>T3RE_SALTY (P40815) Type III restriction-modification system StyLTI enzyme res|
           (EC 3.1.21.5)
          Length = 990

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 164 GSGLRLGLDENPDAIISGEWPENFS-LLSYDD 256
           G GLRL +DEN   +   EWP   S L+ YD+
Sbjct: 534 GRGLRLPVDENGHRVHQEEWPSRLSFLIGYDE 565

>T3RE_BACC1 (P25241) Type III restriction-modification system Bce10987IP enzyme|
           res (EC 3.1.21.5)
          Length = 987

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 164 GSGLRLGLDENPDAIISGEWPENFS-LLSYDD 256
           G GLRL +DE    I   EWP   + L+ YD+
Sbjct: 536 GRGLRLPVDETGHRIQQDEWPTRLAFLIGYDE 567

>GID_LACLA (Q9CG79) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 447

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 2   RQHPQHKTRRIASMACINTLQSCSM 76
           +Q PQHKT + A + C N+L+  ++
Sbjct: 38  KQTPQHKTDKFAELVCSNSLRGAAI 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,072,853
Number of Sequences: 219361
Number of extensions: 382527
Number of successful extensions: 1044
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)