ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480492.1| Oryza sativa (japonica cultivar-group), mRNA 133 5e-28
2gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nuc... 133 5e-28
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
4dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
5dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
6gb|BT018730.1| Zea mays clone EL01N0519D03.d mRNA sequence 94 5e-16
7ref|XM_473923.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
8emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 60 6e-06
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
10dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
11gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence 60 6e-06
12gb|AY111884.1| Zea mays CL19566_1 mRNA sequence 52 0.002
13gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histo... 48 0.024
14gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1),... 48 0.024
15gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.096
16gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 46 0.096
17gb|AF008943.1|AF008943 Crithidia fasciculata kinetoplast-associa... 46 0.096
18gb|BC025078.1| Mus musculus zinc finger, CCHC domain containing ... 44 0.38
19gb|AC092229.2| Drosophila melanogaster clone BACR23I04, complete... 44 0.38
20ref|XM_849267.1| PREDICTED: Canis familiaris similar to AF4/FMR2... 44 0.38
21ref|NM_057252.3| Drosophila melanogaster escargot CG3758-RA (esg... 44 0.38
22ref|NM_026479.2| Mus musculus zinc finger, CCHC domain containin... 44 0.38
23gb|AY071590.1| Drosophila melanogaster RE64266 full length cDNA 44 0.38
24dbj|AK169856.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.38
25dbj|AK010803.1| Mus musculus ES cells cDNA, RIKEN full-length en... 44 0.38
26dbj|AK020177.1| Mus musculus 12 days embryo male wolffian duct i... 44 0.38
27gb|AC092247.1|AC092247 Drosophila melanogaster, chromosome 2L, r... 44 0.38
28dbj|AK027985.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 44 0.38
29dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 44 0.38
30ref|NM_214555.1| Strongylocentrotus purpuratus late histone H1-g... 44 0.38
31gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-2... 44 0.38
32gb|BC087902.1| Mus musculus zinc finger, CCHC domain containing ... 44 0.38
33gb|BT023984.1| Zea mays clone EL01N0314H01 mRNA sequence 44 0.38
34gb|AE003647.3| Drosophila melanogaster chromosome 2L, section 56... 44 0.38
35gb|L43510.1|PEAORF Pisum sativum L. (clone na-481-5) mRNA, compl... 44 0.38
36gb|M16033.1|SUSHISHA1G Sea urchin (S.purpuratus) late histone H1... 44 0.38
37emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on ch... 44 0.38
38gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, co... 42 1.5
39gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA,... 42 1.5
40gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
41ref|XM_957859.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
42ref|XM_328536.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.9
43gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosom... 40 5.9
44ref|XR_002639.1| PREDICTED: Mus musculus similar to DEAD (Asp-Gl... 40 5.9
45gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
46ref|XM_549104.2| PREDICTED: Canis familiaris similar to bromo do... 40 5.9
47ref|XR_003676.1| PREDICTED: Mus musculus similar to DEAD (Asp-Gl... 40 5.9
48gb|AC132384.2| Mus musculus BAC clone RP23-438F16 from chromosom... 40 5.9
49ref|XM_854087.1| PREDICTED: Canis familiaris hypothetical protei... 40 5.9
50gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome... 40 5.9
51gb|AC151904.6| Mus musculus BAC clone RP23-233K6 from chromosome... 40 5.9
52emb|AJ973181.1| Sphaerechinus granularis mRNA for translation el... 40 5.9
53gb|BC030149.2| Homo sapiens cDNA clone IMAGE:4842353, partial cds 40 5.9
54ref|XM_504483.1| Yarrowia lipolytica CLIB122, YALI0E27808g predi... 40 5.9
55emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512... 40 5.9
56gb|AY309922.1| Homo sapiens BH3 interacting domain death agonist... 40 5.9
57emb|Y14236.1|SGY14236 Sphaerichinus granularis mRNA for elongati... 40 5.9
58emb|Y14235.1|SGY14235 Sphaerichinus granularis mRNA for elongati... 40 5.9
59emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.9
60emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 5.9
61emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 5.9
62gb|AC163439.3| Mus musculus chromosome 8, clone RP23-390F12, com... 40 5.9
63gb|BC047432.1| Homo sapiens cDNA clone IMAGE:5288883 40 5.9
64gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sytha... 40 5.9
65emb|CR620309.1| full-length cDNA clone CS0DL011YM05 of B cells (... 40 5.9
66gb|AC135106.8| Pan troglodytes clone rp43-48a6, complete sequence 40 5.9
67dbj|AK055641.1| Homo sapiens cDNA FLJ31079 fis, clone HSYRA2001595 40 5.9
68gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 5.9
69gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.9
70gb|AC016026.15| Homo sapiens chromosome 22 clone b461k10 map 22q... 40 5.9
71gb|AC016025.14| Homo sapiens chromosome 22 clone b342k14 map 22q... 40 5.9
72gb|AC007845.14| Homo sapiens chromosome 22 clone 678g6 map 22q11... 40 5.9
73dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
74dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
75gb|AC112788.4| Homo sapiens BAC clone RP11-1221I12 from 2, compl... 40 5.9
76gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosom... 40 5.9
77gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome... 40 5.9
78dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.9
79gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Ca... 40 5.9
80ref|XM_342141.2| PREDICTED: Rattus norvegicus DEAD (Asp-Glu-Ala-... 40 5.9
81dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
82emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.9
83dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
84gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 m... 40 5.9
85dbj|AB076892.1| Ciona intestinalis Ci-Noto9 mRNA for notochord s... 40 5.9
86gb|BC105878.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box poly... 40 5.9
87dbj|AK114059.1| Ciona intestinalis cDNA, clone:cicl025p19, full ... 40 5.9
88gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.9
89ref|NM_001037201.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box... 40 5.9
90emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 5.9
91gb|U16725.1|CRU16725 Chlamydomonas reinhardtii histone H3 (ch3-I... 40 5.9
92gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-I... 40 5.9
93gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 5.9
94emb|AL590619.9| Mouse DNA sequence from clone RP23-357B4 on chro... 40 5.9
95gb|M83207.1|DROESCARGO Drosophila melanogaster developmental esc... 40 5.9
96dbj|D87065.1| Triticum aestivum gene for histone H1, complete cd... 40 5.9
97dbj|D87064.1| Triticum aestivum gene for histone H1, complete cd... 40 5.9 
>ref|XM_480492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2090

 Score =  133 bits (67), Expect = 5e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                       
Query: 107 ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 166
           |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 163 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 222

                                                                       
Query: 167 ccaagaagcagaaggctg---------cgccggcaaaggcggtgaccgcgcccaaagagg 217
           |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 223 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 282

                                                  
Query: 218 ccgccaagaaggccaagaagcagccgccgcccaagaagg 256
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acgccaagaaggccaagaagcagccgccgcccaagaagg 321



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 263 gcagcagctctgaggaggagtcatccgagtccgaggaggagg 304
           ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 340 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 381
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>gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nucleolin (NUC) mRNA,
           complete cds
          Length = 2039

 Score =  133 bits (67), Expect = 5e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                       
Query: 107 ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 166
           |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 76  ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 135

                                                                       
Query: 167 ccaagaagcagaaggctg---------cgccggcaaaggcggtgaccgcgcccaaagagg 217
           |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 136 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 195

                                                  
Query: 218 ccgccaagaaggccaagaagcagccgccgcccaagaagg 256
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 196 acgccaagaaggccaagaagcagccgccgcccaagaagg 234



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 263 gcagcagctctgaggaggagtcatccgagtccgaggaggagg 304
           ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 253 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 294
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  133 bits (67), Expect = 5e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Minus

                                                                           
Query: 107     ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 166
               |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 5420169 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 5420110

                                                                           
Query: 167     ccaagaagcagaaggctg---------cgccggcaaaggcggtgaccgcgcccaaagagg 217
               |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 5420109 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 5420050

                                                      
Query: 218     ccgccaagaaggccaagaagcagccgccgcccaagaagg 256
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 5420049 acgccaagaaggccaagaagcagccgccgcccaagaagg 5420011



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                         
Query: 263     gcagcagctctgaggaggagtcatccgagtccgaggaggagg 304
               ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 5419992 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 5419951
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>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score =  133 bits (67), Expect = 5e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Minus

                                                                         
Query: 107   ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 166
             |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 89980 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 89921

                                                                         
Query: 167   ccaagaagcagaaggctg---------cgccggcaaaggcggtgaccgcgcccaaagagg 217
             |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 89920 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 89861

                                                    
Query: 218   ccgccaagaaggccaagaagcagccgccgcccaagaagg 256
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 89860 acgccaagaaggccaagaagcagccgccgcccaagaagg 89822



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 263   gcagcagctctgaggaggagtcatccgagtccgaggaggagg 304
             ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 89803 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 89762
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>dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K11, full
           insert sequence
          Length = 2089

 Score =  133 bits (67), Expect = 5e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                       
Query: 107 ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 166
           |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 163 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 222

                                                                       
Query: 167 ccaagaagcagaaggctg---------cgccggcaaaggcggtgaccgcgcccaaagagg 217
           |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 223 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 282

                                                  
Query: 218 ccgccaagaaggccaagaagcagccgccgcccaagaagg 256
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acgccaagaaggccaagaagcagccgccgcccaagaagg 321



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 263 gcagcagctctgaggaggagtcatccgagtccgaggaggagg 304
           ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 340 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 381
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>gb|BT018730.1| Zea mays clone EL01N0519D03.d mRNA sequence
          Length = 2316

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 127/153 (83%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                       
Query: 121 gggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcgccaagaagcagaag 180
           |||||||| || ||||| || || |||||||||||||| || ||||| ||||||||||||
Sbjct: 132 gggaagaaacgggaggcggaggaagagatcgagaaggccgtgagcgcgaagaagcagaag 191

                                                                       
Query: 181 gctgcgcc---ggcaaaggcggtgaccgcgcccaaagaggccgccaagaaggccaagaag 237
           || |||||   ||| ||||| ||| |  || ||||  ||| |||||||||| ||||||||
Sbjct: 192 gcggcgccaccggcgaaggccgtgccgacgtccaagaaggacgccaagaagtccaagaag 251

                                            
Query: 238 cagccgccgcccaagaaggttgacagcagcagc 270
           ||||| || |||||||||| ||| |||||||||
Sbjct: 252 cagcctccccccaagaaggctgagagcagcagc 284



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 373 tctgacgaggaaattgcaaagaagccttctgctaaacc 410
           ||||| ||||||  ||||||||||||| ||||||||||
Sbjct: 411 tctgatgaggaacctgcaaagaagcctgctgctaaacc 448



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 46 atgggcaagtcaagcaagaag 66
          |||||||||||||||||||||
Sbjct: 72 atgggcaagtcaagcaagaag 92
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>ref|XM_473923.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2124

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 232 aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 281
           ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 187 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 236



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 46 atgggcaagtcaagcaagaa 65
          ||||||||||||||||||||
Sbjct: 1  atgggcaagtcaagcaagaa 20
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                
Query: 232    aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 281
              ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 157788 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 157837



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     atgggcaagtcaagcaagaa 65
              ||||||||||||||||||||
Sbjct: 157516 atgggcaagtcaagcaagaa 157535
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 232      aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 281
                ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 31580105 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 31580154



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 46       atgggcaagtcaagcaagaa 65
                ||||||||||||||||||||
Sbjct: 31579833 atgggcaagtcaagcaagaa 31579852
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>dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G11, full
           insert sequence
          Length = 2447

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 232 aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 281
           ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 329 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 378



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 46  atgggcaagtcaagcaagaa 65
           ||||||||||||||||||||
Sbjct: 143 atgggcaagtcaagcaagaa 162
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>gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence
          Length = 2497

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 232 aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 281
           ||||||||||| || || ||||| ||||| ||||||||||||||||||||
Sbjct: 285 aagaagcagccccctccaaagaaagttgagagcagcagctctgaggagga 334
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>gb|AY111884.1| Zea mays CL19566_1 mRNA sequence
          Length = 931

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/96 (82%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                       
Query: 150 cgagaaggctgtaagcgccaagaagcagaaggctgcgcc---ggcaaaggcggtgaccgc 206
           ||||||||| || ||||| |||||||||||||| |||||   ||| ||||| ||| |  |
Sbjct: 789 cgagaaggccgtgagcgcgaagaagcagaaggcggcgccaccggcgaaggccgtgccgac 730

                                               
Query: 207 gcccaaagaggccgccaagaaggccaagaagcagcc 242
           | ||||  ||| |||||||||| |||||||||||||
Sbjct: 729 gtccaagaaggacgccaagaagtccaagaagcagcc 694



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 373 tctgacgaggaaattgcaaagaagccttctgctaaacc 410
           ||||| ||||||  ||||||||||||| ||||||||||
Sbjct: 539 tctgatgaggaacctgcaaagaagcctgctgctaaacc 502
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>gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histone H4, histone H2B, and
            histone H2A genes, complete cds
          Length = 4358

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 215  aggccgccaagaaggccaagaagcagcc 242
            ||||||||||||||||||||||| ||||
Sbjct: 3406 aggccgccaagaaggccaagaaggagcc 3379
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>gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1), histone H2A (ch2a-IV),
            and histone H2B (ch2b-IV) genes, complete cds
          Length = 4502

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 215  aggccgccaagaaggccaagaagcagcc 242
            ||||||||||||||||||||||| ||||
Sbjct: 3845 aggccgccaagaaggccaagaaggagcc 3872
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 215     aggccgccaagaaggccaagaag 237
               |||||||||||||||||||||||
Sbjct: 2718391 aggccgccaagaaggccaagaag 2718369
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 184   gcgccggcaaaggcggtgaccgcgccc 210
             |||||||||||||||| ||||||||||
Sbjct: 58242 gcgccggcaaaggcggagaccgcgccc 58268
to top
>gb|AF008943.1|AF008943 Crithidia fasciculata kinetoplast-associated protein p18-1 (KAP2-1)
           gene, complete cds
          Length = 764

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 215 aggccgccaagaaggccaagaag 237
           |||||||||||||||||||||||
Sbjct: 389 aggccgccaagaaggccaagaag 411
to top
>gb|BC025078.1| Mus musculus zinc finger, CCHC domain containing 10, mRNA (cDNA
           clone MGC:35654 IMAGE:4504126), complete cds
          Length = 1229

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 286 tccgagtccgaggaggaggagg 307
           ||||||||||||||||||||||
Sbjct: 477 tccgagtccgaggaggaggagg 456
to top
>gb|AC092229.2| Drosophila melanogaster clone BACR23I04, complete sequence
          Length = 202042

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 218 ccgccaagaaggccaagaagcagccgccgc 247
           |||||||||||| |||||| ||||||||||
Sbjct: 177 ccgccaagaaggacaagaaccagccgccgc 206
to top
>ref|XM_849267.1| PREDICTED: Canis familiaris similar to AF4/FMR2 family, member 3
            isoform 2 (LOC611584), mRNA
          Length = 3741

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 286  tccgagtccgaggaggaggagg 307
            ||||||||||||||||||||||
Sbjct: 2105 tccgagtccgaggaggaggagg 2084
to top
>ref|NM_057252.3| Drosophila melanogaster escargot CG3758-RA (esg), mRNA
          Length = 2287

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 218  ccgccaagaaggccaagaagcagccgccgc 247
            |||||||||||| |||||| ||||||||||
Sbjct: 1123 ccgccaagaaggacaagaaccagccgccgc 1152
to top
>ref|NM_026479.2| Mus musculus zinc finger, CCHC domain containing 10 (Zcchc10), mRNA
          Length = 1258

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 286 tccgagtccgaggaggaggagg 307
           ||||||||||||||||||||||
Sbjct: 462 tccgagtccgaggaggaggagg 441
to top
>gb|AY071590.1| Drosophila melanogaster RE64266 full length cDNA
          Length = 2285

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 218  ccgccaagaaggccaagaagcagccgccgc 247
            |||||||||||| |||||| ||||||||||
Sbjct: 1118 ccgccaagaaggacaagaaccagccgccgc 1147
to top
>dbj|AK169856.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630001B12
           product:2410141K03Rik protein (RIKEN cDNA 2410141K03
           gene) (Hypothetical retrovirus zinc finger-like domains
           structure containing protein), full insert sequence
          Length = 1197

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 286 tccgagtccgaggaggaggagg 307
           ||||||||||||||||||||||
Sbjct: 462 tccgagtccgaggaggaggagg 441
to top
>dbj|AK010803.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410141K03 product:hypothetical Retrovirus zinc
           finger-like domains structure containing protein, full
           insert sequence
          Length = 1290

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 286 tccgagtccgaggaggaggagg 307
           ||||||||||||||||||||||
Sbjct: 473 tccgagtccgaggaggaggagg 452
to top
>dbj|AK020177.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
           region cDNA, RIKEN full-length enriched library,
           clone:6720490O22 product:hypothetical Retrovirus zinc
           finger-like domains structure containing protein, full
           insert sequence
          Length = 1258

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 286 tccgagtccgaggaggaggagg 307
           ||||||||||||||||||||||
Sbjct: 462 tccgagtccgaggaggaggagg 441
to top
>gb|AC092247.1|AC092247 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
              BACR36B06, complete sequence
          Length = 183436

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 218    ccgccaagaaggccaagaagcagccgccgc 247
              |||||||||||| |||||| ||||||||||
Sbjct: 136784 ccgccaagaaggacaagaaccagccgccgc 136813
to top
>dbj|AK027985.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110061E09 product:hypothetical
           Retrovirus zinc finger-like domains structure containing
           protein, full insert sequence
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 286 tccgagtccgaggaggaggagg 307
           ||||||||||||||||||||||
Sbjct: 469 tccgagtccgaggaggaggagg 448
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 215     aggccgccaagaaggccaagaa 236
               ||||||||||||||||||||||
Sbjct: 1041307 aggccgccaagaaggccaagaa 1041328
to top
>ref|NM_214555.1| Strongylocentrotus purpuratus late histone H1-gamma (LOC373350),
           mRNA
          Length = 654

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 217 gccgccaagaaggccaagaagc 238
           ||||||||||||||||||||||
Sbjct: 457 gccgccaagaaggccaagaagc 478
to top
>gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-218N2, complete sequence
          Length = 201728

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 286   tccgagtccgaggaggaggagg 307
             ||||||||||||||||||||||
Sbjct: 50348 tccgagtccgaggaggaggagg 50327
to top
>gb|BC087902.1| Mus musculus zinc finger, CCHC domain containing 10, mRNA (cDNA
           clone MGC:107221 IMAGE:30505854), complete cds
          Length = 1256

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 286 tccgagtccgaggaggaggagg 307
           ||||||||||||||||||||||
Sbjct: 461 tccgagtccgaggaggaggagg 440
to top
>gb|BT023984.1| Zea mays clone EL01N0314H01 mRNA sequence
          Length = 2132

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 373  tctgacgaggaaattgcaaagaagccttctgctaaacc 410
            ||||| ||||||  ||||||||||||| ||||||||||
Sbjct: 1950 tctgatgaggaacctgcaaagaagcctgctgctaaacc 1913
to top
>gb|AE003647.3| Drosophila melanogaster chromosome 2L, section 56 of 83 of the complete
             sequence
          Length = 261949

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 218   ccgccaagaaggccaagaagcagccgccgc 247
             |||||||||||| |||||| ||||||||||
Sbjct: 69418 ccgccaagaaggacaagaaccagccgccgc 69447
to top
>gb|L43510.1|PEAORF Pisum sativum L. (clone na-481-5) mRNA, complete cds
          Length = 2188

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 46  atgggcaagtcaagcaagaagtccgc 71
           |||||||||||||||||||| |||||
Sbjct: 75  atgggcaagtcaagcaagaaatccgc 100
to top
>gb|M16033.1|SUSHISHA1G Sea urchin (S.purpuratus) late histone H1-gamma gene, complete cds
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 217 gccgccaagaaggccaagaagc 238
           ||||||||||||||||||||||
Sbjct: 897 gccgccaagaaggccaagaagc 918
to top
>emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on chromosome 11, complete
             sequence
          Length = 155262

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 286   tccgagtccgaggaggaggagg 307
             ||||||||||||||||||||||
Sbjct: 41759 tccgagtccgaggaggaggagg 41738
to top
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence
          Length = 202155

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 263    gcagcagctctgaggaggagt 283
              |||||||||||||||||||||
Sbjct: 148511 gcagcagctctgaggaggagt 148531
to top
>gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA, complete cds
          Length = 1114

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 gccgccaagaaggccaagaag 237
           |||||||||||||||||||||
Sbjct: 809 gccgccaagaaggccaagaag 829
to top
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003A09, complete sequence
          Length = 167222

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   gccaagaagcagccgccgcc 248
             ||||||||||||||||||||
Sbjct: 98407 gccaagaagcagccgccgcc 98388
to top
>ref|XM_957859.1| Neurospora crassa OR74A hypothetical protein (NCU07831.1) partial
           mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 cgagtccgaggaggaggagg 307
           ||||||||||||||||||||
Sbjct: 222 cgagtccgaggaggaggagg 241
to top
>ref|XM_328536.1| Neurospora crassa OR74A hypothetical protein (NCU07831.1) partial
           mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 cgagtccgaggaggaggagg 307
           ||||||||||||||||||||
Sbjct: 222 cgagtccgaggaggaggagg 241
to top
>gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosome 10, complete sequence
          Length = 131580

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    ccaagaaggccaagaagcag 240
              ||||||||||||||||||||
Sbjct: 120715 ccaagaaggccaagaagcag 120734



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   ccaagaaggccaagaagcag 240
             ||||||||||||||||||||
Sbjct: 81955 ccaagaaggccaagaagcag 81936
to top
>ref|XR_002639.1| PREDICTED: Mus musculus similar to DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 21a (LOC669723), mRNA
          Length = 2224

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ccaagaaggccaagaagcag 240
           ||||||||||||||||||||
Sbjct: 273 ccaagaaggccaagaagcag 292
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 112      gggaaggccgggaagaagcg 131
                ||||||||||||||||||||
Sbjct: 10181827 gggaaggccgggaagaagcg 10181846



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     gccaagaagcagccgccgcc 248
               ||||||||||||||||||||
Sbjct: 2060984 gccaagaagcagccgccgcc 2060965
to top
>ref|XM_549104.2| PREDICTED: Canis familiaris similar to bromo domain-containing
            protein disrupted in leukemia (LOC491984), mRNA
          Length = 6039

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  gcagcagctctgaggaggag 282
            ||||||||||||||||||||
Sbjct: 2908 gcagcagctctgaggaggag 2927
to top
>ref|XR_003676.1| PREDICTED: Mus musculus similar to DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 21a (LOC672033), mRNA
          Length = 2290

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ccaagaaggccaagaagcag 240
           ||||||||||||||||||||
Sbjct: 160 ccaagaaggccaagaagcag 179
to top
>gb|AC132384.2| Mus musculus BAC clone RP23-438F16 from chromosome 10, complete sequence
          Length = 182097

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    ccaagaaggccaagaagcag 240
              ||||||||||||||||||||
Sbjct: 143209 ccaagaaggccaagaagcag 143228



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   ccaagaaggccaagaagcag 240
             ||||||||||||||||||||
Sbjct: 63738 ccaagaaggccaagaagcag 63719
to top
>ref|XM_854087.1| PREDICTED: Canis familiaris hypothetical protein LOC607721
            (LOC607721), mRNA
          Length = 2103

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cagcagcagctctgaggagg 280
            ||||||||||||||||||||
Sbjct: 1854 cagcagcagctctgaggagg 1835
to top
>gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome 5, complete sequence
          Length = 184772

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    cagcagcagctctgaggagg 280
              ||||||||||||||||||||
Sbjct: 130779 cagcagcagctctgaggagg 130760
to top
>gb|AC151904.6| Mus musculus BAC clone RP23-233K6 from chromosome 10, complete sequence
          Length = 186667

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    ccaagaaggccaagaagcag 240
              ||||||||||||||||||||
Sbjct: 171416 ccaagaaggccaagaagcag 171435



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ccaagaaggccaagaagcag 240
              ||||||||||||||||||||
Sbjct: 132656 ccaagaaggccaagaagcag 132637



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ccaagaaggccaagaagcag 240
              ||||||||||||||||||||
Sbjct: 118807 ccaagaaggccaagaagcag 118788
to top
>emb|AJ973181.1| Sphaerechinus granularis mRNA for translation elongation factor 1B
           delta 2 subunit (eef1Bdelta2 gene)
          Length = 816

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 cgccaagaaggccaagaagc 238
           ||||||||||||||||||||
Sbjct: 519 cgccaagaaggccaagaagc 538
to top
>gb|BC030149.2| Homo sapiens cDNA clone IMAGE:4842353, partial cds
          Length = 1339

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 35  gccagcggtccatgggcaagtcaa 58
           |||||||| |||||||||||||||
Sbjct: 854 gccagcggaccatgggcaagtcaa 831
to top
>ref|XM_504483.1| Yarrowia lipolytica CLIB122, YALI0E27808g predicted mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 aggccgccaagaaggccaag 234
           ||||||||||||||||||||
Sbjct: 809 aggccgccaagaaggccaag 828
to top
>emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512N4 on chromosome 10 Contains part
              of the gene for MOB protein, two novel genes and a CpG
              island, complete sequence
          Length = 181300

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    gacgaggaaattgcaaagaa 395
              ||||||||||||||||||||
Sbjct: 118752 gacgaggaaattgcaaagaa 118733
to top
>gb|AY309922.1| Homo sapiens BH3 interacting domain death agonist (BID) gene, complete
             cds
          Length = 42509

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    gccagcggtccatgggcaagtcaa 58
             |||||||| |||||||||||||||
Sbjct: 12282 gccagcggaccatgggcaagtcaa 12259
to top
>emb|Y14236.1|SGY14236 Sphaerichinus granularis mRNA for elongation factor-1d, 2639 bp
          Length = 2639

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 cgccaagaaggccaagaagc 238
           ||||||||||||||||||||
Sbjct: 520 cgccaagaaggccaagaagc 539
to top
>emb|Y14235.1|SGY14235 Sphaerichinus granularis mRNA for elongation factor-1d, 1931 bp
          Length = 1931

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 cgccaagaaggccaagaagc 238
           ||||||||||||||||||||
Sbjct: 520 cgccaagaaggccaagaagc 539
to top
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    aagaggccgccaagaaggcc 231
              ||||||||||||||||||||
Sbjct: 332925 aagaggccgccaagaaggcc 332944



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    aagaggccgccaagaaggcc 231
              ||||||||||||||||||||
Sbjct: 332775 aagaggccgccaagaaggcc 332794
to top
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    aagaggccgccaagaaggcc 231
              ||||||||||||||||||||
Sbjct: 278170 aagaggccgccaagaaggcc 278189



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    aagaggccgccaagaaggcc 231
              ||||||||||||||||||||
Sbjct: 278038 aagaggccgccaagaaggcc 278057
to top
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   aagaggccgccaagaaggcc 231
             ||||||||||||||||||||
Sbjct: 88680 aagaggccgccaagaaggcc 88661
to top
>gb|AC163439.3| Mus musculus chromosome 8, clone RP23-390F12, complete sequence
          Length = 205063

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    agaaggccaagaagcagccg 243
              ||||||||||||||||||||
Sbjct: 168421 agaaggccaagaagcagccg 168440
to top
>gb|BC047432.1| Homo sapiens cDNA clone IMAGE:5288883
          Length = 2155

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 35   gccagcggtccatgggcaagtcaa 58
            |||||||| |||||||||||||||
Sbjct: 1740 gccagcggaccatgggcaagtcaa 1717
to top
>gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sythase gamma mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 2168

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 214  gaggccgccaagaaggccaagaag 237
            ||||| ||||||||||||||||||
Sbjct: 1452 gaggcggccaagaaggccaagaag 1429
to top
>emb|CR620309.1| full-length cDNA clone CS0DL011YM05 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 1525

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 35   gccagcggtccatgggcaagtcaa 58
            |||||||| |||||||||||||||
Sbjct: 1384 gccagcggaccatgggcaagtcaa 1361
to top
>gb|AC135106.8| Pan troglodytes clone rp43-48a6, complete sequence
          Length = 181842

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    gccagcggtccatgggcaagtcaa 58
             |||||||| |||||||||||||||
Sbjct: 52411 gccagcggaccatgggcaagtcaa 52434
to top
>dbj|AK055641.1| Homo sapiens cDNA FLJ31079 fis, clone HSYRA2001595
          Length = 2188

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 35   gccagcggtccatgggcaagtcaa 58
            |||||||| |||||||||||||||
Sbjct: 1789 gccagcggaccatgggcaagtcaa 1766
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     gccggcaaaggcggtgaccg 205
               ||||||||||||||||||||
Sbjct: 1835522 gccggcaaaggcggtgaccg 1835541
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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   gggaaggccgggaagaagcg 131
             ||||||||||||||||||||
Sbjct: 43240 gggaaggccgggaagaagcg 43259
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>gb|AC016026.15| Homo sapiens chromosome 22 clone b461k10 map 22q11, complete sequence
          Length = 187587

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 35   gccagcggtccatgggcaagtcaa 58
            |||||||| |||||||||||||||
Sbjct: 8671 gccagcggaccatgggcaagtcaa 8694
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>gb|AC016025.14| Homo sapiens chromosome 22 clone b342k14 map 22q11, complete sequence
          Length = 180269

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 35     gccagcggtccatgggcaagtcaa 58
              |||||||| |||||||||||||||
Sbjct: 107814 gccagcggaccatgggcaagtcaa 107837
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>gb|AC007845.14| Homo sapiens chromosome 22 clone 678g6 map 22q11, complete sequence
          Length = 134036

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    gccagcggtccatgggcaagtcaa 58
             |||||||| |||||||||||||||
Sbjct: 35813 gccagcggaccatgggcaagtcaa 35836
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 288      cgagtccgaggaggaggagg 307
                ||||||||||||||||||||
Sbjct: 19568265 cgagtccgaggaggaggagg 19568284
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 112      gggaaggccgggaagaagcg 131
                ||||||||||||||||||||
Sbjct: 10179928 gggaaggccgggaagaagcg 10179947



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     gccaagaagcagccgccgcc 248
               ||||||||||||||||||||
Sbjct: 2060996 gccaagaagcagccgccgcc 2060977
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>gb|AC112788.4| Homo sapiens BAC clone RP11-1221I12 from 2, complete sequence
          Length = 49322

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   agaaggccaagaagcagccg 243
             ||||||||||||||||||||
Sbjct: 39321 agaaggccaagaagcagccg 39302
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>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence
          Length = 182748

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ccaagaaggccaagaagcag 240
              ||||||||||||||||||||
Sbjct: 169955 ccaagaaggccaagaagcag 169936
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>gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome 10, complete sequence
          Length = 182371

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ccaagaaggccaagaagcag 240
              ||||||||||||||||||||
Sbjct: 164185 ccaagaaggccaagaagcag 164166
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      gcgccgtcggccgtccttcc 107
               ||||||||||||||||||||
Sbjct: 6774283 gcgccgtcggccgtccttcc 6774302



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     aagaggccgccaagaaggcc 231
               ||||||||||||||||||||
Sbjct: 2519173 aagaggccgccaagaaggcc 2519154
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>gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 141003

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 35     gccagcggtccatgggcaagtcaa 58
              |||||||| |||||||||||||||
Sbjct: 138479 gccagcggaccatgggcaagtcaa 138456
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>ref|XM_342141.2| PREDICTED: Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide
           21b (predicted) (Ddx21b_predicted), mRNA
          Length = 4951

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ccaagaaggccaagaagcag 240
           ||||||||||||||||||||
Sbjct: 365 ccaagaaggccaagaagcag 384
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>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0506C10
          Length = 150549

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   cgagtccgaggaggaggagg 307
             ||||||||||||||||||||
Sbjct: 49997 cgagtccgaggaggaggagg 50016
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     gccaagaaggccaagaagca 239
               ||||||||||||||||||||
Sbjct: 2697943 gccaagaaggccaagaagca 2697962
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>dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C12, full
           insert sequence
          Length = 963

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 gggaaggccgggaagaagcg 131
           ||||||||||||||||||||
Sbjct: 581 gggaaggccgggaagaagcg 600
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>gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 mRNA sequence
          Length = 1082

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 ccgccaagaaggccaagaag 237
           ||||||||||||||||||||
Sbjct: 729 ccgccaagaaggccaagaag 748
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>dbj|AB076892.1| Ciona intestinalis Ci-Noto9 mRNA for notochord specific gene 9
           protein, partial cds
          Length = 3537

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  aagtcaagcaagaagtccgc 71
           ||||||||||||||||||||
Sbjct: 414 aagtcaagcaagaagtccgc 433
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>gb|BC105878.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a, mRNA
           (cDNA clone MGC:124980 IMAGE:7126328), complete cds
          Length = 4413

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ccaagaaggccaagaagcag 240
           ||||||||||||||||||||
Sbjct: 262 ccaagaaggccaagaagcag 281
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>dbj|AK114059.1| Ciona intestinalis cDNA, clone:cicl025p19, full insert sequence
          Length = 2220

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  aagtcaagcaagaagtccgc 71
           ||||||||||||||||||||
Sbjct: 596 aagtcaagcaagaagtccgc 615
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     gccaagaaggccaagaagca 239
               ||||||||||||||||||||
Sbjct: 4150771 gccaagaaggccaagaagca 4150790



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     gccaagaaggccaagaagca 239
               ||||||||||||||||||||
Sbjct: 4150579 gccaagaaggccaagaagca 4150598



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     gccaagaaggccaagaagca 239
               ||||||||||||||||||||
Sbjct: 4150384 gccaagaaggccaagaagca 4150403
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>ref|NM_001037201.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a
           (Ddx21a), mRNA
          Length = 4413

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ccaagaaggccaagaagcag 240
           ||||||||||||||||||||
Sbjct: 262 ccaagaaggccaagaagcag 281
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     aggccgccaagaaggccaag 234
               ||||||||||||||||||||
Sbjct: 3286622 aggccgccaagaaggccaag 3286603
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>gb|U16725.1|CRU16725 Chlamydomonas reinhardtii histone H3 (ch3-III), histone H4 (ch4-III),
            histone H2B (ch2b-III) and histone H2A (ch2a-III) genes,
            complete cds
          Length = 4582

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 215  aggccgccaagaaggccaagaagcagcc 242
            |||||| |||||||||||||||| ||||
Sbjct: 2704 aggccggcaagaaggccaagaaggagcc 2677
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>gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-II), histone H4 (ch4-II),
            histone H2B (ch2b-II) and histone H2A (ch2a-II) genes,
            complete cds
          Length = 3777

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 215  aggccgccaagaaggccaagaagcagcc 242
            ||||||| ||||||||||||||| ||||
Sbjct: 2819 aggccgcgaagaaggccaagaaggagcc 2792
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    aggccgccaagaaggccaag 234
              ||||||||||||||||||||
Sbjct: 325068 aggccgccaagaaggccaag 325087
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>emb|AL590619.9| Mouse DNA sequence from clone RP23-357B4 on chromosome 8, complete
              sequence
          Length = 198540

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    agaaggccaagaagcagccg 243
              ||||||||||||||||||||
Sbjct: 102862 agaaggccaagaagcagccg 102881
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>gb|M83207.1|DROESCARGO Drosophila melanogaster developmental escargot-encoded protein gene,
            complete cds
          Length = 4106

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 218  ccgccaagaaggccaagaagcagccgcc 245
            |||||||||||| |||||| ||||||||
Sbjct: 1899 ccgccaagaaggacaagaaccagccgcc 1926
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>dbj|D87065.1| Triticum aestivum gene for histone H1, complete cds, clone:TH325
          Length = 2541

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 218  ccgccaagaaggccaagaag 237
            ||||||||||||||||||||
Sbjct: 1821 ccgccaagaaggccaagaag 1840
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>dbj|D87064.1| Triticum aestivum gene for histone H1, complete cds, clone:TH315
          Length = 3025

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 218  ccgccaagaaggccaagaag 237
            ||||||||||||||||||||
Sbjct: 1810 ccgccaagaaggccaagaag 1829


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,340,668
Number of Sequences: 3902068
Number of extensions: 4340668
Number of successful extensions: 96126
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94964
Number of HSP's gapped (non-prelim): 1161
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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