ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3a23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK109426.2| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
2dbj|AK073545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
3gb|AY105662.1| Zea mays PCO112379 mRNA sequence 406 e-110
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
5dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
6dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
7gb|AF494368.1| Arabidopsis lyrata subsp. petraea short-chain alc... 64 5e-07
8gb|AY174527.1| Arabidopsis lyrata subsp. lyrata isolate Mi9-1.2 ... 64 5e-07
9gb|AY174526.1| Arabidopsis lyrata subsp. lyrata isolate MI9-1.1 ... 64 5e-07
10gb|AY174525.1| Arabidopsis lyrata subsp. lyrata isolate Mi8-1.2 ... 64 5e-07
11gb|AY174524.1| Arabidopsis lyrata subsp. lyrata isolate Mi8-1.1 ... 64 5e-07
12gb|AY174523.1| Arabidopsis lyrata subsp. lyrata isolate Nc4-1.2 ... 64 5e-07
13gb|AY174522.1| Arabidopsis lyrata subsp. lyrata isolate NC4-1.1 ... 64 5e-07
14gb|AY174521.1| Arabidopsis lyrata subsp. lyrata isolate Nc3-2.2 ... 64 5e-07
15gb|AY174520.1| Arabidopsis lyrata subsp. lyrata isolate Nc3-2.1 ... 64 5e-07
16gb|AY174519.1| Arabidopsis lyrata subsp. lyrata isolate Nc2-2.2 ... 64 5e-07
17gb|AY174518.1| Arabidopsis lyrata subsp. lyrata isolate Nc2-2.1 ... 64 5e-07
18gb|AY174517.1| Arabidopsis lyrata subsp. lyrata isolate Nc1-7.2 ... 64 5e-07
19gb|AY174516.1| Arabidopsis lyrata subsp. lyrata isolate NC1-7.1 ... 64 5e-07
20gb|AY174507.1| Arabidopsis lyrata subsp. petraea isolate Sc17-1.... 64 5e-07
21gb|AY174506.1| Arabidopsis lyrata subsp. petraea isolate Sc14-1.... 64 5e-07
22gb|AY174504.1| Arabidopsis lyrata subsp. petraea isolate Sc14-1.... 64 5e-07
23gb|AY174502.1| Arabidopsis lyrata subsp. petraea isolate Sc15-1.... 64 5e-07
24ref|NM_116791.1| Arabidopsis thaliana oxidoreductase AT4G05530 m... 58 3e-05
25gb|AY113900.1| Arabidopsis thaliana unknown protein (At4g05530) ... 58 3e-05
26gb|AY035106.1| Arabidopsis thaliana unknown protein (At4g05530) ... 58 3e-05
27emb|BX826379.1|CNS0A2B1 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
28gb|AY087807.1| Arabidopsis thaliana clone 38543 mRNA, complete s... 58 3e-05
29dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone... 58 3e-05
30emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, ... 56 1e-04
31gb|AY174529.1| Arabidopsis thaliana isolate KNO10 short chain al... 56 1e-04
32gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24 56 1e-04
33gb|AY174515.1| Arabidopsis lyrata subsp. petraea isolate Ic38-1.... 50 0.008
34gb|AY174514.1| Arabidopsis lyrata subsp. petraea isolate Ic33-3.... 50 0.008
35gb|AY174513.1| Arabidopsis lyrata short-chain alcohol dehydrogen... 50 0.008
36gb|AY174512.1| Arabidopsis lyrata subsp. petraea isolate Ic38-1.... 50 0.008
37gb|AY174511.1| Arabidopsis lyrata subsp. petraea isolate Ic42-1.... 50 0.008
38gb|AY174510.1| Arabidopsis lyrata subsp. petraea isolate Ic36-1.... 50 0.008
39gb|AY174509.1| Arabidopsis lyrata subsp. petraea isolate Ic32-7.... 50 0.008
40gb|AY174508.1| Arabidopsis lyrata subsp. petraea isolate Ic32-7.... 50 0.008
41gb|AY174503.1| Arabidopsis lyrata subsp. petraea isolate Sc15-1.... 50 0.008
42emb|AL160408.24| Human DNA sequence from clone RP4-781K5 on chro... 48 0.031
43gb|AY174531.1| Arabidopsis thaliana isolate GOT16 short chain al... 48 0.031
44gb|AY174530.1| Arabidopsis thaliana isolate CIBC6 short chain al... 48 0.031
45gb|AY174528.1| Arabidopsis thaliana isolate PUZ16 short chain al... 48 0.031
46gb|AY174505.1| Arabidopsis lyrata subsp. petraea isolate Sc17-1.... 48 0.031
47dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.031
48dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.031
49dbj|AB025332.1| Lampetra reissneri mRNA for RNA polymerase II la... 46 0.12
50gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Canc... 44 0.48
51gb|AF253049.1|AF253049 Echis coloratus clone EC3 phospholipase A... 44 0.48
52gb|DQ294585.1| Hyaloraphidium curvatum isolate AFTOL-ID-26 RNA p... 44 0.48
53emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 42 1.9
54gb|AC013265.7| Homo sapiens BAC clone RP11-197H3 from 2, complet... 42 1.9
55gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.9
56ref|XM_479614.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.6
57gb|AY650399.1| Homo sapiens cell division cycle 34 (CDC34) gene,... 40 7.6
58ref|NM_131802.1| Danio rerio ceruloplasmin (cp), mRNA 40 7.6
59gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete se... 40 7.6
60emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chr... 40 7.6
61gb|BC048037.1| Danio rerio ceruloplasmin, mRNA (cDNA clone MGC:5... 40 7.6
62gb|BC064000.1| Danio rerio ceruloplasmin, mRNA (cDNA clone MGC:7... 40 7.6
63gb|AC011556.9| Homo sapiens chromosome 19 clone LLNLR-281B11, co... 40 7.6
64gb|AE005855.1| Caulobacter crescentus CB15 section 181 of 359 of... 40 7.6
65gb|AC026806.5| Homo sapiens chromosome 19 clone LLNLR-271E7, com... 40 7.6
66gb|AY129330.1| Mycobacteriopahge Che8, complete sequence 40 7.6
67gb|AF336125.1|AF336125 Danio rerio ceruloplasmin mRNA, partial cds 40 7.6
68dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
69gb|AE004956.1| Pseudomonas aeruginosa PAO1, section 517 of 529 o... 40 7.6
70gb|AC011531.7|AC011531 Homo sapiens chromosome 19 clone LLNLR-23... 40 7.6
71dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 7.6
72dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
73dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
74gb|U89712.1|RGU89712 Rhodococcus globerulus hpp operon, 3-(3-hyd... 40 7.6
75emb|AL844578.4| Mouse DNA sequence from clone RP23-346D23 on chr... 40 7.6 
>dbj|AK109426.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E02, full
           insert sequence
          Length = 1013

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                       
Query: 75  gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 134
           ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||
Sbjct: 81  gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 140

                                                                       
Query: 135 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 194
           ||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| |||||
Sbjct: 141 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 200

                                                                       
Query: 195 catctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggg 254
           |||||||||||||||| |||| ||||| ||||||||||| | |||||||||||| |||||
Sbjct: 201 catctcctcccgcaagaagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggg 260

                                                                       
Query: 255 gatcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcat 314
           |||||| || || ||||  |||||||| ||||||| | | || ||||||||| |||||||
Sbjct: 261 gatcaccgtcgtcggggtggtctgccatgtctccatcccggagcagcgcaagaacctcat 320

                                                                       
Query: 315 cgacacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaa 374
           ||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| ||
Sbjct: 321 cgacacggcggtcaagaattttgggcatatcgacatagttgtctccaatgctgctgccaa 380

                                                                       
Query: 375 tccttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatat 434
           |||||| || |||| |||| |||| |||||||| ||  | |||||||| |||||||||||
Sbjct: 381 tccttccgtagataacatattagaaatgaaagagcctatccttgacaaactatgggatat 440

                                                                       
Query: 435 taatgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatc 494
           |||||| || |||||||||||||| || ||||| |||||  || ||||| ||||||||||
Sbjct: 441 taatgttaaggcatctattcttcttcttcaggatgctgctgcatatttgcggaagggatc 500

                                                                       
Query: 495 atctgtgataataatttcttcaattgctggctataatcctgaagcagctttatcgatgta 554
           ||| |||||| | |||||||||||| ||||||||||||| ||| |||| || ||||||||
Sbjct: 501 atccgtgatattgatttcttcaattactggctataatccagaaccagcattgtcgatgta 560

             
Query: 555 tg 556
           ||
Sbjct: 561 tg 562
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>dbj|AK073545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K02, full
           insert sequence
          Length = 1127

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                       
Query: 75  gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 134
           ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||
Sbjct: 173 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 232

                                                                       
Query: 135 cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 194
           ||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| |||||
Sbjct: 233 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 292

                                                                       
Query: 195 catctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggg 254
           |||||||||||||||| |||| ||||| ||||||||||| | |||||||||||| |||||
Sbjct: 293 catctcctcccgcaagaagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggg 352

                                                                       
Query: 255 gatcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcat 314
           |||||| || || ||||  |||||||| ||||||| | | || ||||||||| |||||||
Sbjct: 353 gatcaccgtcgtcggggtggtctgccatgtctccatcccggagcagcgcaagaacctcat 412

                                                                       
Query: 315 cgacacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaa 374
           ||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| ||
Sbjct: 413 cgacacggcggtcaagaattttgggcatatcgacatagttgtctccaatgctgctgccaa 472

                                                                       
Query: 375 tccttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatat 434
           |||||| || |||| |||| |||| |||||||| ||  | |||||||| |||||||||||
Sbjct: 473 tccttccgtagataacatattagaaatgaaagagcctatccttgacaaactatgggatat 532

                                                                       
Query: 435 taatgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatc 494
           |||||| || |||||||||||||| || ||||| |||||  || ||||| ||||||||||
Sbjct: 533 taatgttaaggcatctattcttcttcttcaggatgctgctgcatatttgcggaagggatc 592

                                                                       
Query: 495 atctgtgataataatttcttcaattgctggctataatcctgaagcagctttatcgatgta 554
           ||| |||||| | |||||||||||| ||||||||||||| ||| |||| || ||||||||
Sbjct: 593 atccgtgatattgatttcttcaattactggctataatccagaaccagcattgtcgatgta 652

             
Query: 555 tg 556
           ||
Sbjct: 653 tg 654
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>gb|AY105662.1| Zea mays PCO112379 mRNA sequence
          Length = 1142

 Score =  406 bits (205), Expect = e-110
 Identities = 394/457 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  cggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttcca 136
           |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 196 cggcgatggatgtcaagtgccggcgtctggaggggaaggtggccatcgtgacggcgtcca 255

                                                                       
Query: 137 cgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgtca 196
           ||  ||| ||||| ||||||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 256 cgatggggatcggcctcgccatcgccgagcgcctcggtctggagggcgccgccgtcgtca 315

                                                                       
Query: 197 tctcctcccgcaagcagaaaaacgtggacgaggcggtggagggcctcagggcaaagggga 256
           ||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||| |
Sbjct: 316 tctcctcccgcaagcagaagaacgtgaacgaggcggtggaggggctcagggccaagggta 375

                                                                       
Query: 257 tcactgttgtgggggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcg 316
           |||| |  || || |||||||||||||||||| ||||  | |||||||||  ||||||||
Sbjct: 376 tcaccgcggttggtgccgtctgccacgtctccgacgcacagcagcgcaagagcctcatcg 435

                                                                       
Query: 317 acacggccgtcaagaattttggacatattgatattgttgtctccaatgctgctgcaaatc 376
           | |||||||||||||  ||||| || || |||||| |||||||||||||||| |||||||
Sbjct: 436 agacggccgtcaagagctttgggcacatagatattcttgtctccaatgctgccgcaaatc 495

                                                                       
Query: 377 cttctgtggatagcatactagagatgaaagaaccagttcttgacaagctatgggatatta 436
           ||||||| ||||||||||| || ||||||||  | ||||| || ||||| ||||||||||
Sbjct: 496 cttctgtagatagcatacttgaaatgaaagagtctgttctcgataagctgtgggatatta 555

                                                                       
Query: 437 atgtcaaagcatctattcttctactgcaggacgctgcaccacatttgaggaagggatcat 496
           | ||||| || ||||| |||||  | ||||| ||||| || ||  |  ||||||| ||||
Sbjct: 556 acgtcaaggcttctatccttcttattcaggatgctgctcctcacctacggaaggggtcat 615

                                                
Query: 497 ctgtgataataatttcttcaattgctggctataatcc 533
           ||||||| || ||||||||||||||||| || |||||
Sbjct: 616 ctgtgattattatttcttcaattgctggttacaatcc 652
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  190 bits (96), Expect = 3e-45
 Identities = 126/136 (92%)
 Strand = Plus / Minus

                                                                           
Query: 75      gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 134
               ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||
Sbjct: 2463721 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 2463662

                                                                           
Query: 135     cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 194
               ||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| |||||
Sbjct: 2463661 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 2463602

                               
Query: 195     catctcctcccgcaag 210
               ||||||||||||||||
Sbjct: 2463601 catctcctcccgcaag 2463586



 Score =  123 bits (62), Expect = 7e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                           
Query: 329     agaattttggacatattgatattgttgtctccaatgctgctgcaaatccttctgtggata 388
               |||||||||| ||||| || || |||||||||||||||||||| |||||||| || ||||
Sbjct: 2462171 agaattttgggcatatcgacatagttgtctccaatgctgctgccaatccttccgtagata 2462112

                                                                           
Query: 389     gcatactagagatgaaagaaccagttcttgacaagctatgggatattaatgtcaaagcat 448
                |||| |||| |||||||| ||  | |||||||| ||||||||||||||||| || ||||
Sbjct: 2462111 acatattagaaatgaaagagcctatccttgacaaactatgggatattaatgttaaggcat 2462052

                         
Query: 449     ctattcttct 458
               ||||||||||
Sbjct: 2462051 ctattcttct 2462042



 Score =  105 bits (53), Expect = 2e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                           
Query: 210     gcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggggatcactgttgtggg 269
               |||||| ||||| ||||||||||| | |||||||||||| ||||||||||| || || ||
Sbjct: 2463516 gcagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggggatcaccgtcgtcgg 2463457

                                                                           
Query: 270     ggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcgacacggccgtcaa 329
               ||  |||||||| ||||||| | | || ||||||||| |||||||||||||||| |||||
Sbjct: 2463456 ggtggtctgccatgtctccatcccggagcagcgcaagaacctcatcgacacggcggtcaa 2463397

                
Query: 330     g 330
               |
Sbjct: 2463396 g 2463396



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                           
Query: 479     atttgaggaagggatcatctgtgataataatttcttcaattgctggctataatcctgaag 538
               ||||| ||||||||||||| |||||| | |||||||||||| ||||||||||||| ||| 
Sbjct: 2461922 atttgcggaagggatcatccgtgatattgatttcttcaattactggctataatccagaac 2461863

                                 
Query: 539     cagctttatcgatgtatg 556
               |||| || ||||||||||
Sbjct: 2461862 cagcattgtcgatgtatg 2461845



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                   
Query: 343     attgatattgttgtctccaatgctgctgcaaatcct 378
               |||||||||||||||||||||||| |||||||||||
Sbjct: 2462236 attgatattgttgtctccaatgctactgcaaatcct 2462201
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>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0095O23
          Length = 159792

 Score =  190 bits (96), Expect = 3e-45
 Identities = 126/136 (92%)
 Strand = Plus / Minus

                                                                          
Query: 75     gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 134
              ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||
Sbjct: 142131 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 142072

                                                                          
Query: 135    cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 194
              ||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| |||||
Sbjct: 142071 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 142012

                              
Query: 195    catctcctcccgcaag 210
              ||||||||||||||||
Sbjct: 142011 catctcctcccgcaag 141996



 Score =  123 bits (62), Expect = 7e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                          
Query: 329    agaattttggacatattgatattgttgtctccaatgctgctgcaaatccttctgtggata 388
              |||||||||| ||||| || || |||||||||||||||||||| |||||||| || ||||
Sbjct: 140581 agaattttgggcatatcgacatagttgtctccaatgctgctgccaatccttccgtagata 140522

                                                                          
Query: 389    gcatactagagatgaaagaaccagttcttgacaagctatgggatattaatgtcaaagcat 448
               |||| |||| |||||||| ||  | |||||||| ||||||||||||||||| || ||||
Sbjct: 140521 acatattagaaatgaaagagcctatccttgacaaactatgggatattaatgttaaggcat 140462

                        
Query: 449    ctattcttct 458
              ||||||||||
Sbjct: 140461 ctattcttct 140452



 Score =  105 bits (53), Expect = 2e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                          
Query: 210    gcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggggatcactgttgtggg 269
              |||||| ||||| ||||||||||| | |||||||||||| ||||||||||| || || ||
Sbjct: 141926 gcagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggggatcaccgtcgtcgg 141867

                                                                          
Query: 270    ggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcgacacggccgtcaa 329
              ||  |||||||| ||||||| | | || ||||||||| |||||||||||||||| |||||
Sbjct: 141866 ggtggtctgccatgtctccatcccggagcagcgcaagaacctcatcgacacggcggtcaa 141807

               
Query: 330    g 330
              |
Sbjct: 141806 g 141806



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                          
Query: 479    atttgaggaagggatcatctgtgataataatttcttcaattgctggctataatcctgaag 538
              ||||| ||||||||||||| |||||| | |||||||||||| ||||||||||||| ||| 
Sbjct: 140332 atttgcggaagggatcatccgtgatattgatttcttcaattactggctataatccagaac 140273

                                
Query: 539    cagctttatcgatgtatg 556
              |||| || ||||||||||
Sbjct: 140272 cagcattgtcgatgtatg 140255



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                  
Query: 343    attgatattgttgtctccaatgctgctgcaaatcct 378
              |||||||||||||||||||||||| |||||||||||
Sbjct: 140646 attgatattgttgtctccaatgctactgcaaatcct 140611
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>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score =  190 bits (96), Expect = 3e-45
 Identities = 126/136 (92%)
 Strand = Plus / Minus

                                                                         
Query: 75    gccggcgatggaggtcaagtgccggcgtctggaggggaaggtggccgtcgtgacggcttc 134
             ||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||
Sbjct: 50311 gccggcgatggaggtgaagtgccgtcggctggaggggaaggtagccgtcgtgacggcctc 50252

                                                                         
Query: 135   cacgcagggcatcggactcgccatcgccgagcgcctcggccgggagggtgccgcggtcgt 194
             ||||||||||||||| |||||||||||||||||||||||||  ||||| ||||| |||||
Sbjct: 50251 cacgcagggcatcggtctcgccatcgccgagcgcctcggcctcgagggcgccgccgtcgt 50192

                             
Query: 195   catctcctcccgcaag 210
             ||||||||||||||||
Sbjct: 50191 catctcctcccgcaag 50176



 Score =  123 bits (62), Expect = 7e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                         
Query: 329   agaattttggacatattgatattgttgtctccaatgctgctgcaaatccttctgtggata 388
             |||||||||| ||||| || || |||||||||||||||||||| |||||||| || ||||
Sbjct: 48761 agaattttgggcatatcgacatagttgtctccaatgctgctgccaatccttccgtagata 48702

                                                                         
Query: 389   gcatactagagatgaaagaaccagttcttgacaagctatgggatattaatgtcaaagcat 448
              |||| |||| |||||||| ||  | |||||||| ||||||||||||||||| || ||||
Sbjct: 48701 acatattagaaatgaaagagcctatccttgacaaactatgggatattaatgttaaggcat 48642

                       
Query: 449   ctattcttct 458
             ||||||||||
Sbjct: 48641 ctattcttct 48632



 Score =  105 bits (53), Expect = 2e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                         
Query: 210   gcagaaaaacgtggacgaggcggtggagggcctcagggcaaaggggatcactgttgtggg 269
             |||||| ||||| ||||||||||| | |||||||||||| ||||||||||| || || ||
Sbjct: 50106 gcagaagaacgtcgacgaggcggtcgtgggcctcagggcgaaggggatcaccgtcgtcgg 50047

                                                                         
Query: 270   ggccgtctgccacgtctccaacgccgaacagcgcaagcacctcatcgacacggccgtcaa 329
             ||  |||||||| ||||||| | | || ||||||||| |||||||||||||||| |||||
Sbjct: 50046 ggtggtctgccatgtctccatcccggagcagcgcaagaacctcatcgacacggcggtcaa 49987

              
Query: 330   g 330
             |
Sbjct: 49986 g 49986



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                         
Query: 479   atttgaggaagggatcatctgtgataataatttcttcaattgctggctataatcctgaag 538
             ||||| ||||||||||||| |||||| | |||||||||||| ||||||||||||| ||| 
Sbjct: 48512 atttgcggaagggatcatccgtgatattgatttcttcaattactggctataatccagaac 48453

                               
Query: 539   cagctttatcgatgtatg 556
             |||| || ||||||||||
Sbjct: 48452 cagcattgtcgatgtatg 48435



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                 
Query: 343   attgatattgttgtctccaatgctgctgcaaatcct 378
             |||||||||||||||||||||||| |||||||||||
Sbjct: 48826 attgatattgttgtctccaatgctactgcaaatcct 48791
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>gb|AF494368.1| Arabidopsis lyrata subsp. petraea short-chain alcohol dehydrogenase
           (SCADH) gene, partial cds
          Length = 1181

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174527.1| Arabidopsis lyrata subsp. lyrata isolate Mi9-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1150

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174526.1| Arabidopsis lyrata subsp. lyrata isolate MI9-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1150

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
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>gb|AY174525.1| Arabidopsis lyrata subsp. lyrata isolate Mi8-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
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>gb|AY174524.1| Arabidopsis lyrata subsp. lyrata isolate Mi8-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174523.1| Arabidopsis lyrata subsp. lyrata isolate Nc4-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
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>gb|AY174522.1| Arabidopsis lyrata subsp. lyrata isolate NC4-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174521.1| Arabidopsis lyrata subsp. lyrata isolate Nc3-2.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174520.1| Arabidopsis lyrata subsp. lyrata isolate Nc3-2.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
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>gb|AY174519.1| Arabidopsis lyrata subsp. lyrata isolate Nc2-2.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174518.1| Arabidopsis lyrata subsp. lyrata isolate Nc2-2.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174517.1| Arabidopsis lyrata subsp. lyrata isolate Nc1-7.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174516.1| Arabidopsis lyrata subsp. lyrata isolate NC1-7.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174507.1| Arabidopsis lyrata subsp. petraea isolate Sc17-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1148

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 525 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 580
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>gb|AY174506.1| Arabidopsis lyrata subsp. petraea isolate Sc14-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1148

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 525 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 580
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>gb|AY174504.1| Arabidopsis lyrata subsp. petraea isolate Sc14-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
to top
>gb|AY174502.1| Arabidopsis lyrata subsp. petraea isolate Sc15-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaaatcctctattcttct 602
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>ref|NM_116791.1| Arabidopsis thaliana oxidoreductase AT4G05530 mRNA, complete cds
          Length = 1123

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 392 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 451

                
Query: 463 cagga 467
           |||||
Sbjct: 452 cagga 456
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>gb|AY113900.1| Arabidopsis thaliana unknown protein (At4g05530) mRNA, complete cds
          Length = 796

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 325 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 384

                
Query: 463 cagga 467
           |||||
Sbjct: 385 cagga 389
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>gb|AY035106.1| Arabidopsis thaliana unknown protein (At4g05530) mRNA, complete cds
          Length = 1087

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 375 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 434

                
Query: 463 cagga 467
           |||||
Sbjct: 435 cagga 439
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>emb|BX826379.1|CNS0A2B1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB20ZA05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1101

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 380 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 439

                
Query: 463 cagga 467
           |||||
Sbjct: 440 cagga 444
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>gb|AY087807.1| Arabidopsis thaliana clone 38543 mRNA, complete sequence
          Length = 1123

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 392 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 451

                
Query: 463 cagga 467
           |||||
Sbjct: 452 cagga 456
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>dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39G20, TM0353a,
             complete sequence
          Length = 78736

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                         
Query: 350   ttgttgtctccaatgctgctgcaaatccttctgtggatagcatactagagatgaaagaac 409
             ||||||| |||||||||||||| ||||||||||| |||  ||| ||  | |  || ||  
Sbjct: 28127 ttgttgtgtccaatgctgctgcgaatccttctgttgatgccattctgcaaacaaaggaca 28186

                                                              
Query: 410   cagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
             | |||||||||||| ||||||| || ||||||||||| ||||| |||||
Sbjct: 28187 cggttcttgacaagttatgggagataaatgtcaaagcctctatacttct 28235
to top
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15
          Length = 199987

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 403    aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
              |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 155815 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 155874

                  
Query: 463    cagg 466
              ||||
Sbjct: 155875 cagg 155878
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>gb|AY174529.1| Arabidopsis thaliana isolate KNO10 short chain alcohol
           dehydrogenase (SCADH) gene, partial cds
          Length = 1363

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 710 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 769

               
Query: 463 cagg 466
           ||||
Sbjct: 770 cagg 773
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>gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24
          Length = 122529

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 403   aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttctactg 462
             |||||| | |||||||||||||| ||||| || ||||||||| | ||||| ||||| |||
Sbjct: 80054 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttctcctg 79995

                 
Query: 463   cagg 466
             ||||
Sbjct: 79994 cagg 79991
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>gb|AY174515.1| Arabidopsis lyrata subsp. petraea isolate Ic38-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
to top
>gb|AY174514.1| Arabidopsis lyrata subsp. petraea isolate Ic33-3.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
to top
>gb|AY174513.1| Arabidopsis lyrata short-chain alcohol dehydrogenase (SCADH) gene,
           partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
to top
>gb|AY174512.1| Arabidopsis lyrata subsp. petraea isolate Ic38-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
to top
>gb|AY174511.1| Arabidopsis lyrata subsp. petraea isolate Ic42-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1161

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 547 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 587
to top
>gb|AY174510.1| Arabidopsis lyrata subsp. petraea isolate Ic36-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
to top
>gb|AY174509.1| Arabidopsis lyrata subsp. petraea isolate Ic32-7.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
to top
>gb|AY174508.1| Arabidopsis lyrata subsp. petraea isolate Ic32-7.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
to top
>gb|AY174503.1| Arabidopsis lyrata subsp. petraea isolate Sc15-1.2 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaa 443
           |||||| | |||||||||||||||||||| || ||||||||
Sbjct: 556 aaagaagctgttcttgacaagctatgggaaatcaatgtcaa 596
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>emb|AL160408.24| Human DNA sequence from clone RP4-781K5 on chromosome 1q42.1-43,
            complete sequence
          Length = 132887

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 533  ctgaagcagctttatcgatgtatg 556
            ||||||||||||||||||||||||
Sbjct: 7820 ctgaagcagctttatcgatgtatg 7843
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>gb|AY174531.1| Arabidopsis thaliana isolate GOT16 short chain alcohol
           dehydrogenase (SCADH) gene, partial cds
          Length = 1359

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| |||||
Sbjct: 706 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttct 761
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>gb|AY174530.1| Arabidopsis thaliana isolate CIBC6 short chain alcohol
           dehydrogenase (SCADH) gene, partial cds
          Length = 1363

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| |||||
Sbjct: 710 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttct 765
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>gb|AY174528.1| Arabidopsis thaliana isolate PUZ16 short chain alcohol
           dehydrogenase (SCADH) gene, partial cds
          Length = 1358

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 403 aaagaaccagttcttgacaagctatgggatattaatgtcaaagcatctattcttct 458
           |||||| | |||||||||||||| ||||| || ||||||||| | ||||| |||||
Sbjct: 705 aaagaagctgttcttgacaagctttgggaaatcaatgtcaaatcctctatacttct 760
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>gb|AY174505.1| Arabidopsis lyrata subsp. petraea isolate Sc17-1.1 short-chain
           alcohol dehydrogenase (SCADH) gene, partial cds
          Length = 1170

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 412 gttcttgacaagctatgggatattaatgtcaa 443
           |||||||||||||||||||| || ||||||||
Sbjct: 565 gttcttgacaagctatgggaaatcaatgtcaa 596
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 152      tcgccatcgccgagcgcctcggcc 175
                ||||||||||||||||||||||||
Sbjct: 28377315 tcgccatcgccgagcgcctcggcc 28377292
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 152   tcgccatcgccgagcgcctcggcc 175
             ||||||||||||||||||||||||
Sbjct: 89893 tcgccatcgccgagcgcctcggcc 89870
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>dbj|AB025332.1| Lampetra reissneri mRNA for RNA polymerase II largest subunit,
            partial cds
          Length = 1785

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 309  cctcatcgacacggccgtcaaga 331
            |||||||||||||||||||||||
Sbjct: 1035 cctcatcgacacggccgtcaaga 1057
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>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183100

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 432    tattaatgtcaaagcatctatt 453
              ||||||||||||||||||||||
Sbjct: 148838 tattaatgtcaaagcatctatt 148859
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>gb|AF253049.1|AF253049 Echis coloratus clone EC3 phospholipase A2 gene, complete cds
          Length = 2163

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 189  ggtcgtcatctcctcccgcaagcaga 214
            |||||||| |||||||||||||||||
Sbjct: 1835 ggtcgtcacctcctcccgcaagcaga 1810
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>gb|DQ294585.1| Hyaloraphidium curvatum isolate AFTOL-ID-26 RNA polymerase II largest
            subunit (RPB1) gene, partial cds
          Length = 3303

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 310  ctcatcgacacggccgtcaaga 331
            ||||||||||||||||||||||
Sbjct: 2551 ctcatcgacacggccgtcaaga 2572
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 151   ctcgccatcgccgagcgcctcggcc 175
             ||||||||||||||||||| |||||
Sbjct: 84905 ctcgccatcgccgagcgccgcggcc 84881
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>gb|AC013265.7| Homo sapiens BAC clone RP11-197H3 from 2, complete sequence
          Length = 151721

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 536    aagcagctttatcgatgtatg 556
              |||||||||||||||||||||
Sbjct: 143119 aagcagctttatcgatgtatg 143099
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 111     gaaggtggccgtcgtgacggc 131
               |||||||||||||||||||||
Sbjct: 2499259 gaaggtggccgtcgtgacggc 2499239
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>ref|XM_479614.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 98  ggcgtctggaggggaaggtggccgtcgt 125
           |||| |||||||||||||||||| ||||
Sbjct: 195 ggcggctggaggggaaggtggccatcgt 222
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>gb|AY650399.1| Homo sapiens cell division cycle 34 (CDC34) gene, complete cds
          Length = 14358

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 159  cgccgagcgcctcggccgggaggg 182
            ||||||||||||| ||||||||||
Sbjct: 1845 cgccgagcgcctccgccgggaggg 1822
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>ref|NM_131802.1| Danio rerio ceruloplasmin (cp), mRNA
          Length = 3370

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  gcaagcagaaaaacgtggac 225
            ||||||||||||||||||||
Sbjct: 1770 gcaagcagaaaaacgtggac 1789
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>gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete sequence
          Length = 115040

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    tttggacatattgatattgt 353
              ||||||||||||||||||||
Sbjct: 106508 tttggacatattgatattgt 106527
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>emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chromosome 13 Contains an
             olfactory receptor pseudogene,  a novel gene (RGC32), the
             3' end of a novel gene (contains KIAA0564 and FLJ21779)
             possible ortholog of RIKEN cDNA 1300010F03 gene, and 2 CpG
             islands, complete sequence
          Length = 158871

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   gcaccacatttgaggaaggg 491
             ||||||||||||||||||||
Sbjct: 87231 gcaccacatttgaggaaggg 87250
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>gb|BC048037.1| Danio rerio ceruloplasmin, mRNA (cDNA clone MGC:55445 IMAGE:2639683),
            complete cds
          Length = 3370

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  gcaagcagaaaaacgtggac 225
            ||||||||||||||||||||
Sbjct: 1770 gcaagcagaaaaacgtggac 1789
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>gb|BC064000.1| Danio rerio ceruloplasmin, mRNA (cDNA clone MGC:77935 IMAGE:7000725),
            complete cds
          Length = 3356

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  gcaagcagaaaaacgtggac 225
            ||||||||||||||||||||
Sbjct: 1758 gcaagcagaaaaacgtggac 1777
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>gb|AC011556.9| Homo sapiens chromosome 19 clone LLNLR-281B11, complete sequence
          Length = 32074

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 159 cgccgagcgcctcggccgggaggg 182
           ||||||||||||| ||||||||||
Sbjct: 59  cgccgagcgcctccgccgggaggg 36
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>gb|AE005855.1| Caulobacter crescentus CB15 section 181 of 359 of the complete
           genome
          Length = 11352

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 139 cagggcatcggactcgccatcgccgagcgcct 170
           ||||||||||| | |||||||| |||||||||
Sbjct: 120 cagggcatcgggcgcgccatcgtcgagcgcct 151
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>gb|AC026806.5| Homo sapiens chromosome 19 clone LLNLR-271E7, complete sequence
          Length = 36114

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   accacatttgaggaagggat 493
             ||||||||||||||||||||
Sbjct: 17145 accacatttgaggaagggat 17164
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>gb|AY129330.1| Mycobacteriopahge Che8, complete sequence
          Length = 59471

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   cgcaagcacctcatcgacac 320
             ||||||||||||||||||||
Sbjct: 26199 cgcaagcacctcatcgacac 26218
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>gb|AF336125.1|AF336125 Danio rerio ceruloplasmin mRNA, partial cds
          Length = 1971

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 gcaagcagaaaaacgtggac 225
           ||||||||||||||||||||
Sbjct: 362 gcaagcagaaaaacgtggac 381
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 98       ggcgtctggaggggaaggtggccgtcgt 125
                |||| |||||||||||||||||| ||||
Sbjct: 29365336 ggcggctggaggggaaggtggccatcgt 29365309
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>gb|AE004956.1| Pseudomonas aeruginosa PAO1, section 517 of 529 of the complete
            genome
          Length = 11660

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   cggcgaggccggcgatggag 87
            ||||||||||||||||||||
Sbjct: 8749 cggcgaggccggcgatggag 8730
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>gb|AC011531.7|AC011531 Homo sapiens chromosome 19 clone LLNLR-231G5, complete sequence
          Length = 36377

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 159   cgccgagcgcctcggccgggaggg 182
             ||||||||||||| ||||||||||
Sbjct: 21066 cgccgagcgcctccgccgggaggg 21043
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    ctcgccatcgccgagcgcct 170
              ||||||||||||||||||||
Sbjct: 908547 ctcgccatcgccgagcgcct 908566
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>dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B21, full
           insert sequence
          Length = 1221

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 98  ggcgtctggaggggaaggtggccgtcgt 125
           |||| |||||||||||||||||| ||||
Sbjct: 195 ggcggctggaggggaaggtggccatcgt 222
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 98    ggcgtctggaggggaaggtggccgtcgt 125
             |||| |||||||||||||||||| ||||
Sbjct: 28258 ggcggctggaggggaaggtggccatcgt 28231
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>gb|U89712.1|RGU89712 Rhodococcus globerulus hpp operon, 3-(3-hydroxyphenyl) propionate
            hydroxylase (hppA), 2-hydroxy-6-ketonona-2,4-dienoate
            hydrolase (hppC), 2,3-dihydroxyphenylpropionate
            1,2-dioxygenase (hppB), putative 3-(3-hydroxyphenyl)
            propionate transport protein (hppK) and putative
            regulatory protein (hppR) genes, complete cds
          Length = 6040

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 311  tcatcgacacggccgtcaag 330
            ||||||||||||||||||||
Sbjct: 3536 tcatcgacacggccgtcaag 3555
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>emb|AL844578.4| Mouse DNA sequence from clone RP23-346D23 on chromosome 4, complete
             sequence
          Length = 20714

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   tggagggcctcagggcaaag 252
             ||||||||||||||||||||
Sbjct: 15344 tggagggcctcagggcaaag 15325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,394,142
Number of Sequences: 3902068
Number of extensions: 4394142
Number of successful extensions: 98469
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97614
Number of HSP's gapped (non-prelim): 854
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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