ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3b01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1934 Score = 311 bits (157), Expect = 1e-81 Identities = 367/435 (84%), Gaps = 4/435 (0%) Strand = Plus / Plus Query: 181 cggcgacggcgagaggccgatggttcagctgtggcatcggaacggcaggtgcgcgccggg 240 ||||| |||||||| ||| ||||| ||||| ||||| | | |||||||||| || || Sbjct: 544 cggcggcggcgagaagcccatggtccagctctggcaccagggcggcaggtgcccggagga 603 Query: 241 caccgtcccggtccggaggaccaagaaggacgacctgatgcgcgcgagctcgatgcggcg 300 ||||||||| ||||| | || ||| |||||||||| | || |||||||| ||||| || Sbjct: 604 caccgtcccaatccggcgtacgaagcgggacgacctgctccgggcgagctccatgcgccg 663 Query: 301 ctacggcaggaagcacaagcccacggtggcgaacccgatgtcggtcgatctcgccatgct 360 |||||||| ||||| || | ||| | | ||||| ||||| ||||| | | | |||| Sbjct: 664 ctacggcaagaagcg---gcacccggcgcccaaccccatgtccgtcgaccccaacctgct 720 Query: 361 caacgagggcggccatcaacacgcgatatcgtacgttcagggcgagaagtactacggcgc 420 ||||||||||||||| || || || || ||||||| |||||||| |||||||||||||| Sbjct: 721 caacgagggcggccaccagcatgccatcgcgtacgtccagggcgacaagtactacggcgc 780 Query: 421 caaggcgacgatcaacgtttgggagcccaagatcgagcagcccaacgagttcagcctgtc 480 |||||| || ||||| || |||| ||||||||||||||||||||||||||||||| |||| Sbjct: 781 caaggcaaccatcaatgtctgggcgcccaagatcgagcagcccaacgagttcagcttgtc 840 Query: 481 ccagctgtggatcttggggggctccttcggcgaggacctcaacagcatcgaggctggctg 540 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 841 ccagctctggatcttgggtggctccttcggcgaggacctcaacagcatcgaggctggatg 900 Query: 541 gcaggttagccctgacctctatggggacaacaacacaagactgttcacatactgggacta 600 |||||||||||| |||||||| || ||||||||||| || |||||||| |||| |||||| Sbjct: 901 gcaggttagccccgacctctacggcgacaacaacacgaggctgttcacttact-ggacta 959 Query: 601 gtgatgcgtaccagg 615 | ||||| ||||||| Sbjct: 960 gcgatgcataccagg 974 Score = 172 bits (87), Expect = 9e-40 Identities = 144/163 (88%) Strand = Plus / Plus Query: 1 gctcaacaagccggccgtcaagagcatagagagccctgacggggacatcatagactgcgt 60 ||||||||||||||| || |||||||| |||||||| || |||||||||||||| ||||| Sbjct: 376 gctcaacaagccggcggtgaagagcatcgagagcccagatggggacatcatagattgcgt 435 Query: 61 gcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccacaccatccagat 120 ||||||||| |||||||| || ||||| || || |||||||||||||||||||||||||| Sbjct: 436 gcacatctcacaccagccagctttcgatcatcccttcctcaagaaccacaccatccagat 495 Query: 121 gagaccgagctatcacccggagggcctgtacgacgagtccaag 163 ||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 496 gaggccgaactaccatcccgatggcctgtacgacgaatccaag 538
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 224 bits (113), Expect = 3e-55 Identities = 146/157 (92%) Strand = Plus / Plus Query: 390 cgtacgttcagggcgagaagtactacggcgccaaggcgacgatcaacgtttgggagccca 449 ||||||| |||||||| |||||||||||||||||||| || ||||| || |||| ||||| Sbjct: 33429059 cgtacgtccagggcgacaagtactacggcgccaaggcaaccatcaatgtctgggcgccca 33429118 Query: 450 agatcgagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcg 509 |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 33429119 agatcgagcagcccaacgagttcagcttgtcccagctctggatcttgggtggctccttcg 33429178 Query: 510 gcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||||||||||||||||||| |||||||| Sbjct: 33429179 gcgaggacctcaacagcatcgaggctggatggcaggt 33429215 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 33428466 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 33428525 Query: 90 accctttcctcaagaaccacaccatccag 118 | || |||||||||||||||||||||||| Sbjct: 33428526 atcccttcctcaagaaccacaccatccag 33428554 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 542 caggttagccctgacctctatggggacaacaacacaagactgttcacatactgg 595 ||||||||||| |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 33429407 caggttagccccgacctctacggcgacaacaacacgaggctgttcacttactgg 33429460 Score = 40.1 bits (20), Expect = 8.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 116 cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 163 |||||||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 33428642 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 33428689
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 224 bits (113), Expect = 3e-55 Identities = 146/157 (92%) Strand = Plus / Minus Query: 390 cgtacgttcagggcgagaagtactacggcgccaaggcgacgatcaacgtttgggagccca 449 ||||||| |||||||| |||||||||||||||||||| || ||||| || |||| ||||| Sbjct: 69052 cgtacgtccagggcgacaagtactacggcgccaaggcaaccatcaatgtctgggcgccca 68993 Query: 450 agatcgagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcg 509 |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 68992 agatcgagcagcccaacgagttcagcttgtcccagctctggatcttgggtggctccttcg 68933 Query: 510 gcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||||||||||||||||||| |||||||| Sbjct: 68932 gcgaggacctcaacagcatcgaggctggatggcaggt 68896 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 69645 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 69586 Query: 90 accctttcctcaagaaccacaccatccag 118 | || |||||||||||||||||||||||| Sbjct: 69585 atcccttcctcaagaaccacaccatccag 69557 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 542 caggttagccctgacctctatggggacaacaacacaagactgttcacatactgg 595 ||||||||||| |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 68704 caggttagccccgacctctacggcgacaacaacacgaggctgttcacttactgg 68651 Score = 40.1 bits (20), Expect = 8.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 116 cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 163 |||||||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 69469 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 69422
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 224 bits (113), Expect = 3e-55 Identities = 146/157 (92%) Strand = Plus / Plus Query: 390 cgtacgttcagggcgagaagtactacggcgccaaggcgacgatcaacgtttgggagccca 449 ||||||| |||||||| |||||||||||||||||||| || ||||| || |||| ||||| Sbjct: 33519569 cgtacgtccagggcgacaagtactacggcgccaaggcaaccatcaatgtctgggcgccca 33519628 Query: 450 agatcgagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcg 509 |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 33519629 agatcgagcagcccaacgagttcagcttgtcccagctctggatcttgggtggctccttcg 33519688 Query: 510 gcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||||||||||||||||||| |||||||| Sbjct: 33519689 gcgaggacctcaacagcatcgaggctggatggcaggt 33519725 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || |||||||||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 33518976 agagcccagatggggacatcatagattgcgtgcacatctcacaccagccagctttcgatc 33519035 Query: 90 accctttcctcaagaaccacaccatccag 118 | || |||||||||||||||||||||||| Sbjct: 33519036 atcccttcctcaagaaccacaccatccag 33519064 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 542 caggttagccctgacctctatggggacaacaacacaagactgttcacatactgg 595 ||||||||||| |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 33519917 caggttagccccgacctctacggcgacaacaacacgaggctgttcacttactgg 33519970 Score = 40.1 bits (20), Expect = 8.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 116 cagatgagaccgagctatcacccggagggcctgtacgacgagtccaag 163 |||||||| |||| ||| || || || |||||||||||||| |||||| Sbjct: 33519152 cagatgaggccgaactaccatcccgatggcctgtacgacgaatccaag 33519199
>ref|XM_477068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 196 bits (99), Expect = 6e-47 Identities = 220/259 (84%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 355 catgctcaacgagggcggccatcaacacgcgatatcgtacgttcagggcgagaagtacta 414 ||||||||| ||||| || || ||||| || ||| |||| || |||| || |||||||| Sbjct: 739 catgctcaatgagggtggtcaccaacatgccatagcgtatgtggagggggataagtacta 798 Query: 415 cggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaacgagttcag 474 || |||||||| || || || || |||||||||||||| ||||||| ||||||||||| Sbjct: 799 tggtgccaaggccaccattaatgtgtgggagcccaagattcagcagcctaacgagttcag 858 Query: 475 cctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagcatcgaggc 534 |||||||||||| |||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 859 cctgtcccagctctggatcttggggggttcatttggtgaggatctcaacagcatcgaggc 918 Query: 535 tggctggcaggttagccctgacctctatggggacaacaacacaagactgttcacatactg 594 || |||||||| ||||| ||||||||||| || || ||||| || ||||||||||||| Sbjct: 919 cgggtggcaggtcagcccagacctctatggagataataacactaggctgttcacatact- 977 Query: 595 ggactagtgatgcgtacca 613 ||||||||||||| ||||| Sbjct: 978 ggactagtgatgcttacca 996 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 1 gctcaacaagccggccgtcaagagcatagagagccctgacggggacatcatagactgcgt 60 ||||||||||||||||||||||||||| |||||||| || || |||||||| |||||||| Sbjct: 388 gctcaacaagccggccgtcaagagcatcgagagcccagatggagacatcatcgactgcgt 447 Query: 61 gcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccacaccatccagat 120 ||| |||| ||||| || || || || || || | ||||||||||| || ||||||| Sbjct: 448 gcatctctctcaccaaccagcatttgatcatcccctactcaagaaccatactctccagat 507 Query: 121 gag 123 ||| Sbjct: 508 gag 510 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 187 cggcgagaggccgatggttcagctgtggcatcggaacggcaggtgcgcgccgggcaccgt 246 |||||||| ||||||| | ||||| ||||||| || || |||||| || ||||||||| Sbjct: 574 cggcgagaagccgatgctccagctatggcatcaaaaggggaggtgcccggagggcaccgt 633 Query: 247 cccggtccggaggaccaagaaggacgacctgatgcgcgcgagctcgatgcggcgctacgg 306 |||| || |||| || |||||||| || ||| | | ||||||||| ||||||| || || Sbjct: 634 cccgatcaggagaacgaagaaggatgatctgctcagagcgagctcgttgcggcggtatgg 693 Query: 307 caggaa 312 |||||| Sbjct: 694 caggaa 699
>dbj|AK103449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129H24, full insert sequence Length = 1811 Score = 196 bits (99), Expect = 6e-47 Identities = 220/259 (84%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 355 catgctcaacgagggcggccatcaacacgcgatatcgtacgttcagggcgagaagtacta 414 ||||||||| ||||| || || ||||| || ||| |||| || |||| || |||||||| Sbjct: 738 catgctcaatgagggtggtcaccaacatgccatagcgtatgtggagggggataagtacta 797 Query: 415 cggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaacgagttcag 474 || |||||||| || || || || |||||||||||||| ||||||| ||||||||||| Sbjct: 798 tggtgccaaggccaccattaatgtgtgggagcccaagattcagcagcctaacgagttcag 857 Query: 475 cctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagcatcgaggc 534 |||||||||||| |||||||||||||| || || || ||||| ||||||||||||||||| Sbjct: 858 cctgtcccagctctggatcttggggggttcatttggtgaggatctcaacagcatcgaggc 917 Query: 535 tggctggcaggttagccctgacctctatggggacaacaacacaagactgttcacatactg 594 || |||||||| ||||| ||||||||||| || || ||||| || ||||||||||||| Sbjct: 918 cgggtggcaggtcagcccagacctctatggagataataacactaggctgttcacatact- 976 Query: 595 ggactagtgatgcgtacca 613 ||||||||||||| ||||| Sbjct: 977 ggactagtgatgcttacca 995 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 1 gctcaacaagccggccgtcaagagcatagagagccctgacggggacatcatagactgcgt 60 ||||||||||||||||||||||||||| |||||||| || || |||||||| |||||||| Sbjct: 387 gctcaacaagccggccgtcaagagcatcgagagcccagatggagacatcatcgactgcgt 446 Query: 61 gcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccacaccatccagat 120 ||| |||| ||||| || || || || || || | ||||||||||| || ||||||| Sbjct: 447 gcatctctctcaccaaccagcatttgatcatcccctactcaagaaccatactctccagat 506 Query: 121 gag 123 ||| Sbjct: 507 gag 509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 187 cggcgagaggccgatggttcagctgtggcatcggaacggcaggtgcgcgccgggcaccgt 246 |||||||| ||||||| | ||||| ||||||| || || |||||| || ||||||||| Sbjct: 573 cggcgagaagccgatgctccagctatggcatcaaaaggggaggtgcccggagggcaccgt 632 Query: 247 cccggtccggaggaccaagaaggacgacctgatgcgcgcgagctcgatgcggcgctacgg 306 |||| || |||| || |||||||| || ||| | | ||||||||| ||||||| || || Sbjct: 633 cccgatcaggagaacgaagaaggatgatctgctcagagcgagctcgttgcggcggtatgg 692 Query: 307 caggaa 312 |||||| Sbjct: 693 caggaa 698
>ref|XM_478799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1757 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 704 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 763 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 764 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 823 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 824 actagactcttcacctact-ggactagcgatgcgtatcagg 863 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 281 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 340 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 341 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 400 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 401 ggcctgtatgatgagtccaagg 422
>ref|XM_507376.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 2418 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 713 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 772 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 773 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 832 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 833 actagactcttcacctact-ggactagcgatgcgtatcagg 872 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 290 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 349 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 350 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 409 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 410 ggcctgtatgatgagtccaagg 431
>ref|XM_506420.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1699_E05.18 mRNA Length = 1772 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 846 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 905 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 906 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 965 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 966 actagactcttcacctact-ggactagcgatgcgtatcagg 1005 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 423 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 482 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 483 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 542 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 543 ggcctgtatgatgagtccaagg 564
>dbj|AK121705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075B20, full insert sequence Length = 1786 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 712 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 771 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 772 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 831 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 832 actagactcttcacctact-ggactagcgatgcgtatcagg 871 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 289 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 348 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 349 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 408 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 409 ggcctgtatgatgagtccaagg 430
>dbj|AK119637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F04, full insert sequence Length = 1765 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 711 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 770 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 771 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 830 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 831 actagactcttcacctact-ggactagcgatgcgtatcagg 870 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 288 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 347 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 348 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 407 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 408 ggcctgtatgatgagtccaagg 429
>dbj|AK102732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106A21, full insert sequence Length = 2417 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 712 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 771 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 772 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 831 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 832 actagactcttcacctact-ggactagcgatgcgtatcagg 871 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 289 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 348 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 349 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 408 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 409 ggcctgtatgatgagtccaagg 430
>dbj|AK065116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O09, full insert sequence Length = 1757 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 704 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 763 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 764 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 823 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 824 actagactcttcacctact-ggactagcgatgcgtatcagg 863 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 281 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 340 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 341 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 400 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 401 ggcctgtatgatgagtccaagg 422
>dbj|AK061739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E10, full insert sequence Length = 1772 Score = 137 bits (69), Expect = 5e-29 Identities = 139/161 (86%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 846 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 905 Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaac 574 ||||| |||||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct: 906 gaccttaacagcattgaagcaggatggcaggttagcccagatctgtatggggacaacaac 965 Query: 575 acaagactgttcacatactgggactagtgatgcgtaccagg 615 || ||||| ||||| |||| ||||||| |||||||| |||| Sbjct: 966 actagactcttcacctact-ggactagcgatgcgtatcagg 1005 Score = 115 bits (58), Expect = 2e-22 Identities = 121/142 (85%) Strand = Plus / Plus Query: 23 agcatagagagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggcc 82 ||||| ||||| ||||| || |||||||||||||| ||||||||||| ||||||| ||| Sbjct: 423 agcatcgagagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcc 482 Query: 83 ttcgaccaccctttcctcaagaaccacaccatccagatgagaccgagctatcacccggag 142 || || ||||||||||||||||||||||| ||||||||||| || || ||||| || Sbjct: 483 tttgatcaccctttcctcaagaaccacactatccagatgaggcctgattaccacccagaa 542 Query: 143 ggcctgtacgacgagtccaagg 164 |||||||| || |||||||||| Sbjct: 543 ggcctgtatgatgagtccaagg 564
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 2e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 407 aagtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaac 466 |||||||| || |||||||| || || || || |||||||||||||| ||||||| ||| Sbjct: 5715792 aagtactatggtgccaaggccaccattaatgtgtgggagcccaagattcagcagcctaac 5715851 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 |||||||||||||||||||| |||||||||||||| || || || ||||| ||||||||| Sbjct: 5715852 gagttcagcctgtcccagctctggatcttggggggttcatttggtgaggatctcaacagc 5715911 Query: 527 atcgaggctggctggcaggt 546 |||||||| || |||||||| Sbjct: 5715912 atcgaggccgggtggcaggt 5715931 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 |||| ||||| || |||||||||||||| ||||||||||| ||||||| ||||| || | Sbjct: 23125844 agagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatc 23125903 Query: 90 accctttcctcaagaaccacaccatccag 118 |||||||||||||||||||||| |||||| Sbjct: 23125904 accctttcctcaagaaccacactatccag 23125932 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 23126474 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 23126533 Query: 515 gacctcaacagcatcgaggctggctggcaggt 546 ||||| |||||||| || || || |||||||| Sbjct: 23126534 gaccttaacagcattgaagcaggatggcaggt 23126565 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 541 gcaggttagccctgacctctatggggacaacaacacaagactgttcacatactgg 595 |||||||||||| || || ||||||||||||||||| ||||| ||||| |||||| Sbjct: 23126893 gcaggttagcccagatctgtatggggacaacaacactagactcttcacctactgg 23126947 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 187 cggcgagaggccgatggttcagctgtggcatcggaacggcaggtgcgcgccgggcaccgt 246 |||||||| ||||||| | ||||| ||||||| || || |||||| || ||||||||| Sbjct: 5715468 cggcgagaagccgatgctccagctatggcatcaaaaggggaggtgcccggagggcaccgt 5715527 Query: 247 cccggtccggaggaccaagaaggacgacctgatgcgcgcgagctcgatgcggcgctacgg 306 |||| || |||| || |||||||| || ||| | | ||||||||| ||||||| || || Sbjct: 5715528 cccgatcaggagaacgaagaaggatgatctgctcagagcgagctcgttgcggcggtatgg 5715587 Query: 307 caggaa 312 |||||| Sbjct: 5715588 caggaa 5715593 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1 gctcaacaagccggccgtcaagagcat 27 ||||||||||||||||||||||||||| Sbjct: 5714550 gctcaacaagccggccgtcaagagcat 5714576 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 542 caggttagccctgacctctatggggacaacaacacaagactgttcacatactgg 595 ||||| ||||| ||||||||||| || || ||||| || ||||||||||||||| Sbjct: 5716103 caggtcagcccagacctctatggagataataacactaggctgttcacatactgg 5716156
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 135 bits (68), Expect = 2e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 407 aagtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaac 466 |||||||| || |||||||| || || || || |||||||||||||| ||||||| ||| Sbjct: 22820 aagtactatggtgccaaggccaccattaatgtgtgggagcccaagattcagcagcctaac 22879 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 |||||||||||||||||||| |||||||||||||| || || || ||||| ||||||||| Sbjct: 22880 gagttcagcctgtcccagctctggatcttggggggttcatttggtgaggatctcaacagc 22939 Query: 527 atcgaggctggctggcaggt 546 |||||||| || |||||||| Sbjct: 22940 atcgaggccgggtggcaggt 22959 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 187 cggcgagaggccgatggttcagctgtggcatcggaacggcaggtgcgcgccgggcaccgt 246 |||||||| ||||||| | ||||| ||||||| || || |||||| || ||||||||| Sbjct: 22496 cggcgagaagccgatgctccagctatggcatcaaaaggggaggtgcccggagggcaccgt 22555 Query: 247 cccggtccggaggaccaagaaggacgacctgatgcgcgcgagctcgatgcggcgctacgg 306 |||| || |||| || |||||||| || ||| | | ||||||||| ||||||| || || Sbjct: 22556 cccgatcaggagaacgaagaaggatgatctgctcagagcgagctcgttgcggcggtatgg 22615 Query: 307 caggaa 312 |||||| Sbjct: 22616 caggaa 22621 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1 gctcaacaagccggccgtcaagagcat 27 ||||||||||||||||||||||||||| Sbjct: 21578 gctcaacaagccggccgtcaagagcat 21604 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 542 caggttagccctgacctctatggggacaacaacacaagactgttcacatactgg 595 ||||| ||||| ||||||||||| || || ||||| || ||||||||||||||| Sbjct: 23131 caggtcagcccagacctctatggagataataacactaggctgttcacatactgg 23184
>gb|AY112065.1| Zea mays CL4497_1 mRNA sequence Length = 930 Score = 113 bits (57), Expect = 7e-22 Identities = 100/113 (88%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 503 tccttcggcgaggacctcaacagcatcgaggctggctggcaggttagccctgacctctat 562 ||||||||| ||||||||||||||||||| || || |||||||||||||| ||||| ||| Sbjct: 710 tccttcggccaggacctcaacagcatcgaagcaggatggcaggttagcccagacctgtat 769 Query: 563 ggggacaacaacacaagactgttcacatactgggactagtgatgcgtaccagg 615 |||||||||||||| || || ||||| |||| ||||||| ||||| ||||||| Sbjct: 770 ggggacaacaacactaggctcttcacctact-ggactagcgatgcctaccagg 821 Score = 95.6 bits (48), Expect = 2e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 355 catgctcaacgagggcggccatcaacacgcgatatcgtacgttcagggcgagaagtacta 414 ||||||||||||| |||| || || ||||| ||| ||||||| | || || |||||||| Sbjct: 562 catgctcaacgagagcggncaccagcacgccatagcgtacgtggaaggagacaagtacta 621 Query: 415 cggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaacgagttcag 474 |||||||||||| || ||||| || ||| |||| |||||||||||| |||| |||||||| Sbjct: 622 cggcgccaaggctaccatcaatgtgtggcagccgaagatcgagcaggccaatgagttcag 681 Query: 475 cct 477 ||| Sbjct: 682 cct 684 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 39 acggggacatcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcc 98 |||| |||||||||||||||||||| ||||| ||||||| ||||| || || ||||||| Sbjct: 252 acggagacatcatagactgcgtgcatatctccaaccagcccgccttggatcatcctttcc 311 Query: 99 tcaagaaccacaccatccagatg 121 |||||||||||||| |||||||| Sbjct: 312 tcaagaaccacaccgtccagatg 334
>gb|AY108738.1| Zea mays PCO103663 mRNA sequence Length = 923 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 2 ctcaacaagccggccgtcaagagcatagagagccctgacggggacatcatagactgcgtg 61 |||||||||||||||||||||||||| ||||| || || || |||||||| ||||||||| Sbjct: 401 ctcaacaagccggccgtcaagagcatcgagagtccagatggagacatcatcgactgcgtg 460 Query: 62 cacatctcgcaccagccggccttcgaccaccctttcctcaagaaccacac 111 || ||||| |||||||| || || || || ||| |||||||||||||||| Sbjct: 461 catatctcccaccagccagcgtttgatcatcctctcctcaagaaccacac 510 Score = 103 bits (52), Expect = 7e-19 Identities = 144/174 (82%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 355 catgctcaacgagggcggccatcaacacgcgatatcgtacgttcagggcgagaagtacta 414 |||||||| |||||| ||| | |||||||| || ||||||| |||||||| |||||||| Sbjct: 751 catgctcagcgagggtggc-accaacacgccattgcgtacgtccagggcgacaagtacta 809 Query: 415 cggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaacgagttcag 474 || || ||||| || || || || |||||||||||||| ||||| | ||||| || || Sbjct: 810 tggtgcaaaggccaccattaatgtgtgggagcccaagattcagcaggctaacgaatttag 869 Query: 475 cctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagcat 528 |||||||||||| |||||||||| ||| || || || ||||| ||||||||||| Sbjct: 870 cctgtcccagctctggatcttggnggggtcatttggngaggatctcaacagcat 923 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 188 ggcgagaggccgatggttcagctgtggcatcggaacggcaggtgcgcgccgggcaccgtc 247 ||||||||||||||| | ||| |||||||||| || ||||||||| | |||||| || Sbjct: 587 ggcgagaggccgatgctccagatgtggcatcgaaatggcaggtgccccgagggcacggtt 646 Query: 248 ccggtccggaggaccaagaaggacgacctgatgcgcgcgagctcgatgcggcgctacggc 307 || || |||| |||||||||||||||||| | || || ||||| || |||| || ||| Sbjct: 647 ccaatcaggagaaccaagaaggacgacctgcttcgagctagctccgtgaggcggtatggc 706 Query: 308 aggaagc 314 ||||||| Sbjct: 707 aggaagc 713
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 |||| ||||| || |||||||||||||| ||||||||||| ||||||| ||||| || | Sbjct: 70028 agagtcctgatggagacatcatagactgtgtgcacatctccaaccagcctgcctttgatc 70087 Query: 90 accctttcctcaagaaccacaccatccag 118 |||||||||||||||||||||| |||||| Sbjct: 70088 accctttcctcaagaaccacactatccag 70116 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 455 gagcagcccaacgagttcagcctgtcccagctgtggatcttggggggctccttcggcgag 514 |||||| |||| |||||||||||||||||||| ||||||||||| || ||||| || || Sbjct: 70658 gagcaggccaatgagttcagcctgtcccagctctggatcttgggtggttcctttgggcag 70717 Query: 515 gacctcaacagcatcgaggctggctggcaggt 546 ||||| |||||||| || || || |||||||| Sbjct: 70718 gaccttaacagcattgaagcaggatggcaggt 70749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 541 gcaggttagccctgacctctatggggacaacaacacaagactgttcacatactgg 595 |||||||||||| || || ||||||||||||||||| ||||| ||||| |||||| Sbjct: 71077 gcaggttagcccagatctgtatggggacaacaacactagactcttcacctactgg 71131
>dbj|AK107465.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-A10, full insert sequence Length = 1554 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 515 gacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaaca 572 |||||||||||||||||||| || |||||||| |||||||| || ||||||||||||| Sbjct: 817 gacctcaacagcatcgaggccggatggcaggtcagccctgagctgtatggggacaaca 874
>ref|XM_550273.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1943 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggttagccctgacctc 559 |||||||||||| | |||||||||| |||||| || || |||||||| |||||||| || Sbjct: 798 ggctccttcggcaatgacctcaacaccatcgaagccggatggcaggtgagccctgaactg 857 Query: 560 tatggggacaacaacacaagactgttcacatactgg 595 ||||| || |||||| |||| | |||||||||||| Sbjct: 858 tatggagataacaacccaaggttcttcacatactgg 893
>dbj|AK106837.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-G08, full insert sequence Length = 1941 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggttagccctgacctc 559 |||||||||||| | |||||||||| |||||| || || |||||||| |||||||| || Sbjct: 797 ggctccttcggcaatgacctcaacaccatcgaagccggatggcaggtgagccctgaactg 856 Query: 560 tatggggacaacaacacaagactgttcacatactgg 595 ||||| || |||||| |||| | |||||||||||| Sbjct: 857 tatggagataacaacccaaggttcttcacatactgg 892
>ref|NM_112197.2| Arabidopsis thaliana unknown protein AT3G13510 mRNA, complete cds Length = 1877 Score = 65.9 bits (33), Expect = 1e-07 Identities = 160/201 (79%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 407 aagtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaac 466 ||||||||||| || |||||||| | || || |||||||| ||||| || | | ||| Sbjct: 811 aagtactacggagctaaggcgactttgaatgtgtgggagccaaagatacagaacacaaac 870 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 || |||||| |||| ||| | ||| | |||||||| ||||| || | || || ||||| Sbjct: 871 gaattcagcttgtcgcagatatggcttttggggggttcctttggacaagatcttaacagt 930 Query: 527 atcgaggctggctggcaggttagccctgacctctatggggacaacaacacaagactgttc 586 || || |||||||||||||| || || || || ||||| ||||| ||||||||||| ||| Sbjct: 931 attgaagctggctggcaggtgagtccggatctatatggagacaataacacaagactcttc 990 Query: 587 acatactgggactagtgatgc 607 || |||| ||||||||||||| Sbjct: 991 acttact-ggactagtgatgc 1010
>gb|AY075687.1| Arabidopsis thaliana AT3g13510/MRP15_15 mRNA, complete cds Length = 1715 Score = 65.9 bits (33), Expect = 1e-07 Identities = 160/201 (79%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 407 aagtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaac 466 ||||||||||| || |||||||| | || || |||||||| ||||| || | | ||| Sbjct: 810 aagtactacggagctaaggcgactttgaatgtgtgggagccaaagatacagaacacaaac 869 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 || |||||| |||| ||| | ||| | |||||||| ||||| || | || || ||||| Sbjct: 870 gaattcagcttgtcgcagatatggcttttggggggttcctttggacaagatcttaacagt 929 Query: 527 atcgaggctggctggcaggttagccctgacctctatggggacaacaacacaagactgttc 586 || || |||||||||||||| || || || || ||||| ||||| ||||||||||| ||| Sbjct: 930 attgaagctggctggcaggtgagtccggatctatatggagacaataacacaagactcttc 989 Query: 587 acatactgggactagtgatgc 607 || |||| ||||||||||||| Sbjct: 990 acttact-ggactagtgatgc 1009
>gb|AY087706.1| Arabidopsis thaliana clone 37810 mRNA, complete sequence Length = 1788 Score = 65.9 bits (33), Expect = 1e-07 Identities = 160/201 (79%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 407 aagtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaac 466 ||||||||||| || |||||||| | || || |||||||| ||||| || | | ||| Sbjct: 805 aagtactacggagctaaggcgactttgaatgtgtgggagccaaagatacagaacacaaac 864 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 || |||||| |||| ||| | ||| | |||||||| ||||| || | || || ||||| Sbjct: 865 gaattcagcttgtcgcagatatggcttttggggggttcctttggacaagatcttaacagt 924 Query: 527 atcgaggctggctggcaggttagccctgacctctatggggacaacaacacaagactgttc 586 || || |||||||||||||| || || || || ||||| ||||| ||||||||||| ||| Sbjct: 925 attgaagctggctggcaggtgagtccggatctatatggagacaataacacaagactcttc 984 Query: 587 acatactgggactagtgatgc 607 || |||| ||||||||||||| Sbjct: 985 acttact-ggactagtgatgc 1004
>gb|BT001136.1| Arabidopsis thaliana At3g13510/MRP15_15 mRNA, complete cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 160/201 (79%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 407 aagtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagcagcccaac 466 ||||||||||| || |||||||| | || || |||||||| ||||| || | | ||| Sbjct: 544 aagtactacggagctaaggcgactttgaatgtgtgggagccaaagatacagaacacaaac 603 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 || |||||| |||| ||| | ||| | |||||||| ||||| || | || || ||||| Sbjct: 604 gaattcagcttgtcgcagatatggcttttggggggttcctttggacaagatcttaacagt 663 Query: 527 atcgaggctggctggcaggttagccctgacctctatggggacaacaacacaagactgttc 586 || || |||||||||||||| || || || || ||||| ||||| ||||||||||| ||| Sbjct: 664 attgaagctggctggcaggtgagtccggatctatatggagacaataacacaagactcttc 723 Query: 587 acatactgggactagtgatgc 607 || |||| ||||||||||||| Sbjct: 724 acttact-ggactagtgatgc 743
>ref|XM_476052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 63.9 bits (32), Expect = 6e-07 Identities = 96/116 (82%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggttagccctgacctc 559 |||||||||||| | |||||||||| ||||||||| || |||||||| |||||| | || Sbjct: 730 ggctccttcggcaatgacctcaacaccatcgaggccggatggcaggtgagccctcagctg 789 Query: 560 tatggggacaacaacacaagactgttcacatactgggactagtgatgcgtaccagg 615 || || ||||||||| |||| | ||||| || ||| || | |||||||||||||| Sbjct: 790 tacggtgacaacaacccaaggttcttcacgtattgg-acaaatgatgcgtaccagg 844
>ref|NM_125036.3| Arabidopsis thaliana unknown protein AT5G56530 mRNA, complete cds Length = 1702 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 518 ctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaacaca 577 ||||||||||| || ||||| ||||||||||| || || | ||||| || ||||||||| Sbjct: 767 ctcaacagcattgaagctggttggcaggttagtccagatttatatggcgataacaacaca 826 Query: 578 agactgttcacatactgg 595 || || |||||||||||| Sbjct: 827 aggcttttcacatactgg 844
>ref|NM_193355.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 60.0 bits (30), Expect = 9e-06 Identities = 119/146 (81%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 408 agtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagca-gcccaac 466 |||||||||| || ||||||| |||||||| |||| ||||||| | ||||| ||| | Sbjct: 719 agtactacggggcgaaggcgagcatcaacgtgtgggcgcccaaggt-gagcacgccggag 777 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 ||||||||||| || ||| | ||| || | | ||||| |||||| | |||||||||| | Sbjct: 778 gagttcagcctctcgcagatctgggtcatcgccggctctttcggcaacgacctcaacacc 837 Query: 527 atcgaggctggctggcaggttagccc 552 |||||||| ||||||||||| ||||| Sbjct: 838 atcgaggccggctggcaggtgagccc 863
>gb|BT015584.1| Arabidopsis thaliana At5g56530 mRNA sequence Length = 1173 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 518 ctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaacaca 577 ||||||||||| || ||||| ||||||||||| || || | ||||| || ||||||||| Sbjct: 568 ctcaacagcattgaagctggttggcaggttagtccagatttatatggcgataacaacaca 627 Query: 578 agactgttcacatactgg 595 || || |||||||||||| Sbjct: 628 aggcttttcacatactgg 645
>gb|AY142658.1| Arabidopsis thaliana unknown protein (At5g56530) mRNA, complete cds Length = 1294 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 518 ctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaacaca 577 ||||||||||| || ||||| ||||||||||| || || | ||||| || ||||||||| Sbjct: 658 ctcaacagcattgaagctggttggcaggttagtccagatttatatggcgataacaacaca 717 Query: 578 agactgttcacatactgg 595 || || |||||||||||| Sbjct: 718 aggcttttcacatactgg 735
>gb|AY064041.1| Arabidopsis thaliana unknown protein (At5g56530) mRNA, complete cds Length = 1717 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 518 ctcaacagcatcgaggctggctggcaggttagccctgacctctatggggacaacaacaca 577 ||||||||||| || ||||| ||||||||||| || || | ||||| || ||||||||| Sbjct: 767 ctcaacagcattgaagctggttggcaggttagtccagatttatatggcgataacaacaca 826 Query: 578 agactgttcacatactgg 595 || || |||||||||||| Sbjct: 827 aggcttttcacatactgg 844
>ref|NM_189476.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 275 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 334 Query: 90 accctttcctcaagaaccacaccatccag 118 | ||| |||||||||||||||| |||||| Sbjct: 335 atcctctcctcaagaaccacacaatccag 363
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 42952822 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 42952881 Query: 90 accctttcctcaagaaccacaccatccag 118 | ||| |||||||||||||||| |||||| Sbjct: 42952882 atcctctcctcaagaaccacacaatccag 42952910 Score = 56.0 bits (28), Expect = 1e-04 Identities = 114/140 (81%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 408 agtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagca-gcccaac 466 |||||||||| || ||||||| |||||||| |||| ||||||| | ||||| ||| | Sbjct: 20336527 agtactacggggcgaaggcgagcatcaacgtgtgggcgcccaaggt-gagcacgccggag 20336469 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 ||||||||||| || ||| | ||| || | | ||||| |||||| | |||||||||| | Sbjct: 20336468 gagttcagcctctcgcagatctgggtcatcgccggctctttcggcaacgacctcaacacc 20336409 Query: 527 atcgaggctggctggcaggt 546 |||||||| ||||||||||| Sbjct: 20336408 atcgaggccggctggcaggt 20336389 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||| | |||||||||| |||||| || || |||||||| Sbjct: 3636478 ggctccttcggcaatgacctcaacaccatcgaagccggatggcaggt 3636432 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 50 atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 109 |||||||| ||||||||||| ||||| || ||||| || ||| ||||||||||||| Sbjct: 20647999 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 20648058 Query: 110 accatccag 118 || |||||| Sbjct: 20648059 acaatccag 20648067
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 53701 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 53760 Query: 90 accctttcctcaagaaccacaccatccag 118 | ||| |||||||||||||||| |||||| Sbjct: 53761 atcctctcctcaagaaccacacaatccag 53789
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || || || ||||||||||| ||||| ||||| | ||||| || ||||| | Sbjct: 146556 agagcccagatggagatatcatagactgtgtgcatatctccaaacagcctgcgttcgatc 146615 Query: 90 accctttcctcaagaaccacaccatccag 118 | ||| |||||||||||||||| |||||| Sbjct: 146616 atcctctcctcaagaaccacacaatccag 146644
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 56.0 bits (28), Expect = 1e-04 Identities = 114/140 (81%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 408 agtactacggcgccaaggcgacgatcaacgtttgggagcccaagatcgagca-gcccaac 466 |||||||||| || ||||||| |||||||| |||| ||||||| | ||||| ||| | Sbjct: 102560 agtactacggggcgaaggcgagcatcaacgtgtgggcgcccaaggt-gagcacgccggag 102502 Query: 467 gagttcagcctgtcccagctgtggatcttggggggctccttcggcgaggacctcaacagc 526 ||||||||||| || ||| | ||| || | | ||||| |||||| | |||||||||| | Sbjct: 102501 gagttcagcctctcgcagatctgggtcatcgccggctctttcggcaacgacctcaacacc 102442 Query: 527 atcgaggctggctggcaggt 546 |||||||| ||||||||||| Sbjct: 102441 atcgaggccggctggcaggt 102422
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||| | |||||||||| ||||||||| || |||||||| Sbjct: 9726 ggctccttcggcaatgacctcaacaccatcgaggccggatggcaggt 9680
>gb|AY039662.2| Gossypium hirsutum putative carboxyl-terminal proteinase mRNA, complete cds Length = 1917 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 509 ggcgaggacctcaacagcatcgaggctggctggcaggttagccctgacctctatggggac 568 ||||| || ||||||| ||| || |||||||||||||| ||||| || || ||||||||| Sbjct: 1042 ggcgatgatctcaacaccattgaagctggctggcaggtgagcccagaactatatggggac 1101 Query: 569 aac 571 ||| Sbjct: 1102 aac 1104
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||| | |||||||||| ||||||||| || |||||||| Sbjct: 97941 ggctccttcggcaatgacctcaacaccatcgaggccggatggcaggt 97895
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||| | |||||||||| ||||||||| || |||||||| Sbjct: 4123247 ggctccttcggcaatgacctcaacaccatcgaggccggatggcaggt 4123201
>ref|XM_483841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1495 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 515 gacctcaacagcatcgaggctggctggcaggt 546 |||||||||||||||||||| || |||||||| Sbjct: 817 gacctcaacagcatcgaggccggatggcaggt 848
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 515 gacctcaacagcatcgaggctggctggcaggt 546 |||||||||||||||||||| || |||||||| Sbjct: 28352642 gacctcaacagcatcgaggccggatggcaggt 28352611 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggcctcctccggcgacggcgag 193 |||||| ||||||||||||||||| Sbjct: 19132762 gtggccacctccggcgacggcgag 19132785
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 515 gacctcaacagcatcgaggctggctggcaggt 546 |||||||||||||||||||| || |||||||| Sbjct: 81448 gacctcaacagcatcgaggccggatggcaggt 81417
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggt 546 |||||||||||| | |||||||||| |||||| || || |||||||| Sbjct: 44958 ggctccttcggcaatgacctcaacaccatcgaagccggatggcaggt 44912
>ref|NM_129986.2| Arabidopsis thaliana unknown protein AT2G44220 mRNA, complete cds Length = 1344 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 104 aaccacaccatccagatgagaccgag 129 ||||| |||||||||||||||||||| Sbjct: 215 aaccataccatccagatgagaccgag 240
>ref|NM_193406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 44.1 bits (22), Expect = 0.54 Identities = 58/70 (82%) Strand = Plus / Plus Query: 50 atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 109 |||||||| ||||||||||| ||||| || ||||| || ||| ||||||||||||| Sbjct: 196 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 255 Query: 110 accatccaga 119 || ||||||| Sbjct: 256 acaatccaga 265
>gb|AY954838.1| Arabidopsis thaliana hypothetical protein (At2g44220) mRNA, complete cds Length = 1182 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 104 aaccacaccatccagatgagaccgag 129 ||||| |||||||||||||||||||| Sbjct: 196 aaccataccatccagatgagaccgag 221
>dbj|AK104980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D09, full insert sequence Length = 1770 Score = 44.1 bits (22), Expect = 0.54 Identities = 58/70 (82%) Strand = Plus / Plus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggttagccctgacctc 559 |||||||||||| | || || |||| ||| || ||||| |||||||| |||||||| || Sbjct: 876 ggctccttcggcaatgatctgaacaccattgaagctggatggcaggtcagccctgagctg 935 Query: 560 tatggggaca 569 ||||| |||| Sbjct: 936 tatggagaca 945
>dbj|AK073288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028L24, full insert sequence Length = 1849 Score = 44.1 bits (22), Expect = 0.54 Identities = 58/70 (82%) Strand = Plus / Plus Query: 500 ggctccttcggcgaggacctcaacagcatcgaggctggctggcaggttagccctgacctc 559 |||||||||||| | || || |||| ||| || ||||| |||||||| |||||||| || Sbjct: 983 ggctccttcggcaatgatctgaacaccattgaagctggatggcaggtcagccctgagctg 1042 Query: 560 tatggggaca 569 ||||| |||| Sbjct: 1043 tatggagaca 1052
>ref|NM_129989.3| Arabidopsis thaliana unknown protein AT2G44250 mRNA, complete cds Length = 1352 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 92 cctttcctcaagaaccacaccatccagatgagaccga 128 ||||| ||||| ||||||||||| |||||||| |||| Sbjct: 223 cctttactcaaaaaccacaccattcagatgaggccga 259
>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence Length = 152220 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tttcctcaagaaccacaccat 114 ||||||||||||||||||||| Sbjct: 144501 tttcctcaagaaccacaccat 144521
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gctcaacgagggcggccatca 378 ||||||||||||||||||||| Sbjct: 2330848 gctcaacgagggcggccatca 2330828
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 ggcctcctccggcgacggcga 192 ||||||||||||||||||||| Sbjct: 231249 ggcctcctccggcgacggcga 231229
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Minus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || || || ||||||||||| ||||||||||| ||||| || ||||| | Sbjct: 9577480 agagcccagatggagatatcatagactgtgtgcacatctccagacagcctgcattcgatc 9577421 Query: 90 accctttcctcaagaaccacaccatccag 118 | ||| |||||||| |||| || |||||| Sbjct: 9577420 atcctctcctcaaggaccatacaatccag 9577392
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tttcctcaagaaccacaccat 114 ||||||||||||||||||||| Sbjct: 110343 tttcctcaagaaccacaccat 110323
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 50 atagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaaccac 109 |||||||| ||||||||||| ||||| || ||||| || ||| ||||||||||||| Sbjct: 109975 atagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaagaaccat 110034 Query: 110 accatccag 118 || |||||| Sbjct: 110035 acaatccag 110043
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ggccgtcaagagcatagagag 33 ||||||||||||||||||||| Sbjct: 1315323 ggccgtcaagagcatagagag 1315303
>dbj|AP003540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0450D12 Length = 176431 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Minus Query: 30 agagccctgacggggacatcatagactgcgtgcacatctcgcaccagccggccttcgacc 89 ||||||| || || || ||||||||||| ||||||||||| ||||| || ||||| | Sbjct: 36097 agagcccagatggagatatcatagactgtgtgcacatctccagacagcctgcattcgatc 36038 Query: 90 accctttcctcaagaaccacaccatccag 118 | ||| |||||||| |||| || |||||| Sbjct: 36037 atcctctcctcaaggaccatacaatccag 36009
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 gtgcgcgccgggcaccgtcccggtc 253 |||||||||||||||||||| |||| Sbjct: 1391618 gtgcgcgccgggcaccgtccgggtc 1391642
>dbj|AP006405.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08E06, TM0296a, complete sequence Length = 66228 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 541 gcaggttagccctgacctctatggggaca 569 |||||| |||||||| ||||||||||||| Sbjct: 8451 gcaggtcagccctgagctctatggggaca 8423
>dbj|AP004920.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076c, complete sequence Length = 67145 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 541 gcaggttagccctgacctctatggggaca 569 |||||| |||||||| ||||||||||||| Sbjct: 30892 gcaggtcagccctgagctctatggggaca 30864
>ref|NM_127493.2| Arabidopsis thaliana unknown protein AT2G19360 mRNA, complete cds Length = 1281 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 tcaagaaccacaccatccagatgagacc 126 |||| ||||||||||| ||||||||||| Sbjct: 221 tcaaaaaccacaccattcagatgagacc 248
>ref|XM_482267.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2055 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggcctcctccggcgacggcgag 193 |||||| ||||||||||||||||| Sbjct: 271 gtggccacctccggcgacggcgag 294
>ref|NM_193404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 40.1 bits (20), Expect = 8.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 47 atcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaac 106 |||||||| || ||||||||||| | || || || |||||||| ||| | |||||| || Sbjct: 169 atcatagattgtgtgcacatctccaatcaacctgcattcgaccatcctcttctcaaggac 228 Query: 107 cacaccatccagatgagacc 126 || || ||||||||| |||| Sbjct: 229 catacaatccagatgcgacc 248
>gb|AF493159.1| Medicago truncatula lecithine cholesterol acyltransferase-like protein mRNA, complete cds Length = 2609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ctcctccggcgacggcgaga 194 |||||||||||||||||||| Sbjct: 145 ctcctccggcgacggcgaga 126
>ref|XM_417845.1| PREDICTED: Gallus gallus similar to UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (GPT) (G1PT) (N-acetylglucosamine-1-phosphate transferase) (GlcNAc-1-P transferase) (LOC419699), mRNA Length = 1357 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cttcggcgaggacctcaaca 524 |||||||||||||||||||| Sbjct: 178 cttcggcgaggacctcaaca 197
>gb|AE009227.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 253 of 256 of the complete sequence Length = 13415 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 acccgatgtcggtcgatctc 352 |||||||||||||||||||| Sbjct: 13183 acccgatgtcggtcgatctc 13164
>gb|AE009175.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 201 of 256 of the complete sequence Length = 12407 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 cctcctccggcgacggcgagaggccgat 201 |||||||||||||||||| || |||||| Sbjct: 4657 cctcctccggcgacggcgtgacgccgat 4684
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ggaacggcaggtgcgcgccg 238 |||||||||||||||||||| Sbjct: 1899874 ggaacggcaggtgcgcgccg 1899893
>gb|AY102564.1| Arabidopsis thaliana hypothetical protein (At2g44220/F4I1.3) mRNA, complete cds Length = 1358 Score = 40.1 bits (20), Expect = 8.4 Identities = 24/26 (92%) Strand = Plus / Plus Query: 104 aaccacaccatccagatgagaccgag 129 ||||| |||||||||||||||| ||| Sbjct: 215 aaccataccatccagatgagacmgag 240
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE Length = 128654 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 542 caggttagccctgacctctatggggaca 569 ||||| |||||||| ||||||||||||| Sbjct: 26112 caggtcagccctgagctctatggggaca 26085
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 tgcgcgcgagctcgatgcggcgct 302 |||||||||||||||||| ||||| Sbjct: 1314974 tgcgcgcgagctcgatgcagcgct 1314997
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22 Length = 100285 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 515 gacctcaacagcatcgaggctggctggcaggt 546 ||||||||||| || ||||| ||||||||||| Sbjct: 17507 gacctcaacagtatagaggccggctggcaggt 17476
>dbj|AK057625.1| Homo sapiens cDNA FLJ33063 fis, clone TRACH2000047 Length = 2900 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 agttcagcctgtcccagctg 487 |||||||||||||||||||| Sbjct: 40 agttcagcctgtcccagctg 59
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 acccgatgtcggtcgatctc 352 |||||||||||||||||||| Sbjct: 2807935 acccgatgtcggtcgatctc 2807916 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 cctcctccggcgacggcgagaggccgat 201 |||||||||||||||||| || |||||| Sbjct: 2228631 cctcctccggcgacggcgtgacgccgat 2228658
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 agctcgatgcggcgctacggcagg 310 |||||||||||||||| ||||||| Sbjct: 1080511 agctcgatgcggcgctgcggcagg 1080488
>emb|BX936060.2| Gallus gallus finished cDNA, clone ChEST488e4 Length = 831 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cttcggcgaggacctcaaca 524 |||||||||||||||||||| Sbjct: 240 cttcggcgaggacctcaaca 259
>emb|BX929393.2| Gallus gallus finished cDNA, clone ChEST184d24 Length = 1357 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cttcggcgaggacctcaaca 524 |||||||||||||||||||| Sbjct: 178 cttcggcgaggacctcaaca 197
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cggcaggtgcgcgccgggca 242 |||||||||||||||||||| Sbjct: 950980 cggcaggtgcgcgccgggca 950999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cggcaggtgcgcgccgggca 242 |||||||||||||||||||| Sbjct: 268562 cggcaggtgcgcgccgggca 268543
>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete sequence Length = 176708 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 agttcagcctgtcccagctg 487 |||||||||||||||||||| Sbjct: 17297 agttcagcctgtcccagctg 17316
>gb|AC020659.5|AC020659 Homo sapiens chromosome 15 clone RP11-23P13 map 15q14, complete sequence Length = 139376 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 agttcagcctgtcccagctg 487 |||||||||||||||||||| Sbjct: 133714 agttcagcctgtcccagctg 133733
>ref|XM_223937.3| PREDICTED: Rattus norvegicus discs, large homolog 7 (Drosophila) (predicted) (Dlg7_predicted), mRNA Length = 2664 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaggaagcacaagccca 323 |||||||||||||||||||| Sbjct: 1639 cggcaggaagcacaagccca 1658
>ref|XM_573472.1| PREDICTED: Rattus norvegicus similar to discs large homolog 7 (LOC498248), mRNA Length = 798 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaggaagcacaagccca 323 |||||||||||||||||||| Sbjct: 577 cggcaggaagcacaagccca 596
>gb|AF458783.1| Microlobius foetidus internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 574 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cgcgccgggcaccgtcccggtccg 255 ||||||||||||||| |||||||| Sbjct: 175 cgcgccgggcaccgtgccggtccg 152
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 560 tatggggacaacaacacaagactgttcacatactgg 595 ||||| ||||| ||||||||||| ||||| |||||| Sbjct: 58928 tatggagacaataacacaagactcttcacttactgg 58963
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 560 tatggggacaacaacacaagactgttcacatactgg 595 ||||| || ||||||||||| || |||||||||||| Sbjct: 16023 tatggcgataacaacacaaggcttttcacatactgg 16058
>dbj|AK121508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C05, full insert sequence Length = 2303 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggcctcctccggcgacggcgag 193 |||||| ||||||||||||||||| Sbjct: 330 gtggccacctccggcgacggcgag 353
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggcctcctccggcgacggcgag 193 |||||| ||||||||||||||||| Sbjct: 55127 gtggccacctccggcgacggcgag 55150
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ggaacggcaggtgcgcgccg 238 |||||||||||||||||||| Sbjct: 2398469 ggaacggcaggtgcgcgccg 2398488
>dbj|AK064194.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D02, full insert sequence Length = 1552 Score = 40.1 bits (20), Expect = 8.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 47 atcatagactgcgtgcacatctcgcaccagccggccttcgaccaccctttcctcaagaac 106 |||||||| || ||||||||||| | || || || |||||||| ||| | |||||| || Sbjct: 217 atcatagattgtgtgcacatctccaatcaacctgcattcgaccatcctcttctcaaggac 276 Query: 107 cacaccatccagatgagacc 126 || || ||||||||| |||| Sbjct: 277 catacaatccagatgcgacc 296
>gb|AY111527.1| Zea mays CL34891_1 mRNA sequence Length = 586 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 tcctcaagaaccacaccatccagatgag 123 |||||||||||||||| || |||||||| Sbjct: 336 tcctcaagaaccacacaatacagatgag 363
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cgccatgctcaacgagggcg 371 |||||||||||||||||||| Sbjct: 5834049 cgccatgctcaacgagggcg 5834068
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 gatgcgcgcgagctcgatgcggcg 300 ||||||||| |||||||||||||| Sbjct: 461085 gatgcgcgccagctcgatgcggcg 461062
>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete sequence Length = 184866 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 acaagactgttcacatactg 594 |||||||||||||||||||| Sbjct: 102185 acaagactgttcacatactg 102166 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,461,384 Number of Sequences: 3902068 Number of extensions: 3461384 Number of successful extensions: 129040 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 127802 Number of HSP's gapped (non-prelim): 1229 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
