 Query: 397 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSV 564 F LQQLD E +V+ RELA QI Y+ V+ GGT + Sbjct: 108 VFVLSTLQQLDPVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVRTAVFYGGTPI 164
>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency| of ribosomal subunits protein 1) Length = 752 Score = 69.3 bits (168), Expect = 7e-12 Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 4/118 (3%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 +++E+F+ + L +L+G+ + G+ KPS IQ I G D+I A +G+GKTA F Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287 Query: 409 GILQQLDY---GLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 I+++L Y + + +VL PTRELA Q+ V + + ++ G+ VGG ++R+ Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQ 345
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 69.3 bits (168), Expect = 7e-12 Identities = 43/110 (39%), Positives = 59/110 (53%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 +E ++F D+G+ + L G+ KP+ IQ I +G D+I A++G+GKT F Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79 Query: 406 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 IL L ALVL PTRELA QI + ALG +GV+ VGG Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGG 129
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 69.3 bits (168), Expect = 7e-12 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 1/106 (0%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F +GL +++ + G+ KPS IQ I +G DV+ AQ+G+GKTA F +L Sbjct: 7 TFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLH 66 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGG 555 L+ L Q LVLAPTRELA Q+ + Y +G+ V GG Sbjct: 67 NLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGG 112
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 68.9 bits (167), Expect = 9e-12 Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 5/178 (2%) Frame = +1 Query: 49 LISDSPQRDPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYD 228 + + PQ + + DA + E + D +N D ++Q+ ++ + S Sbjct: 32 IAEELPQDEDDYEQEEENEDADQNTSVESESEELDNENEDERVQKSVNLNAS-----STS 86 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 ++ E F D+ L EN+ + I GFE + IQ+R I P G DV+ A++G+GKT F Sbjct: 87 DI-EKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLI 145 Query: 409 GILQQLDYGLV-----ECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 ++ L Y L ++++PTRELA QI V + L Y +GG + R Sbjct: 146 PTIEML-YALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRR 202
>DBP4_EMENI (Q5BFU1) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 812 Score = 68.9 bits (167), Expect = 9e-12 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 7/119 (5%) Frame = +1 Query: 235 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 414 +ESF D+ + E L G+ + F+ + IQ R I KG DV+ A++G+GKT F I Sbjct: 47 YESFSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPI 106 Query: 415 LQQL------DY-GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L+ L D+ GL AL+++PTRELA QI +V+R +G Y +GG S++E Sbjct: 107 LENLYRKQWSDHDGL---GALIISPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKE 162
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 68.9 bits (167), Expect = 9e-12 Identities = 43/110 (39%), Positives = 59/110 (53%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 +E ++F D+G+ + L G+ KP+ IQ I +G D+I A++G+GKT F Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79 Query: 406 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 IL L ALVL PTRELA QI + ALG +GV+ VGG Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGG 129
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 68.6 bits (166), Expect = 1e-11 Identities = 43/113 (38%), Positives = 59/113 (52%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 D +SF ++G+ + L G+ KPS IQQ + +G DVI A++G+GKT F Sbjct: 40 DVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFA 99 Query: 406 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 +LQ L LVL PTRELA QI + ALG +G+ VGG + Sbjct: 100 IPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 68.6 bits (166), Expect = 1e-11 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 7/111 (6%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F D L L+ I+ GF + IQ + + +G D I +AQ+GTGKTA F I+ Q Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70 Query: 424 L-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 L + + E +AL++APTREL QI K AL Y G+ V + VGG Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGG 121
>DBP10_YARLI (Q6C7X8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 926 Score = 68.6 bits (166), Expect = 1e-11 Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 2/112 (1%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF +GL + +L+ I GF++P+ IQ++ I +G DV+ A++G+GKTA F +L+ Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162 Query: 421 QLDY--GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +L V +A++L+P+RELA Q KV++ +++ VGG S+ E Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEE 214
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 68.2 bits (165), Expect = 2e-11 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%) Frame = +1 Query: 220 SYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 399 S ++ SF L +LR + + F KP+ IQ R I G D++ A +G+GKTA Sbjct: 327 STNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAA 386 Query: 400 FCSGILQQLDYGL-------VECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 558 F +++L + + + L+LAPTRELA Q V +++ + ++ CVGG Sbjct: 387 FMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGL 446 Query: 559 SVR 567 SV+ Sbjct: 447 SVK 449
>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)| Length = 676 Score = 67.8 bits (164), Expect = 2e-11 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 14/144 (9%) Frame = +1 Query: 133 PEGSQFDAKNYDSKMQELLSQ---------GETEEFFTSYDEVHESFDDMGLQENLLRGI 285 PE +Q A+ + QEL Q + E+ + D+ +F D+GL L++ + Sbjct: 51 PEATQQQAQQQTEEEQELEQQLKDEQKQQDEKDEKKQSEKDDADLTFSDLGLDPRLVQAV 110 Query: 286 YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF----CSGILQQLDYGLVE-CQ 450 FEKP+ +Q++ I G DV+ +A++G+GKTA + SGIL++ Sbjct: 111 AKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVLSGILKRKATDPTPFTS 170 Query: 451 ALVLAPTRELAQQIEKVMRALGDY 522 AL+L PTRELA Q+ K + A + Sbjct: 171 ALILVPTRELADQVHKAIDAFSAF 194
>DD19A_MOUSE (Q61655) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DEAD box RNA helicase DEAD5) (mDEAD5) (Eukaryotic translation initiation factor 4A-related sequence 1) Length = 478 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+++ L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLA 150 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L +++ Q L L+PT ELA Q KV+ +G + Sbjct: 151 MLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKF 187
>DD19A_HUMAN (Q9NUU7) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DDX19-like protein) Length = 478 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 +SF+++ L+ LL+G+YA GF +PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLA 150 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L +++ Q L L+PT ELA Q KV+ +G + Sbjct: 151 MLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKF 187
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 67.8 bits (164), Expect = 2e-11 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 7/111 (6%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F D L +L+ I+ GF + IQ + + +G D I +AQ+GTGKTA F I+ Q Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70 Query: 424 L-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 L + + E +AL++APTREL QI K AL Y G+ V VGG Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGG 121
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 67.4 bits (163), Expect = 3e-11 Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 7/121 (5%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 E ++SF D+ L E G+ + F+ + IQ R I KG D++ A++G+GKT F Sbjct: 42 ETYKSFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLI 101 Query: 409 GILQQL-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 +L+ L GL AL+L+PTRELA QI +V+R +G Y +GG S++ Sbjct: 102 PVLENLYRKQWSEHDGL---GALILSPTRELAIQIFEVLRKIGRYHTFSAGLIIGGKSLK 158 Query: 568 E 570 E Sbjct: 159 E 159
>DBP80_DROME (O61305) DEAD-box helicase Dbp80 (EC 3.6.1.-)| Length = 460 Score = 67.0 bits (162), Expect = 4e-11 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSG 411 ++F+ + L+ +LL+GIYA GF PS IQ+ + ++I Q+QSGTGKTA F Sbjct: 73 KTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 132 Query: 412 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSV 564 +L +++ L Q L L+PT ELA Q +V +G + +K+ V G V Sbjct: 133 MLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEV 184
>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 442 Score = 67.0 bits (162), Expect = 4e-11 Identities = 42/108 (38%), Positives = 56/108 (51%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF D+GL E L + KPSAIQ+ I KG D I A++G+GKT F + +L Sbjct: 2 SFTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLA 61 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 + LVL PTRELA QI + ALG + ++V GG + Sbjct: 62 EWSKDPCGIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDM 109
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 66.6 bits (161), Expect = 5e-11 Identities = 39/108 (36%), Positives = 56/108 (51%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF+++G+ + L + + P+ IQ I KG D I A++G+GKT F + +L Sbjct: 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLT 61 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 Q LVL PTRELA QI + ALG + +KV VGG + Sbjct: 62 QWSEDPSGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDI 109
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 66.2 bits (160), Expect = 6e-11 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F ++ L E+LL + GF +P+AIQ I P G DV+ A +GTGKTA + LQ Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64 Query: 421 Q-LDYGLVEC---QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 561 LD+ + + L+L PTRELA Q+ R L + + + GG + Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVA 115
>DBP8_CANAL (Q59PR3) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 440 Score = 66.2 bits (160), Expect = 6e-11 Identities = 41/105 (39%), Positives = 56/105 (53%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF+D+G+ + L + A P+AIQ I KG D I A++G+GKT F + +L Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 Q L+L PTRELA QI + ALG + +KV VGG Sbjct: 62 QWSEDPFGIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGG 106
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 65.9 bits (159), Expect = 8e-11 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 1/95 (1%) Frame = +1 Query: 274 LRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQA 453 L + G+ + +Q + G DV QA++G+GKTA F G+LQQ+D L + QA Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA 74 Query: 454 LVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 LVL PTRELA Q+ +R L +L K+ GG Sbjct: 75 LVLCPTRELADQVAGELRRLARFLPNTKILTLCGG 109
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 65.5 bits (158), Expect = 1e-10 Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 7/193 (3%) Frame = +1 Query: 10 RHRLRSHAAESEXLISDSPQRDPS---GDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQ 180 + R SHA+ E S Q P+ GD D + + A G D K D++ Sbjct: 66 KKRKVSHASSDEGDESQEEQGAPAQADGDSDDNKDDGNDQSE-AENGDNGDKK--DTEST 122 Query: 181 ELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 360 +L S G + + + F ++GL E L+ I GFE + IQ+R I P G DV Sbjct: 123 DLPSAGTLS--LPTVEGEPQKFTELGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDV 180 Query: 361 IQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLG 528 + A++G+GKT +F ++ L + + +V++PTRELA QI V R L Y Sbjct: 181 LGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHS 240 Query: 529 VKVHACVGGTSVR 567 +GG + R Sbjct: 241 QTYGIVIGGANRR 253
>DBP9_SCHPO (O60080) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 595 Score = 65.5 bits (158), Expect = 1e-10 Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 6/98 (6%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 ++F D L L R I+ FEKP+++Q I +G D++ QA++G+GKTA + IL Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPIL 73 Query: 418 Q------QLDYGLVECQALVLAPTRELAQQIEKVMRAL 513 + Q+D AL+L PTRELAQQ+ V+ L Sbjct: 74 ELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKL 111
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/104 (39%), Positives = 56/104 (53%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F ++GL L+ G ++P+ +Q I +G D + A++G+GKTA F ILQ+ Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 L LVL PTRELA QI + R LG LG+K VGG Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGG 107
>DBP8_CRYNE (Q5KPU1) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 619 Score = 64.7 bits (156), Expect = 2e-10 Identities = 35/105 (33%), Positives = 56/105 (53%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F+ +GL L+ + + +KP+ IQ + P G D I A++G+GKT F I++ Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 ++ A+VL PTRELA Q+ + +G LG+ VGG Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGG 257
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 64.7 bits (156), Expect = 2e-10 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 5/118 (4%) Frame = +1 Query: 232 VHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 411 + +SF D+ L E G+ + ++ + IQ R I KG D++ A++G+GKT F Sbjct: 45 IFKSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVP 104 Query: 412 ILQQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +L+ L Y + AL+L+PTRELA QI +V+R +G Y +GG S++E Sbjct: 105 VLENL-YRKQWAEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKE 161
>DRS1_CANAL (Q5ACK7) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 613 Score = 64.7 bits (156), Expect = 2e-10 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = +1 Query: 217 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 396 +S + H SF + L +L+GI F KP+ IQ I G D++ AQ+G+GKT Sbjct: 123 SSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTG 182 Query: 397 TFCSGILQQLDY-GLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 570 + I+++L Y + ++L PTRELA Q+ + + L ++ + + VGG ++R+ Sbjct: 183 AYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQ 242
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 64.7 bits (156), Expect = 2e-10 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 E+FD+ G + +L + A GFE+P+AIQ +G G DV+ A++G+GKT T+C + Sbjct: 121 ENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 180 Query: 418 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 ++ + L+LAPTRELA QI+ + G ++ + CV G Sbjct: 181 VHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYG 230
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 64.7 bits (156), Expect = 2e-10 Identities = 41/104 (39%), Positives = 56/104 (53%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F ++GL L+ G ++P+ +Q I +G D + A++G+GKTA F ILQ+ Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 L LVL PTRELA QI + R LG LG+K VGG Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGG 107
>DBP8_SCHPO (Q9HGM5) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 453 Score = 64.3 bits (155), Expect = 2e-10 Identities = 39/110 (35%), Positives = 60/110 (54%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 + +SF D+G+ L+ + A +P+ IQ+ I +G + I A++G+GKTA F Sbjct: 3 EHTRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFA 62 Query: 406 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 I+++ AL+L PTRELA QI++ ALG L +K VGG Sbjct: 63 LPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGG 112
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 64.3 bits (155), Expect = 2e-10 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 5/153 (3%) Frame = +1 Query: 127 MAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVH-ESFDDMGLQENLLRGIYAYGFE 303 M + ++ DA K Q S+ E + H E FD++ L L+ I GF Sbjct: 1 MGAQETREDASGSSKKRQRPESEVAAESDAAASSTAHAEKFDELNLSSQTLKAIGKMGFT 60 Query: 304 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPT 471 K + +Q R I P G DV+ A++G+GKT F ++ L + + +V+ PT Sbjct: 61 KMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKFKPRNGTGVIVITPT 120 Query: 472 RELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 RELA QI V R L ++ +GG + R+ Sbjct: 121 RELALQIFGVARELMEFHSQTFGIVIGGANRRQ 153
>DBP8_YEAST (P38719) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-) (DEAD box| protein 8) Length = 431 Score = 64.3 bits (155), Expect = 2e-10 Identities = 38/107 (35%), Positives = 56/107 (52%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F +GL + L + A +P+AIQ+ I +G D I A++G+GKT F +L + Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 +VL PTRELA QI + ALG + ++V VGG S+ Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESI 110
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 64.3 bits (155), Expect = 2e-10 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 E+FD+ G + +L + A GFEKP+AIQ +G G DV+ A++G+GKT ++C + Sbjct: 140 ETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 199 Query: 418 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 ++ + L+LAPTRELA QI+ + G ++ + CV G Sbjct: 200 VHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYG 249
>HAS1_DEBHA (Q6BH93) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 568 Score = 63.9 bits (154), Expect = 3e-10 Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 12/197 (6%) Frame = +1 Query: 16 RLRSHAAESEXLISDSPQRDPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQELLSQ 195 R R H ES SDS + D L D +A + + + D K ++ + + Sbjct: 27 RKREHEEES----SDSSESDNEKLVEELDDDFDEVAELLGDDIKDPEAKKDKKKEKKIQE 82 Query: 196 GETEEFFTSY-------DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 354 E T D V ++F++ GL E L+ I GF K + +Q + I P G Sbjct: 83 EERTRELTKPTAESNHDDIVTDNFEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGR 142 Query: 355 DVIQQAQSGTGKTATFCSGILQQLDYGL-----VECQALVLAPTRELAQQIEKVMRALGD 519 DV+ A++G+GKT F ++ L Y L +V++PTRELA QI V R L Sbjct: 143 DVLGAAKTGSGKTLAFLIPAIEML-YSLRFKPRNGTGVVVVSPTRELALQIFGVARELMA 201 Query: 520 YLGVKVHACVGGTSVRE 570 + +GG + R+ Sbjct: 202 HHSQTFGIVIGGANRRQ 218
>DBP10_GIBZE (Q4HZ42) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 897 Score = 63.9 bits (154), Expect = 3e-10 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F MGL NLL+ I GF P+ IQ++ I D++ A++G+GKTA F ++++ Sbjct: 84 FQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIEK 143 Query: 424 L--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L +AL+++P+RELA Q KV++ +K VGG S+ E Sbjct: 144 LRAHSARFGTRALIMSPSRELAIQTLKVVKEFSRGTDLKCVLLVGGDSLEE 194
>DBP45_DROME (Q07886) Probable ATP-dependent RNA helicase Dbp45A (EC 3.6.1.-)| (DEAD box protein 45A) Length = 521 Score = 63.5 bits (153), Expect = 4e-10 Identities = 40/105 (38%), Positives = 56/105 (53%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F +GL+ L++ + G + + IQQ+ I G D I A++G+GKT F IL++ Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 558 L V ALVL PT ELA QI + G +GV+V GGT Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGT 113
>DBP9_ASPFU (Q4X0C2) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 649 Score = 63.5 bits (153), Expect = 4e-10 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 6/121 (4%) Frame = +1 Query: 199 ETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQS 378 E EE + D + F+ + L L + + F KP+ +Q + I +G D++ +A++ Sbjct: 44 EVEEEKNTKDADNTDFESLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKT 103 Query: 379 GTGKTATFCSGILQQL------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 540 G+GKTA + ILQ + D L L+L PTRELA+Q++ V+ + G V Sbjct: 104 GSGKTAAYVLPILQTILQKKAADPSLKATTGLILVPTRELAEQVQSVIIKFSAFCGKDVR 163 Query: 541 A 543 + Sbjct: 164 S 164
>DBP9_EMENI (Q5AZA6) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 610 Score = 63.5 bits (153), Expect = 4e-10 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 E F+ + L L + + F KP+ +Q + I +G D++ +A++G+GKTA + IL Sbjct: 28 EDFETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPIL 87 Query: 418 Q------QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 543 Q +D + L+L PTRELA+Q++KV+ + G V + Sbjct: 88 QTILQKKAIDPSMKATTGLILVPTRELAEQVQKVITTFAAFCGKDVRS 135
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 63.5 bits (153), Expect = 4e-10 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 12/119 (10%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL- 417 S+ D L ++L I G+++P+ IQ++ I + D+I A++G+GKTA F +L Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLV 451 Query: 418 -----------QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 561 ++ D G A++LAPTRELAQQIE+ G LG++ A +GG S Sbjct: 452 WITTLPKIDRIEESDQGPY---AIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGIS 507
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 63.5 bits (153), Expect = 4e-10 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 12/119 (10%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL- 417 S+ D L ++L I G+++P+ IQ++ I + D+I A++G+GKTA F +L Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLV 451 Query: 418 -----------QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 561 ++ D G A++LAPTRELAQQIE+ G LG++ A +GG S Sbjct: 452 WITTLPKIDRIEESDQGPY---AIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGIS 507
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 63.5 bits (153), Expect = 4e-10 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 8/112 (7%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC-KGLDVIQQAQSGTGKTATFCSGILQ 420 F D L L+ I GF + IQ G++ F KG D I +AQ+GTGKTA F I++ Sbjct: 10 FHDFNLAPELMHAIQDLGFPYCTPIQA-GVLGFTLKGKDAIGRAQTGTGKTAAFLISIIE 68 Query: 421 QL-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 QL + + E +AL++APTREL QI K L Y + V VGG Sbjct: 69 QLTQTPPPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGG 120
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 63.5 bits (153), Expect = 4e-10 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 E+FD+ G + +L + A GFE+P+AIQ +G G DV+ A++G+GKT ++C + Sbjct: 130 ETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 189 Query: 418 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 ++ + LVLAPTRELA QI+ + G ++ + CV G Sbjct: 190 VHINAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIR-NTCVYG 239
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 63.2 bits (152), Expect = 5e-10 Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 1/106 (0%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F GL ++ + G+ +PS IQ I KG DV+ AQ+G+GKTA F +L Sbjct: 7 TFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLH 66 Query: 421 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGG 555 + + Q LVL PTRELA Q+ + L GV V A GG Sbjct: 67 NIKLDVRVPQILVLTPTRELAVQVAEAFSNFSKKLIGVHVLALYGG 112
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 63.2 bits (152), Expect = 5e-10 Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 4/113 (3%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 +F D+ + ++G+ + K + IQ+ I KG DV+ A++G+GKT F +L+ Sbjct: 42 TFQDLPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLE 101 Query: 421 QLDY----GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 +L + L ALV++PTRELA QI +V+ +G Y+ +GG V+ Sbjct: 102 KLYHERWTELDGLGALVISPTRELAMQIYEVLVKIGKYMSFSAGLVIGGKDVK 154
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 63.2 bits (152), Expect = 5e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 418 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 63.2 bits (152), Expect = 5e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 418 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 63.2 bits (152), Expect = 5e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 418 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 63.2 bits (152), Expect = 5e-10 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 +S+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431 Query: 418 QQL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + L E + A+++ PTRELA QI K + LG++V GGT + E Sbjct: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 62.8 bits (151), Expect = 7e-10 Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG-LDVIQQAQSGTGKTATFCSGIL 417 +F+++ L +N+L I GFEKP+ IQ + I F +++ QA++G+GKTA+F ++ Sbjct: 7 NFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLI 66 Query: 418 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 + ++ +A++L PTRELA Q+ + +L +K+ GG ++ Sbjct: 67 ELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAI 114
>DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 908 Score = 62.8 bits (151), Expect = 7e-10 Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 5/181 (2%) Frame = +1 Query: 43 EXLISDSPQRDPSGDPRHLL-PDASAMAGMA---PEGSQFDAKNYDSKMQELLSQGETEE 210 + +I +++PS P+ P+ A + EG+ D + DSK+ Sbjct: 34 DEIIPSDDEKEPSPPPKKKSKPNPQAFPSLELSDNEGNNDDDDDDDSKINSYFINNNP-- 91 Query: 211 FFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK 390 T+ SF GL + +L I G+++P+ IQ++ I +G DV+ A++G+GK Sbjct: 92 --TAKKAKAGSFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGK 149 Query: 391 TATFCSGILQQLDYGLV-ECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 TA F ++++L +A++L+P+RELA Q K ++ ++ +GG S+ Sbjct: 150 TAAFVLPLIERLKSRQPGGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLE 209 Query: 568 E 570 E Sbjct: 210 E 210
>DBP8_KLULA (Q6CXW0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 62.8 bits (151), Expect = 7e-10 Identities = 37/110 (33%), Positives = 56/110 (50%) Frame = +1 Query: 235 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 414 + F +G + L+ + A +P+AIQ+ I KG D I A +G+GKT F + + Sbjct: 3 NSEFKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPM 62 Query: 415 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 L + +VL PTRELA QI + A G + ++V VGG S+ Sbjct: 63 LTKWSEDPQGMFGIVLTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESI 112
>DDX28_MOUSE (Q9CWT6) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)| (Mitochondrial DEAD box protein 28) Length = 540 Score = 62.8 bits (151), Expect = 7e-10 Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFE--KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 414 SF D+GL+ +L + E +P+++Q + I P +G ++ A++G+GKT ++ + Sbjct: 127 SFVDLGLEPRVLLALQEAVPEVVQPTSVQSKTIPPLLRGRHLLCAAETGSGKTLSYLLPL 186 Query: 415 LQQLDYG-------LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 Q+L G + LVL P+RELA+Q++ V ++LG YLG++V GG Sbjct: 187 FQRLLRGSDLDSRSFTAPRGLVLVPSRELAEQVQAVAQSLGGYLGLQVIELGGG 240
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 62.8 bits (151), Expect = 7e-10 Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%) Frame = +1 Query: 256 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD-- 429 GL + L I G+E P++IQ + I G DVI A++G+GKT F +L+ + Sbjct: 409 GLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQ 468 Query: 430 ---YGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 G A+V++PTRELA QI K + L ++ CVGG+S+ E Sbjct: 469 RPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISE 518
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 62.4 bits (150), Expect = 9e-10 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 5/111 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 E+FD+ G ++ + A GF P+AIQ +G G DV+ A++G+GKT T+C + Sbjct: 134 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSI 193 Query: 418 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 ++ + LVLAPTRELA QI++ M+ G ++ + CV G Sbjct: 194 VHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIR-NTCVYG 243
>DBP10_YEAST (Q12389) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) (DEAD box| protein 10) Length = 995 Score = 62.4 bits (150), Expect = 9e-10 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 7/147 (4%) Frame = +1 Query: 151 DAKNYDSKMQELLSQGETEEFFTSYD-----EVHESFDDMGLQENLLRGIYAYGFEKPSA 315 D N K Q + + E+F++ + SF GL + +L I GF +P+ Sbjct: 103 DENNASGKTQTGDDEDDVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTP 162 Query: 316 IQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVECQALVLAPTRELAQQ 489 IQ++ I + D++ A++G+GKTA F ++++L G + +A++L+P+RELA Q Sbjct: 163 IQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQ 222 Query: 490 IEKVMRALGDYLGVKVHACVGGTSVRE 570 V + ++ GG S+ E Sbjct: 223 TFNVFKDFARGTELRSVLLTGGDSLEE 249
>DDX56_MOUSE (Q9D0R4) Probable ATP-dependent RNA helicase DDX56 (EC 3.6.1.-)| (DEAD box protein 56) (ATP-dependent 61 kDa nucleolar RNA helicase) Length = 546 Score = 62.0 bits (149), Expect = 1e-09 Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 7/106 (6%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 D+ F+ MGL LL+ + G+ +P+ IQ++ I +G D++ +A++G+GKTA + Sbjct: 3 DQEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA 62 Query: 406 SGILQQLDY----GLVECQA---LVLAPTRELAQQIEKVMRALGDY 522 +LQ L + G V QA LVL PT+ELA+Q + +++ L Y Sbjct: 63 IPMLQSLLHKKATGPVMEQAVRGLVLVPTKELARQAQAMIQQLAAY 108
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 62.0 bits (149), Expect = 1e-09 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT-----ATFCS 408 F D+ L +L + GF+ + IQ + G DV QAQ+GTGKT ATF Sbjct: 11 FSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHH 70 Query: 409 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 + QQ D G + +AL+LAPTRELA QI L G+K GG Sbjct: 71 LLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGG 119
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 61.6 bits (148), Expect = 1e-09 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 4/96 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 + F ++GL E L+GI GFE + IQQR I P G DV+ A++G+GKT F + Sbjct: 128 KKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 187 Query: 418 QQLDYGLVECQ----ALVLAPTRELAQQIEKVMRAL 513 + L + + +V++PTRELA QI V R L Sbjct: 188 EMLSALRFKPRNGTGVIVVSPTRELALQIFGVAREL 223
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 61.6 bits (148), Expect = 1e-09 Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 EV SF D+ L + ++ I GF + +A+Q R I P G DV+ A++G+GKT F Sbjct: 31 EVEGSFSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLI 90 Query: 409 GILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 ++ L + + +V+ PTRELA QI V R L ++ +GG + R+ Sbjct: 91 PAIEMLHSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQ 148
>DBP8_ASHGO (Q756G5) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 61.6 bits (148), Expect = 1e-09 Identities = 35/110 (31%), Positives = 57/110 (51%) Frame = +1 Query: 235 HESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 414 + +F D+G+ + L + + +P+ IQ+ I G D I A++G+GKT F + + Sbjct: 5 NSTFKDLGVAKWLAEALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAFAAPM 64 Query: 415 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 L + +VL PTRELA QI + ALG + ++V VGG + Sbjct: 65 LTKWSADPCGMFGIVLTPTRELAMQIAEQFTALGSVMNIRVALVVGGEDI 114
>DDX56_HUMAN (Q9NY93) Probable ATP-dependent RNA helicase DDX56 (EC 3.6.1.-)| (DEAD box protein 56) (ATP-dependent 61 kDa nucleolar RNA helicase) (DEAD-box protein 21) Length = 547 Score = 61.6 bits (148), Expect = 1e-09 Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 7/100 (7%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+ MGL LL+ + G+ +P+ IQ++ I +G D++ +A++G+GKTA + +LQ Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68 Query: 424 LDY----GLVECQA---LVLAPTRELAQQIEKVMRALGDY 522 L + G V QA LVL PT+ELA+Q + +++ L Y Sbjct: 69 LLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATY 108
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 61.6 bits (148), Expect = 1e-09 Identities = 32/106 (30%), Positives = 63/106 (59%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F + + ++LR + G+ +P+ +QQ I + D++ ++Q+G+GKTA+F + + Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63 Query: 424 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 561 ++ + QAL+L PTRELA Q+++ + +G + +K A G +S Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSS 109
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 61.6 bits (148), Expect = 1e-09 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 8/119 (6%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 + + GL +L I + GFEKP+ IQ + + G DVI A++G+GKT F +L Sbjct: 561 QKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPML 620 Query: 418 QQL--------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + D G + AL++ PTREL QI ++ L ++V A GG ++++ Sbjct: 621 RHVKDQDPVTGDDGAI---ALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKD 676
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 61.2 bits (147), Expect = 2e-09 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 417 +FD+ G E +L+ + GFEKP+AIQ +G G D+I A +G+GKT ++C GI+ Sbjct: 115 TFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIV 174 Query: 418 QQLDYGLVE----CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 L+ LVLAPTRELA QI+K G ++ + CV G Sbjct: 175 HINAQPLLSPGDGPVVLVLAPTRELAVQIQKECSKFGRSSRIR-NTCVYG 223
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 61.2 bits (147), Expect = 2e-09 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 8/115 (6%) Frame = +1 Query: 250 DMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL- 426 + + +L I G+++PS IQ++ I + D+I A++G+GKTA F +L + Sbjct: 319 ESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIG 378 Query: 427 -------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 D + AL++APTRELAQQIE R LG K + VGG SV E Sbjct: 379 HLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEE 433
>MAK5_SCHPO (O74393) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 648 Score = 61.2 bits (147), Expect = 2e-09 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 2/150 (1%) Frame = +1 Query: 127 MAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEK 306 M GS+ +KNY+ S E E+ S+ ++ L +L + GF K Sbjct: 90 MTSLGSKVTSKNYNE-----FSTLEEEDEHNSHGVDVSAWAHFSLSPEMLGSLSKAGFSK 144 Query: 307 PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVECQALVLAPTREL 480 P IQ I G D+I +A +G+GKT F IL+ + QALV+APTREL Sbjct: 145 PMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTREL 204 Query: 481 AQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 A QI + + ++V + GG +V++ Sbjct: 205 AHQICQHFELIKPSPNIRVMSITGGLAVQK 234
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 61.2 bits (147), Expect = 2e-09 Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 4/139 (2%) Frame = +1 Query: 166 DSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC 345 +S+ +E++ + + E +V SF + L + +R I GF K + +Q R I P Sbjct: 10 ESEKEEVVVKADVES-----SDVDHSFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLM 64 Query: 346 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRAL 513 G DV+ A++G+GKT F ++ L + + +++ PTRELA QI V+R L Sbjct: 65 AGRDVLGAAKTGSGKTLAFLLPTIELLHSLKFKPRNGTGVIIITPTRELALQIFGVVREL 124 Query: 514 GDYLGVKVHACVGGTSVRE 570 ++ +GG + R+ Sbjct: 125 MEFHSQTFGIVIGGANRRQ 143
>DBP10_ASHGO (Q757U8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 960 Score = 61.2 bits (147), Expect = 2e-09 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 23/201 (11%) Frame = +1 Query: 37 ESEXLISDSPQR-----DPSGDPRHLLPDASAMAGMAPEGSQFDAKNYDSKMQEL-LSQG 198 +S+ +SDS + S D + P S A A +G++ A D+ L LS G Sbjct: 33 DSDDSVSDSDNEVQDIIEFSDDEKQNAPQVSKTAKGA-KGAKVAAPRSDAAFPSLELSDG 91 Query: 199 E---------TEEFFTSYDEVHES------FDDMGLQENLLRGIYAYGFEKPSAIQQRGI 333 E + +F + ++ S F GL + +L I GF +P+ IQ++ I Sbjct: 92 EDADNGDKDDVDSYFNTTSQLAASKAKKGSFASFGLSKFILGNISRKGFRQPTPIQRKTI 151 Query: 334 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY--GLVECQALVLAPTRELAQQIEKVMR 507 + D++ A++G+GKTA F ++++L + +A++L+P+RELA Q KV + Sbjct: 152 PLILQQRDIVGMARTGSGKTAAFVLPLIEKLKMHSAKIGARAMILSPSRELAMQTHKVFK 211 Query: 508 ALGDYLGVKVHACVGGTSVRE 570 ++ GG + + Sbjct: 212 EFAKGSNLRSVLLTGGDGLED 232
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 60.8 bits (146), Expect = 3e-09 Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 10/120 (8%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 S+D+ GL + L+ + G+++P+ IQ+ I + D+I A +G+GKTA+F +L Sbjct: 368 SWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLV 427 Query: 421 QLDY--GLVECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + E + A+VLAPTRELAQQIE + + LG V + VGG S E Sbjct: 428 YIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEE 487
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 60.8 bits (146), Expect = 3e-09 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 10/120 (8%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 S+++ GL + LL + G+++P+ IQ+ I + D+I A +G+GKTA+F +L Sbjct: 365 SWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLV 424 Query: 421 QLDY--GLVECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 + + E + A+VLAPTRELAQQIE R LG V + VGG S E Sbjct: 425 YISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEE 484
>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 932 Score = 60.5 bits (145), Expect = 3e-09 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 420 SF G + LL I GF++P+ IQ++ I + DV+ A++G+GKTA F +++ Sbjct: 98 SFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVE 157 Query: 421 QL--DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 +L V +A++L+P+RELA Q K ++ ++ +GG S+ E Sbjct: 158 KLKSHSPRVGVRAIILSPSRELASQTFKQVKEFSKGTDLRSIVLIGGDSLEE 209
>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)| Length = 578 Score = 60.5 bits (145), Expect = 3e-09 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%) Frame = +1 Query: 139 GSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAI 318 G + D+ + D++ + L++ S F ++ L + ++ I GF K + I Sbjct: 74 GDKEDSDDKDAEAGDELTKTNDSLIAPSIATNATDFSELNLSDKTMKAIAEMGFTKMTEI 133 Query: 319 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQ----ALVLAPTRELAQ 486 Q+RGI P G DV+ A++G+GKT F ++ L + + A+V+ PTRELA Sbjct: 134 QRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFKPRNGTGAIVVTPTRELAL 193 Query: 487 QIEKVMRALGDYLGVKVHACVGGTSVR 567 QI V R L +GG + R Sbjct: 194 QIFGVARELMKNHSQTYGVVIGGANRR 220
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 60.5 bits (145), Expect = 3e-09 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F ++GL E ++GI GFE + +Q+R I P G DV+ A++G+GKT +F ++ Sbjct: 121 FTELGLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEM 180 Query: 424 LDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 L + + A++++PTRELA QI +R L + +GG + R Sbjct: 181 LSALRFKPRNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVIGGANRR 232
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 60.1 bits (144), Expect = 4e-09 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F+ L LL+ + G+ +P+AIQ I + DV+ A +GTGKTA F LQ Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQH 65 Query: 424 -LDYGLVE---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 561 LDY + + LVL PTRELA Q+ + L + + + GG + Sbjct: 66 LLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVA 115
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 60.1 bits (144), Expect = 4e-09 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 4/111 (3%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F D+ + E L+G+ F K + IQ+ I KG DV+ A++G+GKT F ++++ Sbjct: 43 FQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEK 102 Query: 424 LD----YGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 564 L + AL+++PTRELA QI +V+ +G + +GG V Sbjct: 103 LYREKWTDMDGLGALIISPTRELAMQIYEVLSKIGKHTTFSAGLVIGGKDV 153
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 60.1 bits (144), Expect = 4e-09 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 7/126 (5%) Frame = +1 Query: 199 ETEEFFTSYD--EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 372 E+E T +D + +FD+ G + +L+ + A GF+KP++IQ +G G D++ A Sbjct: 95 ESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIA 154 Query: 373 QSGTGKTATFC-SGILQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKV 537 +G+GKT ++C GI+ L+ LVLAPTRELA QI+K G ++ Sbjct: 155 ATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSSRIR- 213 Query: 538 HACVGG 555 + CV G Sbjct: 214 NTCVYG 219
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 60.1 bits (144), Expect = 4e-09 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 5/111 (4%) Frame = +1 Query: 238 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 417 E+FD+ G ++ + A GF P+AIQ +G G DV+ A++G+GKT T+C + Sbjct: 132 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 191 Query: 418 QQLDYGLVECQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 555 ++ + L+LAPTRELA QI++ + G ++ + CV G Sbjct: 192 VHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIR-NTCVYG 241
>DBP9_GIBZE (Q4IJ56) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 615 Score = 60.1 bits (144), Expect = 4e-09 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%) Frame = +1 Query: 229 EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 408 E SF D+GL LL+ I F KP+ +Q++ I G DV+ +A G+GKTA + Sbjct: 37 EEETSFVDLGLDPRLLQAIAQQKFAKPTLVQRKAIPLALNGQDVLAKADCGSGKTAAYVL 96 Query: 409 GILQQL-----DYGLVECQALVLAPTRELAQQIEKVMRALGDY 522 +L + AL+L PTRELA Q+ K + + Sbjct: 97 PLLSSILKRKATDSTAFTTALILVPTRELADQVSKAIEQFASF 139
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 59.7 bits (143), Expect = 6e-09 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 7/116 (6%) Frame = +1 Query: 244 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 423 F D+ L E G+ A FE + +Q+ I KG D++ A++G+GKT F +L++ Sbjct: 59 FSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEK 118 Query: 424 L------DY-GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 570 L +Y GL AL+++PTRELA QI +V+R +G +GG S++E Sbjct: 119 LYRARWTEYDGL---GALIISPTRELAVQIFEVLRKIGRNHSFSAGLVIGGKSLKE 171
>DDX28_HUMAN (Q9NUL7) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)| (Mitochondrial DEAD box protein 28) Length = 540 Score = 59.7 bits (143), Expect = 6e-09 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 9/118 (7%) Frame = +1 Query: 241 SFDDMGLQENLLRGIYAYGFE--KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 414 SF D+GL+ +L + E +P+ +Q I +G V+ A++G+GKT ++ + Sbjct: 127 SFADLGLEPRVLHALQEAAPEVVQPTTVQSSTIPSLLRGRHVVCAAETGSGKTLSYLLPL 186 Query: 415 LQQL-------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 567 LQ+L + + LVL P+RELAQQ+ V + LG LG+ V GG +R Sbjct: 187 LQRLLGQPSLDSLPIPAPRGLVLVPSRELAQQVRAVAQPLGRSLGLLVRDLEGGHGMR 244
>DBP9_ASPOR (Q2UFL0) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 605 Score = 59.7 bits (143), Expect = 6e-09 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%) Frame = +1 Query: 226 DEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 405 +E F+ + L L + + F KP+ +Q + I +G D++ +A++G+GKTA + Sbjct: 23 EEDDADFESLNLDPRLRQALIKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYV 82 Query: 406 SGILQQL------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHA 543 ILQ + D L+L PTRELA+Q++ V+ + G V + Sbjct: 83 LPILQTILQKKATDPSFKATTGLILVPTRELAEQVQNVVTTFAAFCGKDVRS 134 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.134 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,433,945 Number of Sequences: 219361 Number of extensions: 1862212 Number of successful extensions: 6555 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 5950 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6224 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
