ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3b01 |
|---|---|
| Clone Library Name | barley_pub |
>DXR_PROMM (Q7V6J8) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 412 Score = 36.6 bits (83), Expect = 0.060 Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 4/148 (2%) Frame = -3 Query: 607 ASLVPVCEQSCVVVPIEVRA-NLPASLDAVEVLAEGAPQDPQLGQAELVGLLDLGLPNVD 431 ASL+P +Q +P E + +LP L E L A D A+LV +G + Sbjct: 54 ASLLPELKQQLNALPSEQQPPHLPQLLAGPEGLNVAASWD----SADLVVSGIVGCAGLL 109 Query: 430 RRLGAVVL---LALNVRYRVLMAALVEHGEIDRHRVRHRGLVLPAVAPHRARAHQVVLLG 260 L A+ LAL + ++ AA V E+ R R +LPA + H A L G Sbjct: 110 PTLAAIKAGKDLALANKETLIAAAPVVLPELKRSGSR----LLPADSEHSAIFQ--CLQG 163 Query: 259 PPDRDGARRAPAVPMPQLNHRPLAVAGG 176 P + AR + VP P L H L +GG Sbjct: 164 TPWAENARLSTGVPTPGLRHIQLTASGG 191
>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 35.0 bits (79), Expect = 0.17 Identities = 35/123 (28%), Positives = 49/123 (39%) Frame = +1 Query: 7 QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRR 186 + GR R P G R A AP G+ PP + H D+ + G R + Sbjct: 820 ELGRDGARGPVGGKARPEAAEAPEGVDPP-RRHHRHRDKDKTPAAGDQDRAEAP------ 872 Query: 187 RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 366 + G A E + R HR ++ G P+AR + G P+ GR RH +R Sbjct: 873 -KAESGEPGAREERPRP-HRSHSKEAAGPPEAR--------SERGRGPGPEGGR-RHHRR 921 Query: 367 GRP 375 G P Sbjct: 922 GSP 924
>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 690 Score = 35.0 bits (79), Expect = 0.17 Identities = 47/162 (29%), Positives = 60/162 (37%), Gaps = 4/162 (2%) Frame = +1 Query: 58 RAHLAPAGLRPPFPQEPHHPDETELSPGG--PVRRVQGQCGLLRRRREADGSA--VASER 225 RA APA P P + +P P RR RR +AD SA A + Sbjct: 64 RAAQAPAA--PAAETAPAAASSEDAAPAAERPARRRS-------RRADADTSAPAAAQDG 114 Query: 226 QVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGR 405 Q +A R +Q R A + D + EA+ G D +S RGR Sbjct: 115 QPQAEAREAQTEQAPRETASDQDRSGGSEARDEG--EDRPQSERRSRGR----------- 161 Query: 406 EVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHR 531 RR GDD QDR + Q D RRG ++ R Sbjct: 162 ---RRAGDDDAQQGQDRRSDGAQGEDGADAD---RRGDREDR 197
>STIM2_HUMAN (Q9P246) Stromal interaction molecule 2 precursor| Length = 746 Score = 34.3 bits (77), Expect = 0.30 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Frame = +1 Query: 58 RAHLAPAGLRPPFPQEPHHPDETE---LSPGGPVRRVQGQCGLLRRRREADGSAVASERQ 228 RA LAP P P+ PHHP T SP + V L R E + ++E+Q Sbjct: 528 RAQLAPHAPHPSHPRHPHHPQHTPHSLPSPDPDILSVSSCPALYRNEEEEEAIYFSAEKQ 587
>FMR2_ANTEL (Q16994) Antho-RFamide neuropeptides type 2 precursor [Contains:| Antho-RFamide] Length = 429 Score = 34.3 bits (77), Expect = 0.30 Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 14/116 (12%) Frame = +1 Query: 151 RRVQGQCGLLRRRR--EADGSAVASERQVRAGH----RPGPEDQE--GRPD----ARELD 294 R +QG+ G + R D E Q R G R G EDQ GR D RE Sbjct: 215 RELQGRFGREFQGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQ 274 Query: 295 AALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQG--DDQRLGAQDR 456 +E Q G D GR +GR D R GRE+ R G D R G +D+ Sbjct: 275 GRFGRELQGRFGREDQGRFGREDQGRFGREDQGRFGRELQGRFGREDQGRFGREDQ 330 Score = 31.6 bits (70), Expect = 1.9 Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 2/109 (1%) Frame = +1 Query: 136 PGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEA 315 PG R +QG+ G RE G E Q R G REL +E Sbjct: 186 PGRYGRELQGRFG-----RELQGR-FGREAQGRFG--------------RELQGRFGREF 225 Query: 316 QAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQG--DDQRLGAQDR 456 Q G D GR +GR D R GRE R G D R G +D+ Sbjct: 226 QGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQ 274
>FMR1_ANTEL (P10419) Antho-RFamide neuropeptides type 1 precursor [Contains:| Antho-RFamide] Length = 435 Score = 33.9 bits (76), Expect = 0.39 Identities = 42/116 (36%), Positives = 50/116 (43%), Gaps = 9/116 (7%) Frame = +1 Query: 136 PGGPVRRVQGQCGLL---RRRREADGSAVASERQVRAGH----RPGPEDQEGRPDARELD 294 PG R +QG+ G R REA G E Q R G R G EDQ GR RE Sbjct: 186 PGRYGRELQGRFGRELQGRFGREAQGR-FGRELQGRFGREFQGRFGREDQ-GR-FGREDQ 242 Query: 295 AALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDD--QRLGAQDR 456 +E Q G D GR +GR D R GRE+ R G + R G +D+ Sbjct: 243 GRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGRELQGRFGREFQGRFGREDQ 298
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 33.9 bits (76), Expect = 0.39 Identities = 46/162 (28%), Positives = 59/162 (36%), Gaps = 4/162 (2%) Frame = +1 Query: 4 QQAGRQEH---REP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCG 174 +Q+G EH R P RG R G P FP + PD+ P +R G Sbjct: 976 EQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH-----PDKRF----G 1026 Query: 175 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 354 R E G + E + R G PGP PD RE G R Sbjct: 1027 HRLREFEGRGGPLPQEEKWRRG-GPGPPFP---PDHREFSE---------------GDGR 1067 Query: 355 HAQRGRPSTRDIVRSGREVLRRQGDDQRL-GAQDRAAQRVQP 477 A RG P + R G E R +D R G ++ + +R P Sbjct: 1068 GAARGPPGAWEGRRPGDERFPRDPEDPRFRGRREESFRRGAP 1109
>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)| (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide HQ-34; Peptide KR-11] Length = 668 Score = 33.9 bits (76), Expect = 0.39 Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 10/119 (8%) Frame = +1 Query: 40 RGHHRLRAHLAPAGLRPPFPQEPHHP-----DETELSPGGPVR---RVQGQCGLLRRRRE 195 RGH R + + GL P Q HP E E G VR VQ L+ R Sbjct: 299 RGHPREESEESVLGLASPGGQRTRHPTHYPASEEEAEHGEEVRSSSSVQAPGDLVGARYG 358 Query: 196 ADGSAVASERQVRAGHRPGPE--DQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 366 G A + RA RPG E +Q+ R A + LR + H E + R QR Sbjct: 359 GRGGA-----EHRAARRPGEESPEQDRRVGA---SSELRNKGPGHSEESEEERGDEGQR 409
>BEGIN_RAT (O88881) Brain-enriched guanylate kinase-associated protein| Length = 611 Score = 33.5 bits (75), Expect = 0.51 Identities = 23/70 (32%), Positives = 27/70 (38%) Frame = +2 Query: 128 SYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRTKKDDLMRASSMRRYG 307 S P D S GDG+R VQL C PG+ P D + SSM Sbjct: 519 SLSPSRSADPLPGYATSDGDGDRLGVQL------CGPGSSPEPEHGSRDSLEPSSMEASP 572 Query: 308 RKHKPTVANP 337 H PT +P Sbjct: 573 EMHPPTRLSP 582
>CWC26_CRYNE (Q5KM20) Pre-mRNA-splicing factor CWC26| Length = 331 Score = 33.5 bits (75), Expect = 0.51 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 22/174 (12%) Frame = +1 Query: 70 APAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRP 249 +P ++P +EP D + PV+ + + GL R A +ER++ P Sbjct: 112 SPQDIKPDIKEEP---DIDGPAASAPVQMTKRRGGL----RTAAQLKEDTERELAEQRSP 164 Query: 250 GPEDQEGRPDARE----------LDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRS 399 P + E RPD E +D RQE + E + R + A+R + + R Sbjct: 165 SPAEGEERPDPTETVHRDATGKIIDVKKRQEEERIREEEE--RRKEAERKEWTKGMVQRR 222 Query: 400 GREVLR------------RQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQ 525 RE R R DD R+ + + +R A L ++GP++ Sbjct: 223 DREERRRLEKKMAEADVGRSKDDVRMNKEMKEEERWNDPAAAFLTKKKKKGPRR 276
>IF2_ANAMM (Q5PAJ5) Translation initiation factor IF-2| Length = 832 Score = 33.1 bits (74), Expect = 0.66 Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 3/105 (2%) Frame = +1 Query: 142 GPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPG--PEDQEGRPDARELDAALRQEA 315 G V RV G+ R+ A GS VASE R HRP + Q R + D+ L E Sbjct: 272 GDVLRVLSHMGVEARQNTAIGSDVASEVAERFSHRPKVVSKIQMERELSDISDSGLALEP 331 Query: 316 QAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRR-QGDDQRLGA 447 + P V H G+ S D++R + +G Q +GA Sbjct: 332 R----PPVVTVMGHVDHGKTSLLDVLRKSNVAEKEFRGITQHIGA 372
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 32.7 bits (73), Expect = 0.87 Identities = 43/174 (24%), Positives = 59/174 (33%), Gaps = 17/174 (9%) Frame = +1 Query: 7 QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHH---------PDETELSPGGPVRRV 159 + GR R P G R AP G PP H P E +R Sbjct: 821 EPGRDAPRGPPGGKSRPDGSEAPEGADPPRRHHRHRDKDKAPATVPSAGEQDRAEALRAE 880 Query: 160 QGQCGLLRRR---READGSAVASERQVRAGHRPGPEDQEGRPDARE---LDAALRQEAQ- 318 G+ G R R + +VR+ GP + GR R +AA R+ + Sbjct: 881 GGELGPREERGRPRRSRSKEAPGAPEVRSDRGRGPCPEGGRRHHRRGSPEEAAEREPRRH 940 Query: 319 -AHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQP 477 AH PD G+ A R R R+G R+ + A+ A+ P Sbjct: 941 RAHRHGPDPGKEGPASGTRGERRARHRTGPRACPREAESSEEPARRHRARHKAP 994
>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)| Length = 415 Score = 32.7 bits (73), Expect = 0.87 Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 3/121 (2%) Frame = +1 Query: 22 EHREP*RGHHRLRAHLAPAGLRPPFPQE---PHHPDETELSPGGPVRRVQGQCGLLRRRR 192 + R P +G L PAG P PQ P + +S P+ + QG R+ R Sbjct: 210 QQRPPPQGQQHLSGLGPPAG--SPLPQRLPSPTSAPQQPVSQAQPLSQAQG-----RQSR 262 Query: 193 EADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGR 372 G A R P P+ Q G P A + Q G P G+ R + Sbjct: 263 PVAGGPGAPPA-ARPPASPSPQRQAGPPQATRQTSVSGQAPPKASGAPPSGQQRQGPPQK 321 Query: 373 P 375 P Sbjct: 322 P 322
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 32.7 bits (73), Expect = 0.87 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Frame = +1 Query: 118 DETELSPGGPV----RRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDAR 285 D+TE P RR +G G R RR A+ V++ + +P P RP R Sbjct: 317 DDTETEPETDAEVESRRTRGASGAARARRPAERQYVSTRGRQTPAVQPAPRSLARRPCGR 376 Query: 286 ELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTR 384 + +++ GG D R A R P+ + Sbjct: 377 AAAVSAPPSSRSRGGRRD-PRLPAAPRAAPAAQ 408
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 32.7 bits (73), Expect = 0.87 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Frame = +1 Query: 118 DETELSPGGPV----RRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDAR 285 D+TE P RR +G G R RR A+ V++ + +P P RP R Sbjct: 317 DDTETEPETDAEVESRRTRGASGAARARRPAERQYVSTRGRQTPAVQPAPRSLARRPCGR 376 Query: 286 ELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTR 384 + +++ GG D R A R P+ + Sbjct: 377 AAAVSAPPSSRSRGGRRD-PRLPAAPRAAPAAQ 408
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 32.7 bits (73), Expect = 0.87 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = +1 Query: 1 AQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLL 180 AQQAG + + G + A +PP P P +T L GPV++V Q G Sbjct: 263 AQQAGPPKQQP---GSEKPTAQQTGPAKQPPQPG----PGKTPLQQTGPVKQVPPQAGPT 315 Query: 181 RRRREADGSAVASERQ----VRAGHRPGPE 258 + + G+A + +Q G +PGPE Sbjct: 316 KPSSQTAGAAKSLAQQPGLTKPPGQQPGPE 345
>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)| Length = 2494 Score = 32.3 bits (72), Expect = 1.1 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 2/117 (1%) Frame = +1 Query: 79 GLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPE 258 G + FP P++P +SPG P A ++V++ER+ R R Sbjct: 1742 GTQLAFPPRPYNP--ASMSPGHPTHL-------------AAANSVSAERE-RERERDRER 1785 Query: 259 DQEGRPDARELDAALRQEAQAHGGEPDVGRSRHA--QRGRPSTRDIVRSGREVLRRQ 423 D+E + RE + +E + P R Q GRP + VRS +R Q Sbjct: 1786 DREREKEQRERERDRERERERLAAAPSDHYLRPVSEQPGRPGSHGFVRSPSPSVRAQ 1842
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 32.3 bits (72), Expect = 1.1 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Frame = +1 Query: 73 PAGLRPPF--PQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHR 246 P G PP P PH D EL P+ G G R +R G+ +R HR Sbjct: 1701 PPGSEPPRRPPPAPHDGDRKELPREQPLP--PGPIGTERSQRTDRGTEPGP---IRPSHR 1755 Query: 247 PGPEDQEGRPD 279 PGP Q G D Sbjct: 1756 PGPPVQFGTSD 1766
>IF2_SILPO (Q5LWL4) Translation initiation factor IF-2| Length = 835 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 3/99 (3%) Frame = +1 Query: 187 RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRS---RH 357 +REA+ A A ER+ R + E ++ + R + A +E Q E + R+ Sbjct: 94 QREAEEKARAEERERRRAEQEAKEREQREAEQRAREKAEEEERQRREAEEEAKRAAVRAA 153 Query: 358 AQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQ 474 A++ P R +G D DR +R Q Sbjct: 154 AEQEAPKAERSAERAPAAARPEGGDNARRTTDRDREREQ 192
>RL28_MOUSE (P41105) 60S ribosomal protein L28| Length = 136 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 107 HTIQMRPSYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRT-KKDDLMR 283 + ++ R S+ GL V + DG+ +V + R+G+ P T VR T K+ Sbjct: 29 NNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVRTTINKNARAT 88 Query: 284 ASSMRRYGRKHK 319 SS+R RK+K Sbjct: 89 LSSIRHMIRKNK 100
>RL28_HUMAN (P46779) 60S ribosomal protein L28| Length = 136 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 107 HTIQMRPSYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRT-KKDDLMR 283 + ++ R S+ GL V + DG+ +V + R+G+ P T VR T K+ Sbjct: 29 NNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARAT 88 Query: 284 ASSMRRYGRKHK 319 SS+R RK+K Sbjct: 89 LSSIRHMIRKNK 100
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 28.5 bits (62), Expect(2) = 1.2 Identities = 21/65 (32%), Positives = 29/65 (44%) Frame = +1 Query: 178 LRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRH 357 +R RRE +G+ S RQ+ A H P + R + R DA GG D R Sbjct: 43 MRERREEEGNEQRSPRQI-AHHPRSPRGSDRRAEPRRRDAG--------GGGGDKYRPAK 93 Query: 358 AQRGR 372 A++ R Sbjct: 94 ARKQR 98 Score = 22.3 bits (46), Expect(2) = 1.2 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = +3 Query: 138 RRACTTSPRPMWPPPATARGRW 203 R A + SPRP P PA W Sbjct: 7 RDARSPSPRPRSPSPAAPSRSW 28
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 32.0 bits (71), Expect = 1.5 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 346 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 468 R R A RGR +R RS + ++GDD+R ++DR +R Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 32.0 bits (71), Expect = 1.5 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 346 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 468 R R A RGR +R RS + ++GDD+R ++DR +R Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 32.0 bits (71), Expect = 1.5 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 346 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 468 R R A RGR +R RS + ++GDD+R ++DR +R Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 32.0 bits (71), Expect = 1.5 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 346 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 468 R R A RGR +R RS + ++GDD+R ++DR +R Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49
>TSSC4_MOUSE (Q9JHE7) Protein TSSC4| Length = 317 Score = 32.0 bits (71), Expect = 1.5 Identities = 22/87 (25%), Positives = 35/87 (40%) Frame = +1 Query: 7 QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRR 186 +A Q +R+ R+ ++ P F Q+P E + PVR + + R Sbjct: 169 EASEQSNRDAALAFLSSRSQVSHTDYVPSFNQDPSSCGEGRVVFTKPVRDSEARAERKRV 228 Query: 187 RREADGSAVASERQVRAGHRPGPEDQE 267 ++ GS E V H GPE +E Sbjct: 229 LKKGVGSGAGGEAAVELAHLAGPEAEE 255
>CAR10_MOUSE (P58660) Caspase recruitment domain-containing protein 10| (Bcl10-interacting MAGUK protein 1) (Bimp1) Length = 1021 Score = 32.0 bits (71), Expect = 1.5 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 148 VRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQ 318 V R++ +C LLRR R G PG E++E PD +L + LR E Q Sbjct: 241 VSRLEEECALLRRAR---------------GPPPGAEEKEREPDGADLLSELRAENQ 282
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 32.0 bits (71), Expect = 1.5 Identities = 44/168 (26%), Positives = 63/168 (37%), Gaps = 6/168 (3%) Frame = +1 Query: 82 LRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPED 261 +RP P PD T +P PVR + + R +ADG ++++ R R PE Sbjct: 203 VRPATPDASAVPDGTSSAPTLPVRSAEPSDTVERADADADGDDDDAQQRRRKKKRRQPEA 262 Query: 262 QE------GRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQ 423 RPD A +Q+ Q + + R A RP + R +R+ Sbjct: 263 VVPQVRVISRPDPA---AVAQQQMQQQAAQ----QQREAGGYRPGGQRPEGGYRPEGQRE 315 Query: 424 GDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHRGWLAG*P*PLWG 567 G R Q R P + GG GP+ G+ G P P G Sbjct: 316 G-GYRPEGQREGGYRPGGAPRPE-GGYRPGGPRPEGGYRPGAPRPEGG 361
>PP16A_MOUSE (Q923M0) Protein phosphatase 1 regulatory subunit 16A (Myosin| phosphatase targeting subunit 3) Length = 524 Score = 31.6 bits (70), Expect = 1.9 Identities = 32/98 (32%), Positives = 39/98 (39%), Gaps = 19/98 (19%) Frame = +1 Query: 154 RVQG-QCGLLRRRREADGSAVASERQVRAGHR-----------------PGPEDQEGRPD 279 R QG Q LLRRR + GS R+V HR P P E D Sbjct: 326 RAQGRQRSLLRRRTSSAGSRGKVVRRVSLTHRTNLYRKEHAQEAIVWQQPPPTSPEPLED 385 Query: 280 A-RELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDI 390 R+ DA LR + G P+V R + Q G P R + Sbjct: 386 EDRQTDAELRLQPPEDDG-PEVARPHNGQVGAPPGRHL 422
>MECP2_MACFA (Q95LG8) Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2)| Length = 486 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/140 (22%), Positives = 48/140 (34%) Frame = +1 Query: 1 AQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLL 180 A ++EH HH + AP L PP P P P+ +E P P + Sbjct: 358 ASSPPKKEHHHH---HHHSESPKAPVPLLPPLPPPPPEPESSE-DPTSPPEPQDLSSSVC 413 Query: 181 RRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHA 360 + + G ++ S+ G + + AA E H GE + + Sbjct: 414 KEEKMPRGGSLESD---------GCPKEPAKTQPAVATAATAAEKYKHRGEGERKDIVSS 464 Query: 361 QRGRPSTRDIVRSGREVLRR 420 RP+ + V S V R Sbjct: 465 SMPRPNREEPVDSRTPVTER 484
>MECP2_HUMAN (P51608) Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2)| Length = 486 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/140 (22%), Positives = 48/140 (34%) Frame = +1 Query: 1 AQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLL 180 A ++EH HH + AP L PP P P P+ +E P P + Sbjct: 358 ASSPPKKEHHHH---HHHSESPKAPVPLLPPLPPPPPEPESSE-DPTSPPEPQDLSSSVC 413 Query: 181 RRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHA 360 + + G ++ S+ G + + AA E H GE + + Sbjct: 414 KEEKMPRGGSLESD---------GCPKEPAKTQPAVATAATAAEKYKHRGEGERKDIVSS 464 Query: 361 QRGRPSTRDIVRSGREVLRR 420 RP+ + V S V R Sbjct: 465 SMPRPNREEPVDSRTPVTER 484
>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556| Length = 395 Score = 31.2 bits (69), Expect = 2.5 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 1/99 (1%) Frame = +1 Query: 7 QAGRQEHREP*RGHHRLRAHLAPAGLRPPFP-QEPHHPDETELSPGGPVRRVQGQCGLLR 183 + GRQ R P RL+ L LRP + H + + P R V G G + Sbjct: 137 ERGRQLRRRPLHARQRLQLLLRALALRPGQQLRRDQHLQQVQRVVHRPRREVHG--GGQQ 194 Query: 184 RRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAA 300 RR+ A A +R++ PG Q R R ++ A Sbjct: 195 RRQAASVGVPAQQRRLAVHPVPGQLRQPARRYPRHINGA 233
>NANR_SHIFL (P0A8W1) Transcriptional regulator nanR| Length = 263 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +1 Query: 175 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 354 ++RRR +G + SER++ A GRP RE AAL+++ G + Sbjct: 43 MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91 Query: 355 HAQRGRPSTRDIV 393 A+ RPS I+ Sbjct: 92 RARVSRPSADTII 104
>NANR_ECOLI (P0A8W0) Transcriptional regulator nanR| Length = 263 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +1 Query: 175 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 354 ++RRR +G + SER++ A GRP RE AAL+++ G + Sbjct: 43 MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91 Query: 355 HAQRGRPSTRDIV 393 A+ RPS I+ Sbjct: 92 RARVSRPSADTII 104
>NANR_ECOL6 (Q8FD57) Transcriptional regulator nanR| Length = 263 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +1 Query: 175 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 354 ++RRR +G + SER++ A GRP RE AAL+++ G + Sbjct: 43 MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91 Query: 355 HAQRGRPSTRDIV 393 A+ RPS I+ Sbjct: 92 RARVSRPSADTII 104
>NANR_ECO57 (Q8X4W4) Transcriptional regulator nanR| Length = 263 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +1 Query: 175 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 354 ++RRR +G + SER++ A GRP RE AAL+++ G + Sbjct: 43 MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91 Query: 355 HAQRGRPSTRDIV 393 A+ RPS I+ Sbjct: 92 RARVSRPSADTII 104
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +1 Query: 187 RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 366 R + G + VRAG RP P + P R AA+ A GR+ ++R Sbjct: 260 RYRSGGPFADAVAAVRAGRRP-PRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRR 318 Query: 367 GRPST 381 RP+T Sbjct: 319 SRPAT 323
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +1 Query: 187 RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 366 R + G + VRAG RP P + P R AA+ A GR+ ++R Sbjct: 260 RYRSGGPFADAVAAVRAGRRP-PRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRR 318 Query: 367 GRPST 381 RP+T Sbjct: 319 SRPAT 323
>BEGIN_MOUSE (Q68EF6) Brain-enriched guanylate kinase-associated protein| Length = 600 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/70 (31%), Positives = 27/70 (38%) Frame = +2 Query: 128 SYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRTKKDDLMRASSMRRYG 307 S P D AS GDG+R VQL C G+ P + + SSM Sbjct: 508 SLSPSRSADALAGYAASDGDGDRLRVQL------CGAGSSPEPEHGSRESLEPSSMEASP 561 Query: 308 RKHKPTVANP 337 H PT +P Sbjct: 562 EMHPPTRLSP 571
>UVRC_WOLSU (Q7M8K0) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 602 Score = 31.2 bits (69), Expect = 2.5 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 12/117 (10%) Frame = +1 Query: 127 ELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALR 306 E G V +G C RR +G S+ + G R D+E PD LD L Sbjct: 406 EACVGAMVVYEEGFCKESYRRYALEGRDEYSQMREMLGRRAEAFDRESPPDLWLLDGGLG 465 Query: 307 QEAQAHGGEPDVGRS------------RHAQRGRPSTRDIVRSGREVLRRQGDDQRL 441 Q A +G + A R + + +DI+R+ E +R D+RL Sbjct: 466 QIRLAQEIIESLGANVEIIAIAKEKIDAKAHRAKGAAKDILRTPTEEIRLLPSDKRL 522
>U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF65) Length = 496 Score = 31.2 bits (69), Expect = 2.5 Identities = 31/107 (28%), Positives = 44/107 (41%) Frame = +1 Query: 217 SERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVR 396 ++R+ R R D R +R+ R E + GG D RSR +R R Sbjct: 56 NDRKKRKRSRSRDRDTRRRSRSRD-----RGERRGGGGGGDRDRSRSRERRRGG------ 104 Query: 397 SGREVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHRGW 537 GR+ RR+G D D A R +P P R P+++R W Sbjct: 105 GGRDEPRRRGGD------DEARSRREPEPQKP------REPKKYRFW 139
>TSSC4_RAT (Q5XIB1) Protein TSSC4| Length = 317 Score = 31.2 bits (69), Expect = 2.5 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 6/133 (4%) Frame = +1 Query: 7 QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRR 186 + Q +R+ R+ +P P F Q+P E + PVR + + R Sbjct: 169 ETSEQSNRDAALAFLSSRSQASPTDYVPFFNQDPSSCGEGRVVFTKPVRGSEARAERKRV 228 Query: 187 RREADGSAVASERQVRAGHRPGPEDQE-----GRPDARELDAALRQEAQAHG-GEPDVGR 348 ++ S E V H GPE +E G+P+ A R E+ + G VG Sbjct: 229 LKKGVVSGAGGEASVELAHLAGPEAEEWSGHQGQPEVVVPSEAARPESSSGPIGMKTVGF 288 Query: 349 SRHAQRGRPSTRD 387 +R R R+ Sbjct: 289 HGSKKRSRDHFRN 301
>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)| Length = 704 Score = 30.8 bits (68), Expect = 3.3 Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 19/99 (19%) Frame = +1 Query: 70 APAGLR---PPFPQEPHHPDETELSPGGPVRRVQGQ-----------CGLLRRRREA--- 198 APA ++ PP P +P P + SPG P R Q G + RE Sbjct: 284 APASMQSPAPPQPGQPGPPGGSRPSPG-PTGRFPDQRPEVAPSDPDYTGAAAQPREERTG 342 Query: 199 --DGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQ 309 G + A R+ RAGH PG Q + + A+ RQ Sbjct: 343 GIGGYSAAGTREDRAGHPPGSYTQASAAAPQPVVASARQ 381
>KIF1C_RAT (O35787) Kinesin-like protein KIF1C (Kinesin-like protein KIF1D)| Length = 1097 Score = 30.8 bits (68), Expect = 3.3 Identities = 23/88 (26%), Positives = 30/88 (34%), Gaps = 11/88 (12%) Frame = +1 Query: 73 PAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPG 252 P RPP P+ PH P L G R + R ++ + Q RPG Sbjct: 1010 PPNRRPPSPRRPHRPRRNSLDGGSRSRGGGSTQPEPQHLRPQKHNSYPQQPQPYPAQRPG 1069 Query: 253 P-----------EDQEGRPDARELDAAL 303 P Q PD +E AA+ Sbjct: 1070 PRYPPYTTPPRMRRQRSAPDLKESGAAV 1097
>Y748_CAUCR (Q9AA58) UPF0209 protein CC0748| Length = 591 Score = 30.8 bits (68), Expect = 3.3 Identities = 48/175 (27%), Positives = 64/175 (36%), Gaps = 11/175 (6%) Frame = +1 Query: 10 AGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRR 189 AG + + P G R R G+RP Q P ET GG + L R Sbjct: 210 AGFEIAKRPGFGRKRERLEAWRPGVRP-VAQRP----ETLAIIGGGI----AGAALARAA 260 Query: 190 REA--------DGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVG 345 R A D AVA+ A P D G P A AL + + +PD Sbjct: 261 RAAGLEVTVIDDADAVAASGNPAALVTPAL-DAGGGPRAALYAQALSRAVTLYEAQPDAV 319 Query: 346 RSRHAQRGRPSTRDIVRSGR---EVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGG 501 +R + RD R + L GD + L A+D A+ P PA+ + G Sbjct: 320 LAREVLQLAAGERDPARFATVADQDLFEPGDMRTLEAEDTRARLETPTPALAMAG 374
>RL28_RAT (P17702) 60S ribosomal protein L28| Length = 136 Score = 30.8 bits (68), Expect = 3.3 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 107 HTIQMRPSYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRT-KKDDLMR 283 + ++ R S+ GL V + DG+ +V + R+G+ P T VR T K+ Sbjct: 29 NNLKARNSFRYNGLIHRKTVGVEAWPDGKGVVVVMKRRSGQRKPATSYVRTTINKNARAT 88 Query: 284 ASSMRRYGRKHK 319 SS+R RK+K Sbjct: 89 LSSIRHMIRKNK 100
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 30.8 bits (68), Expect = 3.3 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +1 Query: 34 P*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 177 P G +++ P+ L PP P +HP PGGP + G G+ Sbjct: 559 PGMGMNQMLPPQQPSHLGPPHPNMMNHPHHPHHHPGGPPPHMMGGPGM 606
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.4 bits (67), Expect = 4.3 Identities = 16/47 (34%), Positives = 19/47 (40%) Frame = +1 Query: 13 GRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVR 153 G E P + + H A RPP P+ HHP L GG R Sbjct: 995 GSGEAPTPLQPPEEVTPHPATPARRPPSPRRSHHPRRNSLDGGGRSR 1041
>Y1326_CAUCR (Q9A8M7) Hypothetical RNA methyltransferase CC1326 (EC 2.1.1.-)| Length = 415 Score = 30.4 bits (67), Expect = 4.3 Identities = 31/110 (28%), Positives = 42/110 (38%) Frame = -3 Query: 583 QSCVVVPIEVRANLPASLDAVEVLAEGAPQDPQLGQAELVGLLDLGLPNVDRRLGAVVLL 404 + C V + A LPA E E P L LD+ + V+R+ G L Sbjct: 145 EECPVTDPRLVAALPALARLAEPFLEHPKSAPTLHVTLTATGLDIDITGVERKSGG---L 201 Query: 403 ALNVRYRVLMAALVEHGEIDRHRVRHRGLVLPAVAPHRARAHQVVLLGPP 254 + + R R MAA GE D RV G + + Q V+ PP Sbjct: 202 SADARMRAAMAA----GEGDFARVTLAGETIYGARQPLVKLGQAVVALPP 247
>VE2_HPV15 (P36784) Regulatory protein E2| Length = 382 Score = 30.4 bits (67), Expect = 4.3 Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Frame = +1 Query: 193 EADGSAVASERQVRAGHRPGPEDQEGRPDARELDAAL----RQEAQAHGGEPDVGRSRHA 360 E+ + S V + R P + R + +E RQ+ Q E RSR Sbjct: 143 ESPANRQLSSTSVSSRKRTPPRTEARRYNRKESSPTTTTTRRQKRQGQRQEDTARRSRST 202 Query: 361 QRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGP 519 RGR ++I R G + RR+ + + PA GG RRGP Sbjct: 203 SRGR---QEISRGGNQRRRRRSRETSIS------------PAWGRGGRSRRGP 240
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 30.0 bits (66), Expect = 5.6 Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 21/98 (21%) Frame = +1 Query: 205 SAVASERQVRAGHRPGPEDQEGRPDAR---------------------ELDAALRQEAQA 321 S+ SER ++ HR + G PD R E +A R+EA+ Sbjct: 205 SSKTSERAQKSEHRESKKSHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEE 264 Query: 322 HGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQ 435 E + GRS GR RS R R + D+ Sbjct: 265 KSRERERGRSSGTHSGRHRGHSDGRSHRSRSRSRSPDK 302
>M1200_ARATH (P92550) Hypothetical mitochondrial protein AtMg01200 (ORF294)| Length = 294 Score = 30.0 bits (66), Expect = 5.6 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 2/119 (1%) Frame = +1 Query: 91 PFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEG 270 PFP EP PD +SP P+ + + ++++ R E++ Sbjct: 159 PFPAEPGSPD--PVSPPPPIASFYSRIERAESLHAGNIELAEDLQRIQEMER-NLENERS 215 Query: 271 RPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSG--REVLRRQGDDQRL 441 REL A + E + G+ V R+R R + DI R G +E++R+Q ++ RL Sbjct: 216 PYRGRELAARIDWEVRELEGK--VARNRAWDMVRDAQLDIWRQGLDQELVRQQENESRL 272
>CAR10_HUMAN (Q9BWT7) Caspase recruitment domain-containing protein 10| (CARD-containing MAGUK protein 3) (Carma 3) Length = 1032 Score = 30.0 bits (66), Expect = 5.6 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Frame = +1 Query: 148 VRRVQGQCGLLRRRREADGSAVASERQVRAGHRPG---------PEDQEGRPDARELDAA 300 V R++ +C LLRR R A E++ P E+Q+ REL Sbjct: 241 VSRLEEECALLRRARGPPPGAEEKEKEKEKEKEPDNVDLVSELRAENQQLTASLRELQEG 300 Query: 301 LRQEAQAHG 327 L+QEA G Sbjct: 301 LQQEASRPG 309
>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 1995 Score = 30.0 bits (66), Expect = 5.6 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Frame = +1 Query: 181 RRRREADGSAVASERQVRAGH--RPGPEDQEGRPDARELDAALRQEAQA-HGGEPDVGRS 351 R R EA+G ER+ RA R E+QE R + + ALR E +A + DVG+S Sbjct: 1488 RERAEAEGR----EREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKS 1543 Query: 352 RH 357 H Sbjct: 1544 VH 1545
>CATA2_MAIZE (P12365) Catalase isozyme 2 (EC 1.11.1.6)| Length = 491 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 13/71 (18%) Frame = -3 Query: 385 RVLMAALVEHGEIDRHRVRHRGLVLPAVAPHRA-------------RAHQVVLLGPPDRD 245 ++L + + + RHR+ L+LPA AP A H+ V P D Sbjct: 338 KLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCAHHNNHYDGSMNFMHRHEEVDYFPSRYD 397 Query: 244 GARRAPAVPMP 212 R AP P+P Sbjct: 398 AVRNAPRYPIP 408
>FBXL6_MOUSE (Q9QXW0) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat| protein 6) (F-box protein FBL6) Length = 535 Score = 30.0 bits (66), Expect = 5.6 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Frame = -3 Query: 319 LVLPAVAPHRARAHQVVLLGPPDRDGARRAPAVPMPQLNHRP-------LAVAGGGHIGL 161 LVLP + P RARAH+ P R AR AV P+ RP L G I L Sbjct: 51 LVLPDLEPPRARAHRRARRRAP-RSLARGPTAVAKPRTKPRPEPSLDQGLDSGWGDRIPL 109 Query: 160 GLVVQALRVIARSH 119 ++V ++ +H Sbjct: 110 EVLVHIFGLLVAAH 123
>RHSB_ECOLI (P16917) Protein rhsB precursor| Length = 1411 Score = 29.6 bits (65), Expect = 7.3 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Frame = +1 Query: 4 QQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLR 183 + GR E R R+ L PAGL + E T+ V QG+ GL R Sbjct: 350 RHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKR 409 Query: 184 --RRREADGSAVASE 222 ++ ADGS S+ Sbjct: 410 VVKKEHADGSVTQSQ 424
>RHSA_ECOLI (P16916) Protein rhsA precursor| Length = 1377 Score = 29.6 bits (65), Expect = 7.3 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Frame = +1 Query: 4 QQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLR 183 + GR E R R+ L PAGL + E T+ V QG+ GL R Sbjct: 350 RHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKR 409 Query: 184 --RRREADGSAVASE 222 ++ ADGS S+ Sbjct: 410 VVKKEHADGSVTQSQ 424
>MAON_SOLTU (P37225) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial| precursor (EC 1.1.1.39) (NAD-ME) Length = 601 Score = 29.6 bits (65), Expect = 7.3 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 244 GARRAPAVPMPQLNHRPLAVAGGGHIGLGLVVQALRVIAR 125 G RA P+ ++ + V G G GLG++ AL+ ++R Sbjct: 309 GTVRAQGRPLTDFANQKIVVVGAGSAGLGVLKMALQAVSR 348
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 29.6 bits (65), Expect = 7.3 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%) Frame = +1 Query: 250 GPEDQEGRPDARELDAALRQEAQAH----GGEPDVGRSRHAQR-GRPSTRD-----IVRS 399 GP P AR+L AAL EA+ H GG+ ++ A R RP+T D ++ Sbjct: 41 GPSSSIEPPVARKLRAAL--EAEGHLPGAGGDKTAAQASPAPRPPRPATADGSGAPKPQA 98 Query: 400 GREVLRRQGDDQRLGAQDRAAQRVQPVPAVD 492 V RQ ++ ++ AA++V A D Sbjct: 99 PMSVAERQAAAEKAASEKAAAEKVAASEAAD 129
>CH10_PROMM (Q7TUS3) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 103 Score = 29.6 bits (65), Expect = 7.3 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%) Frame = -3 Query: 322 GLVLPAVAPHRARAHQVVLLGPPDR--DGARRAPAV 221 G++LP A + + +VV +GP R DG+R+AP V Sbjct: 32 GILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEV 67
>YNP1_CAEEL (P34554) Hypothetical protein T05G5.1 precursor| Length = 411 Score = 29.6 bits (65), Expect = 7.3 Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 9/110 (8%) Frame = +1 Query: 148 VRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARE---------LDAA 300 ++ Q Q + RR D ERQV R ED+E D + Sbjct: 90 IQHQQSQADIDDARRRDDERKREYERQVAERTRKEKEDRERASDEERRRQQHEQYWKEET 149 Query: 301 LRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQ 450 R+E Q E + R R + RS E RR+ + +RL AQ Sbjct: 150 ARREQQRAEAERRIQEQRVRDDERRRQHEAERSQIEERRREEESRRLAAQ 199
>LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CGI-74 homolog)| Length = 392 Score = 29.6 bits (65), Expect = 7.3 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 4/97 (4%) Frame = +1 Query: 178 LRRRREADGSAVASERQVRAGHRPGPEDQEG----RPDARELDAALRQEAQAHGGEPDVG 345 LRR R + S + HR +E R +RE R + + Sbjct: 258 LRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQ 317 Query: 346 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDR 456 RSRH+ R R R RS +E R DQ L ++DR Sbjct: 318 RSRHSSRDRSRERSKRRSSKERFR----DQDLASRDR 350
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 29.6 bits (65), Expect = 7.3 Identities = 36/156 (23%), Positives = 54/156 (34%), Gaps = 7/156 (4%) Frame = +1 Query: 85 RPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREAD----GSAVASERQVRAG---H 243 RPP P P HP SP P++ + G G A G ++AG Sbjct: 810 RPPSPHPPPHP-----SPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 864 Query: 244 RPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQ 423 PGP G P + QA G H P+++ ++S ++ Sbjct: 865 HPGPPQPFGLPPQ-------ASQGQAPLGTSPAAAYPHTSLQLPASQSALQS-----QQP 912 Query: 424 GDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHR 531 +Q L A ++P P + L PQ H+ Sbjct: 913 PREQPLPPAPLAMPHIKPPPTTPIPQL--PAPQAHK 946
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 29.6 bits (65), Expect = 7.3 Identities = 42/164 (25%), Positives = 54/164 (32%), Gaps = 4/164 (2%) Frame = +1 Query: 1 AQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLL 180 A QA + P RG PAG RP P+ PGGP QG Sbjct: 268 AAQAREERAERPDRGPR-------PAGARPAGPR-----------PGGPR---QGDS--- 303 Query: 181 RRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEP--DVGRSR 354 R DG RP P RP A Q AQA P D + Sbjct: 304 ---RPGDG-------------RPAPRSGAPRPGGARPAAGFGQPAQAENSSPFADGQSKK 347 Query: 355 HAQRGRPSTR--DIVRSGREVLRRQGDDQRLGAQDRAAQRVQPV 480 Q+GR + D G+++ G + G + + +PV Sbjct: 348 KRQKGRRTVEFGDKGAGGKKMREDVGGNWNRGKKGKRKPETKPV 391 Score = 29.3 bits (64), Expect = 9.6 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 1/115 (0%) Frame = +1 Query: 142 GPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDAR-ELDAALRQEAQ 318 G RR G ++ RRR A + R+ A + +P+A+ AA +EA Sbjct: 57 GDARRKDGASDVIIRRRRKGSGAKPAAREEAAPAETEAQASPAQPEAKAAAPAAEAEEAP 116 Query: 319 AHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQPVP 483 A P R A+ P R I+R Q +++ A + AA QP P Sbjct: 117 AAKPAPAKARKAEARTEAPRAR-IIRPATP----QAEEKAEPAPETAAP-AQPAP 165
>YAV1_XANCV (P14727) Hypothetical 122 kDa avirulence protein in avrBs3 region| Length = 1164 Score = 29.3 bits (64), Expect = 9.6 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = +2 Query: 134 HPEGLYDESKANVASSGDGERPMVQLWHRNG----RCAPGTVPVRRTKKDDLMRASSMRR 301 HP +D++ S G ++QL+ R G GT+P + D +++AS M+R Sbjct: 966 HPAQAFDDAMTQFGMSRHG---LLQLFRRVGVTELEARSGTLPPASQRWDRILQASGMKR 1022 Query: 302 YGRKHKPTVANPMSVDLAMLN 364 KP+ + + D A L+ Sbjct: 1023 ----AKPSPTSTQTPDQASLH 1039
>KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C| Length = 1100 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/89 (25%), Positives = 29/89 (32%), Gaps = 11/89 (12%) Frame = +1 Query: 70 APAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRP 249 AP RPP P+ PH L G R + R + + Q RP Sbjct: 1012 APPNRRPPSPRRPHRSRRNSLDGGSRSRGGGSTQPEPQHLRPQKHNGYPQQPQPSPAQRP 1071 Query: 250 GP-----------EDQEGRPDARELDAAL 303 GP Q PD +E AA+ Sbjct: 1072 GPRYPPYTTPPRMRRQRSAPDLKESGAAV 1100
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 9.6 Identities = 40/166 (24%), Positives = 59/166 (35%), Gaps = 21/166 (12%) Frame = +1 Query: 88 PPFPQEPHHPDETELSP-----------GGPVRRVQGQCGLLRRRREADGSAVASERQVR 234 PP P P P + P GGP R + G RRR E +A A + Sbjct: 282 PPLPPPPPPPPPPQPPPAGGSARRRRRGGGPPGRGGRRRGGKRRRAEGTEAAAADAEEEE 341 Query: 235 AGHRPGPEDQE-GRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSG--- 402 G ED++ + RE + A GE + R R + + + +G Sbjct: 342 DGDGDEDEDEDRAEGEGREDGGEGPRGAGGGAGESESESGRAEGAPRSAEQQVGVAGVLG 401 Query: 403 ----REVLRRQGDDQRLGAQDRAAQR--VQPVPAVDLGGLLRRGPQ 522 R+ L G ++ G AA + VP + G RGP+ Sbjct: 402 LLVVRDGLHLDGPERAAGPAVAAADADDLHRVPVLAGAGPGARGPR 447
>TCP10_HUMAN (Q12799) T-complex protein 10A homolog| Length = 416 Score = 29.3 bits (64), Expect = 9.6 Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 10/154 (6%) Frame = +1 Query: 82 LRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSA------VASERQVRAGH 243 L P F + H + + +P R+ Q LL +R ++ A + +ER + +G Sbjct: 122 LEPAFGKISHLSADEDTTPKYAGRKSQSAT-LLGQRWSSNHLAPPKPMSLKTER-INSGK 179 Query: 244 RPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQ 423 P ED+E P R D + + G G S + PS+R SG Q Sbjct: 180 TPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQ 239 Query: 424 GDD----QRLGAQDRAAQRVQPVPAVDLGGLLRR 513 Q A R A R V GG L R Sbjct: 240 ASQATTLQEQTAAARGADRSSSVLGSSEGGFLSR 273
>PODJ_CAUCR (Q9ZG88) Localization factor podJL (Polar organelle development| protein) [Contains: Localization factor podJS] Length = 974 Score = 29.3 bits (64), Expect = 9.6 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +1 Query: 253 PEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRP-STRDIVRSGREVLRRQGD 429 PE+ D + E+ + EP+V A+ RP STRDI+ R R Sbjct: 537 PEEPAFAHDDYAIADGFEPESPRYEVEPEVSDFAPAEPSRPMSTRDIIEQARAAARAAAA 596 Query: 430 DQRLGAQDRAAQR 468 + G + ++A++ Sbjct: 597 SEGKGGKAKSAKK 609
>INVO_TARBA (P24711) Involucrin| Length = 387 Score = 29.3 bits (64), Expect = 9.6 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 4/137 (2%) Frame = +1 Query: 100 QEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRP----GPEDQE 267 ++ P E E+ PG ++ Q Q L +++E G V +Q + G + QE Sbjct: 84 RKQQEPQEQEVHPGKQQQKPQEQEAHLGKKQEPQGQEVHLGKQQQKTQEQEVHLGKQQQE 143 Query: 268 GRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGA 447 + L+ L++ + H + + H ++ + G++ Q + LG Sbjct: 144 LQEQEVHLEKQLQEPQEVHLEKQLQEQEVHLEKQLQEPEPELNLGKQQQEPQEQEAYLGK 203 Query: 448 QDRAAQRVQPVPAVDLG 498 Q + Q P + LG Sbjct: 204 QQQELPEPQD-PELHLG 219
>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25| Length = 561 Score = 29.3 bits (64), Expect = 9.6 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 1/109 (0%) Frame = +1 Query: 151 RRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGG 330 RR + + G RRRE + S G+R ++ R +RE R + Sbjct: 205 RRRRRRDGERTRRRERNRDPSPSVSDDDRGYRQSSREERDRKSSREEGGRSRSRDRYRNR 264 Query: 331 EPDVGRSR-HAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQ 474 + R R +R R +R+ +RS R+ R D R +DR VQ Sbjct: 265 SRERYRDRSREERSRDRSRERLRSRRD---RDRDRDRDRDRDRDRDNVQ 310
>FIBG_BOVIN (P12799) Fibrinogen gamma-B chain precursor (Gamma')| Length = 444 Score = 29.3 bits (64), Expect = 9.6 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Frame = +2 Query: 377 QHAISYV---QGEKYYGAKATINVWEPKIEQPNE-FSLSQLWILGGSFGEDLNSIEAGWQ 544 Q +I YV Q E + G +T + K+ N+ + L+ + +GG G+ + + G Sbjct: 264 QSSIPYVLRIQLEDWNGRTSTADYASFKVTGENDKYRLTYAYFIGGDAGDAFDGYDFGDD 323 Query: 545 VSPDLYGDNNTRLFTYWD 598 S + +N F+ WD Sbjct: 324 SSDKFFTSHNGMQFSTWD 341
>CH10_SYNP7 (P22880) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 103 Score = 29.3 bits (64), Expect = 9.6 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%) Frame = -3 Query: 322 GLVLPAVAPHRARAHQVVLLGPPDR--DGARRAPAV 221 G++LP A + + ++V +GP R DG+R+AP V Sbjct: 32 GIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEV 67
>CH10_SYNP6 (P07889) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 103 Score = 29.3 bits (64), Expect = 9.6 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%) Frame = -3 Query: 322 GLVLPAVAPHRARAHQVVLLGPPDR--DGARRAPAV 221 G++LP A + + ++V +GP R DG+R+AP V Sbjct: 32 GIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEV 67
>CH10_MYCLE (P24301) 10 kDa chaperonin (Protein Cpn10) (groES protein) (10 kDa| antigen) Length = 99 Score = 29.3 bits (64), Expect = 9.6 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = -3 Query: 367 LVEHGEIDRHRVRHRGLVLPAVAPHRARAHQVVLLGPP--DRDGARRAP 227 LV+ GE + + GLV+P A + + VV +GP D DGA+R P Sbjct: 13 LVQAGEAET--MTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIP 59
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 29.3 bits (64), Expect = 9.6 Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 9/90 (10%) Frame = +1 Query: 139 GGPVRRVQGQCGLLRRRREADG--SAVASERQVRAGHRPGPEDQEGRPDARELDAALRQE 312 G P RR + G R R A R+ RA RPG +EG D E A R+ Sbjct: 927 GDPHRRHVHRQGGSRESRSGSPRTGADGEHRRHRAHRRPG---EEGPEDKAERRARHREG 983 Query: 313 AQ-AHGGE-----PDVGRSRHAQR-GRPST 381 ++ A GGE PD G R R G P+T Sbjct: 984 SRPARGGEGEGEGPDGGERRRRHRHGAPAT 1013
>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)| Length = 1244 Score = 29.3 bits (64), Expect = 9.6 Identities = 24/94 (25%), Positives = 34/94 (36%) Frame = +1 Query: 61 AHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAG 240 +H L PP P PH PD + L +Q L +G A A AG Sbjct: 947 SHSPSPSLPPPPPSPPHRPD-SPLFNSRCSSPLQLNLLQLEESPRTEGGAAAGGPGSSAG 1005 Query: 241 HRPGPEDQEGRPDARELDAALRQEAQAHGGEPDV 342 P P ++ P+ R ++ A G D+ Sbjct: 1006 PLP-PSEESAEPEPRLVEVTESSNQDALSGSSDL 1038
>IF2_STRAG (P0A3K7) Translation initiation factor IF-2| Length = 927 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Frame = +1 Query: 145 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 324 PV + + Q + REA A A +RQ HR + R D R R + Sbjct: 90 PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149 Query: 325 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 411 +R+ GR P TR +G + Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185
>IF2_STRA5 (Q8E1H3) Translation initiation factor IF-2| Length = 927 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Frame = +1 Query: 145 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 324 PV + + Q + REA A A +RQ HR + R D R R + Sbjct: 90 PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149 Query: 325 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 411 +R+ GR P TR +G + Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185
>IF2_STRA3 (P0A3K6) Translation initiation factor IF-2| Length = 927 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Frame = +1 Query: 145 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 324 PV + + Q + REA A A +RQ HR + R D R R + Sbjct: 90 PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149 Query: 325 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 411 +R+ GR P TR +G + Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185
>IF2_STRA1 (Q3K302) Translation initiation factor IF-2| Length = 927 Score = 29.3 bits (64), Expect = 9.6 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Frame = +1 Query: 145 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 324 PV + + Q + REA A A +RQ HR + R D R R + Sbjct: 90 PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149 Query: 325 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 411 +R+ GR P TR +G + Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185
>ADA2A_HUMAN (P08913) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2 adrenergic receptor subtype C10) Length = 450 Score = 29.3 bits (64), Expect = 9.6 Identities = 30/113 (26%), Positives = 35/113 (30%), Gaps = 1/113 (0%) Frame = +1 Query: 85 RPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQ 264 R P PD PGG RR GL R G A A + PG Sbjct: 226 RTRVPPSRRGPDAVAAPPGGTERRPN---GLGPERSAGPGGAEAEPLPTQLNGAPGEPAP 282 Query: 265 EGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTR-DIVRSGREVLRR 420 G D LD + P R RG+ R V+ G + RR Sbjct: 283 AGPRDTDALDLEESSSSDHAERPPGPRRPERGPRGKGKARASQVKPGDSLPRR 335
>ZN213_HUMAN (O14771) Zinc finger protein 213 (Putative transcription factor| CR53) Length = 459 Score = 29.3 bits (64), Expect = 9.6 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = -3 Query: 262 GPPDRDGARRAPAVPMPQLNH--RPLAVAGGGHIG 164 GPP GARR P+VP Q +H +P A+ G G Sbjct: 153 GPPPTVGARRRPSVPQEQHSHSAQPPALLKEGRPG 187
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 29.3 bits (64), Expect = 9.6 Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 4/124 (3%) Frame = +1 Query: 16 RQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRRE 195 RQ+H+ P H R R ++P H P RR + + R R+ Sbjct: 133 RQQHQHPRGRHASDRVQDGAHPRRQRLREQPRHAGRPRRRQ--PPRRGRSRGTHRRHLRQ 190 Query: 196 ADGSAVASERQVRAGHRPGPEDQEGR--PDARELDAALRQEAQAHGGEPDVGRSRH--AQ 363 A AV + +A GP + R P AR++ LR GEP G H + Sbjct: 191 APRPAVRGPDEDQAREFRGPRHRRERHPPTARDV---LR-------GEPGHGDGHHLEGR 240 Query: 364 RGRP 375 RGRP Sbjct: 241 RGRP 244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,108,151 Number of Sequences: 219361 Number of extensions: 2048249 Number of successful extensions: 8090 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 7529 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8047 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
