Clone Name | basd3b05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RPIA_BARQU (Q6FZP1) Ribose-5-phosphate isomerase A (EC 5.3.1.6) ... | 28 | 9.7 |
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>RPIA_BARQU (Q6FZP1) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 234 Score = 27.7 bits (60), Expect = 9.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -2 Query: 68 GGGGEPWREKVVWRGSRGL 12 GGGG WREK+V SR + Sbjct: 97 GGGGALWREKIVAAASRAM 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,991,333 Number of Sequences: 219361 Number of extensions: 129572 Number of successful extensions: 928 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 857 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 926 length of database: 80,573,946 effective HSP length: 0 effective length of database: 80,573,946 effective search space used: 1933774704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)