>gb|DQ128063.1| Triticum monococcum clone tm3-1, genomic sequence
          Length = 499

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 379 gaaggagacctcatggatgaagagtacggtagagagtctggcgcctagagg 429
           ||||| || |||||||||||||||| || ||| ||||| | ||||||||||
Sbjct: 295 gaaggtgatctcatggatgaagagttcgatagcgagtccgacgcctagagg 345

>gb|DQ128062.1| Triticum monococcum clone p8-3, genomic sequence
          Length = 474

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 379 gaaggagacctcatggatgaagagtacggtagagagtctggcgcctagagg 429
           ||||| || |||||||||||||||| || ||| ||||| | ||||||||||
Sbjct: 295 gaaggtgatctcatggatgaagagttcgatagcgagtccgacgcctagagg 345

>gb|DQ128035.1| Triticum aestivum clone A3-4 Ty3/gypsy-like retrotransposon,
           partial sequence
          Length = 486

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 379 gaaggagacctcatggatgaagagtacggtagagagtctggcgcctagagg 429
           ||||| || |||||||||||||| || | ||| ||||||| ||||||||||
Sbjct: 283 gaaggcgatctcatggatgaagaatatgatagcgagtctgacgcctagagg 333

>ref|XM_215108.3| PREDICTED: Rattus norvegicus polyamine oxidase (predicted)
           (Paox_predicted), mRNA
          Length = 1695

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 26  gccttcttccccgcctttggcc 47
           ||||||||||||||||||||||
Sbjct: 99  gccttcttccccgcctttggcc 120

>gb|AY642113.1| Dicentrarchus labrax follicle stimulating hormone receptor precursor
            (fshr) mRNA, complete cds
          Length = 3134

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 258  actccacctccatcatctgca 278
            |||||||||||||||||||||
Sbjct: 1258 actccacctccatcatctgca 1278

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 331     gacgccgtcggcgacatcgcg 351
               |||||||||||||||||||||
Sbjct: 1322426 gacgccgtcggcgacatcgcg 1322406

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 326     tacaggacgccgtcggcgacatcgc 350
               |||||||||||| ||||||||||||
Sbjct: 3128870 tacaggacgccgccggcgacatcgc 3128846

>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 77      ttagcccatgtggaggcacc 96
               ||||||||||||||||||||
Sbjct: 1376560 ttagcccatgtggaggcacc 1376541

>ref|XM_758721.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0179) partial mRNA
          Length = 1095

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 tgaagagtacggtagagagt 415
           ||||||||||||||||||||
Sbjct: 521 tgaagagtacggtagagagt 540

>gb|AC005090.2| Homo sapiens BAC clone CTA-315L10 from 7, complete sequence
          Length = 116218

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     taaattagcccatgtggagg 92
              ||||||||||||||||||||
Sbjct: 112104 taaattagcccatgtggagg 112085

>emb|AL596217.6| Human DNA sequence from clone RP11-13J14 on chromosome 1 Contains a CpG
              island, complete sequence
          Length = 183774

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    gtgactccacctccatcatc 274
              ||||||||||||||||||||
Sbjct: 111044 gtgactccacctccatcatc 111025

>emb|AL008583.1|HS327J16 Human DNA sequence from clone RP3-327J16 on chromosome 22q12.3-13.2,
             complete sequence
          Length = 111746

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   ctccatcgagatcccactgc 196
             ||||||||||||||||||||
Sbjct: 49529 ctccatcgagatcccactgc 49548

>gb|AY038865.1|AY038861S05 Mus musculus protein tyrosine phosphatase receptor-like protein J
             (Ptprj) gene, intron 1
          Length = 13896

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   ttatggcatgtcacgtcact 599
             ||||||||||||||||||||
Sbjct: 12127 ttatggcatgtcacgtcact 12146

>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence
          Length = 175838

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    cattgtattatttcacttgt 482
              ||||||||||||||||||||
Sbjct: 164549 cattgtattatttcacttgt 164530

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    tcctcgatcaccagcccttc 143
              ||||||||||||||||||||
Sbjct: 303079 tcctcgatcaccagcccttc 303060

>ref|NM_058178.1| Homo sapiens neuronal pentraxin receptor (NPTXR), transcript variant
            2, mRNA
          Length = 5811

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ctccatcgagatcccactgc 196
            ||||||||||||||||||||
Sbjct: 2187 ctccatcgagatcccactgc 2168

>ref|NM_014293.2| Homo sapiens neuronal pentraxin receptor (NPTXR), transcript variant
            1, mRNA
          Length = 5814

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ctccatcgagatcccactgc 196
            ||||||||||||||||||||
Sbjct: 2190 ctccatcgagatcccactgc 2171

>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence
          Length = 172551

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   cattgtattatttcacttgt 482
             ||||||||||||||||||||
Sbjct: 83264 cattgtattatttcacttgt 83245

>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete
              sequence
          Length = 178273

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 580    ttatggcatgtcacgtcact 599
              ||||||||||||||||||||
Sbjct: 157597 ttatggcatgtcacgtcact 157578

>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    ggacgccgtcggcgacatcg 349
              ||||||||||||||||||||
Sbjct: 231467 ggacgccgtcggcgacatcg 231486

>emb|AL162057.1|HSM802588 Homo sapiens mRNA; cDNA DKFZp761N0524 (from clone DKFZp761N0524)
          Length = 4459

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ctccatcgagatcccactgc 196
           ||||||||||||||||||||
Sbjct: 831 ctccatcgagatcccactgc 812

>emb|AL161974.1|HSM802567 Homo sapiens mRNA; cDNA DKFZp761M2013 (from clone DKFZp761M2013)
          Length = 5140

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ctccatcgagatcccactgc 196
            ||||||||||||||||||||
Sbjct: 1503 ctccatcgagatcccactgc 1484


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,242,008
Number of Sequences: 3902068
Number of extensions: 4242008
Number of successful extensions: 76716
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76554
Number of HSP's gapped (non-prelim): 162
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)