ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF498268.1| Haynaldia villosa clone kong28 mRNA 377 e-101
2gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA 317 2e-83
3ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group... 155 1e-34
4ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group... 155 1e-34
5ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group... 155 1e-34
6ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA 155 1e-34
7gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planth... 155 1e-34
8gb|AY346465.1| Oryza sativa (indica cultivar-group) putative bro... 155 1e-34
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
10dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
11dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
12dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
13dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
14dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
15dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
16dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
17dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
18dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 3e-32
19gb|AY112171.1| Zea mays CL11049_1 mRNA sequence 105 1e-19
20ref|XM_471230.1| Oryza sativa (japonica cultivar-group), predic... 101 2e-18
21emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4,... 101 2e-18
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
23dbj|AK066843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
24dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
25dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
26gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, comp... 46 0.094
27gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome... 46 0.094
28gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosom... 46 0.094
29gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, com... 42 1.5
30gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, com... 42 1.5
31gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, comple... 42 1.5
32gb|AF487888.1| Gallus gallus suppressor of fused mRNA, complete cds 42 1.5
33gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, comple... 42 1.5
34ref|NG_004818.1| Gallus gallus cadherin-related neuronal recepto... 42 1.5
35ref|NM_204264.1| Gallus gallus suppressor of fused homolog (Dros... 42 1.5
36dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 1.5
37gb|U29204.1|HSU29204 Human mineralocorticoid receptor (hmr1a) ge... 42 1.5
38gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 1.5
39gb|U48393.1|HSU48393 Human mineralocorticoid receptor alpha (hMR... 42 1.5
40emb|X97925.1|HSHMRPROM H.sapiens hMR gene, complete promoter region 42 1.5
41gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.8
42gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.8
43ref|XM_611254.2| PREDICTED: Bos taurus hypothetical LOC508098 (L... 40 5.8
44gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 5.8
45ref|NM_031392.2| Mus musculus WD repeat domain 6 (Wdr6), mRNA 40 5.8
46ref|XM_653577.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.8
47gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, com... 40 5.8
48ref|NM_015278.3| Homo sapiens SAM and SH3 domain containing 1 (S... 40 5.8
49gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
50gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.8
51ref|XM_850346.1| PREDICTED: Canis familiaris similar to eukaryot... 40 5.8
52emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete ch... 40 5.8
53ref|XM_815829.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.8
54gb|BC035951.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone... 40 5.8
55gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, co... 40 5.8
56gb|BC053993.1| Mus musculus cDNA clone IMAGE:6314898, **** WARNI... 40 5.8
57gb|AY351960.1|AY351960S01 Homo sapiens PEPE1 gene, exon 1 40 5.8
58emb|AL513164.13| Human DNA sequence from clone RP11-400P17 on ch... 40 5.8
59gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.8
60ref|XM_964282.1| PREDICTED: Tribolium castaneum similar to CG863... 40 5.8
61gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.8
62emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 5.8
63gb|BC054367.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone... 40 5.8
64gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 5.8
65gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Ca... 40 5.8
66dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.8
67dbj|AK146617.1| Mus musculus 17 days embryo stomach cDNA, RIKEN ... 40 5.8
68dbj|AK166265.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 5.8
69dbj|AK163752.1| Mus musculus adult male corpus striatum cDNA, RI... 40 5.8
70dbj|AK169357.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 5.8
71dbj|AK165935.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 40 5.8
72dbj|AK052235.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 5.8
73dbj|AK046119.1| Mus musculus adult male corpora quadrigemina cDN... 40 5.8
74gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.8
75dbj|AK079258.1| Mus musculus adult male urinary bladder cDNA, RI... 40 5.8
76dbj|AK037181.1| Mus musculus 6 days neonate skin cDNA, RIKEN ful... 40 5.8
77gb|AF348591.1|AF348591 Mus musculus WD repeat protein WDR6 mRNA,... 40 5.8
78dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
79dbj|AK205565.1| Mus musculus cDNA, clone:Y2G0102B21, strand:minu... 40 5.8
80dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.8
81dbj|AK025495.1| Homo sapiens cDNA: FLJ21842 fis, clone HEP01849 40 5.8
82emb|AJ335985.1|HSA335985 Homo sapiens genomic sequence surroundi... 40 5.8
83emb|AJ335962.1|HSA335962 Homo sapiens genomic sequence surroundi... 40 5.8
84emb|AJ328720.1|HSA328720 Homo sapiens genomic sequence surroundi... 40 5.8
85gb|BC050894.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone... 40 5.8
86dbj|AK063232.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
87tpe|BN000088.1|HSA000088 TPA: TPA_exp: Homo sapiens mRNA for put... 40 5.8
88emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-4... 40 5.8
89emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1... 40 5.8
90emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1... 40 5.8
91gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
92emb|AJ507735.1|HSA507735 Homo sapiens mRNA for putative adapter ... 40 5.8
93emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chro... 40 5.8
94dbj|AB018333.1| Homo sapiens mRNA for KIAA0790 protein, partial cds 40 5.8
95dbj|AB041854.1| Mus musculus wdp122 mRNA for WD-repeat protein p... 40 5.8 
>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA
          Length = 1474

 Score =  377 bits (190), Expect = e-101
 Identities = 231/244 (94%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                       
Query: 34  agcatccatggcgtgcatcaataccttgcagagctgctccatgttcaagggggccaaggc 93
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 874 agcatccatggcgtgcatcaataccttgcagagctgctccatgttcaaaggggccaaggc 815

                                                                       
Query: 94  cgaggccagaaggggcagcagagccggcagcggcgggagcttcgggtgccgggcctccac 153
            ||||||||||||||||    ||||  | |||  |||||||||||||||||||| |||||
Sbjct: 814 tgaggccagaaggggcaa---agccaccggcgcagggagcttcgggtgccgggcgtccac 758

                                                                       
Query: 154 gttcatggacgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatctc 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gttcatggacgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatctc 698

                                                                       
Query: 214 cggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacctcca 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 697 cggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcctacctcca 638

               
Query: 274 gtcc 277
           ||||
Sbjct: 637 gtcc 634



 Score =  176 bits (89), Expect = 4e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccaccttcccacgccggcgatcagcaccgaggggcgctcctgcgcgaggccatgtcgacg 361
           |||||||||||||| | ||||||||| || ||| ||||||||||||||||||||||||||
Sbjct: 612 ccaccttcccacgctgccgatcagcagcgggggccgctcctgcgcgaggccatgtcgacg 553

                                                                       
Query: 362 cccgtgctgatggccacagcggaccaggcactggtggaggttgaaggacacttccagctc 421
           ||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||
Sbjct: 552 cccgtgctgatggtcacagcggagcaggcgctggtggaggttgaaggccactttcagctc 493

                    
Query: 422 gtgtcaggc 430
           |||||||||
Sbjct: 492 gtgtcaggc 484
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>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA
          Length = 1061

 Score =  317 bits (160), Expect = 2e-83
 Identities = 224/244 (91%), Gaps = 6/244 (2%)
 Strand = Plus / Plus

                                                                       
Query: 33  tagcatccatggcgtgcatcaataccttgcagagctgctccatgttcaagggggccaagg 92
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 36  tagcatccatggcgtgcatcaataccttgcagagctgctccatgttcaaaggggccaaga 95

                                                                       
Query: 93  ccgaggccagaaggggcagcagagccggcagcggcgggagcttcgggtgccgggcctcca 152
              |||||||||| || ||   ||||   || ||||||| ||| | ||||||||| ||||
Sbjct: 96  gtaaggccagaagaggtag---agcc---agtggcgggacctttgagtgccgggcgtcca 149

                                                                       
Query: 153 cgttcatggacgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatct 212
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 150 cgttcatggacgggagcgggctccggctcgggctcgacgagaaccccgatgccatcatct 209

                                                                       
Query: 213 ccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacctcc 272
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ccggggagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacctcc 269

               
Query: 273 agtc 276
           ||||
Sbjct: 270 agtc 273



 Score =  165 bits (83), Expect = 1e-37
 Identities = 113/123 (91%)
 Strand = Plus / Plus

                                                                       
Query: 308 tcccacgccggcgatcagcaccgaggggcgctcctgcgcgaggccatgtcgacgcccgtg 367
           ||||| |||||||||||||| || ||| | |||||||| |||||||||||||||||||||
Sbjct: 302 tcccatgccggcgatcagcagcgggggcctctcctgcgtgaggccatgtcgacgcccgtg 361

                                                                       
Query: 368 ctgatggccacagcggaccaggcactggtggaggttgaaggacacttccagctcgtgtca 427
           ||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 362 ctgatggtcacagcggagcaggcgctggtggaggttgaaggccacttccagctcgtgtca 421

              
Query: 428 ggc 430
           |||
Sbjct: 422 ggc 424
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>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 916

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 260 cgatctccgcgcctacctccagtc 283
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>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 1002

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 260 cgatctccgcgcctacctccagtc 283
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>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 956

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 149 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 205

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 206 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 265

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 266 cgatctccgcgcctacctccagtc 289
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>ref|XM_468415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 251

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 252 cgatctccgcgcctacctccagtc 275
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>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced
           resistance protein 1 (Bi1) mRNA, complete cds
          Length = 1098

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 401 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 457

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 458 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 517

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 518 cgatctccgcgcctacctccagtc 541
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>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper
           susceptibility protein Hd002A mRNA, complete cds
          Length = 1265

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 567 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 623

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 624 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 683

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 684 cgatctccgcgcctacctccagtc 707
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                            
Query: 133      cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
                |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 35110983 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 35111039

                                                                            
Query: 193      gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
                |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 35111040 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 35111099

                                        
Query: 253      cgacctccgcgcatacctccagtc 276
                ||| |||||||| |||||||||||
Sbjct: 35111100 cgatctccgcgcctacctccagtc 35111123



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 205     catcatctccggcgagtggcccgagaacttctccctc 241
               |||| ||||||||||||||| ||| ||||||||||||
Sbjct: 8855051 catcgtctccggcgagtggctcgataacttctccctc 8855087
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1202_E07
          Length = 145014

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                        
Query: 133  cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
            |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 6339 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 6395

                                                                        
Query: 193  gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
            |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 6396 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 6455

                                    
Query: 253  cgacctccgcgcatacctccagtc 276
            ||| |||||||| |||||||||||
Sbjct: 6456 cgatctccgcgcctacctccagtc 6479
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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                         
Query: 133   cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
             |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 84146 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 84202

                                                                         
Query: 193   gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
             |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 84203 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 84262

                                     
Query: 253   cgacctccgcgcatacctccagtc 276
             ||| |||||||| |||||||||||
Sbjct: 84263 cgatctccgcgcctacctccagtc 84286
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>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full
           insert sequence
          Length = 833

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 251

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 252 cgatctccgcgcctacctccagtc 275
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>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full
           insert sequence
          Length = 994

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 251

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 252 cgatctccgcgcctacctccagtc 275
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>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full
           insert sequence
          Length = 1002

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 260 cgatctccgcgcctacctccagtc 283
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>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full
           insert sequence
          Length = 1514

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 136 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 192

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 193 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 252

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 253 cgatctccgcgcctacctccagtc 276
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>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full
            insert sequence
          Length = 4217

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Minus

                                                                        
Query: 133  cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
            |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 3207 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 3151

                                                                        
Query: 193  gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
            |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 3150 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 3091

                                    
Query: 253  cgacctccgcgcatacctccagtc 276
            ||| |||||||| |||||||||||
Sbjct: 3090 cgatctccgcgcctacctccagtc 3067
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>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full
           insert sequence
          Length = 955

 Score =  155 bits (78), Expect = 1e-34
 Identities = 128/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 148 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 204

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 205 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 264

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||||||| |||||||||||
Sbjct: 265 cgatctccgcgcctacctccagtc 288
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>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full
           insert sequence
          Length = 916

 Score =  147 bits (74), Expect = 3e-32
 Identities = 127/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcgggtgccgggcctccacgttcatggacgggagcgggctccggctcgggctcgacga 192
           |||| |||||||||| || ||||||||||||||||||   |||||||| | | |||||||
Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199

                                                                       
Query: 193 gaaccccgacgccatcatctccggcgagtggcccgagaacttctccctcctcagctacga 252
           |||||| || |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaacttctccctgctcagctacga 259

                                   
Query: 253 cgacctccgcgcatacctccagtc 276
           ||| |||| ||| |||||||||||
Sbjct: 260 cgatctccacgcctacctccagtc 283
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>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence
          Length = 803

 Score =  105 bits (53), Expect = 1e-19
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                       
Query: 173 ctccggctcgggctcgacgagaaccccgacgccatcatctccggcgagtggcccgagaac 232
           |||||||||| ||| |||||||||||||| || ||||||||      |||||||| ||||
Sbjct: 82  ctccggctcgagctggacgagaaccccgaggcgatcatctcnnnnncgtggcccgggaac 141

                                                       
Query: 233 ttctccctcctcagctacgacgacctccgcgcatacctccagtc 276
           | |||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 142 tgctccctcctcagctacgacgacctccgcgcctacctcgagtc 185
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>ref|XM_471230.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 663

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                       
Query: 210 tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 269
           |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 197 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 256

                  
Query: 270 tccagtc 276
           || ||||
Sbjct: 257 tcgagtc 263
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>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20,
             complete sequence
          Length = 138572

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                         
Query: 210   tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 269
             |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 32244 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 32185

                    
Query: 270   tccagtc 276
             || ||||
Sbjct: 32184 tcgagtc 32178
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                           
Query: 210     tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 269
               |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 2416342 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 2416283

                      
Query: 270     tccagtc 276
               || ||||
Sbjct: 2416282 tcgagtc 2416276
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>dbj|AK066843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082B01, full
           insert sequence
          Length = 964

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                       
Query: 210 tctccggcgagtggcccgagaacttctccctcctcagctacgacgacctccgcgcatacc 269
           |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 287 tctccggcgagtggccggagaacttctccctcctcagctacgccgacctccgcgcctacc 346

                  
Query: 270 tccagtc 276
           || ||||
Sbjct: 347 tcgagtc 353
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>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0613F08
          Length = 142937

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 205   catcatctccggcgagtggcccgagaacttctccctc 241
             |||| ||||||||||||||| ||| ||||||||||||
Sbjct: 60069 catcgtctccggcgagtggctcgataacttctccctc 60105
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>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0052K15
          Length = 156250

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 205    catcatctccggcgagtggcccgagaacttctccctc 241
              |||| ||||||||||||||| ||| ||||||||||||
Sbjct: 154130 catcgtctccggcgagtggctcgataacttctccctc 154166
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>gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, complete sequence
          Length = 236139

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 52     caataccttgcagagctgctcca 74
              |||||||||||||||||||||||
Sbjct: 100404 caataccttgcagagctgctcca 100382
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>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence
          Length = 218608

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 389   gcactggtggaggttgaaggaca 411
             |||||||||||||||||||||||
Sbjct: 45589 gcactggtggaggttgaaggaca 45611
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>gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosome 12, complete sequence
          Length = 208332

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 389    gcactggtggaggttgaaggaca 411
              |||||||||||||||||||||||
Sbjct: 192989 gcactggtggaggttgaaggaca 193011
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>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence
          Length = 186659

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 168   gcgggctccggctcgggctcg 188
             |||||||||||||||||||||
Sbjct: 12555 gcgggctccggctcgggctcg 12535
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>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence
          Length = 168986

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 168   gcgggctccggctcgggctcg 188
             |||||||||||||||||||||
Sbjct: 30479 gcgggctccggctcgggctcg 30459
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>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence
          Length = 187517

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 98299 ggacgggcgcgggctcgggctcgggctcg 98327



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 89238 ggacgggcgcgggctcgggctcgggctcg 89266



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 80055 ggacgggcgcgggctcgggctcgggctcg 80083



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 71030 ggacgggcgcgggctcgggctcgggctcg 71058



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 64607 ggacgggcgcgggctcgggctcgggctcg 64635



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 34905 ggacgggcgcgggctcgggctcgggctcg 34933
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>gb|AF487888.1| Gallus gallus suppressor of fused mRNA, complete cds
          Length = 1455

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 168 gcgggctccggctcgggctcg 188
           |||||||||||||||||||||
Sbjct: 43  gcgggctccggctcgggctcg 63
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>gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, complete sequence
          Length = 181245

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 123   gcggcgggagcttcgggtgccgggc 147
             ||||||||||||| |||||||||||
Sbjct: 45056 gcggcgggagcttggggtgccgggc 45080
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>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10)
          Length = 98944

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 19840 ggacgggcgcgggctcgggctcgggctcg 19868



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 160   ggacgggagcgggctccggctcgggctcg 188
             ||||||| |||||||| ||||||||||||
Sbjct: 10779 ggacgggcgcgggctcgggctcgggctcg 10807



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 160  ggacgggagcgggctccggctcgggctcg 188
            ||||||| |||||||| ||||||||||||
Sbjct: 1596 ggacgggcgcgggctcgggctcgggctcg 1624
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>ref|NM_204264.1| Gallus gallus suppressor of fused homolog (Drosophila) (SUFU), mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 168 gcgggctccggctcgggctcg 188
           |||||||||||||||||||||
Sbjct: 43  gcgggctccggctcgggctcg 63
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 190    cgagaaccccgacgccatcatctcc 214
              |||| ||||||||||||||||||||
Sbjct: 439047 cgagcaccccgacgccatcatctcc 439071
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>gb|U29204.1|HSU29204 Human mineralocorticoid receptor (hmr1a) gene, 5' untranslated
           region
          Length = 2105

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 123 gcggcgggagcttcgggtgccgggc 147
           ||||||||||||| |||||||||||
Sbjct: 623 gcggcgggagcttggggtgccgggc 599
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 190   cgagaaccccgacgccatcatctcc 214
             |||| ||||||||||||||||||||
Sbjct: 87690 cgagcaccccgacgccatcatctcc 87714
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>gb|U48393.1|HSU48393 Human mineralocorticoid receptor alpha (hMR) gene, promoter, exon 1
          Length = 1771

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 123 gcggcgggagcttcgggtgccgggc 147
           ||||||||||||| |||||||||||
Sbjct: 643 gcggcgggagcttggggtgccgggc 619
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>emb|X97925.1|HSHMRPROM H.sapiens hMR gene, complete promoter region
          Length = 8661

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 123  gcggcgggagcttcgggtgccgggc 147
            ||||||||||||| |||||||||||
Sbjct: 2216 gcggcgggagcttggggtgccgggc 2192
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 311     cacgccggcgatcagcaccg 330
               ||||||||||||||||||||
Sbjct: 2707445 cacgccggcgatcagcaccg 2707464
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 91      ggccgaggccagaaggggcagcag 114
               ||||||||||||||||||| ||||
Sbjct: 2788190 ggccgaggccagaaggggcggcag 2788213
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>ref|XM_611254.2| PREDICTED: Bos taurus hypothetical LOC508098 (LOC508098), mRNA
          Length = 923

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 665 cgggctccggctcgggctcg 646
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 163     cgggagcgggctccggctcgggct 186
               ||||||| ||||||||||||||||
Sbjct: 1839703 cgggagccggctccggctcgggct 1839680
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>ref|NM_031392.2| Mus musculus WD repeat domain 6 (Wdr6), mRNA
          Length = 4169

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2724 caagggggccagggccgaggccag 2701
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>ref|XM_653577.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1065.2), mRNA
          Length = 1290

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 27  cgggctccggctcgggctcg 8
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>gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, complete sequence
          Length = 191038

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     gccgaggccagaaggggcagcaga 115
              ||||||||||||||||||| ||||
Sbjct: 122869 gccgaggccagaaggggcatcaga 122846
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>ref|NM_015278.3| Homo sapiens SAM and SH3 domain containing 1 (SASH1), mRNA
          Length = 7709

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 539 cgggctccggctcgggctcg 520
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>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0038B22, complete sequence
          Length = 177557

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 187   cgacgagaaccccgacgccatcatctcc 214
             ||||||||||| ||| ||||||||||||
Sbjct: 77071 cgacgagaacctcgaggccatcatctcc 77098
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 379     agcggaccaggcactggtgg 398
               ||||||||||||||||||||
Sbjct: 3853643 agcggaccaggcactggtgg 3853662
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>ref|XM_850346.1| PREDICTED: Canis familiaris similar to eukaryotic translation
           initiation factor 3, subunit 3 gamma, 40kDa (LOC612613),
           mRNA
          Length = 998

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 agaaggggcagcagagccgg 120
           ||||||||||||||||||||
Sbjct: 42  agaaggggcagcagagccgg 23
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>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    cggcgatcagcaccgagggg 335
              ||||||||||||||||||||
Sbjct: 131898 cggcgatcagcaccgagggg 131917
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>ref|XM_815829.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053504153.290) partial mRNA
          Length = 1866

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  cgctcctgcgcgaggccatg 355
            ||||||||||||||||||||
Sbjct: 1571 cgctcctgcgcgaggccatg 1590
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>gb|BC035951.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone IMAGE:4506719),
           complete cds
          Length = 2083

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  caagggggccaaggccgaggccag 102
           ||||||||||| ||||||||||||
Sbjct: 703 caagggggccagggccgaggccag 680
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>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     gccgaggccagaaggggcagcaga 115
              ||||||||||||||||||| ||||
Sbjct: 214947 gccgaggccagaaggggcatcaga 214970
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>gb|BC053993.1| Mus musculus cDNA clone IMAGE:6314898, **** WARNING: chimeric clone
            ****
          Length = 6454

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 5037 caagggggccagggccgaggccag 5014
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>gb|AY351960.1|AY351960S01 Homo sapiens PEPE1 gene, exon 1
          Length = 677

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 539 cgggctccggctcgggctcg 520
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>emb|AL513164.13| Human DNA sequence from clone RP11-400P17 on chromosome 6 Contains the
             5' part of a novel gene, the 5' part of the gene for
             KIAA0790 protein (KIAA0790) and a CpG island, complete
             sequence
          Length = 154288

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   cgggctccggctcgggctcg 188
             ||||||||||||||||||||
Sbjct: 97968 cgggctccggctcgggctcg 97949
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 343     gcgcgaggccatgtcgacgcccgtgctg 370
               |||||||||||||||| |||| ||||||
Sbjct: 2872557 gcgcgaggccatgtcgtcgccagtgctg 2872530
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>ref|XM_964282.1| PREDICTED: Tribolium castaneum similar to CG8639-PA (LOC657847), mRNA
          Length = 3999

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 119  ggcagcggcgggagcttcgggtgc 142
            |||||||||||| |||||||||||
Sbjct: 3494 ggcagcggcgggtgcttcgggtgc 3471
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 163    cgggagcgggctccggctcgggctcgac 190
              ||||||||||||||||||| || |||||
Sbjct: 938406 cgggagcgggctccggctccggttcgac 938379
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>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   cgggctccggctcgggctcg 188
             ||||||||||||||||||||
Sbjct: 88969 cgggctccggctcgggctcg 88988
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>gb|BC054367.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone MGC:62549
            IMAGE:5346943), complete cds
          Length = 4104

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2652 caagggggccagggccgaggccag 2629
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      aagggggccaaggccgaggc 99
               ||||||||||||||||||||
Sbjct: 2353174 aagggggccaaggccgaggc 2353155
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>gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180309

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    tggaggttgaaggacacttc 415
              ||||||||||||||||||||
Sbjct: 146909 tggaggttgaaggacacttc 146928
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     cgggctccggctcgggctcg 188
               ||||||||||||||||||||
Sbjct: 2449373 cgggctccggctcgggctcg 2449354
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>dbj|AK146617.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched
            library, clone:I920035B07 product:WD repeat domain 6,
            full insert sequence
          Length = 4044

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2681 caagggggccagggccgaggccag 2658
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>dbj|AK166265.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length
            enriched library, clone:G830027A05 product:WD repeat
            domain 6, full insert sequence
          Length = 4066

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2702 caagggggccagggccgaggccag 2679
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>dbj|AK163752.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030011J15 product:WD repeat
            domain 6, full insert sequence
          Length = 4019

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2657 caagggggccagggccgaggccag 2634
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>dbj|AK169357.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:I920192C19 product:WD repeat domain 6, full insert
            sequence
          Length = 4088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2725 caagggggccagggccgaggccag 2702
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>dbj|AK165935.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730021L06 product:WD repeat domain 6,
            full insert sequence
          Length = 4059

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2688 caagggggccagggccgaggccag 2665
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>dbj|AK052235.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330012A03 product:WD REPEAT PROTEIN WDR6
            homolog [Mus musculus], full insert sequence
          Length = 4035

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2665 caagggggccagggccgaggccag 2642
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>dbj|AK046119.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230342P20 product:WD repeat
            domain 6, full insert sequence
          Length = 4056

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2692 caagggggccagggccgaggccag 2669
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     cccacgccggcgatcagcac 328
               ||||||||||||||||||||
Sbjct: 3041393 cccacgccggcgatcagcac 3041412
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>dbj|AK079258.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530062C16 product:GABA-A
            RECEPTOR EPSILON-LIKE SUBUNIT homolog [Mus musculus],
            full insert sequence
          Length = 1939

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  cgggctccggctcgggctcg 188
            ||||||||||||||||||||
Sbjct: 1356 cgggctccggctcgggctcg 1337
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>dbj|AK037181.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:A030006O19 product:WD repeat domain 6,
            full insert sequence
          Length = 4063

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2701 caagggggccagggccgaggccag 2678
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>gb|AF348591.1|AF348591 Mus musculus WD repeat protein WDR6 mRNA, complete cds
          Length = 4107

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2720 caagggggccagggccgaggccag 2697
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 187      cgacgagaaccccgacgccatcatctcc 214
                ||||||||||| ||| ||||||||||||
Sbjct: 19900004 cgacgagaacctcgaggccatcatctcc 19900031
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>dbj|AK205565.1| Mus musculus cDNA, clone:Y2G0102B21, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000035223, based on BLAT search
          Length = 137

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  caagggggccaaggccgaggccag 102
           ||||||||||| ||||||||||||
Sbjct: 106 caagggggccagggccgaggccag 83
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 169     cgggctccggctcgggctcgacga 192
               |||||||||| |||||||||||||
Sbjct: 8133044 cgggctccggatcgggctcgacga 8133021
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>dbj|AK025495.1| Homo sapiens cDNA: FLJ21842 fis, clone HEP01849
          Length = 4744

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 539 cgggctccggctcgggctcg 520
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>emb|AJ335985.1|HSA335985 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-NC8RS
          Length = 706

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 282 cgggctccggctcgggctcg 263
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>emb|AJ335962.1|HSA335962 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-0F24RS
          Length = 773

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 282 cgggctccggctcgggctcg 263
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>emb|AJ328720.1|HSA328720 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NJ6R
          Length = 683

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 282 cgggctccggctcgggctcg 263
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>gb|BC050894.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone MGC:63325
            IMAGE:5708880), complete cds
          Length = 4169

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2724 caagggggccagggccgaggccag 2701
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>dbj|AK063232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F06, full
           insert sequence
          Length = 751

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 187 cgacgagaaccccgacgccatcatctcc 214
           ||||||||||| ||| ||||||||||||
Sbjct: 87  cgacgagaacctcgaggccatcatctcc 114
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>tpe|BN000088.1|HSA000088 TPA: TPA_exp: Homo sapiens mRNA for putative adapter and scaffold
           protein (SASH1 gene)
          Length = 7709

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 539 cgggctccggctcgggctcg 520
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>emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-47I22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178484

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    tggaggttgaaggacacttc 415
              ||||||||||||||||||||
Sbjct: 135631 tggaggttgaaggacacttc 135650
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>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208102

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    cgggctccggctcgggctcg 188
              ||||||||||||||||||||
Sbjct: 150766 cgggctccggctcgggctcg 150747
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>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   cgggctccggctcgggctcg 188
             ||||||||||||||||||||
Sbjct: 53543 cgggctccggctcgggctcg 53524
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 187      cgacgagaaccccgacgccatcatctcc 214
                ||||||||||| ||| ||||||||||||
Sbjct: 20184983 cgacgagaacctcgaggccatcatctcc 20185010
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>emb|AJ507735.1|HSA507735 Homo sapiens mRNA for putative adapter and scaffold protein (SASH1
           gene)
          Length = 7240

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 70  cgggctccggctcgggctcg 51
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>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete
             sequence
          Length = 193219

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   cgggctccggctcgggctcg 188
             ||||||||||||||||||||
Sbjct: 36579 cgggctccggctcgggctcg 36598
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>dbj|AB018333.1| Homo sapiens mRNA for KIAA0790 protein, partial cds
          Length = 4469

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cgggctccggctcgggctcg 188
           ||||||||||||||||||||
Sbjct: 282 cgggctccggctcgggctcg 263
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>dbj|AB041854.1| Mus musculus wdp122 mRNA for WD-repeat protein p122, complete cds
          Length = 4156

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 79   caagggggccaaggccgaggccag 102
            ||||||||||| ||||||||||||
Sbjct: 2790 caagggggccagggccgaggccag 2767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,112,892
Number of Sequences: 3902068
Number of extensions: 3112892
Number of successful extensions: 62295
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61140
Number of HSP's gapped (non-prelim): 1139
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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