ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470787.1| Oryza sativa (japonica cultivar-group), mRNA 186 5e-44
2ref|XM_470786.1| Oryza sativa (japonica cultivar-group), mRNA 186 5e-44
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 186 5e-44
4gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom... 186 5e-44
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
6gb|AY107563.1| Zea mays PCO093543 mRNA sequence 96 2e-16
7ref|XM_470794.1| Oryza sativa (japonica cultivar-group), mRNA 74 6e-10
8dbj|AK063170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
9ref|XM_470792.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
10gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 46 0.13
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.13
12ref|XM_877373.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.50
13ref|XM_877327.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.50
14ref|XM_877276.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.50
15ref|XM_877233.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.50
16ref|XM_865861.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.50
17ref|XM_591612.2| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.50
18ref|XM_470796.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
19gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 42 2.0
20ref|XM_573691.1| PREDICTED: Rattus norvegicus similar to myozeni... 42 2.0
21ref|NM_190381.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
22gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.8
23ref|NM_001032932.1| Macaca mulatta aryl-hydrocarbon interacting ... 40 7.8
24ref|XM_988711.1| PREDICTED: Mus musculus zinc finger protein 167... 40 7.8
25gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosom... 40 7.8
26gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of... 40 7.8
27gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 7.8
28gb|BC042569.1| Mus musculus zinc finger protein 167, mRNA (cDNA ... 40 7.8
29gb|AF296414.1|AF296414 Papio cynocephalus aryl-hydrocarbon inter... 40 7.8
30gb|AF296411.1|AF296411 Macaca mulatta aryl-hydrocarbon interacti... 40 7.8
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
32dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
33ref|XM_220206.3| PREDICTED: Rattus norvegicus kringle containing... 40 7.8
34dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.8
35emb|AL160471.5|CNS01RH4 Human chromosome 14 DNA sequence BAC R-3... 40 7.8
36gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, co... 40 7.8
37emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chro... 40 7.8 
>ref|XM_470787.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1481

 Score =  186 bits (94), Expect = 5e-44
 Identities = 145/162 (89%)
 Strand = Plus / Plus

                                                                        
Query: 291  gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 350
            ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||
Sbjct: 941  gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 1000

                                                                        
Query: 351  ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 410
            ||||||||| ||||||||  ||||||||||||| |||||| || ||||||||| || |||
Sbjct: 1001 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 1060

                                                      
Query: 411  cccatcggcggctccatccgcagggtcggaaacttcagcggc 452
            |||||||||| | ||||||||| |||||  ||||||||||||
Sbjct: 1061 cccatcggcgcccccatccgcaaggtcgccaacttcagcggc 1102



 Score =  119 bits (60), Expect = 1e-23
 Identities = 101/112 (90%), Gaps = 2/112 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  catcctggnacgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaag 71
           |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 667 catcctgg-acgacgag-atcaacgaggccatcgtccgcccgctcgtccacggcgccaag 724

                                                               
Query: 72  ctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
           || |||||| ||||||| |||   |||||| |||||||||||||||||||||
Sbjct: 725 ctccacgccgtcgtcgacgccgagcacagctccaccgtcctcgacctcccct 776
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>ref|XM_470786.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 857

 Score =  186 bits (94), Expect = 5e-44
 Identities = 145/162 (89%)
 Strand = Plus / Plus

                                                                       
Query: 291 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 350
           ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||
Sbjct: 284 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 343

                                                                       
Query: 351 ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 410
           ||||||||| ||||||||  ||||||||||||| |||||| || ||||||||| || |||
Sbjct: 344 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 403

                                                     
Query: 411 cccatcggcggctccatccgcagggtcggaaacttcagcggc 452
           |||||||||| | ||||||||| |||||  ||||||||||||
Sbjct: 404 cccatcggcgcccccatccgcaaggtcgccaacttcagcggc 445
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  186 bits (94), Expect = 5e-44
 Identities = 145/162 (89%)
 Strand = Plus / Minus

                                                                            
Query: 291      gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 350
                ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||
Sbjct: 15369512 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 15369453

                                                                            
Query: 351      ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 410
                ||||||||| ||||||||  ||||||||||||| |||||| || ||||||||| || |||
Sbjct: 15369452 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 15369393

                                                          
Query: 411      cccatcggcggctccatccgcagggtcggaaacttcagcggc 452
                |||||||||| | ||||||||| |||||  ||||||||||||
Sbjct: 15369392 cccatcggcgcccccatccgcaaggtcgccaacttcagcggc 15369351



 Score =  119 bits (60), Expect = 1e-23
 Identities = 101/112 (90%), Gaps = 2/112 (1%)
 Strand = Plus / Minus

                                                                            
Query: 12       catcctggnacgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaag 71
                |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 15369869 catcctgg-acgacgag-atcaacgaggccatcgtccgcccgctcgtccacggcgccaag 15369812

                                                                    
Query: 72       ctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
                || |||||| ||||||| |||   |||||| |||||||||||||||||||||
Sbjct: 15369811 ctccacgccgtcgtcgacgccgagcacagctccaccgtcctcgacctcccct 15369760



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                            
Query: 30       atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 89
                |||||||| |||||||||   ||||||   || ||||| ||||||||||||||| |||| 
Sbjct: 15409790 atcaacgatgccatcgtcaagccgctcacccaaggcgtgaagctgcacgccatcatcgac 15409731

                                                     
Query: 90       gcctgccacagcgccaccgtcctcgacctcccctacc 126
                 |||||||||||| |||| | ||||||||||||||||
Sbjct: 15409730 acctgccacagcggcaccatgctcgacctcccctacc 15409694



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 86/103 (83%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                            
Query: 21       acgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgcc 80
                |||||||| ||||||||| |||||||||| || |||||   |||||  ||||| ||||||
Sbjct: 15402352 acgacgag-atcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctccacgcc 15402294

                                                           
Query: 81       atcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
                ||||| ||  | |||||||||| |||| |||| ||||||||||
Sbjct: 15402293 atcgtggacacgtgccacagcggcaccatcctggacctcccct 15402251



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 283      cgatcggcgccatgacgcacagcttcatcagagcggtggagt 324
                ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 15401998 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 15401957



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 291      gccatgacgcacagcttcatcagagcggtggag 323
                ||||||||| ||||||||||||  |||||||||
Sbjct: 15423436 gccatgacgtacagcttcatcaaggcggtggag 15423404
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>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
              sequence
          Length = 164705

 Score =  186 bits (94), Expect = 5e-44
 Identities = 145/162 (89%)
 Strand = Plus / Plus

                                                                          
Query: 291    gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 350
              ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||
Sbjct: 132014 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 132073

                                                                          
Query: 351    ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 410
              ||||||||| ||||||||  ||||||||||||| |||||| || ||||||||| || |||
Sbjct: 132074 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 132133

                                                        
Query: 411    cccatcggcggctccatccgcagggtcggaaacttcagcggc 452
              |||||||||| | ||||||||| |||||  ||||||||||||
Sbjct: 132134 cccatcggcgcccccatccgcaaggtcgccaacttcagcggc 132175



 Score =  119 bits (60), Expect = 1e-23
 Identities = 101/112 (90%), Gaps = 2/112 (1%)
 Strand = Plus / Plus

                                                                          
Query: 12     catcctggnacgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaag 71
              |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 131657 catcctgg-acgacgag-atcaacgaggccatcgtccgcccgctcgtccacggcgccaag 131714

                                                                  
Query: 72     ctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
              || |||||| ||||||| |||   |||||| |||||||||||||||||||||
Sbjct: 131715 ctccacgccgtcgtcgacgccgagcacagctccaccgtcctcgacctcccct 131766



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                         
Query: 30    atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 89
             |||||||| |||||||||   ||||||   || ||||| ||||||||||||||| |||| 
Sbjct: 91736 atcaacgatgccatcgtcaagccgctcacccaaggcgtgaagctgcacgccatcatcgac 91795

                                                  
Query: 90    gcctgccacagcgccaccgtcctcgacctcccctacc 126
              |||||||||||| |||| | ||||||||||||||||
Sbjct: 91796 acctgccacagcggcaccatgctcgacctcccctacc 91832



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 86/103 (83%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                         
Query: 21    acgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgcc 80
             |||||||| ||||||||| |||||||||| || |||||   |||||  ||||| ||||||
Sbjct: 99174 acgacgag-atcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctccacgcc 99232

                                                        
Query: 81    atcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
             ||||| ||  | |||||||||| |||| |||| ||||||||||
Sbjct: 99233 atcgtggacacgtgccacagcggcaccatcctggacctcccct 99275



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 283   cgatcggcgccatgacgcacagcttcatcagagcggtggagt 324
             ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 99528 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 99569



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 291   gccatgacgcacagcttcatcagagcggtggag 323
             ||||||||| ||||||||||||  |||||||||
Sbjct: 78090 gccatgacgtacagcttcatcaaggcggtggag 78122
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  186 bits (94), Expect = 5e-44
 Identities = 145/162 (89%)
 Strand = Plus / Minus

                                                                            
Query: 291      gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 350
                ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||
Sbjct: 15364046 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 15363987

                                                                            
Query: 351      ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 410
                ||||||||| ||||||||  ||||||||||||| |||||| || ||||||||| || |||
Sbjct: 15363986 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 15363927

                                                          
Query: 411      cccatcggcggctccatccgcagggtcggaaacttcagcggc 452
                |||||||||| | ||||||||| |||||  ||||||||||||
Sbjct: 15363926 cccatcggcgcccccatccgcaaggtcgccaacttcagcggc 15363885



 Score =  119 bits (60), Expect = 1e-23
 Identities = 101/112 (90%), Gaps = 2/112 (1%)
 Strand = Plus / Minus

                                                                            
Query: 12       catcctggnacgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaag 71
                |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 15364403 catcctgg-acgacgag-atcaacgaggccatcgtccgcccgctcgtccacggcgccaag 15364346

                                                                    
Query: 72       ctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
                || |||||| ||||||| |||   |||||| |||||||||||||||||||||
Sbjct: 15364345 ctccacgccgtcgtcgacgccgagcacagctccaccgtcctcgacctcccct 15364294



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                            
Query: 30       atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 89
                |||||||| |||||||||   ||||||   || ||||| ||||||||||||||| |||| 
Sbjct: 15404324 atcaacgatgccatcgtcaagccgctcacccaaggcgtgaagctgcacgccatcatcgac 15404265

                                                     
Query: 90       gcctgccacagcgccaccgtcctcgacctcccctacc 126
                 |||||||||||| |||| | ||||||||||||||||
Sbjct: 15404264 acctgccacagcggcaccatgctcgacctcccctacc 15404228



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 86/103 (83%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                            
Query: 21       acgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgcc 80
                |||||||| ||||||||| |||||||||| || |||||   |||||  ||||| ||||||
Sbjct: 15396886 acgacgag-atcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctccacgcc 15396828

                                                           
Query: 81       atcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
                ||||| ||  | |||||||||| |||| |||| ||||||||||
Sbjct: 15396827 atcgtggacacgtgccacagcggcaccatcctggacctcccct 15396785



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 283      cgatcggcgccatgacgcacagcttcatcagagcggtggagt 324
                ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 15396532 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 15396491



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 291      gccatgacgcacagcttcatcagagcggtggag 323
                ||||||||| ||||||||||||  |||||||||
Sbjct: 15417970 gccatgacgtacagcttcatcaaggcggtggag 15417938
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>gb|AY107563.1| Zea mays PCO093543 mRNA sequence
          Length = 995

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 98/112 (87%), Gaps = 2/112 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  catcctggnacgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaag 71
           |||||||| |||||||| ||||||||| |||||||||| ||||| |||| ||||| ||||
Sbjct: 212 catcctgg-acgacgag-atcaacgagaccatcgtccggccgctggtgcccggcgccaag 269

                                                               
Query: 72  ctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
           || |||||| ||||||| || ||||||||||   ||||||||||||||||||
Sbjct: 270 ctccacgccgtcgtcgacgcgtgccacagcgattccgtcctcgacctcccct 321



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 159/197 (80%), Gaps = 3/197 (1%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgggcgcctgcaagggcaccagcggaggccaggccgtgctcatcagtggcagcagcaacg 243
           |||||| |||||||||||| ||||| |||||||| ||||| ||||| |||  |||| |||
Sbjct: 379 cgggcgtctgcaagggcacgagcggcggccaggcggtgcttatcagcggctacagcgacg 438

                                                                       
Query: 244 ggaagagcaacatgagcgtgctgcctgagccctacgccacgatcggcgccatgacgcaca 303
           | || |||||  | ||| ||  ||| ||| ||| |||  || | || |||||||| ||||
Sbjct: 439 gcaaaagcaagttcagcatgacgccggaggcctgcgcggcggtgggggccatgacccaca 498

                                                                       
Query: 304 gcttcatcagagcggtggagtgcgagccgc---gcaccacctacggccgcctgctcacct 360
           |||||||||  |||||||| |||||||| |   |   |||||||||||||||||||||||
Sbjct: 499 gcttcatcaaggcggtggaatgcgagccccagggggtcacctacggccgcctgctcacct 558

                            
Query: 361 ccatgagggccatcatg 377
           ||||||  |||||||||
Sbjct: 559 ccatgaaagccatcatg 575



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 428 ccgcagggtcggaaacttcagcggcgtggaggaacct 464
           ||||| |||||  ||||||||||||||| ||||||||
Sbjct: 626 ccgcaaggtcgtcaacttcagcggcgtgcaggaacct 662
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>ref|XM_470794.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 30  atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 89
           |||||||| |||||||||   ||||||   || ||||| ||||||||||||||| |||| 
Sbjct: 385 atcaacgatgccatcgtcaagccgctcacccaaggcgtgaagctgcacgccatcatcgac 444

                                                
Query: 90  gcctgccacagcgccaccgtcctcgacctcccctacc 126
            |||||||||||| |||| | ||||||||||||||||
Sbjct: 445 acctgccacagcggcaccatgctcgacctcccctacc 481
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>dbj|AK063170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-G09, full
           insert sequence
          Length = 1347

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 30  atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 89
           |||||||| |||||||||   ||||||   || ||||| ||||||||||||||| |||| 
Sbjct: 419 atcaacgatgccatcgtcaagccgctcacccaaggcgtgaagctgcacgccatcatcgac 478

                                                
Query: 90  gcctgccacagcgccaccgtcctcgacctcccctacc 126
            |||||||||||| |||| | ||||||||||||||||
Sbjct: 479 acctgccacagcggcaccatgctcgacctcccctacc 515
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>ref|XM_470792.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 86/103 (83%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 21  acgacgagnatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgcc 80
           |||||||| ||||||||| |||||||||| || |||||   |||||  ||||| ||||||
Sbjct: 680 acgacgag-atcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctccacgcc 738

                                                      
Query: 81  atcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 123
           ||||| ||  | |||||||||| |||| |||| ||||||||||
Sbjct: 739 atcgtggacacgtgccacagcggcaccatcctggacctcccct 781



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 283 cgatcggcgccatgacgcacagcttcatcagagcggtggagt 324
           ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 956 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 997
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 479     gtacaagttcgacatcgagcgcg 501
               |||||||||||||||||||||||
Sbjct: 1958019 gtacaagttcgacatcgagcgcg 1957997
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 330     ccgcgcaccacctacggccgcctgctc 356
               ||||||||||| |||||||||||||||
Sbjct: 5654417 ccgcgcaccacgtacggccgcctgctc 5654443
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>ref|XM_877373.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 6 (LOC513856), mRNA
          Length = 4896

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  gccaggccgtgctcatcagtgg 232
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
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>ref|XM_877327.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 5 (LOC513856), mRNA
          Length = 4848

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  gccaggccgtgctcatcagtgg 232
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
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>ref|XM_877276.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 4 (LOC513856), mRNA
          Length = 4923

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  gccaggccgtgctcatcagtgg 232
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
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>ref|XM_877233.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 3 (LOC513856), mRNA
          Length = 2803

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  gccaggccgtgctcatcagtgg 232
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
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>ref|XM_865861.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 2 (LOC513856), mRNA
          Length = 4911

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  gccaggccgtgctcatcagtgg 232
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
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>ref|XM_591612.2| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 1 (LOC513856), mRNA
          Length = 5019

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  gccaggccgtgctcatcagtgg 232
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
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>ref|XM_470796.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 291 gccatgacgcacagcttcatcagagcggtggag 323
           ||||||||| ||||||||||||  |||||||||
Sbjct: 883 gccatgacgtacagcttcatcaaggcggtggag 915
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>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   ggaggtggagggatgagcgcc 177
             |||||||||||||||||||||
Sbjct: 75813 ggaggtggagggatgagcgcc 75833
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>ref|XM_573691.1| PREDICTED: Rattus norvegicus similar to myozenin 1 (LOC498440),
           mRNA
          Length = 1394

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 193 gcaagggcaccagcggaggccaggc 217
           ||||||||| |||||||||||||||
Sbjct: 560 gcaagggcagcagcggaggccaggc 584
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>ref|NM_190381.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2376

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   ctgcacgccatcgtcgatgc 91
            ||||||||||||||||||||
Sbjct: 1738 ctgcacgccatcgtcgatgc 1719
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 325     gcgagccgcgcaccacctacggccgcctgctc 356
               ||||||||||| |||||| |||| ||||||||
Sbjct: 4749076 gcgagccgcgcgccaccttcggctgcctgctc 4749107
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>ref|NM_001032932.1| Macaca mulatta aryl-hydrocarbon interacting protein-like 1 (AIPL1),
           mRNA
          Length = 1179

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 cctgctcacctccatgaggg 369
           ||||||||||||||||||||
Sbjct: 222 cctgctcacctccatgaggg 241
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>ref|XM_988711.1| PREDICTED: Mus musculus zinc finger protein 167 (Zfp167), mRNA
          Length = 2400

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 gaggccaggccgtgctcatc 227
           ||||||||||||||||||||
Sbjct: 713 gaggccaggccgtgctcatc 694
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>gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosome 9, complete sequence
          Length = 175440

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   gaggccaggccgtgctcatc 227
             ||||||||||||||||||||
Sbjct: 64334 gaggccaggccgtgctcatc 64353
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>gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of the complete genome
          Length = 10886

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 68   caagctgcacgccatcgtcgatgc 91
            ||||||||||| ||||||||||||
Sbjct: 6056 caagctgcacgacatcgtcgatgc 6033
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 337     ccacctacggccgcctgctcacctccat 364
               |||||||||||||||||| |||| ||||
Sbjct: 3642444 ccacctacggccgcctgcgcaccgccat 3642471
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>gb|BC042569.1| Mus musculus zinc finger protein 167, mRNA (cDNA clone
            IMAGE:3994925), with apparent retained intron
          Length = 3973

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  gaggccaggccgtgctcatc 227
            ||||||||||||||||||||
Sbjct: 1367 gaggccaggccgtgctcatc 1348
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>gb|AF296414.1|AF296414 Papio cynocephalus aryl-hydrocarbon interacting protein-like 1
           (Aipl1) mRNA, complete cds
          Length = 1119

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 cctgctcacctccatgaggg 369
           ||||||||||||||||||||
Sbjct: 222 cctgctcacctccatgaggg 241
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>gb|AF296411.1|AF296411 Macaca mulatta aryl-hydrocarbon interacting protein-like 1 (Aipl1)
           mRNA, complete cds
          Length = 1179

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 cctgctcacctccatgaggg 369
           ||||||||||||||||||||
Sbjct: 222 cctgctcacctccatgaggg 241
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 72       ctgcacgccatcgtcgatgc 91
                ||||||||||||||||||||
Sbjct: 35155167 ctgcacgccatcgtcgatgc 35155148
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>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D02
          Length = 183692

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ctgcacgccatcgtcgatgc 91
             ||||||||||||||||||||
Sbjct: 34251 ctgcacgccatcgtcgatgc 34232
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>ref|XM_220206.3| PREDICTED: Rattus norvegicus kringle containing transmembrane
           protein 2 (predicted) (Kremen2_predicted), mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 ggcagcagcaacgggaagag 250
           ||||||||||||||||||||
Sbjct: 53  ggcagcagcaacgggaagag 34
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 479     gtacaagttcgacatcgagcgcga 502
               |||||||||||||||||| |||||
Sbjct: 5269208 gtacaagttcgacatcgaccgcga 5269231
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>emb|AL160471.5|CNS01RH4 Human chromosome 14 DNA sequence BAC R-304L20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193559

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ctggaggtggagggatgagc 174
              ||||||||||||||||||||
Sbjct: 177719 ctggaggtggagggatgagc 177738
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>gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, complete sequence
          Length = 181505

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    gtgctcatcagtggcagcag 238
              ||||||||||||||||||||
Sbjct: 116162 gtgctcatcagtggcagcag 116143
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>emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chromosome 2, complete
             sequence
          Length = 198627

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   gcaccgtgtccaagcagacc 149
             ||||||||||||||||||||
Sbjct: 55078 gcaccgtgtccaagcagacc 55097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,917,578
Number of Sequences: 3902068
Number of extensions: 3917578
Number of successful extensions: 70672
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70057
Number of HSP's gapped (non-prelim): 615
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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