ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3b03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1340 Score = 500 bits (252), Expect = e-138 Identities = 400/448 (89%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctgatgattgtgg 74 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 389 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctgatgattgtgg 448 Query: 75 aacctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccact 134 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 449 aacctgagcaacgagttccagattttatcaaggcaggtgctgatattgttagcgttcact 508 Query: 135 gtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggag 194 |||||||| | ||||||||||||| |||||||||||| | ||||| |||||||| |||| Sbjct: 509 gtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatcaaaagtcttggag 568 Query: 195 caaaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttg 254 |||||||||||||||||||||| |||| || || |||| ||| ||||| |||||||||| Sbjct: 569 caaaggctggagttgttttgaatcctgcaacccctctcactgcgatagattatgtacttg 628 Query: 255 aatctgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagcttta 314 | ||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 629 atgttgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagcttta 688 Query: 315 tcgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtga 374 | || || ||||| ||||| ||||| || ||||||| |||||| | |||||||||||| | Sbjct: 689 ttgaaagccaagtgaagaagattgcagagttgagaagattatgtgcagagaagggagtaa 748 Query: 375 acccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaag 434 |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 749 acccttggattgaggttgatggtggagttggtcccaaaaacgcctacaaggtcattgaag 808 Query: 435 ctggcgcgaatgctcttgttgctggttc 462 |||| || || || ||||||||||||| Sbjct: 809 ctggggccaacgccattgttgctggttc 836
>dbj|AK099215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084F18, full insert sequence Length = 1122 Score = 500 bits (252), Expect = e-138 Identities = 400/448 (89%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctgatgattgtgg 74 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 345 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctgatgattgtgg 404 Query: 75 aacctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccact 134 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 405 aacctgagcaacgagttccagattttatcaaggcaggtgctgatattgttagcgttcact 464 Query: 135 gtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggag 194 |||||||| | ||||||||||||| |||||||||||| | ||||| |||||||| |||| Sbjct: 465 gtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatcaaaagtcttggag 524 Query: 195 caaaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttg 254 |||||||||||||||||||||| |||| || || |||| ||| ||||| |||||||||| Sbjct: 525 caaaggctggagttgttttgaatcctgcaacccctctcactgcgatagattatgtacttg 584 Query: 255 aatctgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagcttta 314 | ||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 585 atgttgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagcttta 644 Query: 315 tcgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtga 374 | || || ||||| ||||| ||||| || ||||||| |||||| | |||||||||||| | Sbjct: 645 ttgaaagccaagtgaagaagattgcagagttgagaagattatgtgcagagaagggagtaa 704 Query: 375 acccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaag 434 |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 705 acccttggattgaggttgatggtggagttggtcccaaaaacgcctacaaggtcattgaag 764 Query: 435 ctggcgcgaatgctcttgttgctggttc 462 |||| || || || ||||||||||||| Sbjct: 765 ctggggccaacgccattgttgctggttc 792
>dbj|AK066306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061C21, full insert sequence Length = 1276 Score = 500 bits (252), Expect = e-138 Identities = 400/448 (89%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctgatgattgtgg 74 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 378 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctgatgattgtgg 437 Query: 75 aacctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccact 134 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 438 aacctgagcaacgagttccagattttatcaaggcaggtgctgatattgttagcgttcact 497 Query: 135 gtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggag 194 |||||||| | ||||||||||||| |||||||||||| | ||||| |||||||| |||| Sbjct: 498 gtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatcaaaagtcttggag 557 Query: 195 caaaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttg 254 |||||||||||||||||||||| |||| || || |||| ||| ||||| |||||||||| Sbjct: 558 caaaggctggagttgttttgaatcctgcaacccctctcactgcgatagattatgtacttg 617 Query: 255 aatctgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagcttta 314 | ||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 618 atgttgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagcttta 677 Query: 315 tcgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtga 374 | || || ||||| ||||| ||||| || ||||||| |||||| | |||||||||||| | Sbjct: 678 ttgaaagccaagtgaagaagattgcagagttgagaagattatgtgcagagaagggagtaa 737 Query: 375 acccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaag 434 |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 738 acccttggattgaggttgatggtggagttggtcccaaaaacgcctacaaggtcattgaag 797 Query: 435 ctggcgcgaatgctcttgttgctggttc 462 |||| || || || ||||||||||||| Sbjct: 798 ctggggccaacgccattgttgctggttc 825
>dbj|AK061772.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C12, full insert sequence Length = 1113 Score = 500 bits (252), Expect = e-138 Identities = 400/448 (89%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctgatgattgtgg 74 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 361 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctgatgattgtgg 420 Query: 75 aacctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccact 134 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 421 aacctgagcaacgagttccagattttatcaaggcaggtgctgatattgttagcgttcact 480 Query: 135 gtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggag 194 |||||||| | ||||||||||||| |||||||||||| | ||||| |||||||| |||| Sbjct: 481 gtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatcaaaagtcttggag 540 Query: 195 caaaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttg 254 |||||||||||||||||||||| |||| || || |||| ||| ||||| |||||||||| Sbjct: 541 caaaggctggagttgttttgaatcctgcaacccctctcactgcgatagattatgtacttg 600 Query: 255 aatctgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagcttta 314 | ||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 601 atgttgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagcttta 660 Query: 315 tcgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtga 374 | || || ||||| ||||| ||||| || ||||||| |||||| | |||||||||||| | Sbjct: 661 ttgaaagccaagtgaagaagattgcagagttgagaagattatgtgcagagaagggagtaa 720 Query: 375 acccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaag 434 |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 721 acccttggattgaggttgatggtggagttggtcccaaaaacgcctacaaggtcattgaag 780 Query: 435 ctggcgcgaatgctcttgttgctggttc 462 |||| || || || ||||||||||||| Sbjct: 781 ctggggccaacgccattgttgctggttc 808
>gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 Score = 500 bits (252), Expect = e-138 Identities = 400/448 (89%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 1 caattggaccattaattgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgc 59 |||||||||| || |||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 542 caattggacccttggttgttgatgctctgcgtccagtgactgatcttccgttggatgtac 601 Query: 60 atctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgata 119 ||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 602 atctgatgattgtggaacctgagcagcgagtccctgattttatcaaggcaggtgctgata 661 Query: 120 ttgttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtcgaccaga 179 ||||||| ||||||||||| || ||| | ||||||||| |||||||||||||| | |||| Sbjct: 662 ttgttagtgtccactgtgaacagacatcgaccatccatttgcaccgaacagtcaatcaga 721 Query: 180 ttaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactcagtgcca 239 |||||||||||||||||||||| |||||||||||||| || | ||||||||||| ||| | Sbjct: 722 ttaaaagtctaggagcaaaggcaggagttgttttgaatccagcgactccactcactgcaa 781 Query: 240 tagaatatgtacttgaatctgttgatctggtattgattatgtcagtcaatcctgggtttg 299 | || || || ||||| |||||| ||||| |||||||||| || ||||||||||||| Sbjct: 782 ttgattacgttcttgatgttgttgacctggtgctgattatgtctgtgaatcctgggtttg 841 Query: 300 gtgggcagagctttatcgagagtcaagtaaagaaaattgctgatttgagaaaattatgcg 359 |||| ||||||||||||||||||||||||||||||||||| || |||||| ||||| | Sbjct: 842 gtggccagagctttatcgagagtcaagtaaagaaaattgcagaactgagaaggttatgtg 901 Query: 360 aagagaagggagtgaacccctggattgaggttgatggtggagtcagtcccaaaaatgcct 419 ||||||||||||||||||||||||||||||||||||||| || |||| |||||||||| Sbjct: 902 cagagaagggagtgaacccctggattgaggttgatggtggtgttggtccgaaaaatgcct 961 Query: 420 acaaggtcattgaagctggcgcgaatgc 447 ||||||| |||||||||||||| ||||| Sbjct: 962 acaaggttattgaagctggcgcaaatgc 989
>gb|AF047444.1|AF047444 Oryza sativa ribulose-5-phosphate-3-epimerase (RPE) mRNA, complete cds Length = 1050 Score = 470 bits (237), Expect = e-129 Identities = 399/449 (88%), Gaps = 3/449 (0%) Strand = Plus / Plus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctgatgattgtgg 74 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 389 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctgatgattgtgg 448 Query: 75 aacctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccact 134 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 449 aacctgagcaacgagttccagattttatcaaggcaggtgctgatattgttagcgttcact 508 Query: 135 gtgagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggag 194 |||||||| | ||||||||||||| |||||||||||| | ||||| |||||||| |||| Sbjct: 509 gtgagcaatcgtcaaccatccatctacaccgaacagtcaatcagatcaaaagtcttggag 568 Query: 195 caaaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttg 254 |||||||||||||||||||||| |||| || || |||| ||| ||||| |||||||||| Sbjct: 569 caaaggctggagttgttttgaatcctgcaacccctctcactgcgatagattatgtacttg 628 Query: 255 aatctgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagcttta 314 | ||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 629 atgttgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagcttta 688 Query: 315 tcgagagtcaagtaaagaaaattgctgatttgagaaaattatgcga-agagaagggagtg 373 | || || ||||| ||||| ||||| || |||||||| | ||| | |||||||||||| Sbjct: 689 ttgaaagccaagtgaagaagattgcagagttgagaaagt-atgtggcagagaagggagta 747 Query: 374 aacccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaa 433 ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 748 aacccttggattgaggttgatggtggagttggtcccaaaaacgcctacaaggtcattgaa 807 Query: 434 gctggcgcgaatgctcttgttgctggttc 462 ||||| || || || ||||||||||||| Sbjct: 808 gctggggccaacgccattgttgctggttc 836
>gb|AF015274.1|AF015274 Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1259 Score = 204 bits (103), Expect = 2e-49 Identities = 364/447 (81%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 424 gttgatgctttgcggcctgtgacagatcttcctttggatgttcatctgatgatagtggaa 483 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| ||||||||||| || || ||| Sbjct: 484 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgttagtgtacattgt 543 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 544 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 603 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 604 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 662 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 663 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 722 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 723 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 782 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 783 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 842 Query: 436 tggcgcgaatgctcttgttgctggttc 462 ||| || |||||||| || |||||||| Sbjct: 843 tggagcaaatgctctagtggctggttc 869
>emb|Z50098.1|STPPEPIMR S.tuberosum mRNA for pentose-5-phosphate-3-epimerase Length = 1055 Score = 194 bits (98), Expect = 2e-46 Identities = 323/398 (81%) Strand = Plus / Plus Query: 50 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 109 ||||||||||||||||||||||| |||||||| ||| || | || || || || || ||| Sbjct: 351 ttggatgtgcatctgatgattgtcgaacctgaccagagagtacctgacttcataaaagca 410 Query: 110 ggtgctgatattgttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaaca 169 |||||||||||||| || || |||||||||||| | | || ||||| |||| || ||| Sbjct: 411 ggtgctgatattgtcagtgttcactgtgagcaatcttctacgatccacttgcatcgtaca 470 Query: 170 gtcgaccagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactcca 229 | | |||||||||||| | |||||||| ||||| ||||| | || ||||| || || Sbjct: 471 ataaatcagattaaaagtttgggagcaaaagctggggttgtcctcaatcctggaacccct 530 Query: 230 ctcagtgccatagaatatgtacttgaatctgttgatctggtattgattatgtcagtcaat 289 | | || || |||||||| ||||| ||||||||||||| ||||||||||| || || Sbjct: 531 ttaaccgcaattgaatatgtccttgatgctgttgatctggtgttgattatgtctgtaaac 590 Query: 290 cctgggtttggtgggcagagctttatcgagagtcaagtaaagaaaattgctgatttgaga 349 ||||| ||||| || |||||||| || |||||||| || |||||||| | || |||||| Sbjct: 591 cctggatttgggggacagagcttcattgagagtcaggtcaagaaaatctcggacttgaga 650 Query: 350 aaattatgcgaagagaagggagtgaacccctggattgaggttgatggtggagtcagtccc 409 ||| | |||| |||| |||| | ||||| |||||||| |||||||||||||| ||||| Sbjct: 651 aaaatctgcgctgagaggggattaaacccttggattgaagttgatggtggagttggtccc 710 Query: 410 aaaaatgcctacaaggtcattgaagctggcgcgaatgc 447 |||||||| |||||||||||||||||||| || ||||| Sbjct: 711 aaaaatgcttacaaggtcattgaagctggagccaatgc 748
>ref|NM_125534.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.2 mRNA, complete cds Length = 1271 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 457 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 516 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 517 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 576 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 577 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 636 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 637 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 695 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 696 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 755 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 756 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 815 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 816 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 875 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 876 tggagcaaatgctctagtggctgg 899
>ref|NM_180909.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.1 mRNA, complete cds Length = 1408 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 588 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 647 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 648 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 707 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 708 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 767 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 768 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 826 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 827 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 886 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 887 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 946 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 947 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 1006 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 1007 tggagcaaatgctctagtggctgg 1030
>gb|AY091381.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 877 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 319 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 378 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 379 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 438 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 439 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 498 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 499 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 557 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 558 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 617 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 618 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 677 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 678 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 737 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 738 tggagcaaatgctctagtggctgg 761
>gb|AY045855.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 1280 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 451 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 510 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 511 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 570 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 571 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 630 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 631 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 689 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 690 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 749 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 750 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 809 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 810 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 869 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 870 tggagcaaatgctctagtggctgg 893
>emb|BX830111.1|CNS0A1DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 548 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 607 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 608 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 667 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 668 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 727 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 728 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 786 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 787 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 846 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 847 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 906 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 907 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 966 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 967 tggagcaaatgctctagtggctgg 990
>emb|BX832763.1|CNS0A101 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 559 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 618 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 619 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 678 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 679 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 738 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 739 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 797 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 798 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 857 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 858 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 917 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 918 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 977 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 978 tggagcaaatgctctagtggctgg 1001
>emb|BX832544.1|CNS0A11A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 560 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 619 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||| | |||||||| || || || ||| Sbjct: 620 cccgagcagagagtaccggatttcatcaaagcaggtacagatattgtcagtgtacattgt 679 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 680 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 739 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 740 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 798 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 799 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 858 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 859 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 918 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||||||||| || Sbjct: 919 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggtcattgaggc 978 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 979 tggagcaaatgctctagtggctgg 1002
>emb|BX832214.1|CNS0A123 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 190 bits (96), Expect = 3e-45 Identities = 360/444 (81%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 588 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 647 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 648 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 707 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 708 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 767 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 768 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 826 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 827 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 886 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 887 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 946 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| |||||||| ||||||||||| |||| ||| ||||| |||||||| ||||| || Sbjct: 947 cccatggattgaagttgatggtggtgtcactccagcgaatgcgtacaaggttattgaggc 1006 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 1007 tggagcaaatgctctagtggctgg 1030
>gb|BT014306.1| Lycopersicon esculentum clone 133557F, mRNA sequence Length = 1257 Score = 184 bits (93), Expect = 2e-43 Identities = 312/385 (81%) Strand = Plus / Plus Query: 51 tggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggcag 110 |||||||||||||||||||||| |||||||| ||| || | || || || || || |||| Sbjct: 498 tggatgtgcatctgatgattgtcgaacctgaccagagagtacctgacttcataaaagcag 557 Query: 111 gtgctgatattgttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacag 170 ||||||||||||| || || || ||||||||| | | || ||||| |||| || ||| Sbjct: 558 gtgctgatattgtcagtgttcattgtgagcaatcttctacaatccacttgcatcgtacaa 617 Query: 171 tcgaccagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccac 230 | |||||||||||||| | ||||| || ||||| ||||| | || ||||| || || Sbjct: 618 taaaccagattaaaagtttgggagctaaagctggggttgtcctcaatcctggaacccctt 677 Query: 231 tcagtgccatagaatatgtacttgaatctgttgatctggtattgattatgtcagtcaatc 290 | | || || |||||||| ||||| ||||||||||||| |||||||||| || || | Sbjct: 678 taaccgcaattgaatatgtccttgatgctgttgatctggtgctgattatgtctgtaaacc 737 Query: 291 ctgggtttggtgggcagagctttatcgagagtcaagtaaagaaaattgctgatttgagaa 350 |||| ||||| || |||||||| || |||||||| || |||||||| | || ||||||| Sbjct: 738 ctggatttgggggacagagcttcattgagagtcaggtcaagaaaatctcagacttgagaa 797 Query: 351 aattatgcgaagagaagggagtgaacccctggattgaggttgatggtggagtcagtccca 410 || |||| | ||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 798 aaatatgtgctgagaagggagtaaacccttggattgaagttgatggtggagttggtccca 857 Query: 411 aaaatgcctacaaggtcattgaagc 435 ||||||| ||||||||||||||||| Sbjct: 858 aaaatgcttacaaggtcattgaagc 882
>emb|BX829553.1|CNS0A1DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1311 Score = 174 bits (88), Expect = 2e-40 Identities = 358/444 (80%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 548 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 607 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgttagcgtccactgt 136 || |||||| || | || ||||| ||||| |||||||| |||||||| || || || ||| Sbjct: 608 cccgagcagagagtaccggatttcatcaaagcaggtgcagatattgtcagtgtacattgt 667 Query: 137 gagcaaacagcaaccatccatctgcaccgaacagtcgaccagattaaaagtctaggagca 196 || || | | ||||||||| |||| || || ||| | || || ||||| |||| || Sbjct: 668 gaacagcaatccaccatccatttgcatcgtaccgtcaatcaaataaaaagcttaggggct 727 Query: 197 aaggctggagttgttttgaaccctgggactccactcagtgccatagaatatgtacttgaa 256 || |||||||||||| | |||||||| || ||| | ||||| ||||||||||| |||| | Sbjct: 728 aaagctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt-cttgga 786 Query: 257 tctgttg-atctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttat 315 | || || ||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 787 tatggtggatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttat 846 Query: 316 cgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagggagtgaa 375 || || |||||||||||||| | || ||||| ||| | || | |||||||||||| || Sbjct: 847 tgaaagccaagtaaagaaaatctcggacttgaggaaaatgtgtgcagagaagggagtaaa 906 Query: 376 cccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaaggtcattgaagc 435 ||| || ||||| ||||||||||| || | ||| ||||| |||||||| ||||| || Sbjct: 907 cccatgaattgaagttgatggtggtgtgactccagcgaatgcgtacaaggttattgaggc 966 Query: 436 tggcgcgaatgctcttgttgctgg 459 ||| || |||||||| || ||||| Sbjct: 967 tggagcaaatgctctagtggctgg 990
>gb|AF070943.1| Expression vector pFL506 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase mature form Length = 849 Score = 170 bits (86), Expect = 3e-39 Identities = 329/410 (80%) Strand = Plus / Plus Query: 53 gatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggt 112 |||||||||||||||||||| ||||| ||||||||| | ||||| || ||||| || ||| Sbjct: 320 gatgtgcatctgatgattgtagaaccagagcagcgagtcccagacttcatcaaagctggt 379 Query: 113 gctgatattgttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 172 |||||||| || || ||||||||||||| | || | ||||| ||| |||| || || || Sbjct: 380 gctgatatagtgagtgtccactgtgagctagcatccaccattcatttgcatcggaccgta 439 Query: 173 gaccagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactc 232 |||| || || ||| | ||||| || ||||||||||| || |||||||| || ||||| Sbjct: 440 aaccaaatcaagagtttgggagctaaagctggagttgtcttaaaccctggaaccccacta 499 Query: 233 agtgccatagaatatgtacttgaatctgttgatctggtattgattatgtcagtcaatcct 292 ||| | || || || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 500 agtacaattgagtacgtgcttgatgtggttgatctggtcttaattatgtctgtaaaccct 559 Query: 293 gggtttggtgggcagagctttatcgagagtcaagtaaagaaaattgctgatttgagaaaa 352 || || || || || ||||| || ||||| ||||| |||||||| | ||| |||||||| Sbjct: 560 ggcttcggcggacaaagcttcattgagagccaagtcaagaaaatctcagatctgagaaaa 619 Query: 353 ttatgcgaagagaagggagtgaacccctggattgaggttgatggtggagtcagtcccaaa 412 | || | ||||||||| |||||||| ||||||||||| ||||||||||| | ||| | Sbjct: 620 atgtgtgtagagaagggggtgaacccgtggattgaggtagatggtggagttactccagca 679 Query: 413 aatgcctacaaggtcattgaagctggcgcgaatgctcttgttgctggttc 462 ||||| |||||||||||||| ||||| || |||||| | || |||||||| Sbjct: 680 aatgcatacaaggtcattgaggctggagccaatgctttagtcgctggttc 729
>gb|AF070942.1| Expression vector pFL505 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase transit form Length = 993 Score = 170 bits (86), Expect = 3e-39 Identities = 329/410 (80%) Strand = Plus / Plus Query: 53 gatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggt 112 |||||||||||||||||||| ||||| ||||||||| | ||||| || ||||| || ||| Sbjct: 464 gatgtgcatctgatgattgtagaaccagagcagcgagtcccagacttcatcaaagctggt 523 Query: 113 gctgatattgttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 172 |||||||| || || ||||||||||||| | || | ||||| ||| |||| || || || Sbjct: 524 gctgatatagtgagtgtccactgtgagctagcatccaccattcatttgcatcggaccgta 583 Query: 173 gaccagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactc 232 |||| || || ||| | ||||| || ||||||||||| || |||||||| || ||||| Sbjct: 584 aaccaaatcaagagtttgggagctaaagctggagttgtcttaaaccctggaaccccacta 643 Query: 233 agtgccatagaatatgtacttgaatctgttgatctggtattgattatgtcagtcaatcct 292 ||| | || || || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 644 agtacaattgagtacgtgcttgatgtggttgatctggtcttaattatgtctgtaaaccct 703 Query: 293 gggtttggtgggcagagctttatcgagagtcaagtaaagaaaattgctgatttgagaaaa 352 || || || || || ||||| || ||||| ||||| |||||||| | ||| |||||||| Sbjct: 704 ggcttcggcggacaaagcttcattgagagccaagtcaagaaaatctcagatctgagaaaa 763 Query: 353 ttatgcgaagagaagggagtgaacccctggattgaggttgatggtggagtcagtcccaaa 412 | || | ||||||||| |||||||| ||||||||||| ||||||||||| | ||| | Sbjct: 764 atgtgtgtagagaagggggtgaacccgtggattgaggtagatggtggagttactccagca 823 Query: 413 aatgcctacaaggtcattgaagctggcgcgaatgctcttgttgctggttc 462 ||||| |||||||||||||| ||||| || |||||| | || |||||||| Sbjct: 824 aatgcatacaaggtcattgaggctggagccaatgctttagtcgctggttc 873
>gb|AF070941.1| Spinacia oleracea ribulose-phosphate 3-epimerase (RPE) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1230 Score = 170 bits (86), Expect = 3e-39 Identities = 329/410 (80%) Strand = Plus / Plus Query: 53 gatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggt 112 |||||||||||||||||||| ||||| ||||||||| | ||||| || ||||| || ||| Sbjct: 429 gatgtgcatctgatgattgtagaaccagagcagcgagtcccagacttcatcaaagctggt 488 Query: 113 gctgatattgttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 172 |||||||| || || ||||||||||||| | || | ||||| ||| |||| || || || Sbjct: 489 gctgatatagtgagtgtccactgtgagctagcatccaccattcatttgcatcggaccgta 548 Query: 173 gaccagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactc 232 |||| || || ||| | ||||| || ||||||||||| || |||||||| || ||||| Sbjct: 549 aaccaaatcaagagtttgggagctaaagctggagttgtcttaaaccctggaaccccacta 608 Query: 233 agtgccatagaatatgtacttgaatctgttgatctggtattgattatgtcagtcaatcct 292 ||| | || || || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 609 agtacaattgagtacgtgcttgatgtggttgatctggtcttaattatgtctgtaaaccct 668 Query: 293 gggtttggtgggcagagctttatcgagagtcaagtaaagaaaattgctgatttgagaaaa 352 || || || || || ||||| || ||||| ||||| |||||||| | ||| |||||||| Sbjct: 669 ggcttcggcggacaaagcttcattgagagccaagtcaagaaaatctcagatctgagaaaa 728 Query: 353 ttatgcgaagagaagggagtgaacccctggattgaggttgatggtggagtcagtcccaaa 412 | || | ||||||||| |||||||| ||||||||||| ||||||||||| | ||| | Sbjct: 729 atgtgtgtagagaagggggtgaacccgtggattgaggtagatggtggagttactccagca 788 Query: 413 aatgcctacaaggtcattgaagctggcgcgaatgctcttgttgctggttc 462 ||||| |||||||||||||| ||||| || |||||| | || |||||||| Sbjct: 789 aatgcatacaaggtcattgaggctggagccaatgctttagtcgctggttc 838
>gb|L42328.1|SPIR5P3E Spinacia oleracea nuclear-encoded chloroplast ribulose-5-phosphate 3-epimerase mRNA, complete cds Length = 1198 Score = 170 bits (86), Expect = 3e-39 Identities = 329/410 (80%) Strand = Plus / Plus Query: 53 gatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggt 112 |||||||||||||||||||| ||||| ||||||||| | ||||| || ||||| || ||| Sbjct: 421 gatgtgcatctgatgattgtagaaccagagcagcgagtcccagacttcatcaaagctggt 480 Query: 113 gctgatattgttagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 172 |||||||| || || ||||||||||||| | || | ||||| ||| |||| || || || Sbjct: 481 gctgatatagtgagtgtccactgtgagctagcatccaccattcatttgcatcggaccgta 540 Query: 173 gaccagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactc 232 |||| || || ||| | ||||| || ||||||||||| || |||||||| || ||||| Sbjct: 541 aaccaaatcaagagtttgggagctaaagctggagttgtcttaaaccctggaaccccacta 600 Query: 233 agtgccatagaatatgtacttgaatctgttgatctggtattgattatgtcagtcaatcct 292 ||| | || || || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 601 agtacaattgagtacgtgcttgatgtggttgatctggtcttaattatgtctgtaaaccct 660 Query: 293 gggtttggtgggcagagctttatcgagagtcaagtaaagaaaattgctgatttgagaaaa 352 || || || || || ||||| || ||||| ||||| |||||||| | ||| |||||||| Sbjct: 661 ggcttcggcggacaaagcttcattgagagccaagtcaagaaaatctcagatctgagaaaa 720 Query: 353 ttatgcgaagagaagggagtgaacccctggattgaggttgatggtggagtcagtcccaaa 412 | || | ||||||||| |||||||| ||||||||||| ||||||||||| | ||| | Sbjct: 721 atgtgtgtagagaagggggtgaacccgtggattgaggtagatggtggagttactccagca 780 Query: 413 aatgcctacaaggtcattgaagctggcgcgaatgctcttgttgctggttc 462 ||||| |||||||||||||| ||||| || |||||| | || |||||||| Sbjct: 781 aatgcatacaaggtcattgaggctggagccaatgctttagtcgctggttc 830
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 161 bits (81), Expect = 2e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 64 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 123 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 3696874 gatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatattgt 3696933 Query: 124 tagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 172 |||||| |||||||||||| | ||||||||||||| |||||||||||| Sbjct: 3696934 tagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtc 3696982 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 259 tgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttatcga 318 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 3698053 tgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagctttattga 3698112 Query: 319 gagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagg 368 || ||||| ||||| ||||| || ||||||| |||||| | |||||||| Sbjct: 3698113 aagccaagtgaagaagattgcagagttgagaagattatgtgcagagaagg 3698162 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 366 agggagtgaacccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaagg 425 ||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 3698231 agggagtaaacccttggattgaggttgatggtggagttggtcccaaaaacgcctacaagg 3698290 Query: 426 tca 428 ||| Sbjct: 3698291 tca 3698293 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 176 cagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactcagt 235 ||||| |||||||| |||||||||||||||||||||||||| |||| || || |||| | Sbjct: 3697444 cagatcaaaagtcttggagcaaaggctggagttgttttgaatcctgcaacccctctcact 3697503 Query: 236 gccatagaatatgtacttga 255 || ||||| ||||||||||| Sbjct: 3697504 gcgatagattatgtacttga 3697523 Score = 67.9 bits (34), Expect = 3e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctg 64 |||||||||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 3696726 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctg 3696775 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 423 aggtcattgaagctggcgcgaatgctcttgttgctggttc 462 |||||||||||||||| || || || ||||||||||||| Sbjct: 3698407 aggtcattgaagctggggccaacgccattgttgctggttc 3698446
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 161 bits (81), Expect = 2e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 64 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 123 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 84503 gatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatattgt 84444 Query: 124 tagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 172 |||||| |||||||||||| | ||||||||||||| |||||||||||| Sbjct: 84443 tagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtc 84395 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 259 tgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttatcga 318 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 83324 tgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagctttattga 83265 Query: 319 gagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagg 368 || ||||| ||||| ||||| || ||||||| |||||| | |||||||| Sbjct: 83264 aagccaagtgaagaagattgcagagttgagaagattatgtgcagagaagg 83215 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 366 agggagtgaacccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaagg 425 ||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 83146 agggagtaaacccttggattgaggttgatggtggagttggtcccaaaaacgcctacaagg 83087 Query: 426 tca 428 ||| Sbjct: 83086 tca 83084 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 176 cagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactcagt 235 ||||| |||||||| |||||||||||||||||||||||||| |||| || || |||| | Sbjct: 83933 cagatcaaaagtcttggagcaaaggctggagttgttttgaatcctgcaacccctctcact 83874 Query: 236 gccatagaatatgtacttga 255 || ||||| ||||||||||| Sbjct: 83873 gcgatagattatgtacttga 83854 Score = 67.9 bits (34), Expect = 3e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctg 64 |||||||||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 84651 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctg 84602 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 423 aggtcattgaagctggcgcgaatgctcttgttgctggttc 462 |||||||||||||||| || || || ||||||||||||| Sbjct: 82970 aggtcattgaagctggggccaacgccattgttgctggttc 82931
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 161 bits (81), Expect = 2e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 64 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 123 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 3696985 gatgattgtggaacctgagcaacgagttccagattttatcaaggcaggtgctgatattgt 3697044 Query: 124 tagcgtccactgtgagcaaacagcaaccatccatctgcaccgaacagtc 172 |||||| |||||||||||| | ||||||||||||| |||||||||||| Sbjct: 3697045 tagcgttcactgtgagcaatcgtcaaccatccatctacaccgaacagtc 3697093 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 259 tgttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttatcga 318 ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 3698164 tgttgatctagtattgattatgtcggtgaatcctgggtttggtgggcagagctttattga 3698223 Query: 319 gagtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagg 368 || ||||| ||||| ||||| || ||||||| |||||| | |||||||| Sbjct: 3698224 aagccaagtgaagaagattgcagagttgagaagattatgtgcagagaagg 3698273 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 366 agggagtgaacccctggattgaggttgatggtggagtcagtcccaaaaatgcctacaagg 425 ||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 3698342 agggagtaaacccttggattgaggttgatggtggagttggtcccaaaaacgcctacaagg 3698401 Query: 426 tca 428 ||| Sbjct: 3698402 tca 3698404 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 176 cagattaaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactcagt 235 ||||| |||||||| |||||||||||||||||||||||||| |||| || || |||| | Sbjct: 3697555 cagatcaaaagtcttggagcaaaggctggagttgttttgaatcctgcaacccctctcact 3697614 Query: 236 gccatagaatatgtacttga 255 || ||||| ||||||||||| Sbjct: 3697615 gcgatagattatgtacttga 3697634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 16 ttgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgcatctg 64 |||||||||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 3696837 ttgttgatgctctgcggccagtcactgatcttccgttggatgtgcatctg 3696886 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 423 aggtcattgaagctggcgcgaatgctcttgttgctggttc 462 |||||||||||||||| || || || ||||||||||||| Sbjct: 3698518 aggtcattgaagctggggccaacgccattgttgctggttc 3698557
>gb|AF369887.1| Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1156 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 182 aaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactcagtgccata 241 ||||| || ||||| || ||||||||||| | |||||||| || ||||| ||||| ||| Sbjct: 507 aaaagcctgggagctaaagctggagttgtcctaaaccctggtaccccactaagtgcgata 566 Query: 242 gaatatgtacttgaatctgttgatctggtattgattatgtcagtcaatcctgggtttggt 301 |||||||| ||||| |||||| |||| || |||||||| || || ||||| |||||| Sbjct: 567 gaatatgtccttgatgtggttgatttggtcttaattatgtctgtaaaccctggctttggt 626 Query: 302 gggcagagctttatcgagagtcaagtaaagaaaattgctgatttgagaaaattatgcgaa 361 || || || ||||| |||||||| ||||||||||||||||| ||||||| ||| |||| Sbjct: 627 ggccaaagttttattgagagtcacgtaaagaaaattgctgagttgagaagattgtgcgtg 686 Query: 362 gagaagggagtgaacccctggattgaggttgatggtggagtcagtcccaaaaatgcctac 421 |||||||| || || || |||||||| || |||||||| || | || |||||| ||| Sbjct: 687 gagaagggtgtcaatccatggattgaagtcgatggtggggttaccccagcaaatgcttac 746 Query: 422 aaggtcattgaagctggcgcgaatgctcttgttgctggttc 462 ||||| ||||| ||||| || ||||| || ||||||||||| Sbjct: 747 aaggtgattgaggctggagctaatgcactagttgctggttc 787 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 50 ttggatgtgcatctgatgattgtggaacctgagcagcgaattccagattttatcaaggca 109 |||||||| || ||||||||||| ||||| || ||||| | |||||||| ||||| ||| Sbjct: 375 ttggatgtacacctgatgattgtagaaccagaccagcgggtgccagatttcatcaaagca 434 Query: 110 ggtgctga 117 || ||||| Sbjct: 435 ggagctga 442
>dbj|AP004930.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13G01, TM0093a, complete sequence Length = 42990 Score = 97.6 bits (49), Expect = 3e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 260 gttgatctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttatcgag 319 |||||| |||| || |||||||| || || ||||| |||||||| ||||| ||||| || Sbjct: 3420 gttgatttggtcttaattatgtctgtaaaccctggctttggtggccagagttttattgaa 3479 Query: 320 agtcaagtaaagaaaattgctgatttgagaaaattatgcgaagagaagg 368 |||||||||||||||||| |||| ||||||| |||||||| |||||||| Sbjct: 3480 agtcaagtaaagaaaatttctgacttgagaagattatgcgcagagaagg 3528 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 182 aaaagtctaggagcaaaggctggagttgttttgaaccctgggactccactcagtgccata 241 |||||||| ||||| || ||||||||||| | |||||||| || ||||| ||||| ||| Sbjct: 2500 aaaagtctgggagctaaagctggagttgtcctaaaccctggtaccccactgagtgcaata 2559 Query: 242 gaatatgtacttga 255 |||||||| ||||| Sbjct: 2560 gaatatgttcttga 2573 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 64 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctga 117 ||||||||| |||||||| ||||| | || ||||||||||||||||| ||||| Sbjct: 1068 gatgattgtagaacctgaacagcgggtgccggattttatcaaggcaggggctga 1121
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 272 ttgattatgtcagtcaatcctgggtttggtgggcagagctttatcgagagtcaagtaaag 331 ||||| ||||| || || ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 89960 ttgataatgtctgtgaaccctgggtttggtgggcagagctttatcgaaagccaagtaaag 90019 Query: 332 aaaattgctgatttgagaa 350 ||||| || || ||||||| Sbjct: 90020 aaaatcgcagacttgagaa 90038 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 64 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 123 |||||| ||||||||||| ||| || | |||||||| ||||| |||||||| |||||| | Sbjct: 89572 gatgatagtggaacctgaacagagagtgccagatttcatcaaagcaggtgcagatattat 89631 Query: 124 tagcgtccactgtgagcaa 142 ||| || || ||||||||| Sbjct: 89632 tagtgtacattgtgagcaa 89650 Score = 48.1 bits (24), Expect = 0.026 Identities = 55/64 (85%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 1 caattggaccattaattgttgatgctctgcgtccagtgactgatcttcc-ttggatgtgc 59 ||||||||||| | | |||||||||||||| || ||||| |||||||| |||||||| | Sbjct: 89427 caattggaccactcgtggttgatgctctgcgccctgtgacagatcttccattggatgttc 89486 Query: 60 atct 63 |||| Sbjct: 89487 atct 89490
>emb|BX831851.1|CNS0A0WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 77.8 bits (39), Expect = 3e-11 Identities = 91/107 (85%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 18 gttgatgctctgcgtccagtgactgatcttcctt-ggatgtgcatctgatgattgtggaa 76 ||||||||| |||| || ||||| |||||||||| |||||| ||||||||||| |||||| Sbjct: 603 gttgatgctttgcgccctgtgacagatcttcctttggatgttcatctgatgatagtggaa 662 Query: 77 cctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 123 || |||||| || | || ||||| ||||| |||||| | |||||||| Sbjct: 663 cccgagcagagagtaccggatttcatcaaagcaggttcagatattgt 709
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13 Length = 80376 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 263 gatctggtattgattatgtcagtcaatcctgggtttggtgggcagagctttatcgagagt 322 |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| || || Sbjct: 55203 gatctggtcttgatcatgtcggtcaaccctggttttggtggacagagctttattgaaagc 55144 Query: 323 caagtaaagaaaat 336 |||||||||||||| Sbjct: 55143 caagtaaagaaaat 55130 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 366 agggagtgaacccctggattgaggttgatggtggagtca 404 ||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 55025 agggagtaaacccatggattgaagttgatggtggtgtca 54987 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Minus Query: 200 gctggagttgttttgaaccctgggactccactcagtgccatagaatatgt 249 |||||||||||| | |||||||| || ||| | ||||| ||||||||||| Sbjct: 55355 gctggagttgttctaaaccctggaaccccattgagtgcaatagaatatgt 55306
>gb|AF173670.1|AF173670 Beta vulgaris clone PPE110UNI pentose-5-phosphate 3-epimerase (Ppe) gene, partial sequence Length = 724 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 64 gatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctgatattgt 123 ||||||||||||||| || |||||| ||||||| || || || || ||||||||||| || Sbjct: 173 gatgattgtggaaccagatcagcgagttccagacttcattaaagctggtgctgatatagt 232 Query: 124 tagcgtccactgtgagcaa 142 || || |||||||||||| Sbjct: 233 gagtgttcactgtgagcaa 251
>emb|X96878.1|CRPPEGENE C.reinhardtii mRNA for pentose-5-phosphate 3-epimerase Length = 820 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 362 gagaagggagtgaacccctggattgaggttgatggtgg 399 |||||||| ||||||||||||||||||||||| ||||| Sbjct: 249 gagaagggcgtgaacccctggattgaggttgacggtgg 286
>gb|AF389523.1| Physcomitrella patens clone PPAR4 mRNA sequence Length = 206 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 272 ttgattatgtcagtcaatcctgggtttggtgggcagagctttatcgagagtcaagtaaag 331 ||||| ||||| ||||| ||||| |||||||| |||||||| ||||| | ||||||||| Sbjct: 93 ttgatcatgtctgtcaaccctggatttggtggacagagcttcatcgaaacccaagtaaag 34 Query: 332 aa 333 || Sbjct: 33 aa 32
>gb|AE006199.1| Pasteurella multocida subsp. multocida str. Pm70 section 166 of 204 of the complete genome Length = 10462 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 276 ttatgtcagtcaatcctgggtttggtgg 303 |||||||||||||||| ||||||||||| Sbjct: 1226 ttatgtcagtcaatccggggtttggtgg 1253
>gb|AC078859.13| Homo sapiens 3 BAC RP11-588N12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176802 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 238 catagaatatgtacttgaatctgttga 264 |||||||||||||||| |||||||||| Sbjct: 9600 catagaatatgtacttcaatctgttga 9626
>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence Length = 158312 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 291 ctgggtttggtgggcagagcttt 313 ||||||||||||||||||||||| Sbjct: 53853 ctgggtttggtgggcagagcttt 53875
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 273 tgattatgtcagtcaatcctgggtttggtgggcag 307 |||||||| ||||||||||||| ||||| |||||| Sbjct: 687388 tgattatgacagtcaatcctggctttggagggcag 687354
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 278 atgtcagtcaatcctgggtttggtgggcagagctttat 315 ||||| || ||||| |||||||||||||| |||||||| Sbjct: 2873595 atgtcggttaatccagggtttggtgggcaaagctttat 2873558
>emb|BX321882.7| Zebrafish DNA sequence from clone DKEYP-30F1 in linkage group 12, complete sequence Length = 187475 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 tgaatctgttgatctggtatt 273 ||||||||||||||||||||| Sbjct: 164430 tgaatctgttgatctggtatt 164410
>gb|AC008514.8| Homo sapiens chromosome 5 clone CTC-455F18, complete sequence Length = 172525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 ctaggagcaaaggctggagtt 208 ||||||||||||||||||||| Sbjct: 62693 ctaggagcaaaggctggagtt 62673
>gb|AC006975.2|AC006975 Homo sapiens PAC clone RP5-1026B21 from X, complete sequence Length = 146410 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 gaaaattatgcgaagagaagggagtgaac 376 |||||||||||| ||||||| |||||||| Sbjct: 80227 gaaaattatgcgtagagaagagagtgaac 80199
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 tcaagtaaagaaaattgctga 342 ||||||||||||||||||||| Sbjct: 144824 tcaagtaaagaaaattgctga 144844
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 287 aatcctgggtttggtgggcagagctttatcgagagt 322 |||||||| ||||||||||| || ||||| |||||| Sbjct: 1685937 aatcctggatttggtgggcaaagttttatagagagt 1685972
>gb|AE013107.1| Thermoanaerobacter tengcongensis MB4, section 134 of 244 of the complete genome Length = 12891 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 ccttggatgtgcatctgatgattg 71 |||| ||||||||||||||||||| Sbjct: 1680 cctttgatgtgcatctgatgattg 1657
>gb|AE006435.1| Lactococcus lactis subsp. lactis IL1403 section 197 of 218 of the complete genome Length = 11266 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 caattggaccattaattgtt 20 |||||||||||||||||||| Sbjct: 6041 caattggaccattaattgtt 6022
>emb|CR788248.24| Zebrafish DNA sequence from clone CH211-112B1 in linkage group 1, complete sequence Length = 87741 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 aagaaaattgctgatttgag 348 |||||||||||||||||||| Sbjct: 25448 aagaaaattgctgatttgag 25467
>gb|AC121840.3| Mus musculus BAC clone RP24-79E2 from chromosome 3, complete sequence Length = 180558 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 atctgatgattgtggaacct 79 |||||||||||||||||||| Sbjct: 168118 atctgatgattgtggaacct 168137
>emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M11 on chromosome 1p31.1 Contains the 3' end of the SIAT7E gene for sialyltransferase 7 ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) E, a novel gene and 3' end of the PIGK gene for phosphatidylinositol glycan class K, complete sequence Length = 138783 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tctggtattgattatgtcag 284 |||||||||||||||||||| Sbjct: 52832 tctggtattgattatgtcag 52851
>emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in linkage group 23, complete sequence Length = 220945 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aagaaaattgctgatttgag 348 |||||||||||||||||||| Sbjct: 172998 aagaaaattgctgatttgag 172979
>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11 Length = 347636 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttggatgtgcatctgatgat 69 |||||||||||||||||||| Sbjct: 242716 ttggatgtgcatctgatgat 242697
>emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 5/11 Length = 302050 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 272 ttgattatgtcagtcaatcctgggtttggtgg 303 ||||||||| | ||||||||||| |||||||| Sbjct: 223733 ttgattatgaccgtcaatcctggttttggtgg 223764
>emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chromosome 11, complete sequence Length = 101598 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 tcagtcccaaaaatgcctac 421 |||||||||||||||||||| Sbjct: 63422 tcagtcccaaaaatgcctac 63403
>emb|BX001068.7| Mouse DNA sequence from clone RP23-54E4 on chromosome 13 Contains the gene for a novel SCAN domain containing C2H2 type zinc finger protein, two novel genes (933017L02Rik, 492150E05Rik), the Skz1 gene for SCAN-KRAB-zinc finger gene 1, a ribosomal protein L29 (Rpl29) pseudogene, the Zfp96 gene for Zinc finger protein 96, the gene for olfactory receptor MOR256-16, the gene for a novel protein similar to plasma glutathione peroxidase Gpx3, the (pseudo)gene for a novel protein similar to ribosomal protein L29 (Rpl29) and the Gpx5 gene for glutathione peroxidase 5 (epididymal androgen-related protein), complete sequence Length = 175880 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 aaccatccatctgcaccgaa 167 |||||||||||||||||||| Sbjct: 15178 aaccatccatctgcaccgaa 15159
>gb|AF401518.1| Lactococcus lactis X-prolyl dipeptidyl aminopeptidase (pepX) gene, complete cds Length = 2292 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 caattggaccattaattgtt 20 |||||||||||||||||||| Sbjct: 1852 caattggaccattaattgtt 1833
>gb|AC073358.14| Homo sapiens 3 BAC RP11-501M7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164078 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 caagtaaagaaaattgctgatttg 346 |||||||| ||||||||||||||| Sbjct: 112268 caagtaaacaaaattgctgatttg 112291
>gb|AC091882.3| Homo sapiens chromosome 5 clone RP11-101A19, complete sequence Length = 126486 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 aattccagattttatcaagg 107 |||||||||||||||||||| Sbjct: 93894 aattccagattttatcaagg 93875
>emb|BX821313.1|CNS0AA43 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 433 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tgctgatttgagaaaattat 356 |||||||||||||||||||| Sbjct: 391 tgctgatttgagaaaattat 410
>gb|AC002978.1| Homo sapiens 12 PAC P336P3 (Research Park Cancer Institute Human Genome PAC library) complete sequence Length = 102591 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cctggattgaggttgatggtggag 401 |||||||||||| ||||||||||| Sbjct: 10904 cctggattgaggctgatggtggag 10927
>gb|AC073043.5| Homo sapiens BAC clone RP11-15N15 from 2, complete sequence Length = 165854 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tccagattttatcaaggcag 110 |||||||||||||||||||| Sbjct: 34239 tccagattttatcaaggcag 34220
>gb|AF255725.1|AF255725 Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, partial cds Length = 162 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 62 ctgatgattgtggaacctgagcagcgaattccagattttatcaaggcaggtgctga 117 ||||||||||| ||||| || ||||| | |||||||| ||||| ||||| ||||| Sbjct: 1 ctgatgattgtagaaccagaccagcgggtgccagatttcatcaaagcaggagctga 56
>emb|AL807802.22| Mouse DNA sequence from clone RP23-351B24 on chromosome 4, complete sequence Length = 186857 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cctgggactccactcagtgc 237 |||||||||||||||||||| Sbjct: 169007 cctgggactccactcagtgc 169026
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 261 ttgatctggtattgattatgtcagtcaatcctgggtttggtgggcaga 308 ||||| ||||||| ||||| |||| || ||||| ||||||||||||| Sbjct: 3651265 ttgatatggtattacttatgacagtaaaccctggatttggtgggcaga 3651218
>gb|AC127263.4| Mus musculus BAC clone RP24-328P2 from 6, complete sequence Length = 149105 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cctgggactccactcagtgc 237 |||||||||||||||||||| Sbjct: 146832 cctgggactccactcagtgc 146851
>gb|AC166825.3| Mus musculus BAC clone RP23-368D12 from chromosome 6, complete sequence Length = 182232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cctgggactccactcagtgc 237 |||||||||||||||||||| Sbjct: 98197 cctgggactccactcagtgc 98178 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,383,452 Number of Sequences: 3902068 Number of extensions: 4383452 Number of successful extensions: 99549 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99284 Number of HSP's gapped (non-prelim): 229 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
