Clone Name | basd3b03 |
---|---|
Clone Library Name | barley_pub |
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 254 bits (648), Expect(2) = 3e-71 Identities = 122/137 (89%), Positives = 135/137 (98%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LDVHLMIVEP+QR+PDFIKAGADIVSVHCEQ++TIHLHRT++QIKSLGAKAGVVLNPGTP Sbjct: 117 LDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTP 176 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L+AIEYVL++VDLVLIMSVNPGFGGQSFIESQVKKI+DLRK+C E+G+NPWIEVDGGV P Sbjct: 177 LTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGP 236 Query: 410 KNAYKVIEAGANALVAG 460 KNAYKVIEAGANALVAG Sbjct: 237 KNAYKVIEAGANALVAG 253 Score = 33.9 bits (76), Expect(2) = 3e-71 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 3 IGPLIVDALRPVTDLP 50 IGPL+VD+LRP+TDLP Sbjct: 101 IGPLVVDSLRPITDLP 116
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 251 bits (640), Expect(2) = 8e-71 Identities = 124/137 (90%), Positives = 131/137 (95%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LDVHLMIVEPEQR+PDFIKAGADIVSVHCE +TIHLHRTV+QIKSLGAKAGVVLNPGTP Sbjct: 122 LDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTP 181 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LS IEYVL+ VDLVLIMSVNPGFGGQSFIESQVKKI+DLRK+C EKGVNPWIEVDGGV+P Sbjct: 182 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVTP 241 Query: 410 KNAYKVIEAGANALVAG 460 NAYKVIEAGANALVAG Sbjct: 242 ANAYKVIEAGANALVAG 258 Score = 35.4 bits (80), Expect(2) = 8e-71 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 3 IGPLIVDALRPVTDLP 50 IGPL+VDALRPVTDLP Sbjct: 106 IGPLVVDALRPVTDLP 121
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 247 bits (630), Expect(2) = 1e-69 Identities = 122/137 (89%), Positives = 131/137 (95%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LDVHLMIVEPEQR+PDFIKAGADIVSVHCEQ++TIHLHRTV+QIKSLGAKAGVVLNP TP Sbjct: 111 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATP 170 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L+AI+YVL+ VDLVLIMSVNPGFGGQSFIESQVKKIA+LRK EKGVNPWIEVDGGV P Sbjct: 171 LTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRKYVAEKGVNPWIEVDGGVGP 230 Query: 410 KNAYKVIEAGANALVAG 460 KNAYKVIEAGANA+VAG Sbjct: 231 KNAYKVIEAGANAIVAG 247 Score = 35.4 bits (80), Expect(2) = 1e-69 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 3 IGPLIVDALRPVTDLP 50 IGPL+VDALRPVTDLP Sbjct: 95 IGPLVVDALRPVTDLP 110
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 191 bits (486), Expect(2) = 1e-50 Identities = 91/137 (66%), Positives = 111/137 (81%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LDVHLMIVEPE+ + DF KAGADI+SVH E A+ HLHRT+ QI+ LG KAG VLNP TP Sbjct: 64 LDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTP 123 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L +EYVL DL+LIMSVNPGFGGQSFI + KI LR++C+E+G++PWIEVDGG+ P Sbjct: 124 LDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP 183 Query: 410 KNAYKVIEAGANALVAG 460 N ++V+EAGANA+VAG Sbjct: 184 NNTWQVLEAGANAIVAG 200 Score = 27.3 bits (59), Expect(2) = 1e-50 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = +3 Query: 3 IGPLIVDALRPVT 41 IGPLIVDA+RP+T Sbjct: 48 IGPLIVDAIRPLT 60
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 157 bits (398), Expect(2) = 3e-42 Identities = 84/138 (60%), Positives = 103/138 (74%), Gaps = 1/138 (0%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LDVHLMI EP++ IP F KAGADI+SVH E A HLHRT+ IK G KAGVVLNP TP Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADILSVHAE--ACPHLHRTIQLIKEQGVKAGVVLNPHTP 119 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNP-WIEVDGGVS 406 + IE+V + +DLVL+M+VNPGFGGQ FI S + KI +++++ +EKG IEVDGGV+ Sbjct: 120 VQVIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADEKGKKDLLIEVDGGVN 179 Query: 407 PKNAYKVIEAGANALVAG 460 + A VIEAGAN LVAG Sbjct: 180 KETAPLVIEAGANLLVAG 197 Score = 33.1 bits (74), Expect(2) = 3e-42 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = +3 Query: 3 IGPLIVDALRPVTDLP 50 IGPLIV+A+RPVTDLP Sbjct: 46 IGPLIVEAVRPVTDLP 61
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 137 bits (344), Expect = 2e-32 Identities = 67/137 (48%), Positives = 95/137 (69%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ ++ +PDF KAGA +S H E A+ H+ RT+ IK G KAG+V NP TP Sbjct: 65 IDVHLMVKPVDRIVPDFAKAGASYISFHPE--ASEHVDRTIQLIKEHGCKAGLVFNPATP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LS ++YV++ +D++L+MSVNPGFGGQSFI + K+ +RKL ++ G + +EVDGGV Sbjct: 123 LSYLDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGVKV 182 Query: 410 KNAYKVIEAGANALVAG 460 N ++ AGA+ VAG Sbjct: 183 DNIAEIAAAGADMFVAG 199
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 136 bits (342), Expect = 3e-32 Identities = 68/137 (49%), Positives = 94/137 (68%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +D HLMI P++ IP F++AGA+ +SVH E H+HRT+ IK LGAKAGVV+NPGT Sbjct: 62 IDAHLMIENPDKYIPKFVEAGANWISVHIENN--YHIHRTLQLIKELGAKAGVVVNPGTS 119 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LSAIE L D VL+MSVNPGF GQ FIE ++++ L+++ + + IE+DGG+ Sbjct: 120 LSAIEEALYYADYVLLMSVNPGFSGQKFIERSIERLRILKEMRDRINPSCLIEIDGGIKE 179 Query: 410 KNAYKVIEAGANALVAG 460 N +V+ AGA+ +V G Sbjct: 180 NNIAEVVRAGADVVVVG 196
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 134 bits (337), Expect = 1e-31 Identities = 66/137 (48%), Positives = 95/137 (69%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ ++ IPDF KAGA+ ++ H E + H+ R++ I+ G K+G+V NP P Sbjct: 65 IDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIRDCGCKSGLVFNPAMP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LS ++YVL+ VD+VL+MSVNPGFGGQSFI + +KK+ RK+ +E G + +EVDGGV Sbjct: 123 LSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGGVKV 182 Query: 410 KNAYKVIEAGANALVAG 460 N ++ AGA+ VAG Sbjct: 183 DNIAEIAAAGADMFVAG 199
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 132 bits (333), Expect = 3e-31 Identities = 65/137 (47%), Positives = 95/137 (69%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK G KAG+V NP TP Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPATP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LS ++YV++ +D++L+MSVNPGFGGQSFI + K+ ++R+ +E G + +EVDGGV Sbjct: 123 LSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKV 182 Query: 410 KNAYKVIEAGANALVAG 460 N ++ AGA+ VAG Sbjct: 183 NNIGEIAAAGADMFVAG 199
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 132 bits (333), Expect = 3e-31 Identities = 65/137 (47%), Positives = 95/137 (69%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK G KAG+V NP TP Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPATP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LS ++YV++ +D++L+MSVNPGFGGQSFI + K+ ++R+ +E G + +EVDGGV Sbjct: 123 LSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKV 182 Query: 410 KNAYKVIEAGANALVAG 460 N ++ AGA+ VAG Sbjct: 183 NNIGEIAAAGADMFVAG 199
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 132 bits (333), Expect = 3e-31 Identities = 65/137 (47%), Positives = 95/137 (69%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK G KAG+V NP TP Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPATP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LS ++YV++ +D++L+MSVNPGFGGQSFI + K+ ++R+ +E G + +EVDGGV Sbjct: 123 LSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKV 182 Query: 410 KNAYKVIEAGANALVAG 460 N ++ AGA+ VAG Sbjct: 183 NNIGEIAAAGADMFVAG 199
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 132 bits (333), Expect = 3e-31 Identities = 65/137 (47%), Positives = 95/137 (69%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK G KAG+V NP TP Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIKENGCKAGLVFNPATP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 LS ++YV++ +D++L+MSVNPGFGGQSFI + K+ ++R+ +E G + +EVDGGV Sbjct: 123 LSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKV 182 Query: 410 KNAYKVIEAGANALVAG 460 N ++ AGA+ VAG Sbjct: 183 NNIGEIAAAGADMFVAG 199
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 125 bits (313), Expect(2) = 4e-30 Identities = 65/141 (46%), Positives = 92/141 (65%), Gaps = 4/141 (2%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ + IP F KAGA+++S H E A+ H+ RT+ I+ G KAG+VLNP TP Sbjct: 76 IDVHLMVEPVDALIPMFAKAGANLISFHPE--ASRHVDRTIGLIRDHGCKAGLVLNPATP 133 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEK----GVNPWIEVDG 397 LS +++ L+ +DLVL+MSVNPGFGGQ+FI + K+ R + + G W+E+DG Sbjct: 134 LSWLDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGGRPVWLEIDG 193 Query: 398 GVSPKNAYKVIEAGANALVAG 460 GV N ++ AGA+ VAG Sbjct: 194 GVKADNITEIARAGADTFVAG 214 Score = 25.0 bits (53), Expect(2) = 4e-30 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 Query: 3 IGPLIVDALRPVTDLP 50 IGPL+ +A+RP+ +P Sbjct: 60 IGPLVCEAIRPLVSIP 75
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 129 bits (323), Expect = 5e-30 Identities = 64/137 (46%), Positives = 90/137 (65%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ + IP F KAGA ++ H E AT+H+ RT++ IK G KAG+ NP TP Sbjct: 65 IDVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIKENGCKAGLAFNPATP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L+ ++Y+LE +DL+L+MSVNPGFG QSF+ S K+ ++RK+ + + +EVDGGV Sbjct: 123 LNFLDYILEKLDLILLMSVNPGFGNQSFLPSTFNKLREVRKIIDANFSDILLEVDGGVKL 182 Query: 410 KNAYKVIEAGANALVAG 460 N + AGAN V G Sbjct: 183 DNIADIACAGANVFVMG 199
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 127 bits (320), Expect = 1e-29 Identities = 64/137 (46%), Positives = 90/137 (65%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ + IP F +AGAD ++ H E T H+ RT++ IK G KAG+ LNP T Sbjct: 65 IDVHLMVKPVDNLIPQFAEAGADFITFHPESTD--HIDRTLNLIKECGCKAGLALNPATS 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L+ ++YV+E +DL+L+MSVNPGFG QSF+ + K+ ++RK E N +EVDGGV Sbjct: 123 LNFLDYVMEKLDLILLMSVNPGFGNQSFLPTSFNKLREVRKKIELNSSNILLEVDGGVKL 182 Query: 410 KNAYKVIEAGANALVAG 460 +N +V +GAN V G Sbjct: 183 ENISEVAFSGANVFVIG 199
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 123 bits (308), Expect(2) = 2e-29 Identities = 65/141 (46%), Positives = 90/141 (63%), Gaps = 4/141 (2%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM+ + IP F KAGA+I+S H E A+ H+ RT+ I+ G KAG+VLNP TP Sbjct: 76 IDVHLMVEPVDALIPLFAKAGANIISFHPE--ASRHVDRTIGLIRDHGCKAGLVLNPATP 133 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEK----GVNPWIEVDG 397 L +++ L+ +DLVL+MSVNPGFGGQ+FI + K+ R + + G W+E+DG Sbjct: 134 LGWLDHTLDQLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVDAGGRPVWLEIDG 193 Query: 398 GVSPKNAYKVIEAGANALVAG 460 GV N + AGA+ VAG Sbjct: 194 GVKADNIAAIARAGADTFVAG 214 Score = 25.0 bits (53), Expect(2) = 2e-29 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 Query: 3 IGPLIVDALRPVTDLP 50 IGPL+ +A+RP+ +P Sbjct: 60 IGPLVCEAIRPLVSIP 75
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 119 bits (299), Expect(2) = 2e-28 Identities = 68/139 (48%), Positives = 90/139 (64%), Gaps = 4/139 (2%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM + I F +AGAD+++ H E A+ H+HR+V I+ G KAGV LNP +P Sbjct: 65 IDVHLMTRPVDPLIDSFAEAGADMITFHPE--ASDHVHRSVQMIRKRGLKAGVALNPASP 122 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADL----RKLCEEKGVNPWIEVDG 397 LS ++++LE +DLVLIMSVNPGFGGQSFI S + KIA L R+ C VDG Sbjct: 123 LSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALANGRRRACRGD------RVDG 176 Query: 398 GVSPKNAYKVIEAGANALV 454 GV+P +A + GA+ LV Sbjct: 177 GVNPADARALARPGADILV 195 Score = 25.0 bits (53), Expect(2) = 2e-28 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 Query: 3 IGPLIVDALRPVTDLP 50 +GPL+ ALRP T LP Sbjct: 49 VGPLVCAALRPHTSLP 64
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 218 Score = 118 bits (296), Expect = 6e-27 Identities = 59/146 (40%), Positives = 88/146 (60%) Frame = +2 Query: 23 CXXXXXXXXLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKA 202 C DVHLM+ P I DF++AGAD ++ H E A +H HR + I+ G K Sbjct: 56 CLRSKTHLPFDVHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIRGRGVKV 113 Query: 203 GVVLNPGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPW 382 G+ L P TP++A+ VL VDLVL+M+VNPGF GQ I + K++ L ++ E+G + Sbjct: 114 GISLVPSTPVAALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSKVSALVQMRTERGYSYM 173 Query: 383 IEVDGGVSPKNAYKVIEAGANALVAG 460 I VDGG+ + + ++AGA+ +V+G Sbjct: 174 ISVDGGIDCRTLPQALDAGADVIVSG 199
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 118 bits (295), Expect = 8e-27 Identities = 62/137 (45%), Positives = 91/137 (66%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLMI + I + +AGAD+++ H E A H+HRT+ I++ G K+GV +NPGTP Sbjct: 67 MDVHLMISPVDAYIDAYAQAGADVLTAHVE--AGPHIHRTLQAIRAAGMKSGVAINPGTP 124 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 AIE+VL+ D+V +M+VNPGFGGQ +I+ K+ LR + ++ V+ IE+DGG+ P Sbjct: 125 AEAIEHVLDIADVVCVMTVNPGFGGQKYID-MTAKVRKLRAMIGDRPVH--IEIDGGMDP 181 Query: 410 KNAYKVIEAGANALVAG 460 A + AGA+ VAG Sbjct: 182 VTAPLMAAAGADVFVAG 198
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 111 bits (277), Expect = 1e-24 Identities = 57/138 (41%), Positives = 88/138 (63%), Gaps = 1/138 (0%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTAT-IHLHRTVDQIKSLGAKAGVVLNPGT 226 LD HLMI P++ P +++AGA V+ H E A + L R +I++ GA+A + L P T Sbjct: 61 LDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAR---EIRAKGARASMALKPAT 117 Query: 227 PLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVS 406 P+ E +L +D++LIM+V PGFGGQ+F++ + KI R+L ++ G+ W++VDGGVS Sbjct: 118 PVEPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIKKHGLELWLQVDGGVS 177 Query: 407 PKNAYKVIEAGANALVAG 460 + +AGA+ VAG Sbjct: 178 AATIERCADAGADVFVAG 195
>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 110 bits (276), Expect = 1e-24 Identities = 58/137 (42%), Positives = 83/137 (60%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +DVHLM + I F K +I+S H E T + +T+ IKS G K G+ LNP TP Sbjct: 67 IDVHLMTCPVDDLIIKFAKLDVNIISFHPESTNNVE--KTIKLIKSYGCKVGLALNPLTP 124 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L ++ VL+ +DL+L+MSVNPGF GQ FI S + KI +R+L ++ N +EVDGG++ Sbjct: 125 LCVLDNVLDKIDLILLMSVNPGFPGQKFIPSILNKIRIVRELIDKSKKNILLEVDGGINL 184 Query: 410 KNAYKVIEAGANALVAG 460 N +K+ G + V G Sbjct: 185 SNIFKIASFGTDIFVIG 201
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 110 bits (275), Expect = 2e-24 Identities = 58/137 (42%), Positives = 86/137 (62%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LDVHLM+ + F I+S+H E H HR + IKS G G+VLNP T Sbjct: 59 LDVHLMVENASFFVELFAPLNPQIISIHAENEK--HPHRVLQLIKSSGITPGIVLNPHTH 116 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 +I+Y+LESV LVL+MSVNPGFGGQ F++ ++K +++L + + +EVDGGV+ Sbjct: 117 EESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVND 176 Query: 410 KNAYKVIEAGANALVAG 460 KN +++ +AG + +V+G Sbjct: 177 KNIFELQQAGVDVVVSG 193
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 109 bits (272), Expect = 4e-24 Identities = 58/137 (42%), Positives = 86/137 (62%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LDVHLM+ F I+S+H E H HR + IK+LG G+VLNP T Sbjct: 59 LDVHLMVENASFFAELFAPLKPQIISIHAENEK--HPHRVLQLIKNLGITPGIVLNPHTH 116 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 +I+Y+LESV LVL+MSVNPGFGGQ F++ ++K +++L + + +EVDGGV+ Sbjct: 117 EESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVND 176 Query: 410 KNAYKVIEAGANALVAG 460 KN +++ +AG + +V+G Sbjct: 177 KNIFELQQAGVDVVVSG 193
>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)| Length = 231 Score = 104 bits (260), Expect = 1e-22 Identities = 51/137 (37%), Positives = 81/137 (59%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LD HLM+ P+ I +AGAD +++H E T R +D+I+ K G++LNP TP Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPE-TINGQAFRLIDEIRRHDMKVGLILNPETP 118 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 + A++Y + D + +M+V+PGF GQ FI + K+A+L+ E +G+ IEVDG + Sbjct: 119 VEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQ 178 Query: 410 KNAYKVIEAGANALVAG 460 K++ AGA+ + G Sbjct: 179 ATYEKLMAAGADVFIVG 195
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 100 bits (250), Expect = 1e-21 Identities = 58/136 (42%), Positives = 83/136 (61%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 ++VHLM+ + + +F + D ++ H E A R +++IKS+GAK V LNP TP Sbjct: 62 VEVHLMVENVDLFVNEFEEM--DYITFHIE--AVKFPFRIINRIKSIGAKPIVALNPATP 117 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L AIEY+L V VL+M+V PGF GQ FI KKI L+ + E G + I VDGG++ Sbjct: 118 LDAIEYILGDVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTKIFVDGGINV 177 Query: 410 KNAYKVIEAGANALVA 457 + A ++AGA+ LVA Sbjct: 178 ETAPLAVKAGADVLVA 193
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 100 bits (249), Expect = 2e-21 Identities = 54/137 (39%), Positives = 81/137 (59%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +D HLMI P++ P + +AGA V+ H E AT + I++ GAKAG+ + PGTP Sbjct: 61 MDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVAHDIRTAGAKAGIGVKPGTP 118 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L+ +L D +LIMSV PGFGGQ+FI + K+ +RK+ + + +E+DGG++ Sbjct: 119 LNPYLDILPHFDTLLIMSVEPGFGGQAFIPEVLSKVRTVRKMVDAGELTILVEIDGGINA 178 Query: 410 KNAYKVIEAGANALVAG 460 + EAG + VAG Sbjct: 179 DTIEQAAEAGVDCFVAG 195
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 98.6 bits (244), Expect = 7e-21 Identities = 53/137 (38%), Positives = 79/137 (57%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +D HLMI P++ P + +AGA V+ H E AT + I++ GAKAG+ + PGTP Sbjct: 66 MDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTP 123 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L +L D +L+MSV PGFGGQ FI + K+ +RK+ + + +E+DGG++ Sbjct: 124 LEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIND 183 Query: 410 KNAYKVIEAGANALVAG 460 + EAG + VAG Sbjct: 184 DTIEQAAEAGVDCFVAG 200
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 98.6 bits (244), Expect = 7e-21 Identities = 53/137 (38%), Positives = 79/137 (57%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 +D HLMI P++ P + +AGA V+ H E AT + I++ GAKAG+ + PGTP Sbjct: 66 MDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTP 123 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 L +L D +L+MSV PGFGGQ FI + K+ +RK+ + + +E+DGG++ Sbjct: 124 LEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGIND 183 Query: 410 KNAYKVIEAGANALVAG 460 + EAG + VAG Sbjct: 184 DTIEQAAEAGVDCFVAG 200
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 95.1 bits (235), Expect = 8e-20 Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTAT-IHLHRTVDQIKSLGAKAGVVLNPGTP 229 D H+M+ PE+ + DF K GAD + H E T +HL V IKS G KA + PGT Sbjct: 78 DCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSKGIKAACAIKPGTS 134 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 + + + +D+ L+M+V PGFGGQ F+E + K+ LR K + I+VDGG+ Sbjct: 135 VDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLR----AKFPHLNIQVDGGLGK 190 Query: 410 KNAYKVIEAGANALVAG 460 + K +AGAN +VAG Sbjct: 191 ETIPKAAKAGANVIVAG 207
>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 94.0 bits (232), Expect = 2e-19 Identities = 55/138 (39%), Positives = 81/138 (58%), Gaps = 2/138 (1%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 L+VH MI P + + F+KAGAD + VH E A +L +D I+ G +AG+ +P T Sbjct: 66 LEVHAMIYTPFEFVEAFVKAGADRIIVHFE--AAENLKEILDYIRKCGVQAGIAFSPETS 123 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGV--NPWIEVDGGV 403 + I + D++L+MSV PGF GQ FI ++KI +R+ + G + IEVDGG+ Sbjct: 124 IEFISAFIPLCDVILLMSVQPGFCGQKFIPDTIEKIRFVRQAIQTLGKEGSCLIEVDGGI 183 Query: 404 SPKNAYKVIEAGANALVA 457 ++A EAGA+ LVA Sbjct: 184 DEESARACREAGADILVA 201
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 92.8 bits (229), Expect = 4e-19 Identities = 55/140 (39%), Positives = 78/140 (55%), Gaps = 3/140 (2%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 LD HLM+ P + KAGA + H E + + + IK+ G + GV L PGTP Sbjct: 67 LDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRD-NWQELIQSIKAKGMRPGVSLRPGTP 125 Query: 230 LSAIEYVLES---VDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGG 400 + + ++E+ V+LVL+M+V PGFGGQ F+ ++K+ LRK K + IEVDGG Sbjct: 126 VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRK----KYPSLDIEVDGG 181 Query: 401 VSPKNAYKVIEAGANALVAG 460 + P AGAN +VAG Sbjct: 182 LGPSTIDVAASAGANCIVAG 201
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 92.0 bits (227), Expect = 6e-19 Identities = 54/136 (39%), Positives = 76/136 (55%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPL 232 D H+M+ EPE+ + DF KAGAD + H E AT V IK G KA + PGTP+ Sbjct: 81 DCHMMVEEPEKWVADFAKAGADQFTFHYE--ATKDPLSLVKLIKENGIKAACAIKPGTPV 138 Query: 233 SAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPK 412 + + +D+ L+M+V PGFGGQ F+ + K+ LR K + I+VDGG+ + Sbjct: 139 DVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVEALR----TKFPHMNIQVDGGLGKE 194 Query: 413 NAYKVIEAGANALVAG 460 +AGAN +VAG Sbjct: 195 TIGVAAKAGANVIVAG 210
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 91.7 bits (226), Expect = 8e-19 Identities = 51/136 (37%), Positives = 75/136 (55%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPL 232 D+H+M+ +PEQ + AGA+ + H E AT + + I+ G K G+ + PGT + Sbjct: 68 DMHMMVSKPEQWVKPMAVAGANQYAFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSV 125 Query: 233 SAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPK 412 + +D+ L+M+V PGFGGQ F+E + K+ LR IEVDGGV P Sbjct: 126 EYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEVDGGVGPD 181 Query: 413 NAYKVIEAGANALVAG 460 +K EAGAN +V+G Sbjct: 182 TVHKCAEAGANMIVSG 197
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 91.7 bits (226), Expect = 8e-19 Identities = 51/136 (37%), Positives = 75/136 (55%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPL 232 D+H+M+ +PEQ + AGA+ + H E AT + + I+ G K G+ + PGT + Sbjct: 68 DMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSV 125 Query: 233 SAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPK 412 + +D+ L+M+V PGFGGQ F+E + K+ LR IEVDGGV P Sbjct: 126 EYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD----IEVDGGVGPD 181 Query: 413 NAYKVIEAGANALVAG 460 +K EAGAN +V+G Sbjct: 182 TVHKCAEAGANMIVSG 197
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 90.1 bits (222), Expect = 2e-18 Identities = 52/136 (38%), Positives = 77/136 (56%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPL 232 D H+M+ EPE+ + F++ GAD + H E AT + V IKS G +A + P TP+ Sbjct: 76 DCHMMVAEPEKWVDVFVENGADQFTFHYE--ATKNPLELVKLIKSRGIRAACAIKPDTPV 133 Query: 233 SAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPK 412 + + +D+ L+M+V PGFGGQ F+ + K+A LR EK I+VDGG+ + Sbjct: 134 DVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVAALR----EKFPQLDIQVDGGLGKE 189 Query: 413 NAYKVIEAGANALVAG 460 +AGAN +VAG Sbjct: 190 TIPHAAKAGANVIVAG 205
>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-epimerase) Length = 228 Score = 89.7 bits (221), Expect = 3e-18 Identities = 51/136 (37%), Positives = 73/136 (53%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPL 232 D+H+M+ PEQ + AGA+ + H E AT + + I+ G K G+ + PGT + Sbjct: 68 DMHMMVSRPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTTV 125 Query: 233 SAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPK 412 + +D+ L+M+V PGFGGQ F+E + K+ LR IEVDGGV P Sbjct: 126 EYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPTLD----IEVDGGVGPD 181 Query: 413 NAYKVIEAGANALVAG 460 K EAGAN +V+G Sbjct: 182 TVQKCAEAGANMIVSG 197
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 89.4 bits (220), Expect = 4e-18 Identities = 54/136 (39%), Positives = 73/136 (53%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPL 232 D HLM++EPE+ I AGA + H E AT + + G G L P TP+ Sbjct: 68 DCHLMVIEPERYIDQLADAGASLFCFHYE--ATEKHEEIISRAHEKGMLVGCALKPKTPV 125 Query: 233 SAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPK 412 I +E +D+VL+M+V PG GGQSF+ + K+ LRK K +EVDGG+S K Sbjct: 126 EVILPFVEKLDMVLVMTVEPGKGGQSFMPECLPKVEFLRK----KYPTLNVEVDGGLSLK 181 Query: 413 NAYKVIEAGANALVAG 460 +AGAN +VAG Sbjct: 182 TVDAAADAGANVIVAG 197
>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 233 Score = 88.2 bits (217), Expect = 9e-18 Identities = 51/138 (36%), Positives = 81/138 (58%), Gaps = 2/138 (1%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 L+VH MI P + + F+KAGAD + VH E A ++ + I+ G +AGV +P T Sbjct: 71 LEVHAMIYTPFEFVEAFVKAGADRIIVHFE--AAENIKEIISYIQKCGVQAGVAFSPETS 128 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKG--VNPWIEVDGGV 403 + + + D++L+MSV+PGF GQ FI +++I +++ + G + IEVDGG+ Sbjct: 129 IEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGGI 188 Query: 404 SPKNAYKVIEAGANALVA 457 ++A EAGA+ LVA Sbjct: 189 DKESARACREAGADILVA 206
>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 88.2 bits (217), Expect = 9e-18 Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 2/137 (1%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 L+VH MI P + I F+++GAD + VH E A+ + + IK G +AG+ +P T Sbjct: 67 LEVHAMIYNPFEFIESFVRSGADRIIVHFE--ASEDIKELLSYIKKCGVQAGLAFSPDTS 124 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNP--WIEVDGGV 403 + + L D+V++MSV PGF GQSF+ + ++KIA R + G+ IEVDGG+ Sbjct: 125 IEFLPSFLPFCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKDSCLIEVDGGI 184 Query: 404 SPKNAYKVIEAGANALV 454 ++A +AGA+ LV Sbjct: 185 DQQSAPLCRDAGADILV 201
>SGCE_ECOLI (P39362) Protein sgcE (EC 5.1.3.-)| Length = 210 Score = 65.5 bits (158), Expect = 6e-11 Identities = 42/137 (30%), Positives = 67/137 (48%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 L H M+ P++ + + VH E + T+ +I+ GA+AG+V NP TP Sbjct: 61 LSFHFMLARPQRWFNALAEIRPAWIFVHAETLD--YPSETLTEIRHTGARAGLVFNPATP 118 Query: 230 LSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSP 409 + A Y+ +D V++M+ P GQ FI S +KI +R + W DGG++ Sbjct: 119 IDAWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQ--TECW--ADGGITL 174 Query: 410 KNAYKVIEAGANALVAG 460 A ++ AGA +V G Sbjct: 175 AAAQQLAAAGAQHMVIG 191
>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 217 Score = 62.0 bits (149), Expect = 7e-10 Identities = 42/136 (30%), Positives = 65/136 (47%) Frame = +2 Query: 53 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPL 232 DVH+M+ P I +V++H E + + ++ G+ LNP T + Sbjct: 68 DVHMMVESPLDIIMQIDLERVSLVTIHSEVCDKAGV---AEYLRKRNVLFGIALNPETQV 124 Query: 233 SAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDGGVSPK 412 E + S D VLIMSV PGFGGQ F E + K+ ++R+ + G +DGG+ Sbjct: 125 DDAE--MRSADFVLIMSVKPGFGGQKFQEECLAKVEEVRRYGKMVG------IDGGIEMS 176 Query: 413 NAYKVIEAGANALVAG 460 N ++ GA+ V G Sbjct: 177 NIGRI--TGADYAVVG 190
>RPE_MYCPN (P75522) Probable ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 215 Score = 60.1 bits (144), Expect = 3e-09 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 2/139 (1%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGA-DIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGT 226 ++VHLM+ EQ +P ++ A +S H E + + QIK G + G+ T Sbjct: 66 VNVHLMVQALEQILPVYLHHQAVKRISFHVEPFDIPTIKHFIAQIKQAGKQVGLAFKFTT 125 Query: 227 PLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKL-CEEKGVNPWIEVDGGV 403 PL E +++ +D V +MSV PG GGQ+F + + K C IE+DGG+ Sbjct: 126 PLVNYERLVQQLDFVTLMSVPPGKGGQAFNSAVFNNLKQAHKYHCS-------IEIDGGI 178 Query: 404 SPKNAYKVIEAGANALVAG 460 N ++ I+ N +V G Sbjct: 179 KLDNIHQ-IQDDVNFIVMG 196
>RPE_MYCGE (P47358) Probable ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 209 Score = 48.1 bits (113), Expect = 1e-05 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 4/141 (2%) Frame = +2 Query: 50 LDVHLMIVEPEQRIP--DFIKAGADI--VSVHCEQTATIHLHRTVDQIKSLGAKAGVVLN 217 ++VHLM+ EQ IP +F + ++ +S H E + + + +K G + G+ Sbjct: 61 VNVHLMV---EQIIPQINFYLSQPNVKRISFHVEPFSFAKIKELIQLVKENGKEVGLAFK 117 Query: 218 PGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDG 397 T L + ++D + +MSV PG GGQ+F E A L N IE+DG Sbjct: 118 FTTNLQLYQPFFTTIDFITLMSVPPGKGGQAFNE------AVFTNLKIANHYNLKIEIDG 171 Query: 398 GVSPKNAYKVIEAGANALVAG 460 G+ N + I+A + +V G Sbjct: 172 GIKVNNIDQ-IKAFVDFIVMG 191
>PDR5_ARATH (Q9ZUT8) Probable pleiotropic drug resistance protein 5| Length = 1413 Score = 35.0 bits (79), Expect = 0.093 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Frame = +2 Query: 71 VEPEQRIPDFIKAGADI--VSVHCEQTATIHLHRTVDQIKSLGAKAGVV--LNPGTPLSA 238 +E E RI F+K VS +CEQT TV++ A +V +NP T + Sbjct: 880 IEGEIRISGFLKVQETFARVSGYCEQTDIHSPSITVEESLIYSAWLRLVPEINPQTKIRF 939 Query: 239 IEYVLESVDLVLIMSVNPGFGGQSFIESQVKK 334 ++ VLE+++L I G G S + ++ +K Sbjct: 940 VKQVLETIELEEIKDALVGVAGVSGLSTEQRK 971
>THIC_METMP (P61428) Thiamine biosynthesis protein thiC| Length = 426 Score = 33.5 bits (75), Expect = 0.27 Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 22/126 (17%) Frame = +2 Query: 104 KAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTPLSA--------------I 241 K G D +++HC T +TV + + K GVV G L+A Sbjct: 153 KEGVDFMTLHCGITK-----QTVSALNNDPRKMGVVSRGGAFLTAYIMYHDKENPLYKEF 207 Query: 242 EYVLE-----SVDLVLIMSVNPGFGGQSFIESQVKKIADLRKL---CEEKGVNPWIEVDG 397 +Y+LE V L L + PG + +Q++++ L +L C EKGV +E G Sbjct: 208 DYLLELLKEHDVTLSLGDGMRPGCLQDNTDRAQIQELITLGELVDKCREKGVQVMVEGPG 267 Query: 398 GVSPKN 415 V N Sbjct: 268 HVPYNN 273
>HPS_METAM (Q48907) 3-hexulose-6-phosphate synthase (EC 4.1.2.-) (HPS)| (D-arabino-3-hexulose-6-phosphate formaldehyde lyase) Length = 208 Score = 32.7 bits (73), Expect = 0.46 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Frame = +2 Query: 98 FIKAGADIVSV-HCEQTATIHLHRTVDQIKSLGAKAGV-VLNPGTPLSAIEYVLESVDLV 271 F KAGADI +V TI +D G KA + ++N G + + V + Sbjct: 73 FYKAGADITTVLGVADLGTIK--GVIDAANKYGKKAQIDLINVGDKAARTKEVAKLG--A 128 Query: 272 LIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVD--GGVSPKNAYKVIEAGAN 445 I+ V+ G Q+ ++ +A + G+N +EV GGV P +V +AGA Sbjct: 129 HIIGVHTGLDQQAAGQTPFADLATVT------GLNLGLEVSVAGGVKPATVAQVKDAGAT 182 Query: 446 ALVAG 460 +VAG Sbjct: 183 IIVAG 187
>FLGK_BACSU (P39810) Flagellar hook-associated protein 1 (HAP1)| Length = 507 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/84 (28%), Positives = 39/84 (46%) Frame = -3 Query: 265 INRFKYIFYGTEWSPRVQNNSSLCS*TFNLVDCSVQMDGCCLLTVDANNISTCLDKIWNS 86 + R + IF ++ R+QNNS+ T QM+G L D + +++ L+ WNS Sbjct: 73 VERIRDIFLDYQY--RLQNNSAGYYDT--KAKALSQMEGV-LNETDDSGLNSVLNSFWNS 127 Query: 85 LLRFHNHQMHIQGRSVTGRRASTI 14 L N+ RSV R+ + Sbjct: 128 LQELSNNTNEESARSVVARKGQAV 151
>PCRB_METTH (O26652) Protein pcrB homolog| Length = 248 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 10/104 (9%) Frame = +2 Query: 56 VHLMIVEPEQRIPD--------FIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVV 211 +HL +++PE++ P+ I+ G D + + T + L T ++ ++ Sbjct: 19 IHLTLIDPEEQTPEEAVEIARAAIRGGTDGIMLGGSTTDSSELDNTARALRE-NIDVPII 77 Query: 212 LNPGTPLSAIEYVLESVDLVLIMSVNPGF--GGQSFIESQVKKI 337 L PG Y + L+ S NP + G Q+ + VKK+ Sbjct: 78 LFPGNTTGVSRYADAIFFMSLLNSTNPYWIIGAQALGAATVKKM 121
>ARNC_YERPS (Q93PD9) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) Length = 327 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G HS + A F+Q+S L +TLD L P Sbjct: 74 LNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPP 107
>ARNC_YERPE (Q8ZDX7) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 327 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G HS + A F+Q+S L +TLD L P Sbjct: 74 LNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPP 107
>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 908 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = +2 Query: 50 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNPGTP 229 + V L ++P + F+ ADI + HC QT H+H KA +VL+ G P Sbjct: 74 IGVDLNAIKPLPHVTTFV---ADITTPHCRQTLRQHMH---------DWKADLVLHDGAP 121
>TRPA_AERPE (Q9Y8T3) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 252 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/102 (21%), Positives = 51/102 (50%) Frame = +2 Query: 155 HLHRTVDQIKSLGAKAGVVLNPGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQVKK 334 H+ V++ + LG + + +P P ++ L++ + + P G + + + ++ Sbjct: 124 HVEWYVEESRRLGMEPSLFASPKFPHRWLDRYRRLDPLLIYLGLQPATGVKLPL-AFLRN 182 Query: 335 IADLRKLCEEKGVNPWIEVDGGVSPKNAYKVIEAGANALVAG 460 + RK+ + + + SP++A +V+EAGA+A+V G Sbjct: 183 VKTARKIVGQVYMLAGFSIK---SPEDALRVLEAGADAVVVG 221
>MURG_BACHD (Q9K9T0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 363 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +2 Query: 143 TATIHLHRTVDQIKSLGAKAGVVLNPGTPLSAIEYVLESVDLVL 274 T T+H R +Q+KS+G V++ P + + VL +VDL++ Sbjct: 223 TGTVHYERVQEQMKSIGQPENVIVQPF--IHNMPDVLSAVDLIV 264
>PYRD_PYRHO (O59185) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 303 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +2 Query: 215 NPGTPLSAIEYVLESVDLVLIMSVNPGFGGQ----SFIESQVKKIADLRKLCEEKGVNPW 382 NPG E++ E D +I+S+ FGG +F+ +++ +AD +L Sbjct: 77 NPGWEAFLNEFIDERFDFPVIVSI---FGGTPEEFAFLAEKLEPVADAFELNLSCPHAKG 133 Query: 383 IEVDGGVSPKNAYKVIEA 436 ++ G PKN Y+V++A Sbjct: 134 YGMEIGQDPKNVYEVVKA 151
>Y047_MYCPN (P75067) Hypothetical protein MG037 homolog (D09_orf451)| Length = 451 Score = 30.0 bits (66), Expect = 3.0 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Frame = +2 Query: 155 HLHRTVDQ--IKSLGAKAGVVLNPGTPLSAIEYVLESVDLVLIMSVNPGFGGQSFIESQV 328 H TV+Q K L K G+V G IEY+LE + S N FG S + Sbjct: 342 HFGSTVNQKGYKVLNQKLGIVYGDGITYERIEYILEQLKQRGFCSSNIVFGVGSTTYQNL 401 Query: 329 KK--IADLRKLCEEKGVNPWIEV 391 + + + KL K N W +V Sbjct: 402 NRDTLGFVYKLTAIKKGNTWHDV 424
>ALF1_XYLFT (Q87AI0) Probable fructose-bisphosphate aldolase class 1 (EC| 4.1.2.13) (Fructose-biphosphate aldolase class I) (FBP aldolase) Length = 334 Score = 29.6 bits (65), Expect = 3.9 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +2 Query: 314 IESQVKKIADLRKLCEEKGVNPWIE----VDGGVSPKNAYKVIEAGANAL 451 I++ V +A LC+E+G+ P +E +DG AY+V EA +L Sbjct: 153 IDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSL 202
>ALF1_XYLFA (Q9PF52) Probable fructose-bisphosphate aldolase class 1 (EC| 4.1.2.13) (Fructose-biphosphate aldolase class I) (FBP aldolase) Length = 334 Score = 29.6 bits (65), Expect = 3.9 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +2 Query: 314 IESQVKKIADLRKLCEEKGVNPWIE----VDGGVSPKNAYKVIEAGANAL 451 I++ V +A LC+E+G+ P +E +DG AY+V EA +L Sbjct: 153 IDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSL 202
>ARNC_SHIFL (Q7UC63) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 322 Score = 29.6 bits (65), Expect = 3.9 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 IN N G HS + A FS ++ L +TLD L P Sbjct: 74 INRNYGQHSAIMAGFSHVTGDLIITLDADLQNPP 107
>ALCR_EMENI (P21228) Regulatory protein alcR| Length = 821 Score = 29.6 bits (65), Expect = 3.9 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 419 RHFWD*LHHQPQSRGSLPSLRIIFSNQQFSLLDS 318 R+ W+ H Q +PS R+IF+N FSL S Sbjct: 363 RNAWNEARHALQHTTGIPSFRVIFANIIFSLTQS 396
>ARNC_PHOLL (Q7N3Q6) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) Length = 325 Score = 29.6 bits (65), Expect = 3.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G HS + A F+Q++ L +TLD L P Sbjct: 73 LNRNYGQHSAIMAGFNQVNGDLIITLDADLQNPP 106
>FAEHP_ARCFU (O28964) Fae/hps bifunctional enzyme [Includes:| Formaldehyde-activating enzyme (EC 4.3.-.-) (Fae); 3-hexulose-6-phosphate synthase (EC 4.1.2.-) (HPS) (D-arabino-3-hexulose-6-phosphate formaldehyde lyase)] Length = 394 Score = 29.3 bits (64), Expect = 5.1 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +2 Query: 383 IEVDGGVSPKNAYKVIEAGANALVAG 460 + V GG+ P+N +VI AGA+ +V G Sbjct: 336 VAVAGGIRPENVEEVIAAGADIIVVG 361
>ALF1_XANCP (Q8P5Z7) Probable fructose-bisphosphate aldolase class 1 (EC| 4.1.2.13) (Fructose-biphosphate aldolase class I) (FBP aldolase) Length = 334 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +2 Query: 275 IMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIE----VDGGVSPKNAYKVIEAGA 442 ++++ + IE+ +A LC+E+G+ P +E +DG + Y+V EA Sbjct: 140 VINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEPEVIMDGDHDIETCYEVTEATL 199 Query: 443 NAL 451 +L Sbjct: 200 RSL 202
>ARNC_SALTY (O52324) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) Length = 327 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G H+ + A FS +S L +TLD L P Sbjct: 74 LNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPP 107
>ARNC_SALTI (Q8Z541) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) Length = 327 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G H+ + A FS +S L +TLD L P Sbjct: 74 LNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPP 107
>ARNC_SALPA (Q5PNA5) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 327 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G H+ + A FS +S L +TLD L P Sbjct: 74 LNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPP 107
>ARNC_SALCH (Q57M56) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 327 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G H+ + A FS +S L +TLD L P Sbjct: 74 LNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPP 107
>ARNC_ECOLI (P77757) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) (Polymyxin resistance protein pmrF) Length = 322 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G HS + A FS ++ L +TLD L P Sbjct: 74 LNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPP 107
>ARNC_ECOL6 (Q8FFM2) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 322 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G HS + A FS ++ L +TLD L P Sbjct: 74 LNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPP 107
>ARNC_ECO57 (Q8XDZ5) Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose| transferase (EC 2.7.8.-) (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN transferase) Length = 322 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 394 INLNPGVHSLLFA*FSQISNFLYLTLDKALPTKP 293 +N N G HS + A FS ++ L +TLD L P Sbjct: 74 LNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPP 107
>TUAD_BACSU (O32271) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc| dehydrogenase) (UDP-GlcDH) (UDPGDH) (Teichuronic acid biosynthesis protein tuaD) Length = 461 Score = 28.5 bits (62), Expect = 8.7 Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 4/120 (3%) Frame = +2 Query: 92 PDFIKAGADIVSVHCEQTATIHLHRTVDQIKSLGAKAGVVLNP-GTPLSA--IEYVLESV 262 P+F++ G+ I T+++ R V I S KA ++ P A I+ LES Sbjct: 151 PEFLREGSAIHD-------TMNMERAV--IGSTSHKAAAIIEELHQPFHAPVIKTNLESA 201 Query: 263 DLVLIMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIEVDG-GVSPKNAYKVIEAG 439 +++ + +F+ +++ I D+ +CE G + DG G+ + K ++AG Sbjct: 202 EMIK-------YAANAFLATKISFINDIANICERVGADVSKVADGVGLDSRIGRKFLKAG 254
>ALF1_XANAC (Q8PHB5) Probable fructose-bisphosphate aldolase class 1 (EC| 4.1.2.13) (Fructose-biphosphate aldolase class I) (FBP aldolase) Length = 334 Score = 28.5 bits (62), Expect = 8.7 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +2 Query: 275 IMSVNPGFGGQSFIESQVKKIADLRKLCEEKGVNPWIE----VDGGVSPKNAYKVIEAGA 442 ++++ + IE+ +A LC+E+G+ P +E +DG + Y+V EA Sbjct: 140 VINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATL 199 Query: 443 NAL 451 +L Sbjct: 200 RSL 202
>Y153_MYCPN (P75033) Hypothetical ATP-dependent helicase MG140 homolog (EC| 3.6.1.-) (E07_orf1113) Length = 1113 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = -3 Query: 433 FNDLVGIFGTDSTI--NLNPGVHSLLFA*FSQISNFLYLTLDKALP 302 FN+L IFG TI N+N G +S F + + +L + + ALP Sbjct: 1011 FNELELIFGEQFTIKRNVNEGAYSFSFVFYFNENPYLAVDFNPALP 1056
>DEOC_ENTFA (Q839J1) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 220 Score = 28.5 bits (62), Expect = 8.7 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = +2 Query: 332 KIADLRKLCEEKGVNPWIEVDGGV-SPKNAYKVIEAGANALVA 457 K+AD+R + E G + ++ GGV + + A +IEAGA + A Sbjct: 163 KVADIRLMRETVGPDMGVKASGGVHNAEEALAMIEAGATRIGA 205
>CARB_PYRFU (Q8U085) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1056 Score = 28.5 bits (62), Expect = 8.7 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 15/81 (18%) Frame = +2 Query: 197 KAGVVLNPG----TPLSAIEYVLESVDLVLIMSVNPGFGGQ-SFIESQVKKI-------- 337 K G+ + P TP AIE + ES+ +I+ V+ GG+ SFI ++ Sbjct: 136 KVGLPVPPSDAAKTPEEAIE-IAESIGFPVIVRVSFNLGGRGSFIARSREEFEKYIIRAF 194 Query: 338 --ADLRKLCEEKGVNPWIEVD 394 +++RK+ EK +N W E++ Sbjct: 195 AQSEIRKVLVEKYLNGWKEIE 215
>FAEHP_METST (Q2NE86) Fae/hps bifunctional enzyme [Includes:| Formaldehyde-activating enzyme (EC 4.3.-.-) (Fae); 3-hexulose-6-phosphate synthase (EC 4.1.2.-) (HPS) (D-arabino-3-hexulose-6-phosphate formaldehyde lyase)] Length = 406 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +2 Query: 317 ESQVKKIADLRKLCEEKGVNPWIEVDGGVSPKNAYKVIEAGANALVAG 460 +S+ I D++ ++G+ I V GGV+P+ + GAN ++AG Sbjct: 325 QSEWGNIKDIKSKLGKRGL---IAVAGGVTPEKVDTALANGANIIIAG 369
>MS4A5_HUMAN (Q9H3V2) Membrane-spanning 4-domains subfamily A member 5| (Testis-expressed transmembrane 4 protein) (CD20 antigen-like 2) Length = 200 Score = 28.5 bits (62), Expect = 8.7 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = +2 Query: 98 FIKAGADIVSVHCEQTAT-IHLHRTVDQIKSLGAKAGVVL 214 FI +GA +++V + T T I L R ++ + +LGA AG++L Sbjct: 95 FINSGAFLIAVKRKTTETLIILSRIMNFLSALGAIAGIIL 134 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,729,882 Number of Sequences: 219361 Number of extensions: 1417756 Number of successful extensions: 4371 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 4211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4313 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)